14,761 results on '"Cummings P"'
Search Results
52. Clinical Meaningfulness in Alzheimer’s Disease Clinical Trials. A Report from the EU-US CTAD Task Force
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Angioni, D., Cummings, J., Lansdall, C. J., Middleton, L., Sampaio, C., Gauthier, S., Cohen, S., Petersen, R. C., Rentz, D. M., Wessels, A. M., Hendrix, S. B., Jessen, F., Carrillo, M. C., Doody, R. S., Irizarry, M., Andrews, J. S., Vellas, B., Aisen, P., Andrieu, Sandrine, Bateman, Randall, Batrla, Richard, Bell, Joanne, Bosson, Oskar, Bozeat, Sasha, Brooks, Dawn, Haeberlein, Samantha Budd, Buracchio, Teresa, Cho, Min, Choung, Matthew, Cook, Gavin, Crisitello, Darrin, Dangond, Fernando, de Santi, Susan, Dennehy, Ellen, Dhadda, Shobha, Dhillon, Harjeet, Dunn, Billy, Egan, Michael, Elwood, Fiona, Eriksson, Sven, Fagan, Tom, Fillit, Howard, Freskgard, Per-Ola, Gallagher, Diana, Gangi, Gopi, Granda, Carlos, Greeley, David, Gronblad, Anna-Kaija, Hampel, Harald, Hawthorne, Paul, Henley, David, Herring, Joe, Hersch, Steve, Holt, Bill, Iwatsubo, Takeshi, Jones, Daryl, Kahl, Anja, Kinney, Gene, Kolb, Hartmuth, Kramer, Lynn, Kulic, Luka, Kumar, Sanjay, Lannfelt, Lars, Lawson, John, Legrand, Valérie, Lenington, Rachel, Longo, Frank, Matthews, Brandy, Masterman, Donna, McLinden, Kristina, Mikels, Sarah, Miller, Michael, Mintun, Mark, Moebius, Hans, Monteiro, Cecilia, Morken, Mario, Murphy, Jennifer, Odergren, Tomas, Osswald, Gunilla, Parnas, Laura, Patru, Maria-Magdalena, Prazma, Charlene, Raman, Rema, Reyderman, Larisa, Rogers, Sharon, Roman, Lise, Romano, Gary, Roskey, Mark, Rubino, Ivana, Ryan, Laurie, Salloway, Stephen, Schindler, Rachel, Schneider, Lon, Scott, David, Sims, John, Skovronsky, Daniel, Soto, Marion, Sperling, Reisa, Steukers, Lennert, Stoops, Erik, Strittmatter, Stephen, Tahami, Amir, Tamagnan, Gilles, Tariot, Gilles, Toloue, Masoud, Touchon, Jacques, Vanmechelen, Eugeen, Walt, Len, Weinberg, Mark, Weiner, Michael, White, Anne, Wiesel, Iris, Wilson, David, Yarenis, Lisa, Zago, Wagner, and Zhou, Jin
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- 2024
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53. The AlzMatch Pilot Study - Feasibility of Remote Blood Collection of Plasma Biomarkers for Preclinical Alzheimer’s Disease Trials
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Walter, Sarah, Langford, O., Jimenez-Maggiora, G. A., Abdel-Latif, S., Rissman, R. A., Grill, J. D., Karlawish, J., Atri, A., Bruschi, S., Hussen, K., Donohue, M. C., Marshall, G. A., Jicha, G., Racke, M., Turner, R. S., van Dyck, C. H., Venkatesh, V., Yarasheski, K. E., Sperling, R., Cummings, J., Aisen, P. S., and Raman, R.
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- 2024
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54. A randomised, crossover trial exploring the patient perspective and effectiveness of biosimilar adalimumab transition: IBD reference and biosimilar adalimumab cross over study (iBaSS)
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Young, David, Harris, Clare, Rahmany, Sohail, Iria, Inês, Gonçalves, João, Addison, Janet, Harvey, Justin, Latter, Sue, and Cummings, Fraser
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- 2024
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55. Increases in regional brain volume across two native South American male populations
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Chaudhari, Nikhil N., Imms, Phoebe E., Chowdhury, Nahian F., Gatz, Margaret, Trumble, Benjamin C., Mack, Wendy J., Law, E. Meng, Sutherland, M. Linda, Sutherland, James D., Rowan, Christopher J., Wann, L. Samuel, Allam, Adel H., Thompson, Randall C., Michalik, David E., Miyamoto, Michael, Lombardi, Guido, Cummings, Daniel K., Seabright, Edmond, Alami, Sarah, Garcia, Angela R., Rodriguez, Daniel E., Gutierrez, Raul Quispe, Copajira, Adrian J., Hooper, Paul L., Buetow, Kenneth H., Stieglitz, Jonathan, Gurven, Michael D., Thomas, Gregory S., Kaplan, Hillard S., Finch, Caleb E., and Irimia, Andrei
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- 2024
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56. Multifunctional hybrid composites from novel asphaltene-based carbon nanofiber mats and woven carbon fiber
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Hussain, Atif, Keyvani, Parya, Cummings, Rachel, Karaaslan, Muzaffer, Bahi, Addie, Renneckar, Scott, Ko, Frank, and Abdin, Yasmine
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- 2024
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57. Antarctic benthic ecological change
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Griffiths, Huw J., Cummings, Vonda J., Van de Putte, Anton, Whittle, Rowan J., and Waller, Catherine L.
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- 2024
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58. Bariatric Surgery Is Associated with Lower Concentrations of Fecal Secondary Bile Acids and Their Metabolizing Microbial Enzymes: A Pilot Study
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Hussan, Hisham, Ali, Mohamed R., Lyo, Victoria, Webb, Amy, Pietrzak, Maciej, Zhu, Jiangjiang, Choueiry, Fouad, Li, Hong, Cummings, Bethany P., Marco, Maria L., Medici, Valentina, and Clinton, Steven K.
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- 2024
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59. A Method to Redesign and Simplify Schedules of Assessment and Quantify the Impacts. Applications to Merck Protocols
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Cummings, Steven R., Chetham, Scott, and Lee, Andy
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- 2024
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60. Targeting Self-Regulation to Reduce Internalizing Problems in Children: The Predictive Effect of Resilience
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Rich, Brendan A., Jessani, Zohaib, Cummings, Colleen M., Starin, Nina S., and Alvord, Mary K.
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- 2024
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61. First measurement of the yield of $^8$He isotopes produced in liquid scintillator by cosmic-ray muons at Daya Bay
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Daya Bay Collaboration, An, F. P., Bai, W. D., Balantekin, A. B., Bishai, M., Blyth, S., Cao, G. F., Cao, J., Chang, J. F., Chang, Y., Chen, H. S., Chen, H. Y., Chen, S. M., Chen, Y., Chen, Y. X., Chen, Z. Y., Cheng, J., Cheng, Y. C., Cheng, Z. K., Cherwinka, J. J., Chu, M. C., Cummings, J. P., Dalager, O., Deng, F. S., Ding, X. Y., Ding, Y. Y., Diwan, M. V., Dohnal, T., Dolzhikov, D., Dove, J., Dugas, K. V., Duyang, H. Y., Dwyer, D. A., Gallo, J. P., Gonchar, M., Gong, G. H., Gong, H., Gu, W. Q., Guo, J. Y., Guo, L., Guo, X. H., Guo, Y. H., Guo, Z., Hackenburg, R. W., Han, Y., Hans, S., He, M., Heeger, K. M., Heng, Y. K., Hor, Y. K., Hsiung, Y. B., Hu, B. Z., Hu, J. R., Hu, T., Hu, Z. J., Huang, H. X., Huang, J. H., Huang, X. T., Huang, Y. B., Huber, P., Jaffe, D. E., Jen, K. L., Ji, X. L., Ji, X. P., Johnson, R. A., Jones, D., Kang, L., Kettell, S. H., Kohn, S., Kramer, M., Langford, T. J., Lee, J., Lee, J. H. C., Lei, R. T., Leitner, R., Leung, J. K. C., Li, F., Li, H. L., Li, J. J., Li, Q. J., Li, R. H., Li, S., Li, S. C., Li, W. D., Li, X. N., Li, X. Q., Li, Y. F., Li, Z. B., Liang, H., Lin, C. J., Lin, G. L., Lin, S., Ling, J. J., Link, J. M., Littenberg, L., Littlejohn, B. R., Liu, J. C., Liu, J. L., Liu, J. X., Lu, C., Lu, H. Q., Luk, K. B., Ma, B. Z., Ma, X. B., Ma, X. Y., Ma, Y. Q., Mandujano, R. C., Marshall, C., McDonald, K. T., McKeown, R. D., Meng, Y., Napolitano, J., Naumov, D., Naumova, E., Nguyen, T. M. T., Ochoa-Ricoux, J. P., Olshevskiy, A., Park, J., Patton, S., Peng, J. C., Pun, C. S. J., Qi, F. Z., Qi, M., Qian, X., Raper, N., Ren, J., Reveco, C. Morales, Rosero, R., Roskovec, B., Ruan, X. C., Russell, B., Steiner, H., Sun, J. L., Tmej, T., Tse, W. -H., Tull, C. E., Tung, Y. C., Viren, B., Vorobel, V., Wang, C. H., Wang, J., Wang, M., Wang, N. Y., Wang, R. G., Wang, W., Wang, X., Wang, Y. F., Wang, Z., Wang, Z. M., Wei, H. Y., Wei, L. H., Wei, W., Wen, L. J., Whisnant, K., White, C. G., Wong, H. L. H., Worcester, E., Wu, D. R., Wu, Q., Wu, W. J., Xia, D. M., Xie, Z. Q., Xing, Z. Z., Xu, H. K., Xu, J. L., Xu, T., Xue, T., Yang, C. G., Yang, L., Yang, Y. Z., Yao, H. F., Ye, M., Yeh, M., Young, B. L., Yu, H. Z., Yu, Z. Y., Yue, B. B., Zavadskyi, V., Zeng, S., Zeng, Y., Zhan, L., Zhang, C., Zhang, F. Y., Zhang, H. H., Zhang, J. L., Zhang, J. W., Zhang, Q. M., Zhang, S. Q., Zhang, X. T., Zhang, Y. M., Zhang, Y. X., Zhang, Y. Y., Zhang, Z. J., Zhang, Z. P., Zhang, Z. Y., Zhao, J., Zhao, R. Z., Zhou, L., Zhuang, H. L., and Zou, J. H.
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Nuclear Experiment ,High Energy Physics - Experiment - Abstract
Daya Bay presents the first measurement of cosmogenic $^8$He isotope production in liquid scintillator, using an innovative method for identifying cascade decays of $^8$He and its child isotope, $^8$Li. We also measure the production yield of $^9$Li isotopes using well-established methodology. The results, in units of 10$^{-8}\mu^{-1}$g$^{-1}$cm$^{2}$, are 0.307$\pm$0.042, 0.341$\pm$0.040, and 0.546$\pm$0.076 for $^8$He, and 6.73$\pm$0.73, 6.75$\pm$0.70, and 13.74$\pm$0.82 for $^9$Li at average muon energies of 63.9~GeV, 64.7~GeV, and 143.0~GeV, respectively. The measured production rate of $^8$He isotopes is more than an order of magnitude lower than any other measurement of cosmogenic isotope production. It replaces the results of previous attempts to determine the ratio of $^8$He to $^9$Li production that yielded a wide range of limits from 0 to 30\%. The results provide future liquid-scintillator-based experiments with improved ability to predict cosmogenic backgrounds.
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- 2024
62. Deviated Fixed-route Microtransit: Design and Operations
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Cummings, Kayla, Jacquillat, Alexandre, and Martin-Iradi, Bernardo
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Mathematics - Optimization and Control - Abstract
Microtransit offers opportunities to enhance urban mobility by combining the reliability of public transit and the flexibility of ride-sharing. This paper optimizes the design and operations of a deviated fixed-route microtransit system that relies on reference lines but is allowed to deviate in response to passenger demand. We formulate a Microtransit Network Design (MiND) model via two-stage stochastic optimization. The model features a tight second-stage formulation thanks to a subpath-based representation of microtransit operations in a load-expanded network, which optimizes on-demand deviations between checkpoint stops. We develop a double-decomposition algorithm combining Benders decomposition and subpath-based column generation armed with a tailored label-setting algorithm. Using real-world data from Manhattan, results suggest that our method scales to large practical instances, with up to 10-100 candidate lines and hundreds of stations. Comparisons with transit and ride-sharing benchmarks suggest that microtransit can provide win-win outcomes toward efficient mobility (high demand coverage, low operating costs, high level of service), equitable mobility (broad geographic reach) and sustainable mobility (limited environmental footprint). We provide an open-source implementation in an online repository to enable replication.
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- 2024
63. Exoplanet Analog Observations of Earth from Galileo Disk-integrated Photometry
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Strauss, Ryder H., Robinson, Tyler D., Trilling, David E., Cummings, Ryan, and Smith, Christopher J.
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Astrophysics - Earth and Planetary Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
The Galileo spacecraft had distant encounters with Earth in 1990 and 1992. Limited Solid State Imager (SSI) data acquired during these encounters has been previously presented, but the majority of the data from these Earth flybys have not been presented in the literature. Observations of Earth taken from afar are both rare and directly relevant to the development of any future exo-Earth direct imaging mission. Here we present a pipeline that vets, calibrates, and measures the disk-integrated brightness of the Earth, in multiple filters, from the complete SSI data sets from both the 1990 and 1992 Galileo flybys. The result is over 1500 usable photometric measurements for Earth as an analog for an exoplanet. The 1990 data set includes full rotational lightcurves in six bandpasses spanning the optical range. The 1992 data set is more limited, with lightcurves only spanning 14 hr. Time-averaged photometry for both encounters is presented while variability and color are discussed relative to findings from NASA's EPOXI mission (which also provided photometric lighturves for Earth). The new Galileo/SSI data are used to further validate the Virtual Planetary Laboratory 3D spectral Earth model, which often serves as a stand-in for true disk-integrated observations of our planet. The revived Galileo/SSI data for Earth is a testament to the ability of NASA's Planetary Data System to maintain data over decades-long timescales. The disk-integrated products derived from these data add to a very short list of calibrated and published whole-disk observations of the Pale Blue Dot.
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- 2024
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64. Correlation of Coronal Mass Ejection Shock Temperature with Solar Energetic Particle Intensity
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Cuesta, Manuel Enrique, McComas, D. J., Khoo, L. Y., Bandyopadhyay, R., Sharma, T., Shen, M. M., Rankin, J. S., Cummings, A. T., Szalay, J. R., Cohen, C. M. S., Schwadron, N. A., Chhiber, R., Pecora, F., Matthaeus, W. H., Leske, R. A., and Stevens, M. L.
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Physics - Space Physics ,Astrophysics - Solar and Stellar Astrophysics - Abstract
Solar energetic particle (SEP) events have been observed by the Parker Solar Probe (PSP) spacecraft since its launch in 2018. These events include sources from solar flares and coronal mass ejections (CMEs). Onboard PSP is the IS\(\odot\)IS instrument suite measuring ions over energies from ~ 20 keV/nucleon to 200 MeV/nucleon and electrons from ~ 20 keV to 6 MeV. Previous studies sought to group CME characteristics based on their plasma conditions and arrived at general descriptions with large statistical errors, leaving open questions on how to properly group CMEs based solely on their plasma conditions. To help resolve these open questions, plasma properties of CMEs have been examined in relation to SEPs. Here we reexamine one plasma property, the solar wind proton temperature, and compare it to the proton SEP intensity in a region immediately downstream of a CME-driven shock for seven CMEs observed at radial distances within 1 au. We find a statistically strong correlation between proton SEP intensity and bulk proton temperature, indicating a clear relationship between SEPs and the conditions in the solar wind. Furthermore, we propose that an indirect coupling of SEP intensity to the level of turbulence and the amount of energy dissipation that results is mainly responsible for the observed correlation between SEP intensity and proton temperature. These results are key to understanding the interaction of SEPs with the bulk solar wind in CME-driven shocks and will improve our ability to model the interplay of shock evolution and particle acceleration., Comment: 12 pages, 4 figures, and 2 tables
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- 2024
65. Integrating Differential Privacy and Contextual Integrity
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Benthall, Sebastian and Cummings, Rachel
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Computer Science - Cryptography and Security ,Computer Science - Computers and Society - Abstract
In this work, we propose the first framework for integrating Differential Privacy (DP) and Contextual Integrity (CI). DP is a property of an algorithm that injects statistical noise to obscure information about individuals represented within a database. CI defines privacy as information flow that is appropriate to social context. Analyzed together, these paradigms outline two dimensions on which to analyze privacy of information flows: descriptive and normative properties. We show that our new integrated framework provides benefits to both CI and DP that cannot be attained when each definition is considered in isolation: it enables contextually-guided tuning of the epsilon parameter in DP, and it enables CI to be applied to a broader set of information flows occurring in real-world systems, such as those involving PETs and machine learning. We conclude with a case study based on the use of DP in the U.S. Census Bureau., Comment: Published in Proceedings of 3rd ACM Computer Science And Law Symposium, 2024
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- 2024
66. Disorder-Induced Delocalization in Magic-Angle Twisted Bilayer Graphene
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Guerrero, Pedro Alcázar, Nguyen, Viet-Hung, Romeral, Jorge Martínez, Cummings, Aron W., Garcia, José-Hugo, Charlier, Jean-Christophe, and Roche, Stephan
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Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
Flat bands in moir\'e systems are exciting new playgrounds for the generation and study of exotic many-body physics phenomena in low-dimensional materials. Such physics is attributed to the vanishing kinetic energy and strong spatial localization of the flat-band states. Here we use numerical simulations to examine the electronic transport properties of such flat bands in magic-angle twisted bilayer graphene in the presence of disorder. We find that while a conventional downscaling of the mean free path with increasing disorder strength occurs at higher energies, in the flat bands the mean free path can actually increase with increasing disorder strength.This phenomenon is also captured by the disorder-dependent quantum metric, which is directly linked to the ground state localization.This disorder-induced delocalization suggests that weak disorder may have a strong impact on the exotic physics of magic-angle bilayer graphene and other related moir\'e systems., Comment: Main text: 7 pages, 4 figures. Sup .Mat.: 4 pages, 2 figures
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- 2024
67. EUSO-SPB1 Mission and Science
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Collaboration, JEM-EUSO, Abdellaoui, G., Abe, S., Adams. Jr., J. H., Allard, D., Alonso, G., Anchordoqui, L., Anzalone, A., Arnone, E., Asano, K., Attallah, R., Attoui, H., Pernas, M. Ave, Bachmann, R., Bacholle, S., Bagheri, M., Bakiri, M., Baláz, J., Barghini, D., Bartocci, S., Battisti, M., Bayer, J., Beldjilali, B., Belenguer, T., Belkhalfa, N., Bellotti, R., Belov, A. A., Benmessai, K., Bertaina, M., Bertone, P. F., Biermann, P. L., Bisconti, F., Blaksley, C., Blanc, N., Blin-Bondil, S., Bobik, P., Bogomilov, M., Bolmgren, K., Bozzo, E., Briz, S., Bruno, A., Caballero, K. S., Cafagna, F., Cambié, G., Campana, D., Capdevielle, J. N., Capel, F., Caramete, A., Caramete, L., Caruso, R., Casolino, M., Cassardo, C., Castellina, A., Catalano, O., Cellino, A., Černý, K., Chikawa, M., Chiritoi, G., Christl, M. J., Colalillo, R., Conti, L., Cotto, G., Crawford, H. J., Cremonini, R., Creusot, A., Cummings, A., Gónzalez, A. de Castro, de la Taille, C., del Peral, L., Desiato, J., Damian, A. Diaz, Diesing, R., Dinaucourt, P., Djakonow, A., Djemil, T., Ebersoldt, A., Ebisuzaki, T., Eser, J., Fenu, F., Fernández-González, S., Ferrarese, S., Filippatos, G., Finch, W., Fornaro, C., Fouka, M., Franceschi, A., Franchini, S., Fuglesang, C., Fujii, T., Fukushima, M., Galeotti, P., García-Ortega, E., Gardiol, D., Garipov, G. K., Gascón, E., Gazda, E., Genci, J., Golzio, A., Gorodetzky, P., Gregg, R., Green, A., Guarino, F., Guépin, C., Guzmán, A., Hachisu, Y., Haungs, A., Heigbes, T., Carretero, J. Hernández, Hulett, L., Ikeda, D., Inoue, N., Inoue, S., Isgrò, F., Itow, Y., Jammer, T., Jeong, S., Jochum, J., Joven, E., Judd, E. G., Jung, A., Kajino, F., Kajino, T., Kalli, S., Kaneko, I., Kasztelan, M., Katahira, K., Kawai, K., Kawasaki, Y., Kedadra, A., Khales, H., Khrenov, B. A., Kim, Jeong-Sook, Kim, Soon-Wook, Kleifges, M., Klimov, P. A., Kreykenbohm, I., Krizmanic, J. F., Królik, K., Kungel, V., Kurihara, Y., Kusenko, A., Kuznetsov, E., Lahmar, H., Lakhdari, F., Licandro, J., Campano, L. López, Martínez, F. López, Mackovjak, S., Mahdi, M., Mandát, D., Manfrin, M., Marcelli, L., Marcos, J. L., Marszał, W., Martín, Y., Martinez, O., Mase, K., Mastafa, M., Matthews, J. N., Mebarki, N., Medina-Tanco, G., Menshikov, A., Merino, A., Mese, M., Meseguer, J., Meyer, S. S., Mimouni, J., Miyamoto, H., Mizumoto, Y., Monaco, A., Ríos, J. A. Morales de los, Nachtman, J. M., Nagataki, S., Naitamor, S., Napolitano, T., Neronov, A., Nomoto, K., Nonaka, T., Ogawa, T., Ogio, S., Ohmori, H., Olinto, A. V., Onel, Y., Osteria, G., Otte, A. N., Pagliaro, A., Painter, W., Panasyuk, M. I., Panico, B., Parizot, E., Park, I. H., Pastircak, B., Paul, T., Pech, M., Pérez-Grande, I., Perfetto, F., Peter, T., Picozza, P., Pindado, S., Piotrowski, L. W., Piraino, S., Plebaniak, Z., Pollini, A., Popescu, E. M., Prevete, R., Prévôt, G., Prieto, H., Przybylak, M., Puehlhofer, G., Putis, M., Reardon, P., Reno, M. H., Reyes, M., Ricci, M., Frías, M. D. Rodríguez, Matamala, O. F. Romero, Ronga, F., Sabau, M. D., Saccá, G., Sagawa, H., Sahnoune, Z., Saito, A., Sakaki, N., Salazar, H., Sánchez, J. L., Balanzar, J. C. Sanchez, Santangelo, A., Sanz-Andrés, A., Saprykin, O. A., Sarazin, F., Sato, M., Scagliola, A., Schanz, T., Schieler, H., Schovánek, P., Scotti, V., Serra, M., Sharakin, S. A., Shimizu, H. M., Shinozaki, K., Soriano, J. F., Sotgiu, A., Stan, I., Strharský, I., Sugiyama, N., Supanitsky, D., Suzuki, M., Szabelski, J., Tajima, N., Tajima, T., Takahashi, Y., Takeda, M., Takizawa, Y., Talai, M. C., Tameda, Y., Tenzer, C., Thomas, S. B., Tibolla, O., Tkachev, L. G., Tomida, T., Tone, N., Toscano, S., Traïche, M., Tsunesada, Y., Tsuno, K., Turriziani, S., Uchihori, Y., Valdés-Galicia, J. F., Vallania, P., Valore, L., Vankova-Kirilova, G., Venters, T. M., Vigorito, C., Villaseñor, L., Vlcek, B., von Ballmoos, P., Vrabel, M., Wada, S., Watanabe, J., Watts. Jr., J., Muñoz, R. Weigand, Weindl, A., Wiencke, L., Wille, M., Wilms, J., Yamamoto, T., Yang, J., Yano, H., Yashin, I. V., Yonetoku, D., Yoshida, S., Young, R., Zgura, I. S., Zotov, M. Yu., and Marchi, A. Zuccaro
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - High Energy Astrophysical Phenomena - Abstract
The Extreme Universe Space Observatory on a Super Pressure Balloon 1 (EUSO-SPB1) was launched in 2017 April from Wanaka, New Zealand. The plan of this mission of opportunity on a NASA super pressure balloon test flight was to circle the southern hemisphere. The primary scientific goal was to make the first observations of ultra-high-energy cosmic-ray extensive air showers (EASs) by looking down on the atmosphere with an ultraviolet (UV) fluorescence telescope from suborbital altitude (33~km). After 12~days and 4~hours aloft, the flight was terminated prematurely in the Pacific Ocean. Before the flight, the instrument was tested extensively in the West Desert of Utah, USA, with UV point sources and lasers. The test results indicated that the instrument had sensitivity to EASs of approximately 3 EeV. Simulations of the telescope system, telescope on time, and realized flight trajectory predicted an observation of about 1 event assuming clear sky conditions. The effects of high clouds were estimated to reduce this value by approximately a factor of 2. A manual search and a machine-learning-based search did not find any EAS signals in these data. Here we review the EUSO-SPB1 instrument and flight and the EAS search., Comment: 18 pages, 19 figures
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- 2024
- Full Text
- View/download PDF
68. Charged-current non-standard neutrino interactions at Daya Bay
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Daya Bay collaboration, An, F. P., Bai, W. D., Balantekin, A. B., Bishai, M., Blyth, S., Cao, G. F., Cao, J., Chang, J. F., Chang, Y., Chen, H. S., Chen, H. Y., Chen, S. M., Chen, Y., Chen, Y. X., Chen, Z. Y., Cheng, J., Cheng, Y. C., Cheng, Z. K., Cherwinka, J. J., Chu, M. C., Cummings, J. P., Dalager, O., Deng, F. S., Ding, X. Y., Ding, Y. Y., Diwan, M. V., Dohnal, T., Dolzhikov, D., Dove, J., Dugas, K. V., Duyang, H. Y., Dwyer, D. A., Gallo, J. P., Gonchar, M., Gong, G. H., Gong, H., Gu, W. Q., Guo, J. Y., Guo, L., Guo, X. H., Guo, Y. H., Guo, Z., Hackenburg, R. W., Han, Y., Hans, S., He, M., Heeger, K. M., Heng, Y. K., Hor, Y. K., Hsiung, Y. B., Hu, B. Z., Hu, J. R., Hu, T., Hu, Z. J., Huang, H. X., Huang, J. H., Huang, X. T., Huang, Y. B., Huber, P., Jaffe, D. E., Jen, K. L., Ji, X. L., Ji, X. P., Johnson, R. A., Jones, D., Kang, L., Kettell, S. H., Kohn, S., Kramer, M., Langford, T. J., Lee, J., Lee, J. H. C., Lei, R. T., Leitner, R., Leung, J. K. C., Li, F., Li, H. L., Li, J. J., Li, Q. J., Li, R. H., Li, S., Li, S. C., Li, W. D., Li, X. N., Li, X. Q., Li, Y. F., Li, Z. B., Liang, H., Lin, C. J., Lin, G. L., Lin, S., Ling, J. J., Link, J. M., Littenberg, L., Littlejohn, B. R., Liu, J. C., Liu, J. L., Liu, J. X., Lu, C., Lu, H. Q., Luk, K. B., Ma, B. Z., Ma, X. B., Ma, X. Y., Ma, Y. Q., Mandujano, R. C., Marshall, C., McDonald, K. T., McKeown, R. D., Meng, Y., Napolitano, J., Naumov, D., Naumova, E., Nguyen, T. M. T., Ochoa-Ricoux, J. P., Olshevskiy, A., Park, J., Patton, S., Peng, J. C., Pun, C. S. J., Qi, F. Z., Qi, M., Qian, X., Raper, N., Ren, J., Reveco, C. Morales, Rosero, R., Roskovec, B., Ruan, X. C., Russell, B., Steiner, H., Sun, J. L., Tmej, T., Tse, W. -H., Tull, C. E., Tung, Y. C., Viren, B., Vorobel, V., Wang, C. H., Wang, J., Wang, M., Wang, N. Y., Wang, R. G., Wang, W., Wang, X., Wang, Y. F., Wang, Z., Wang, Z. M., Wei, H. Y., Wei, L. H., Wei, W., Wen, L. J., Whisnant, K., White, C. G., Wong, H. L. H., Worcester, E., Wu, D. R., Wu, Q., Wu, W. J., Xia, D. M., Xie, Z. Q., Xing, Z. Z., Xu, H. K., Xu, J. L., Xu, T., Xue, T., Yang, C. G., Yang, L., Yang, Y. Z., Yao, H. F., Ye, M., Yeh, M., Young, B. L., Yu, H. Z., Yu, Z. Y., Yue, B. B., Zavadskyi, V., Zeng, S., Zeng, Y., Zhan, L., Zhang, C., Zhang, F. Y., Zhang, H. H., Zhang, J. L., Zhang, J. W., Zhang, Q. M., Zhang, S. Q., Zhang, X. T., Zhang, Y. M., Zhang, Y. X., Zhang, Y. Y., Zhang, Z. J., Zhang, Z. P., Zhang, Z. Y., Zhao, J., Zhao, R. Z., Zhou, L., Zhuang, H. L., and Zou, J. H.
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High Energy Physics - Phenomenology ,High Energy Physics - Experiment - Abstract
The full data set of the Daya Bay reactor neutrino experiment is used to probe the effect of the charged current non-standard interactions (CC-NSI) on neutrino oscillation experiments. Two different approaches are applied and constraints on the corresponding CC-NSI parameters are obtained with the neutrino flux taken from the Huber-Mueller model with a $5\%$ uncertainty. For the quantum mechanics-based approach (QM-NSI), the constraints on the CC-NSI parameters $\epsilon_{e\alpha}$ and $\epsilon_{e\alpha}^{s}$ are extracted with and without the assumption that the effects of the new physics are the same in the production and detection processes, respectively. The approach based on the weak effective field theory (WEFT-NSI) deals with four types of CC-NSI represented by the parameters $[\varepsilon_{X}]_{e\alpha}$. For both approaches, the results for the CC-NSI parameters are shown for cases with various fixed values of the CC-NSI and the Dirac CP-violating phases, and when they are allowed to vary freely. We find that constraints on the QM-NSI parameters $\epsilon_{e\alpha}$ and $\epsilon_{e\alpha}^{s}$ from the Daya Bay experiment alone can reach the order $\mathcal{O}(0.01)$ for the former and $\mathcal{O}(0.1)$ for the latter, while for WEFT-NSI parameters $[\varepsilon_{X}]_{e\alpha}$, we obtain $\mathcal{O}(0.1)$ for both cases., Comment: 25 pages, 16 figures, 6 tables; 36 pages, format changed, references added
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- 2024
69. Identification and recombinant expression of a cutinase from Papiliotrema laurentii that hydrolyzes natural and synthetic polyesters.
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Roman, Victor, Crable, Bryan, Wagner, Dominique, Gryganskyi, Andrii, Zelik, Stephen, Cummings, Logan, Hung, Chia, Nadeau, Lloyd, Schratz, Lucas, Haridas, Sajeet, Pangilinan, Jasmyn, Lipzen, Anna, Na, Hyunsoo, Yan, Mi, Ng, Vivian, Grigoriev, Igor, Barlow, Daniel, Biffinger, Justin, Kelley-Loughnane, Nancy, Crookes-Goodson, Wendy, Stamps, Blake, and Varaljay, Vanessa
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Papiliotrema laurentii ,Plcut1 ,biodegradation ,cutinase ,esterase ,hydrolase ,polyester polyurethane ,Carboxylic Ester Hydrolases ,Fungal Proteins ,Recombinant Proteins ,Polyesters ,Hydrolysis - Abstract
Given the multitude of extracellular enzymes at their disposal, many of which are designed to degrade natures polymers (lignin, cutin, cellulose, etc.), fungi are adept at targeting synthetic polyesters with similar chemical composition. Microbial-influenced deterioration of xenobiotic polymeric surfaces is an area of interest for material scientists as these are important for the conservation of the underlying structural materials. Here, we describe the isolation and characterization of the Papiliotrema laurentii 5307AH (P. laurentii) cutinase, Plcut1. P. laurentii is basidiomycete yeast with the ability to disperse Impranil-DLN (Impranil), a colloidal polyester polyurethane, in agar plates. To test whether the fungal factor involved in this clearing was a secreted enzyme, we screened the ability of P. laurentii culture supernatants to disperse Impranil. Using size exclusion chromatography (SEC), we isolated fractions that contained Impranil-clearing activity. These fractions harbored a single ~22 kD band, which was excised and subjected to peptide sequencing. Homology searches using the peptide sequences identified, revealed that the protein Papla1 543643 (Plcut1) displays similarities to serine esterase and cutinase family of proteins. Biochemical assays using recombinant Plcut1 confirmed that this enzyme has the capability to hydrolyze Impranil, soluble esterase substrates, and apple cutin. Finally, we confirmed the presence of the Plcut1 in culture supernatants using a custom antibody that specifically recognizes this protein. The work shown here supports a major role for the Plcut1 in the fungal degradation of natural polyesters and xenobiotic polymer surfaces.IMPORTANCEFungi play a vital role in the execution of a broad range of biological processes that drive ecosystem function through production of a diverse arsenal of enzymes. However, the universal reactivity of these enzymes is a current problem for the built environment and the undesired degradation of polymeric materials in protective coatings. Here, we report the identification and characterization of a hydrolase from Papiliotrema laurentii 5307AH, an aircraft-derived fungal isolate found colonizing a biodeteriorated polymer-coated surface. We show that P. laurentii secretes a cutinase capable of hydrolyzing soluble esters as well as ester-based compounds forming solid surface coatings. These findings indicate that this fungus plays a significant role in biodeterioration through the production of a cutinase adept at degrading ester-based polymers, some of which form the backbone of protective surface coatings. The work shown here provides insights into the mechanisms employed by fungi to degrade xenobiotic polymers.
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- 2024
70. Giant spin transport anisotropy in magnetic topological insulators
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Vila, Marc, Cummings, Aron W, and Roche, Stephan
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Physical Sciences ,Condensed Matter Physics ,Chemical sciences ,Engineering ,Physical sciences - Abstract
We report on exceptionally long spin transport and giant spin lifetime anisotropy in the gapped surface states of three-dimensional (3D) magnetic topological insulators (MTIs). We examine the properties of these states using the three-dimensional Fu-Kane-Mele Hamiltonian model in the presence of a magnetic exchange field. The corresponding spin textures of surface states, which are well reproduced by an effective two-band model, hint at a considerable enhancement of the lifetime of out-of-plane spins compared to in-plane spins. This is confirmed by large-scale spin transport simulations for 3D MTIs with disorder. The energy dependence of the spin lifetime anisotropy arises directly from the nontrivial spin texture of the surface states, and is correlated with the onset of the quantum anomalous Hall phase. Our findings suggest different spin filtering capabilities of the gapped surface MTI states, which could be explored by nonlocal spin valve measurements.
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- 2024
71. Accelerating Progress Towards the 2030 Neglected Tropical Diseases Targets: How Can Quantitative Modeling Support Programmatic Decisions?
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Borlase, Anna, Brady, Oliver, Browning, Raiha, Chitnis, Nakul, Coffeng, Luc, Crowley, Emily, Cucunubá, Zulma, Cummings, Derek, Davis, Christopher, Davis, Emma, Dixon, Matthew, Dobson, Andrew, Dyson, Louise, French, Michael, Fronterre, Claudio, Giorgi, Emanuele, Huang, Ching-I, Jain, Saurabh, James, Ananthu, Kim, Sung, Kura, Klodeta, Lucianez, Ana, Marks, Michael, Mbabazi, Pamela, Medley, Graham, Michael, Edwin, Montresor, Antonio, Mutono, Nyamai, Mwangi, Thumbi, Rock, Kat, Saboyá-Díaz, Martha-Idalí, Sasanami, Misaki, Schwehm, Markus, Spencer, Simon, Srivathsan, Ariktha, Stawski, Robert, Stolk, Wilma, Sutherland, Samuel, Tchuenté, Louis-Albert, de Vlas, Sake, Walker, Martin, Brooker, Simon, Hollingsworth, T, Solomon, Anthony, Fall, Ibrahima, Vasconcelos, Andreia, King, Jonathan, Nunes-Alves, Cláudio, Anderson, Roy, Argaw, Daniel, Basáñez, Maria-Gloria, Bilal, Shakir, Blok, David, and Blumberg, Seth
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control ,elimination ,mathematical models ,neglected tropical diseases ,policy-making ,Neglected Diseases ,Humans ,Tropical Medicine ,COVID-19 ,Models ,Theoretical ,World Health Organization ,SARS-CoV-2 ,Decision Making ,Global Health - Abstract
Over the past decade, considerable progress has been made in the control, elimination, and eradication of neglected tropical diseases (NTDs). Despite these advances, most NTD programs have recently experienced important setbacks; for example, NTD interventions were some of the most frequently and severely impacted by service disruptions due to the coronavirus disease 2019 (COVID-19) pandemic. Mathematical modeling can help inform selection of interventions to meet the targets set out in the NTD road map 2021-2030, and such studies should prioritize questions that are relevant for decision-makers, especially those designing, implementing, and evaluating national and subnational programs. In September 2022, the World Health Organization hosted a stakeholder meeting to identify such priority modeling questions across a range of NTDs and to consider how modeling could inform local decision making. Here, we summarize the outputs of the meeting, highlight common themes in the questions being asked, and discuss how quantitative modeling can support programmatic decisions that may accelerate progress towards the 2030 targets.
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- 2024
72. Neuroinflammation drives sex-dependent effects on pain and negative affect in a murine model of repeated mild traumatic brain injury.
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Liu, Shiwei, Pickens, Sarah, Barta, Zack, Rice, Myra, Dagher, Merel, Lebens, Ryan, Nguyen, Theodore, Cummings, Brian, and Cahill, Catherine
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Mice ,Male ,Female ,Animals ,Brain Concussion ,Neuroinflammatory Diseases ,Disease Models ,Animal ,Minocycline ,Gabapentin ,Mice ,Inbred C57BL ,Pain - Abstract
The Center for Disease Control and Prevention estimates that 75% of reported cases of traumatic brain injury (TBI) are mild, where chronic pain and depression are 2 of the most common symptoms. In this study, we used a murine model of repeated mild TBI to characterize the associated pain hypersensitivity and affective-like behavior and to what extent microglial reactivity contributes to these behavioral phenotypes. Male and female C57BL/6J mice underwent sham or repeated mild traumatic brain injury (rmTBI) and were tested for up to 9 weeks postinjury, where an anti-inflammatory/neuroprotective drug (minocycline) was introduced at 5 weeks postinjury in the drinking water. Repeated mild traumatic brain injury mice developed cold nociceptive hypersensitivity and negative affective states, as well as increased locomotor activity and risk-taking behavior. Minocycline reversed negative affect and pain hypersensitivities in male but not female mice. Repeated mild traumatic brain injury also produced an increase in microglial and brain-derived neurotropic factor mRNA transcripts in limbic structures known to be involved in nociception and affect, but many of these changes were sex dependent. Finally, we show that the antiepileptic drug, gabapentin, produced negative reinforcement in male rmTBI mice that was prevented by minocycline treatment, whereas rmTBI female mice showed a place aversion to gabapentin. Collectively, pain hypersensitivity, increased tonic-aversive pain components, and negative affective states were evident in both male and female rmTBI mice, but suppression of microglial reactivity was only sufficient to reverse behavioral changes in male mice. Neuroinflammation in limbic structures seems to be a contributing factor in behavioral changes resulting from rmTBI.
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- 2024
73. Lower muscle mitochondrial energetics is associated with greater phenotypic frailty in older women and men: the Study of Muscle, Mobility and Aging.
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Mau, Theresa, Barnes, Haley, Blackwell, Terri, Kramer, Philip, Bauer, Scott, Marcinek, David, Ramos, Sofhia, Forman, Daniel, Toledo, Frederico, Hepple, Russell, Kritchevsky, Stephen, Cummings, Steven, Newman, Anne, Coen, Paul, and Cawthon, Peggy
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Aging ,Mitochondria ,Muscle energetics ,Phenotypic frailty ,Male ,Aged ,Humans ,Female ,Frailty ,Frail Elderly ,Muscles ,Aging ,Mitochondria ,Adenosine Triphosphate - Abstract
BACKGROUND: Phenotypic frailty syndrome identifies older adults at greater risk for adverse health outcomes. Despite the critical role of mitochondria in maintaining cellular function, including energy production, the associations between muscle mitochondrial energetics and frailty have not been widely explored in a large, well-phenotyped, older population. METHODS: The Study of Muscle, Mobility and Aging (SOMMA) assessed muscle energetics in older adults (N = 879, mean age = 76.3 years, 59.2% women). 31Phosporous magnetic resonance spectroscopy measured maximal production of adenosine triphosphate (ATPmax) in vivo, while ex vivo high-resolution respirometry of permeabilized muscle fibers from the vastus lateralis measured maximal oxygen consumption supported by fatty acids and complex I- and II-linked carbohydrates (e.g., Max OXPHOSCI+CII). Five frailty criteria, shrinking, weakness, exhaustion, slowness, and low activity, were used to classify participants as robust (0, N = 397), intermediate (1-2, N = 410), or frail (≥ 3, N = 66). We estimated the proportional odds ratio (POR) for greater frailty, adjusted for multiple potential confounders. RESULTS: One-SD decrements of most respirometry measures (e.g., Max OXPHOSCI+CII, adjusted POR = 1.5, 95%CI [1.2,1.8], p = 0.0001) were significantly associated with greater frailty classification. The associations of ATPmax with frailty were weaker than those between Max OXPHOSCI+CII and frailty. Muscle energetics was most strongly associated with slowness and low physical activity components. CONCLUSIONS: Our data suggest that deficits in muscle mitochondrial energetics may be a biological driver of frailty in older adults. On the other hand, we did observe differential relationships between measures of muscle mitochondrial energetics and the individual components of frailty.
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- 2024
74. Adaptive Radiotherapy: Next-Generation Radiotherapy.
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Dona Lemus, Olga, Cao, Minsong, Cai, Bin, Cummings, Michael, and Zheng, Dandan
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CBCT ,IGRT ,MRgRT ,PET ,adaptive radiotherapy ,adaptive replanning ,personalized medicine ,treatment adaptation - Abstract
Radiotherapy, a crucial technique in cancer therapy, has traditionally relied on the premise of largely unchanging patient anatomy during the treatment course and encompassing uncertainties by target margins. This review introduces adaptive radiotherapy (ART), a notable innovation that addresses anatomy changes and optimizes the therapeutic ratio. ART utilizes advanced imaging techniques such as CT, MRI, and PET to modify the treatment plan based on observed anatomical changes and even biological changes during the course of treatment. The narrative review provides a comprehensive guide on ART for healthcare professionals and trainees in radiation oncology and anyone else interested in the topic. The incorporation of artificial intelligence in ART has played a crucial role in improving effectiveness, particularly in contour segmentation, treatment planning, and quality assurance. This has expedited the process to render online ART feasible, lowered the burden for radiation oncology practitioners, and enhanced the precision of dynamically personalized treatment. Current technical and clinical progress on ART is discussed in this review, highlighting the ongoing development of imaging technologies and AI and emphasizing their contribution to enhancing the applicability and effectiveness of ART.
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- 2024
75. Multichannel bridges and NSC synergize to enhance axon regeneration, myelination, synaptic reconnection, and recovery after SCI.
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Dumont, Courtney, Piltti, Katja, Guardamondo, Glenn, Hernandez, Norbert, Chen, Xingyuan, Song, Hui, Lin, Xiaoxiao, Martinez, Joshua, On, Lillian, Lakatos, Anita, Pawar, Kiran, David, Brian, Guo, Zhiling, Seidlits, Stephanie, Xu, Xiangmin, Shea, Lonnie, Sakthivel, Pooja, Zahedi, Atena, Creasman, Dana, Cummings, Brian, Anderson, Aileen, Nishi, Rebecca, and Nekanti, Usha
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Regeneration in the injured spinal cord is limited by physical and chemical barriers. Acute implantation of a multichannel poly(lactide-co-glycolide) (PLG) bridge mechanically stabilizes the injury, modulates inflammation, and provides a permissive environment for rapid cellularization and robust axonal regrowth through this otherwise inhibitory milieu. However, without additional intervention, regenerated axons remain largely unmyelinated (
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- 2024
76. Childhood adverse life events and skeletal muscle mitochondrial function.
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Duchowny, Kate, Marcinek, David, Mau, Theresa, Diaz-Ramierz, L, Lui, Li-Yung, Toledo, Frederico, Cawthon, Peggy, Hepple, Russell, Kramer, Philip, Newman, Anne, Kritchevsky, Stephen, Cummings, Steven, Coen, Paul, and Molina, Anthony
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Female ,Humans ,Aged ,Male ,Muscle ,Skeletal ,Musculoskeletal Physiological Phenomena ,Adenosine Triphosphate ,Aging ,Mitochondria - Abstract
Social stress experienced in childhood is associated with adverse health later in life. Mitochondrial function has been implicated as a mechanism for how stressful life events get under the skin to influence physical well-being. Using data from the Study of Muscle, Mobility, and Aging (n = 879, 59% women), linear models examined whether adverse childhood events (i.e., physical abuse) were associated with two measures of skeletal muscle mitochondrial energetics in older adults: (i) maximal adenosine triphosphate production (ATPmax) and (ii) maximal state 3 respiration (Max OXPHOS). Forty-five percent of the sample reported experiencing one or more adverse childhood events. After adjustment, each additional event was associated with -0.08 SD (95% confidence interval = -0.13, -0.02) lower ATPmax. No association was observed with Max OXPHOS. Adverse childhood events are associated with lower ATP production in later life. Findings indicate that mitochondrial function may be a mechanism for understanding how early social stress influences health in later life.
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- 2024
77. Flortaucipir tau PET findings from former professional and college American football players in the DIAGNOSE CTE research project.
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Su, Yi, Protas, Hillary, Luo, Ji, Chen, Kewei, Alosco, Michael, Adler, Charles, Balcer, Laura, Bernick, Charles, Au, Rhoda, Banks, Sarah, Barr, William, Coleman, Michael, Dodick, David, Katz, Douglas, Marek, Kenneth, McClean, Michael, McKee, Ann, Mez, Jesse, Daneshvar, Daniel, Palmisano, Joseph, Peskind, Elaine, Turner, Robert, Wethe, Jennifer, Johnson, Keith, Tripodis, Yorghos, Cummings, Jeffrey, Shenton, Martha, Stern, Robert, Reiman, Eric, and Rabinovici, Gil
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CTE ,PET ,Tau ,flortaucipir ,football ,Male ,Humans ,Middle Aged ,Chronic Traumatic Encephalopathy ,Football ,tau Proteins ,Positron-Emission Tomography ,Brain Injuries ,Traumatic ,Carbolines - Abstract
INTRODUCTION: Tau is a key pathology in chronic traumatic encephalopathy (CTE). Here, we report our findings in tau positron emission tomography (PET) measurements from the DIAGNOSE CTE Research Project. METHOD: We compare flortaucipir PET measures from 104 former professional players (PRO), 58 former college football players (COL), and 56 same-age men without exposure to repetitive head impacts (RHI) or traumatic brain injury (unexposed [UE]); characterize their associations with RHI exposure; and compare players who did or did not meet diagnostic criteria for traumatic encephalopathy syndrome (TES). RESULTS: Significantly elevated flortaucipir uptake was observed in former football players (PRO+COL) in prespecified regions (p
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- 2024
78. Dynamics of a millimeter size drop exposed to MHz-frequency surface acoustic wave in the underlying solid substrate
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Li, Y., Diez, J. A., D'Addesa, J., Manor, O., Cummings, L. J., and Kondic, L.
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Physics - Fluid Dynamics - Abstract
We present an experimental, theoretical, and computational study of the spreading of a millimetric silicon oil drop under the excitation of a surface acoustic wave (SAW), traveling in the underlying solid substrate. Our theoretical model, formulated within the long wave approach, dynamically captures the interplay between fluid dynamics and acoustic driving forces, emphasizing Eckart streaming as the dominant mechanism over Schlichting and Rayleigh streaming due to drop thickness. Following an initial deformation phase to accommodate acoustic stress, the drop accelerates to a sustained translation at nearly constant speed, leaving behind a thin wetting layer. This speed is sustained by the quasi-steady shape of the drop's main body, influenced by SAW attenuation. Notably, SAW attenuation becomes significant once the wave reaches the main body of the drop, with weaker effects observed under the air and the micron-thick liquid trail left behind the drop. The translating drop's speed is found to be dependent on the drop size, as well as on the SAW intensity. The drop's steady shape and speed are further informed by analytical consideration of a simplified traveling wave type model, that clarifies contributions from different physical effects. The theoretical results show qualitative and sometimes even quantitative agreement with the experiments, particularly regarding drop height and traveling speed.
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- 2023
79. The entropy of finite gravitating regions
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Balasubramanian, Vijay and Cummings, Charlie
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High Energy Physics - Theory ,General Relativity and Quantum Cosmology - Abstract
We develop a formalism for calculating the entanglement entropy of an arbitrary spatial region of a gravitating spacetime at a moment of time symmetry. The crucial ingredient is a path integral over embeddings of the region into the overall spacetime, interpretable as a sum over the edge modes associated with the region. We find that the entanglement entropy of a gravitating region equals the minimal surface area among all regions that enclose it. This suggests a notion of "terrestrial holography" where regions of space can encode larger ones, in contrast to the standard form of holography, in which degrees of freedom on the celestial sphere at the boundary of the universe encode the interior., Comment: 29 pages, 8 figures. v3: Expanded Sec. 3.4 and 4, added references, fixed typos
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- 2023
80. JEM-EUSO Collaboration contributions to the 38th International Cosmic Ray Conference
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Abe, S., Adams Jr., J. H., Allard, D., Alldredge, P., Aloisio, R., Anchordoqui, L., Anzalone, A., Arnone, E., Bagheri, M., Baret, B., Barghini, D., Battisti, M., Bellotti, R., Belov, A. A., Bertaina, M., Bertone, P. F., Bianciotto, M., Bisconti, F., Blaksley, C., Blin-Bondil, S., Bolmgren, K., Briz, S., Burton, J., Cafagna, F., Cambiè, G., Campana, D., Capel, F., Caruso, R., Casolino, M., Cassardo, C., Castellina, A., Černý, K., Christl, M. J., Colalillo, R., Conti, L., Cotto, G., Crawford, H. J., Cremonini, R., Creusot, A., Cummings, A., Gónzalez, A. de Castro, de la Taille, C., Diesing, R., Dinaucourt, P., Di Nola, A., Ebisuzaki, T., Eser, J., Fenu, F., Ferrarese, S., Filippatos, G., Finch, W. W., Flaminio, F., Fornaro, C., Fuehne, D., Fuglesang, C., Fukushima, M., Gadamsetty, S., Gardiol, D., Garipov, G. K., Gazda, E., Golzio, A., Guarino, F., Guépin, C., Haungs, A., Heibges, T., Isgrò, F., Judd, E. G., Kajino, F., Kaneko, I., Kim, S. -W., Klimov, P. A., Krizmanic, J. F., Kungel, V., Kuznetsov, E., Martínez, F. López, Mandát, D., Manfrin, M., Marcelli, A., Marcelli, L., Marszał, W., Matthews, J. N., Mese, M., Meyer, S. S., Mimouni, J., Miyamoto, H., Mizumoto, Y., Monaco, A., Nagataki, S., Nachtman, J. M., Naumov, D., Neronov, A., Nonaka, T., Ogawa, T., Ogio, S., Ohmori, H., Olinto, A. V., Onel, Y., Osteria, G., Otte, A. N., Pagliaro, A., Panico, B., Parizot, E., Park, I. H., Paul, T., Pech, M., Perfetto, F., Picozza, P., Piotrowski, L. W., Plebaniak, Z., Posligua, J., Potts, M., Prevete, R., Prévôt, G., Przybylak, M., Reali, E., Reardon, P., Reno, M. H., Ricci, M., Matamala, O. F. Romero, Romoli, G., Sagawa, H., Sakaki, N., Saprykin, O. A., Sarazin, F., Sato, M., Schovánek, P., Scotti, V., Selmane, S., Sharakin, S. A., Shinozaki, K., Stepanoff, S., Soriano, J. F., Szabelski, J., Tajima, N., Tajima, T., Takahashi, Y., Takeda, M., Takizawa, Y., Thomas, S. B., Tkachev, L. G., Tomida, T., Toscano, S., Traïche, M., Trofimov, D., Tsuno, K., Vallania, P., Valore, L., Venters, T. M., Vigorito, C., Vrábel, M., Wada, S., Watts Jr., J., Wiencke, L., Winn, D., Wistrand, H., Yashin, I. V., Young, R., and Zotov, M. Yu.
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Astrophysics - High Energy Astrophysical Phenomena ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
This is a collection of papers presented by the JEM-EUSO Collaboration at the 38th International Cosmic Ray Conference (Nagoya, Japan, July 26-August 3, 2023)
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- 2023
81. The Pfaffian Structure of CFN Phylogenetic Networks
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Cummings, Joseph, Gross, Elizabeth, Hollering, Benjamin, Martin, Samuel, and Nometa, Ikenna
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Mathematics - Algebraic Geometry ,Quantitative Biology - Populations and Evolution ,92B10, 62R01, 13P25 - Abstract
Algebraic techniques in phylogenetics have historically been successful at proving identifiability results and have also led to novel reconstruction algorithms. In this paper, we study the ideal of phylogenetic invariants of the Cavender-Farris-Neyman (CFN) model on a phylogenetic network with the goal of providing a description of the invariants which is useful for network inference. It was previously shown that to characterize the invariants of any level-1 network, it suffices to understand all sunlet networks, which are those consisting of a single cycle with a leaf adjacent to each cycle vertex. We show that the parameterization of an affine open patch of the CFN sunlet model, which intersects the probability simplex factors through the space of skew-symmetric matrices via Pfaffians. We then show that this affine patch is isomorphic to a determinantal variety and give an explicit Gr{\"o}bner basis for the associated ideal, which involves only polynomially many coordinates. Lastly, we show that sunlet networks with at least 6 leaves are identifiable using only these polynomials and run extensive simulations, which show that these polynomials can be used to accurately infer the correct network from DNA sequence data., Comment: 26 pages, 3 figures, 3 tables
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- 2023
82. Neural Architecture Codesign for Fast Bragg Peak Analysis
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McDermott, Luke, Weitz, Jason, Demler, Dmitri, Cummings, Daniel, Tran, Nhan, and Duarte, Javier
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Computer Science - Machine Learning - Abstract
We develop an automated pipeline to streamline neural architecture codesign for fast, real-time Bragg peak analysis in high-energy diffraction microscopy. Traditional approaches, notably pseudo-Voigt fitting, demand significant computational resources, prompting interest in deep learning models for more efficient solutions. Our method employs neural architecture search and AutoML to enhance these models, including hardware costs, leading to the discovery of more hardware-efficient neural architectures. Our results match the performance, while achieving a 13$\times$ reduction in bit operations compared to the previous state-of-the-art. We show further speedup through model compression techniques such as quantization-aware-training and neural network pruning. Additionally, our hierarchical search space provides greater flexibility in optimization, which can easily extend to other tasks and domains., Comment: To appear in 3rd Annual AAAI Workshop on AI to Accelerate Science and Engineering (AI2ASE)
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- 2023
83. Post-Pandemic Digital Writing Instruction Will Be Resilient, Open, and Inclusive
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Cummings, Robert
- Abstract
During the pandemic three widespread shifts in teaching cultures affected digital writing pedagogies: resilient teaching, open teaching, and inclusive teaching. Resilient teaching design emerged as a strategy to counter the unpredictability of public health policies on class delivery modes, and emphasised designing for maximising student interactions as a response. Open teaching started as a response to a lack of access to textbooks and evolved to transform functions normally reserved for teaching into learning activities. In addition, inclusive teaching practices, developed as a response to racial and social injustices, resulted in deliberate emphasis on class structure to incorporate all students. Although seemingly disparate and disconnected from the issues of technology that normally influence the teaching of digital writing, each shift focused on student needs and predict a future for digital writing pedagogy.
- Published
- 2023
84. Skill up Tennessee: Job Training That Works
- Author
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Sneed, Christopher T., Upendram, Sreedhar, Cummings, Clint, and Fox, Janet E.
- Abstract
Employment and training services offered through Extension are part of and continue a long tradition of policy-focused employment and job training. This paper chronicles the successes of UT Extension's work as a third-party partner in the delivery of workforce development programming geared toward individuals receiving Supplemental Nutrition Assistance Program (SNAP) benefits. The paper begins with an overview of the federal program and a discussion of how Tennessee forged a state-level partnership for the delivery of workforce services. Data showing program success including number of participants served, supportive services offered, and economic impact are highlighted. Finally, lessons learned are outlined.
- Published
- 2023
85. Advancing Adult Learning Using Andragogic Instructional Practices
- Author
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Livingston, Manuel and Cummings-Clay, Denise
- Abstract
Community-college professors possess knowledge in distinct disciplines and have varied experiences that they encompass in their college classrooms. Additionally, creating effective environments for teaching and learning require these assets from instructors to fulfill their curriculum needs. Teaching is a multidimensional and complex activity that requires the instructor to utilize various tools to effectively engage college learners. Often, instructors rely on their past educational experiences that were based on pedagogy (child-focused teaching) to deliver intricate material to adult learners. In this case, a dichotomy of subject delivery may arbitrarily be sustained in the classroom where the effectiveness of pedagogy limits the development of critical-thinking skill sets. Andragogy is an adult learning theory that informs teaching methodology developed to focus more on learner-based practices that grow from the content of lessons. It has been effective in engaging the characteristics of community college learners (Knowles, 1980b) in developing skill sets vital to various disciplines. The aim of this article is to encourage discussions on college campuses of how using andragogy advances adult learning by exploring andragogy usage in Radiologic Technology (RT) and Early-Childhood Education (ECE) classrooms at an urban community college. Moreover, it is hoped that this article will provide undergraduate educators with instructional approaches that advance adult learning outcomes.
- Published
- 2023
86. The relationship between 11 different polygenic longevity scores, parental lifespan, and disease diagnosis in the UK Biobank
- Author
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Don, Janith, Schork, Andrew J., Glusman, Gwênlyn, Rappaport, Noa, Cummings, Steve R., Duggan, David, Raju, Anish, Hellberg, Kajsa-Lotta Georgii, Gunn, Sophia, Monti, Stefano, Perls, Thomas, Lapidus, Jodi, Goetz, Laura H., Sebastiani, Paola, and Schork, Nicholas J.
- Published
- 2024
- Full Text
- View/download PDF
87. Obesity in Refugees post-resettlement in a high-income country: a meta-analysis
- Author
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Kibibi, Niclette I., Dena, Isabelle, Cummings, Precious de-Winton, Hicks, Chelsea D., Bao, Wei, and Schweizer, Marin L.
- Published
- 2024
- Full Text
- View/download PDF
88. Valuing the Economic Impact of River Floods and Early Flood Warning for Households in Bangladesh
- Author
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Zayed, Stephanie, Morrison, Laura T. R., Lapidus, Daniel, Gallaher, Michael, Letterman, Clark, Allpress, Justine L. E., and Cummings, Stirling
- Published
- 2024
- Full Text
- View/download PDF
89. A Mixed Finite Element Approximation for Fluid Flows of Mixed Regimes in Porous Media
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Cummings, J., Hamilton, M., and Kieu, T.
- Published
- 2024
- Full Text
- View/download PDF
90. Stem-like T cells are associated with the pathogenesis of ulcerative colitis in humans
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Li, Yingcong, Ramírez-Suástegui, Ciro, Harris, Richard, Castañeda-Castro, Francisco Emmanuel, Ascui, Gabriel, Pérez-Jeldres, Tamara, Diaz, Alejandro, Morong, Carla, Giles, Daniel A., Chai, Jiani, Seumois, Gregory, Sanchez-Elsner, Tilman, Cummings, Fraser, Kronenberg, Mitchell, and Vijayanand, Pandurangan
- Published
- 2024
- Full Text
- View/download PDF
91. Interest in I-PrEP and Willingness to Participate in Clinical Trials Among Men and Transfeminine Persons Who have Sex with Men in Sub-Saharan Africa: Quantitative and Qualitative Findings from HPTN 075
- Author
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Sandfort, Theodorus G. M., Kreniske, Philip, Mbeda, Calvin, Reynolds, Doerieyah, Tshabalala, Gugulethu, Madiwati, Blessings, Ogendo, Arthur, Dominquez, Karen, Panchia, Ravindre, Gondwe, Daniel, Hamilton, Erica L., Guo, Xu, and Cummings, Vanessa
- Published
- 2024
- Full Text
- View/download PDF
92. Microporous structure in silicone polymers with polylactic acid and polyethylene glycol microspheres: Synthesis and characterization
- Author
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Damptey, Ransford, Torres, Sabrina, Cummings, Laura, and Mohan, Ram V.
- Published
- 2024
- Full Text
- View/download PDF
93. Alzheimer’s Disease: Combination Therapies and Clinical Trials for Combination Therapy Development
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Cummings, Jeffrey L., Osse, Amanda M. Leisgang, Kinney, Jefferson W., Cammann, Davis, and Chen, Jingchun
- Published
- 2024
- Full Text
- View/download PDF
94. p75 neurotrophin receptor modulation in mild to moderate Alzheimer disease: a randomized, placebo-controlled phase 2a trial
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Shanks, Hayley R. C., Chen, Kewei, Reiman, Eric M., Blennow, Kaj, Cummings, Jeffrey L., Massa, Stephen M., Longo, Frank M., Börjesson-Hanson, Anne, Windisch, Manfred, and Schmitz, Taylor W.
- Published
- 2024
- Full Text
- View/download PDF
95. Engineering and public health: converging disciplines for resilient solutions
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Cummings, Christopher L., Wells, Emily M., and Trump, Benjamin D.
- Published
- 2024
- Full Text
- View/download PDF
96. Official risk communication for COVID-19 and beyond: can we do a better job?
- Author
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Linkov, Faina, Cummings, Christopher L., and Dausey, David J.
- Published
- 2024
- Full Text
- View/download PDF
97. Development of a population attributable risk screening tool to estimate health consequences of consumer product exposure
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Rosenstein, Amy B., Thomas, Treye, Linkov, Igor, Cummings, Christopher, Kramer, Kelby, Deng, Jason, Pollock, Miriam, and Keisler, Jeffrey M.
- Published
- 2024
- Full Text
- View/download PDF
98. Values-based Self-care: What We Learn from Racialized Activists’ Care Practices
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Mohammed, Sarah S. and Cummings, Jorden A.
- Published
- 2024
- Full Text
- View/download PDF
99. Mindfulness-Based Stress Reduction for Symptom Management in Older Individuals with HIV-Associated Neurocognitive Disorder
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Moskowitz, Judith T., Sharma, Brijesh, Javandel, Shireen, Moran, Patricia, Paul, Robert, De Gruttola, Victor, Tomov, Dimitre, Azmy, Haleem, Sandoval, Rodrigo, Hillis, Madeline, Chen, Karen P., Tsuei, Torie, Addington, Elizabeth L., Cummings, Peter D., Hellmuth, Joanna, Allen, Isabel Elaine, Ances, Beau M., Valcour, Victor, and Milanini, Benedetta
- Published
- 2024
- Full Text
- View/download PDF
100. Can societal and ethical implications of precision microbiome engineering be applied to the built environment? A systematic review of the literature
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Hardwick, Andrew, Cummings, Christopher, Graves, Jr., Joseph, and Kuzma, Jennifer
- Published
- 2024
- Full Text
- View/download PDF
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