3,240 results on '"Crous, P.W.'
Search Results
52. Dothideomycetidae internal transcribed spacer 1, partial sequence; 5.8S ribosomal RNA gene and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence
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Quaedvlieg, W., Binder, M., Groenewald, J.Z., Summerell, B.A., Carnegie, A.J., Burgess, T.I., Crous, P.W., Quaedvlieg, W., Binder, M., Groenewald, J.Z., Summerell, B.A., Carnegie, A.J., Burgess, T.I., and Crous, P.W.
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- 2022
53. Taxonomy, phylogeny and identification of Chaetomiaceae with emphasis on thermophilic species
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Wang, X.W., primary, Han, P.J., additional, Bai, F.Y., additional, Luo, A., additional, Bensch, K., additional, Meijer, M., additional, Kraak, B., additional, Han, D.Y., additional, Sun, B.D., additional, Crous, P.W., additional, and Houbraken, J., additional
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- 2022
- Full Text
- View/download PDF
54. Venturiales
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M. Shen, J.Q. Zhang, L.L. Zhao, J.Z. Groenewald, P.W. Crous, Y. Zhang, Westerdijk Fungal Biodiversity Institute - Evolutionary Phytopathology, and Westerdijk Fungal Biodiversity Institute
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Parafusicladium amoenum (R.F. Castañeda & Dugan) Crous, M. Shen & Y. Zhang ter ,Venturia peltigericola (Crous & Diederich) Crous, M. Shen & Y. Zhang ter ,Fraxinicola fraxini (Aderh.) Crous, M. Shen & Y. Zhang ter ,Neofusicladium eucalypticola (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter ,Neofusicladium eucalypti (Crous & R.G. Shivas) Crous, M. Shen & Y. Zhang ter ,Scolecobasidium bacilliforme (Samerp. et al.) Crous, M. Shen & Y. Zhang ter ,Fraxinicola Crous, M. Shen & Y. Zhang ter ,Tyrannosorus lichenicola Crous, M. Shen & Y. Zhang ter ,Tyrannosorus pini-sylvestris Crous & R.K. Schumach ,Scolecobasidium podocarpi (Crous) Crous, M. Shen & Y. Zhang ter ,Bellamyces quercus Crous, Coppins & U. Braun ,Scolecobasidium musicola (Crous) Crous, M. Shen & Y. Zhang ter ,Scolecobasidium cordanae (Samerp. et al.) Crous, M. Shen & Y. Zhang ter ,Scolecobasidium aquaticum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter ,Venturia australiana Crous, M. Shen & Y. Zhang ter ,Fuscohilum rhodensis (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter, Fuscohilum siciliana (Koukol) Crous, M. Shen & Y. Zhang ter ,Niesslia iridicola (M.E. Barr) Crous, M. Shen & Y. Zhang ter ,lcsh:QH301-705.5 ,Scolecobasidium icarus (Samerp. et al.) Crous, M. Shen & Y. Zhang ter ,Scab disease ,Tyrannosorus hystrioides (Dugan et al.) Crous, M. Shen & Y. Zhang ter ,Scolecobasidium atlanticuum (A.M. Wellman) Crous, M. Shen & Y. Zhang ter ,Pinaceicola cordae (Koukol) Crous, M. Shen & Y. Zhang ter ,Venturia ,Fraxinicola orni (M. Ibrahim et al.) Crous, M. Shen & Y. Zhang ter ,Scolecobasidium verrucosum (Zachariah et al.) Crous, M. Shen & Y. Zhang ter ,Venturia caesiae Crous, M. Shen & Y. Zhang ter ,Agricultural and Biological Sciences (miscellaneous) ,Scolecobasidium sexuale (Samerp. et al.) Crous, M. Shen & Y. Zhang ter ,Scolecobasidium phaeophorum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter ,Cylindrosympodiaceae Crous, M. Shen & Y. Zhang ter ,Scolecobasidium olivaceum (A. Giraldo et al.) Crous, M. Shen & Y. Zhang ter ,Tyrannosorus hanlinianus (U. Braun & Feiler) Crous, M. Shen & Y. Zhang ter ,Neocoleroa cameroonensis Crous, M. Shen & Y. Zhang ter ,Fagicola fagi (Crous & de Hoog) Crous, M. Shen & Y. Zhang ter ,Sterila eucalypti Crous, M. Shen & Y. Zhang ter ,Bellamyces Crous, Coppins & U. Braun ,Scolecobasidium dracaenae (Crous) Crous, M. Shen & Y. Zhang ter ,Neofusicladium regnans (Crous) Crous, M. Shen & Y. Zhang ter ,Fuscohil`um Crous, M. Shen & Y. Zhang ter ,Pinaceicola Crous, M. Shen & Y. Zhang ter ,Article ,Venturia quebecensis Crous, M. Shen & Y. Zhang ter ,Pinaceicola pini(Crous & de Hoog) Crous, M. Shen & Y. Zhang ter ,Pseudosigmoidea excentrica (R.F. Castañeda et al.) Crous, M. Shen & Y. Zhang ter ,Fuscohilum Crous, M. Shen & Y. Zhang ter ,Scolecobasidium capsici (Crous & Cheew.) Crous, M. Shen & Y. Zhang ter ,New taxa ,Systematics ,Venturia albae Crous, M. Shen & Y. Zhang ter ,Parafusicladium paraamoenum (Crous et al.) Crous, M. Shen & Y. Zhang ter ,Scolecobasidium globale (Samerp. et al.) Crous, M. Shen & Y. Zhang ter ,Scolecobasidium ramosum (A. Giraldo et al.) Crous, M. Shen & Y. Zhang ter ,Verruconis terricola (J. Ren et al.) Crous, M. Shen & Y. Zhang ter ,Multigene analysis ,Parafusicladium Crous, M. Shen & Y. Zhang ter ,Neofusicladium Crous, M. Shen & Y. Zhang ter ,Scolecobasidium macrozamiae (Crous & R.G. Shivas) Crous, M. Shen & Y. Zhang ter ,Fraxinicola europaea Crous, M. Shen & Y. Zhang ter ,Scolecobasidium pandanicola (Crous & M.J. Wingf.) Crous, M. Shen & Y. Zhang ter ,Sterila Crous, M. Shen & Y. Zhang ter ,Niesslia vaccinii (Ellis & Everh.) Crous, M. Shen & Y. Zhang ter ,Fagicola Crous, M. Shen & Y. Zhang ter ,Scolecobasidium robustum (Samerp. et al.) Crous, M. Shen & Y. Zhang ter ,lcsh:Biology (General) ,Sympoventuria africana (Crous) Crous, M. Shen & Y. Zhang ter ,Venturia finlandica Crous, M. Shen & Y. Zhang ter ,Parafusicladium intermedium (Crous & W.B. Kendr.) Crous, M. Shen & Y. Zhang ter ,Fraxinicola italica Crous, M. Shen & Y. Zhang ter ,Scolecobasidium minimum (Fassat.) Crous, M. Shen & Y. Zhang ter ,Niesslia parasitica (Ellis & Everh.) M. Shen & Y. Zhang ter - Abstract
Members of Venturiales (Dothideomycetes) are widely distributed, and comprise saprobes, as well as plant, human and animal pathogens. In spite of their economic importance, the general lack of cultures and DNA data has resulted in taxa being poorly resolved. In the present study five loci, ITS, LSU rDNA, tef1, tub2 and rpb2 are used for analysing 115 venturialean taxa representing 30 genera in three families in the current classification of Venturiales. Based on the multigene phylogenetic analysis, morphological and ecological characteristics, one new family, Cylindrosympodiaceae, and eight new genera are described, namely Bellamyces, Fagicola, Fraxinicola, Fuscohilum, Neofusicladium, Parafusicladium, Pinaceicola and Sterila. In addition, 12 species are described as new to science, and 41 new combinations are proposed. The taxonomic status of 153 species have been re-evaluated with 20 species excluded from Venturiales. Based on this revision of Venturiales, morphological characteristics such as conidial arrangement (solitary or in chains) or conidiogenesis (blastic-solitary, sympodial or annellidic), proved to be significant at generic level. Venturia as currently defined represents a generic complex. Furthermore, plant pathogens appear more terminal in phylogenetic analyses within Venturiaceae and Sympoventuriaceae, suggesting that the ancestral state of Venturiales is most likely saprobic.
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- 2020
55. Fungal Planet 1043 – 29 June 2020
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Crous, P.W., Wingfield, M.J., Chooi, Y.-H., Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., Valenzuela-Lopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjević, Ž., Kachalkin, A.V., Lebel, T., Lock, C., Martín, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, T.E., De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodríguez, A., Rodríguez-Andrade, E., Semwal, K.C., Tegart, L., Abad, Z.G., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballarà, J., Barrett, M.D., Berná, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chávez, R., Čmoková, A., Dearnaley, J.D.W., de A. Santiago, A.L.C.M., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventós, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Cañete-Gibas, C.F., Gil-Durán, C., Glushakova, A.M., Gonçalves, M.F.M., González, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutiérrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inácio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kisło, K., Kiss, L., Kiyashko, A., Kolařík, M., Kruse, J., Kubátová, A., Kučera, V., Kučerová, I., Kušan, I., Lee, H.B., Levicán, G., Lewis, A., Liem, N.V., Liimatainen, K., Lim, H.J., Lyons, M.N., Maciá-Vicente, J.G., Magaña-Dueñas, V., Mahiques, R., Malysheva, E.F., Marbach, P.A.S., Marinho, P., Matočec, N., McTaggart, A.R., Mešić, A., Morin, L., Muñoz-Mohedano, J.M., Navarro-Ródenas, A., Nicolli, C.P., Oliveira, R.L., Otsing, E., Ovrebo, C.L., Pankratov, T.A., Paños, A., Paz-Conde, A., Pérez-Sierra, A., Phosri, C., Pintos, Á., Pošta, A., Prencipe, S., Rubio, E., Saitta, A., Sales, L.S., Sanhueza, L., Shuttleworth, L.A., Smith, J., Smith, M.E., Spadaro, D., Spetik, M., Sochor, M., Sochorová, Z., Sousa, J.O., Suwannasai, N., Tedersoo, L., Thanh, H.M., Thao, L.D., Tkalčec, Z., Vaghefi, N., Venzhik, A.S., Verbeken, A., Vizzini, A., Voyron, S., Wainhouse, M., Whalley, A.J.S., Wrzosek, M., Zapata, M., Zeil-Rolfe, I., Groenewald, J.Z., Crous, Pedro W., Groenewald, Johannes Z., Wingfield, Michael J., Roets, Francois, Swart, Wijnand J., Akulov, Alex, Smith, Jason, Lombard, Lorenzo, Wainhouse, Matt, Douglas, Brian, Denman, Sandra, Johnston, Peter R., Jurjević, Željko, Kolařík, Miroslav, Hubka, Vit, Suwannasai, Nuttika, Martín, María P., Phosri, Cherdchai, Whalley, Anthony J.S., Pitt, John I., Lacey, Ernest, Gilchrist, Cameron L.M., Chooi, Yit-Heng, Figueiredo, Cristiane Nascimento, Sales, Lucas Souza, Andrade, Jackeline Pereira, Figueiredo, Yasmim Freitas, De Souza, Jorge Teodoro, Lacey, Heather J., Hocking, Ailsa D., de L. Oliveira, Renan, Ferreira, Renato J., Lúcio, Paulo Sérgio Marinho, Baseia, Iuri G., Glushakova, Anna M., Tomashevskaya, Maria A., Kachalkin, Aleksey V., Maciá-Vicente, Jose G., Gil-Durán, Carlos, Levicán, Gloria, Chávez, Renato, Sanhueza, Loreto, Ferrer, Alonso, Dima, Bálint, Semwal, Kamal C., Papp, Viktor, Brandrud, Tor Erik, Bhatt, Vinod K., Garrido-Benavent, Isaac, Ballarà, Josep, Liimatainen, Kare, Mahiques, Rafael, Pintos, Ángel, González, Marta, Alvarado, Pablo, Rubio, Enrique, Shuttleworth, Lucas A., Lewis, Alex, Gorton, Caroline, Pérez-Sierra, Ana, Thao, Le Dinh, Hien, Le Thu, Van Liem, Nguyen, Thanh, Ha Minh, Khanh, Tran Ngoc, Saitta, Alessandro, Tedersoo, Leho, Otsing, Eveli, Paz-Conde, Aurelia, Kiss, Levente, Vaghefi, Niloofar, Dearnaley, John D.W., Kelly, Lisa, Bransgrove, Kaylene, Rodríguez-Andrade, Ernesto, Cano-Lira, José F., Stchigel, Alberto M., de Freitas Neto, Julimar F., Sousa, Julieth O., Ovrebo, Clark L., Lee, Hyang Burm, Lim, Hyo Jin, de A. Santiago, André Luiz C.M, Nicolli, Camila Primieri, Carmo, Filipe Sandin, Inácio, Carlos Antonio, Marbach, Phellippe Arthur Santos, Kučera, Viktor, Fedosova, Anna G., Sochorová, Zuzana, Sochor, Michal, Pankratov, Timofey A., Reinoso-Fuentealba, Cintia, Bianchinotti, M. Virginia, Lebel, Teresa, Tegart, Lachlan, Verbeken, Annemieke, Gorczak, Michał, Kisło, Kamil, Wrzosek, Marta, Kruse, Julia, Shivas, Roger G., McTaggart, Alistair R., Lyons, Michael N., Dovana, Francesco, Voyron, Samuele, Vizzini, Alfredo, Ferisin, Giuliano, Raventós, Fernando Esteve, Guard, Frances E., Barrett, Matthew D., Farid, Arian, Smith, Matthew E., Lock, Claire, Vitelli, Joseph S., Holdom, David, Tan, Yu Pei, Kušan, Ivana, Matočec, Neven, Pošta, Ana, Tkalčec, Zdenko, Mešić, Armin, Valenzuela-Lopez, Nicomedes, Guarro, Josep, Čmoková, Adéla, Gonçalves, Micael F.M., Alves, Artur, Spetik, Milan, Berraf-Tebbal, Akila, Eichmeier, Ales, andZcaron, Jurjeviandcacute, eljko, Kučerová, Ivana, Kubátová, Alena, Gibas, Connie F.C., Hamal, Petr, Prencipe, Simona, Spadaro, Davide, Houbraken, Jos, Zapata, Mario, Asenjo, Claudia, Gutiérrez, Mónica, Burgess, Treena I., Abad, Z. Gloria, Kiyashko, Anna, Magaña-Dueñas, Viridiana, Rodríguez, Antonio, Navarro-Ródenas, Alfonso, Arenas, Francisco, Guarnizo, Angel Luigi, Morte, Asunción, Berná, Luis Miguel, Paños, Angela, Muñoz-Mohedano, Justo M., Hunter, Gavin C., Zeil-Rolfe, Isabel, Morin, Louise, Jourdan, Mireille, Venzhik, Aleksandra S., Kapitonov, Vladimir I., and Malysheva, Ekaterina F.
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ITS nrDNA barcodes ,LSU ,Fungal Planet description sheets ,systematics ,new taxa ,Research Article - Abstract
Novel species of fungi described in this study include those from various countries as follows: Antarctica, Cladosporium arenosum from marine sediment sand. Argentina, Kosmimatamyces alatophylus (incl. Kosmimatamyces gen. nov.) from soil. Australia, Aspergillus banksianus, Aspergillus kumbius, Aspergillus luteorubrus, Aspergillus malvicolor and Aspergillus nanangensis from soil, Erysiphe medicaginis from leaves of Medicago polymorpha, Hymenotorrendiella communis on leaf litter of Eucalyptus bicostata, Lactifluus albopicri and Lactifluus austropiperatus on soil, Macalpinomyces collinsiae on Eriachne benthamii, Marasmius vagus on soil, Microdochium dawsoniorum from leaves of Sporobolus natalensis, Neopestalotiopsis nebuloides from leaves of Sporobolus elongatus, Pestalotiopsis etonensis from leaves of Sporobolus jacquemontii, Phytophthora personensis from soil associated with dying Grevillea mccutcheonii. Brazil, Aspergillus oxumiae from soil, Calvatia baixaverdensis on soil, Geastrum calycicoriaceum on leaf litter, Greeneria kielmeyerae on leaf spots of Kielmeyera coriacea. Chile, Phytophthora aysenensis on collar rot and stem of Aristotelia chilensis. Croatia, Mollisia gibbospora on fallen branch of Fagus sylvatica. Czech Republic, Neosetophoma hnaniceana from Buxus sempervirens. Ecuador, Exophiala frigidotolerans from soil. Estonia, Elaphomyces bucholtzii in soil. France, Venturia paralias from leaves of Euphorbia paralias. India, Cortinarius balteatoindicus and Cortinarius ulkhagarhiensis on leaf litter. Indonesia, Hymenotorrendiella indonesiana on Eucalyptus urophylla leaf litter. Italy, Penicillium taurinense from indoor chestnut mill. Malaysia, Hemileucoglossum kelabitense on soil, Satchmopsis pini on dead needles of Pinus tecunumanii. Poland, Lecanicillium praecognitum on insects’ frass. Portugal, Neodevriesia aestuarina from saline water. Republic of Korea, Gongronella namwonensis from freshwater. Russia, Candida pellucida from Exomias pellucidus, Heterocephalacria septentrionalis as endophyte from Cladonia rangiferina, Vishniacozyma phoenicis from dates fruit, Volvariella paludosa from swamp. Slovenia, Mallocybe crassivelata on soil. South Africa, Beltraniella podocarpi, Hamatocanthoscypha podocarpi, Coleophoma podocarpi and Nothoseiridium podocarpi (incl. Nothoseiridium gen. nov.) from leaves of Podocarpus latifolius, Gyrothrix encephalarti from leaves of Encephalartos sp., Paraphyton cutaneum from skin of human patient, Phacidiella alsophilae from leaves of Alsophila capensis, and Satchmopsis metrosideri on leaf litter of Metrosideros excelsa. Spain, Cladophialophora cabanerensis from soil, Cortinarius paezii on soil, Cylindrium magnoliae from leaves of Magnolia grandiflora, Trichophoma cylindrospora (incl. Trichophoma gen. nov.) from plant debris, Tuber alcaracense in calcareus soil, Tuber buendiae in calcareus soil. Thailand, Annulohypoxylon spougei on corticated wood, Poaceascoma filiforme from leaves of unknown Poaceae. UK, Dendrostoma luteum on branch lesions of Castanea sativa, Ypsilina buttingtonensis from heartwood of Quercus sp. Ukraine, Myrmecridium phragmiticola from leaves of Phragmites australis. USA, Absidia pararepens from air, Juncomyces californiensis (incl. Juncomyces gen. nov.) from leaves of Juncus effusus, Montagnula cylindrospora from a human skin sample, Muriphila oklahomaensis (incl. Muriphila gen. nov.) on outside wall of alcohol distillery, Neofabraea eucalyptorum from leaves of Eucalyptus macrandra, Diabolocovidia claustri (incl. Diabolocovidia gen. nov.) from leaves of Serenoa repens, Paecilomyces penicilliformis from air, Pseudopezicula betulae from leaves of leaf spots of Populus tremuloides. Vietnam, Diaporthe durionigena on branches of Durio zibethinus and Roridomyces pseudoirritans on rotten wood. Morphological and culture characteristics are supported by DNA barcodes.
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- 2020
56. Pilidiella tibouchinae sp. nov. associated with foliage blight of Tibouchina granulosa (quaresmeira) in Brazil
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B.E.C. Miranda, R.W. Barreto, P.W. Crous, and J.Z. Groenewald
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Coniella ,Diaporthales ,ITS ,LSU ,Sordariomycetes ,systematics ,Botany ,QK1-989 - Abstract
Tibouchina granulosa (Melastomataceae), Brazilian glorytree (Brazilian common name – quaresmeira), a common tree of the Atlantic Forest of Brazil, is widely used as an ornamental for its violet or pink blossoms. Little is known about fungal diseases affecting this species, although these represent a known limitation for its cultivation in nurseries. Among these there is a foliage blight that occurs in combination with distortion of branch apices and die-back. A consistent association of a species of Pilidiella with the diseased tissues was observed. The fungus was isolated in pure culture and based on its morphology and DNA phylogeny, we conclude that it represents a new species, for which the name Pilidiella tibouchinae is introduced.
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- 2012
57. Fungal Planet 953 – 18 December 2019
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Crous, P.W., Wingfield, M.J., Lombard, L., Roets, F., Swart, W.J., Alvarado, P., Carnegie, A.J., Moreno, G., Luangsaard, J., Thangavel, R., Alexandrova, A.V., Baseia, I.G., Bellanger, J.-M., Bessette, A.E., Bessette, A.R., De la Peña-Lastra, S., García, D., Gené, J., Pham, T.H.G., Heykoop, M., Malysheva, E., Malysheva, V., Martín, M.P., Morozova, O.V., Noisripoom, W., Overton, B.E., Rea, A.E., Sewall, B.J., Smith, M.E., Smyth, C.W., Tasanathai, K., Visagie, C.M., Adamčík, S., Alves, A., Andrade, J.P., Aninat, M.J., Araújo, R.V.B., Bordallo, J.J., Boufleur, T., Baroncelli, R., Barreto, R.W., Bolin, J., Cabero, J., Caboň, M., Cafà, G., Caffot, M.L.H., Cai, L., Carlavilla, J.R., Chávez, R., de Castro, R.R.L., Delgat, L., Deschuyteneer, D., Dios, M.M., Domínguez, L.S., Evans, H.C., Eyssartier, G., Ferreira, B.W., Figueiredo, C.N., Liu, F., Fournier, J., Galli-Terasawa, L.V., Gil-Durán, C., Glienke, C., Gonçalves, M.F.M., Gryta, H., Guarro, J., Himaman, W., Hywel-Jones, N., Iturrieta-González, I., Ivanushkina, N.E., Jargeat, P., Khalid, A.N., Khan, J., Kiran, M., Kiss, L., Kochkina, G.A., Kolařík, M., Kubátová, A., Lodge, D.J., Loizides, M., Luque, D., Manjón, J.L., Marbach, P.A.S., Massola, N.S., Mata, M., Miller, A.N., Mongkolsamrit, S., Moreau, P.-A., Morte, A., Mujic, A., Navarro-Ródenas, A., Németh, M.Z., Nóbrega, T.F., Nováková, A., Olariaga, I., Ozerskaya, S.M., Palma, M.A., Petters-Vandresen, D.A.L., Piontelli, E., Popov, E.S., Rodríguez, A., Requejo, Ó., Rodrigues, A.C.M., Rong, I.H., Roux, J., Seifert, K.A., Silva, B.D.B., Sklenář, F., Smith, J.A., Sousa, J.O., Souza, H.G., De Souza, J.T., Švec, K., Tanchaud, P., Tanney, J.B., Terasawa, F., Thanakitpipattana, D., Torres-Garcia, D., Vaca, I., Vaghefi, N., van Iperen, A.L., Vasilenko, O.V., Verbeken, A., Yilmaz, N., Zamora, J.C., Zapata, M., Jurjević, Ž., Groenewald, J.Z., Crous, Pedro W., van Iperen, Arien L., Groenewald, Johannes Z., Thangavel, Raja, Carnegie, Angus J., Wingfield, Michael J., Roux, Jolanda, Jurjević, Željko, Roets, Francois, Swart, Wijnand J., Smith, Jason A., Lombard, Lorenzo, Moreno, Gabriel, Carlavilla, Juan Ramón, Manjón, José Luis, Bellanger, Jean-Michel, Olariaga, Ibai, Giang, Pham Thi Ha, Alexandrova, Alina V., Morozova, Olga V., Rodrigues, Ana C.M., Baseia, Iuri G., Martín, María P., De la Peña-Lastra, Saúl, Alvarado, Pablo, Requejo, Óscar, Tanchaud, Patrice, Eyssartier, Guillaume, Jargeat, Patricia, Gryta, Hervé, Gil-Durán, Carlos, Chávez, Renato, Vaca, Inmaculada, Loizides, Michael, Moreau, Pierre-Arthur, Zapata, Mario, Palma, María Antonieta, Aninat, María José, Piontelli, Eduardo, Luangsa-ard, Jennifer, Tasanathai, Kanoksri, Noisripoom, Wasana, Hywel-Jones, Nigel, Mongkolsamrit, Suchada, Luangsa-ard, Janet Jennifer, Himaman, Winanda, Garcia, Daniel Torres, Guarro, Josep, Gené, Josepa, Petters-Vandresen, Desirrê Alexia Lourenço, Galli-Terasawa, Lygia Vitória, Terasawa, Francisco, Glienke, Chirlei, Araújo, Ruane V.B., Silva, Bianca D.B., Sousa, Julieth O., Zamora, Juan Carlos, Dios, Maria Martha, Caffot, María Luciana Hernández, Domínguez, Laura S., Kiss, Levente, Vaghefi, Niloofar, Németh, Márk Z., Miller, Andrew N., Fournier, Jacques, Nóbrega, Thaisa F., Ferreira, Bruno W., Barreto, Robert W., Evans, Harry C., Delgat, Lynn, Verbeken, Annemieke, Lodge, D. Jean, Thanakitpipattana, Donnaya, Visagie, Cobus M., Rong, Isabel H., Andrade, Jackeline Pereira, Marbach, Phellippe Arthur Santos, De Souza, Jorge Teodoro, Malysheva, Ekaterina, Malysheva, Vera, Deschuyteneer, Daniel, Heykoop, Michel, Mata, Milagro, Rea, Abigail E., Smyth, Christopher W., Overton, Barrie E., Sewall, Brent J., Smith, Matthew E., Mujic, Alija, Bolin, Jason, Bessette, Arleen, Bessette, Alan, Kiran, Munazza, Khalid, Abdul Nasir, Khan, Junaid, Adamčík, Slavomír, Caboň, Miroslav, Liu, Fang, Cai, Lei, Tanney, Joey B., Seifert, Keith A., Baroncelli, Riccardo, Cafà, Giovanni, de Castro, Renata Rebellato Linhares, Boufleur, Thais, Junior, Nelson Sidnei Massola, Yilmaz, Neriman, Nováková, Alena, Švec, Karel, Sklenář, František, Kolařík, Miroslav, Kubátová, Alena, Rodríguez, Antonio, Navarro-Ródenas, Alfonso, Morte, Asunción, Cabero, Julio, Luque, Diego, Gonçalves, Micael F.M., Alves, Artur, Bordallo, Juan Julián, Pham, Thi Ha Giang, Popov, Eugene S., Iturrieta-González, Isabel, García, Dania, Ivanushkina, Nataliya E., Kochkina, Galina A., Vasilenko, Oleg V., and Ozerskaya, Svetlana M.
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ITS nrDNA barcodes ,LSU ,Fungal Planet description sheets ,systematics ,new taxa ,Research Article - Abstract
Novel species of fungi described in this study include those from various countries as follows: Antarctica, Apenidiella antarctica from permafrost, Cladosporium fildesense from an unidentified marine sponge. Argentina, Geastrum wrightii on humus in mixed forest. Australia, Golovinomyces glandulariae on Glandularia aristigera, Neoanungitea eucalyptorum on leaves of Eucalyptus grandis, Teratosphaeria corymbiicola on leaves of Corymbia ficifolia, Xylaria eucalypti on leaves of Eucalyptus radiata. Brazil, Bovista psammophila on soil, Fusarium awaxy on rotten stalks of Zea mays, Geastrum lanuginosum on leaf litter covered soil, Hermetothecium mikaniae-micranthae (incl. Hermetothecium gen. nov.) on Mikania micrantha, Penicillium reconvexovelosoi in soil, Stagonosporopsis vannaccii from pod of Glycine max. British Virgin Isles, Lactifluus guanensis on soil. Canada, Sorocybe oblongispora on resin of Picea rubens. Chile, Colletotrichum roseum on leaves of Lapageria rosea. China, Setophoma caverna from carbonatite in Karst cave. Colombia, Lareunionomyces eucalypticola on leaves of Eucalyptus grandis. Costa Rica, Psathyrella pivae on wood. Cyprus, Clavulina iris on calcareous substrate. France, Chromosera ambigua and Clavulina iris var. occidentalis on soil. French West Indies, Helminthosphaeria hispidissima on dead wood. Guatemala, Talaromyces guatemalensis in soil. Malaysia, Neotracylla pini (incl. Tracyllales ord. nov. and Neotracylla gen. nov.) and Vermiculariopsiella pini on needles of Pinus tecunumanii. New Zealand, Neoconiothyrium viticola on stems of Vitis vinifera, Parafenestella pittospori on Pittosporum tenuifolium, Pilidium novae-zelandiae on Phoenix sp. Pakistan, Russula quercus-floribundae on forest floor. Portugal, Trichoderma aestuarinum from saline water. Russia, Pluteus liliputianus on fallen branch of deciduous tree, Pluteus spurius on decaying deciduous wood or soil. South Africa, Alloconiothyrium encephalarti, Phyllosticta encephalarticola and Neothyrostroma encephalarti (incl. Neothyrostroma gen. nov.) on leaves of Encephalartos sp., Chalara eucalypticola on leaf spots of Eucalyptus grandis × urophylla, Clypeosphaeria oleae on leaves of Olea capensis, Cylindrocladiella postalofficium on leaf litter of Sideroxylon inerme, Cylindromonium eugeniicola (incl. Cylindromonium gen. nov.) on leaf litter of Eugenia capensis, Cyphellophora goniomatis on leaves of Gonioma kamassi, Nothodactylaria nephrolepidis (incl. Nothodactylaria gen. nov. and Nothodactylariaceae fam. nov.) on leaves of Nephrolepis exaltata, Falcocladium eucalypti and Gyrothrix eucalypti on leaves of Eucalyptus sp., Gyrothrix oleae on leaves of Olea capensis subsp. macrocarpa, Harzia metrosideri on leaf litter of Metrosideros sp., Hippopotamyces phragmitis (incl. Hippopotamyces gen. nov.) on leaves of Phragmites australis, Lectera philenopterae on Philenoptera violacea, Leptosillia mayteni on leaves of Maytenus heterophylla, Lithohypha aloicola and Neoplatysporoides aloes on leaves of Aloe sp., Millesimomyces rhoicissi (incl. Millesimomyces gen. nov.) on leaves of Rhoicissus digitata, Neodevriesia strelitziicola on leaf litter of Strelitzia nicolai, Neokirramyces syzygii (incl. Neokirramyces gen. nov.) on leaf spots of Syzygium sp., Nothoramichloridium perseae (incl. Nothoramichloridium gen. nov. and Anungitiomycetaceae fam. nov.) on leaves of Persea americana, Paramycosphaerella watsoniae on leaf spots of Watsonia sp., Penicillium cuddlyae from dog food, Podocarpomyces knysnanus (incl. Podocarpomyces gen. nov.) on leaves of Podocarpus falcatus, Pseudocercospora heteropyxidicola on leaf spots of Heteropyxis natalensis, Pseudopenidiella podocarpi, Scolecobasidium podocarpi and Ceramothyrium podocarpicola on leaves of Podocarpus latifolius, Scolecobasidium blechni on leaves of Blechnum capense, Stomiopeltis syzygii on leaves of Syzygium chordatum, Strelitziomyces knysnanus (incl. Strelitziomyces gen. nov.) on leaves of Strelitzia alba, Talaromyces clemensii from rotting wood in goldmine, Verrucocladosporium visseri on Carpobrotus edulis. Spain, Boletopsis mediterraneensis on soil, Calycina cortegadensisi on a living twig of Castanea sativa, Emmonsiellopsis tuberculata in fluvial sediments, Mollisia cortegadensis on dead attached twig of Quercus robur, Psathyrella ovispora on soil, Pseudobeltrania lauri on leaf litter of Laurus azorica, Terfezia dunensis in soil, Tuber lucentum in soil, Venturia submersa on submerged plant debris. Thailand, Cordyceps jakajanicola on cicada nymph, Cordyceps kuiburiensis on spider, Distoseptispora caricis on leaves of Carex sp., Ophiocordyceps khonkaenensis on cicada nymph. USA, Cytosporella juncicola and Davidiellomyces juncicola on culms of Juncus effusus, Monochaetia massachusettsianum from air sample, Neohelicomyces melaleucae and Periconia neobrittanica on leaves of Melaleuca styphelioides × lanceolata, Pseudocamarosporium eucalypti on leaves of Eucalyptus sp., Pseudogymnoascus lindneri from sediment in a mine, Pseudogymnoascus turneri from sediment in a railroad tunnel, Pulchroboletus sclerotiorum on soil, Zygosporium pseudomasonii on leaf of Serenoa repens. Vietnam, Boletus candidissimus and Veloporphyrellus vulpinus on soil. Morphological and culture characteristics are supported by DNA barcodes.
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- 2019
58. Fusarium chuoi R. Hill, Gaya, D.T. Vu, Sand.-Den. & Crous, R. Hill, Gaya, D.T. Vu, Sand.-Den. & Crous sp. nov
- Author
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Crous, P.W., Osieck, E.R., Jurjevi, ��, Boers, J., Van Iperen, A.L., Starink-Willemse, M., Dima, B., Balashov, S., Bulgakov, T.S., Johnston, P.R., Morozova, O.V., Pinruan, U., Sommai, S., Alvarado, P., Decock, C.A., Lebel, T., McMullan-Fisher, S., Moreno, G., Shivas, R.G., Zhao, L., Abdollahzadeh, J., Abrinbana, M., Ageev, D.V., Akhmetova, G., Alexandrova, A.V., Alt��s, A., Amaral, A.G.G., Angelini, C., Anton��n, V., Arenas, F., Asselman, P., Badali, F., Baghela, A., Ba��ares, A., Barreto, R.W., Baseia, I.G., Bellanger, J.-M., Berraf-Tebbal, A., Biketova, A. Yu., Bukharova, N.V., Burgess, T.I., Cabero, J., C��mara, M.P.S., Cano-Lira, J.F., Ceryngier, P., Ch��vez, R., Cowan, D.A., de Lima, A.F., Oliveira, R.L., Denman, S., Dang, Q.N., Dovana, F., Duarte, I.G., Eichmeier, A., Erhard, A., Esteve-Ravent��s, F., Fellin, A., Ferisin, G., Ferreira, R.J., Ferrer, A., Finy, P., Gaya, E., Geering, A.D.W., Gil-Dur��n, C., Gl��ssnerov��, K., Glushakova, A.M., Gramaje, D., Guard, F.E., Guarnizo, A.L., Haelewaters, D., Halling, R.E., Hill, R., Hirooka, Y., Hubka, V., Iliushin, V.A., Ivanova, D.D., Ivanushkina, N.E., Jangsantear, P., Justo, A., Kachalkin, A.V., Kato, S., Khamsuntorn, P., Kirtsideli, I.Y., Knapp, D.G., Kochkina, G.A., Koukol, O., Kov��cs, G.M., Kruse, J., Kumar, T.K.A., Ku��an, I., L��ss��e, T., Larsson, E., Lebeuf, R., Levic��n, G., Loizides, M., Marinho, P., Luangsa-ard, J.J., Lukina, E.G., Maga��a-Due��as, V., Maggs-K��lling, G., Malysheva, E.F., Malysheva, V.F., Mart��n, B., Mart��n, M.P., Mato��ec, N., McTaggart, A.R., Mehrabi-Koushki, M., Me��i��, A., Miller, A.N., Mironova, P., Moreau, P.-A., Morte, A., M��ller, K., Nagy, L.G., Nanu, S., Navarro-R��denas, A., Nel, W.J., Nguyen, T.H., N��brega, T.F., Noordeloos, M.E., Olariaga, I., Overton, B.E., Ozerskaya, S.M., Palani, P., Pancorbo, F., Papp, V., Paw��owska, J., Pham, T.Q., Phosri, C., Popov, E.S., Portugal, A., Po��ta, A., Reschke, K., Reul, M., Ricci, G.M., Rodr��guez, A., Romanowski, J., Ruchikachorn, N., Saar, I., Safi, A., Sakolrak, B., Salzmann, F., Sandoval-Denis, M., Sangwichein, E., Sanhueza, L., Sato, T., Sastoque, A., Senn-Irlet, B., Shibata, A., Siepe, K., Somrithipol, S., Spetik, M., Sridhar, P., Stchigel, A.M., Stuskova, K., Suwannasai, N., Tan, Y.P., Thangavel, R., Tiago, I., Tiwari, S., Tkal��ec, Z., Tomashevskaya, M.A., Tonegawa, C., Tran, H.X., Tran, N.T., Trov��o, J., Trubitsyn, V.E., Van Wyk, J., Vieira, W.A.S., Vila, J., Visagie, C.M., Vizzini, A., Volobuev, S.V., Vu, D.T., Wangsawat, N., Yaguchi, T., Ercole, E., Ferreira, B.W., de Souza, A.P., Vieira, B.S., and Groenewald, J.Z.
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Ascomycota ,Sordariomycetes ,Hypocreales ,Fungi ,Nectriaceae ,Biodiversity ,Taxonomy - Abstract
Crous, P.W., Osieck, E.R., Jurjevi, ��, Boers, J., Van Iperen, A.L., Starink-Willemse, M., Dima, B., Balashov, S., Bulgakov, T.S., Johnston, P.R., Morozova, O.V., Pinruan, U., Sommai, S., Alvarado, P., Decock, C.A., Lebel, T., McMullan-Fisher, S., Moreno, G., Shivas, R.G., Zhao, L., Abdollahzadeh, J., Abrinbana, M., Ageev, D.V., Akhmetova, G., Alexandrova, A.V., Alt��s, A., Amaral, A.G.G., Angelini, C., Anton��n, V., Arenas, F., Asselman, P., Badali, F., Baghela, A., Ba��ares, A., Barreto, R.W., Baseia, I.G., Bellanger, J.-M., Berraf-Tebbal, A., Biketova, A. Yu., Bukharova, N.V., Burgess, T.I., Cabero, J., C��mara, M.P.S., Cano-Lira, J.F., Ceryngier, P., Ch��vez, R., Cowan, D.A., de Lima, A.F., Oliveira, R.L., Denman, S., Dang, Q.N., Dovana, F., Duarte, I.G., Eichmeier, A., Erhard, A., Esteve-Ravent��s, F., Fellin, A., Ferisin, G., Ferreira, R.J., Ferrer, A., Finy, P., Gaya, E., Geering, A.D.W., Gil-Dur��n, C., Gl��ssnerov��, K., Glushakova, A.M., Gramaje, D., Guard, F.E., Guarnizo, A.L., Haelewaters, D., Halling, R.E., Hill, R., Hirooka, Y., Hubka, V., Iliushin, V.A., Ivanova, D.D., Ivanushkina, N.E., Jangsantear, P., Justo, A., Kachalkin, A.V., Kato, S., Khamsuntorn, P., Kirtsideli, I.Y., Knapp, D.G., Kochkina, G.A., Koukol, O., Kov��cs, G.M., Kruse, J., Kumar, T.K.A., Ku��an, I., L��ss��e, T., Larsson, E., Lebeuf, R., Levic��n, G., Loizides, M., Marinho, P., Luangsa-ard, J.J., Lukina, E.G., Maga��a-Due��as, V., Maggs-K��lling, G., Malysheva, E.F., Malysheva, V.F., Mart��n, B., Mart��n, M.P., Mato��ec, N., McTaggart, A.R., Mehrabi-Koushki, M., Me��i��, A., Miller, A.N., Mironova, P., Moreau, P.-A., Morte, A., M��ller, K., Nagy, L.G., Nanu, S., Navarro-R��denas, A., Nel, W.J., Nguyen, T.H., N��brega, T.F., Noordeloos, M.E., Olariaga, I., Overton, B.E., Ozerskaya, S.M., Palani, P., Pancorbo, F., Papp, V., Paw��owska, J., Pham, T.Q., Phosri, C., Popov, E.S., Portugal, A., Po��ta, A., Reschke, K., Reul, M., Ricci, G.M., Rodr��guez, A., Romanowski, J., Ruchikachorn, N., Saar, I., Safi, A., Sakolrak, B., Salzmann, F., Sandoval-Denis, M., Sangwichein, E., Sanhueza, L., Sato, T., Sastoque, A., Senn-Irlet, B., Shibata, A., Siepe, K., Somrithipol, S., Spetik, M., Sridhar, P., Stchigel, A.M., Stuskova, K., Suwannasai, N., Tan, Y.P., Thangavel, R., Tiago, I., Tiwari, S., Tkal��ec, Z., Tomashevskaya, M.A., Tonegawa, C., Tran, H.X., Tran, N.T., Trov��o, J., Trubitsyn, V.E., Van Wyk, J., Vieira, W.A.S., Vila, J., Visagie, C.M., Vizzini, A., Volobuev, S.V., Vu, D.T., Wangsawat, N., Yaguchi, T., Ercole, E., Ferreira, B.W., de Souza, A.P., Vieira, B.S., Groenewald, J.Z. 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59. What is Scirrhia?
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P.W. Crous, A.W. Minnis, O.L. Pereira, A.C. Alfenas, R.F. Alfenas, A.Y. Rossman, and J.Z. Groenewald
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Brazil ,Capnodiales ,Dothideomycetes ,ITS ,LSU ,Mycosphaerellaceae ,Pteridium ,systematics ,Botany ,QK1-989 - Abstract
The ascomycetous genus Scirrhia is presently treated as a member of Dothideomycetidae, though uncertainty remains as to which family it belongs in Capnodiales, Ascomycota. Recent collections on stems of a fern, Pteridium aquilinum (Dennstaedtiaceae) in Brazil, led to the discovery of a new species of Scirrhia, described here as S. brasiliensis. Based on DNA sequence data of the nuclear ribosomal DNA (LSU), Scirrhia is revealed to represent a member of Dothideomycetes, Capnodiales, Mycosphaerellaceae. Scirrhia is the first confirmed genus in Mycosphaerellaceae to have well developed pseudoparaphyses and a prominent hypostroma in which ascomata are arranged in parallel rows. Given the extremely slow growth rate and difficulty in obtaining cultures of S. brasiliensis on various growth media, it appears that Scirrhia represents a genus of potentially obligate plant pathogens within Mycosphaerellaceae.
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- 2011
60. Additions to the Mycosphaerella complex
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P.W. Crous, K. Tanaka, B.A. Summerel, and J.Z. Groenewald
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ANTHRACOSTROMA ,CAMAROSPORULA ,CLADOSPORIUM ,MYCOSPHAEREL/A ,PHYLOGENY ,SPHAERULINA ,TAXONOMY ,TERATOSPHAERIA ,Botany ,QK1-989 - Abstract
Species in the present study were compared based on their morphology, growth characteristics in culture, and DNA sequences of the nuclear ribosomal RNA gene operon (including ITS1, ITS2, 5.8S nrDNA and the first 900 bp of the 28S nrDNA) for all species and partial actin and translation elongation factor 1-alpha gene sequences for Cladosporium species. New species of Mycosphaerel/a (Mycosphaerel/aceae) introduced in this study include M. cerastiicola (on Cerastium semidecandrum, The Netherlands), and M. etlingerae (on Etlingera e/atior, Hawaii). Mycosphaerel/a holualoana is newly reported on Hedychium coronarium (Hawaii). Epitypes are also designated for Hendersonia persooniae, the basionym of Camarosporula persooniae, and for Sphaerel/a agapanthi, the basionym of Teratosphaeria agapanthi comb. nov. (Teratosphaeriaceae) on Agapathus umbel/atus from South Africa. The latter pathogen is also newly recorded from A. umbel/atus in Europe (Portugal). Furthermore, two sexual species of Cladosporium (Davidiel/aceae) are described, namely C. grevil/eae (on Grevil/ea sp., Australia), and C. silenes (on Silene maritima, UK). Finally, the phylogenetic position of two genera are newly confirmed, namely Camarosporula (based on C. persooniae, teleomorph Anthracostroma persooniae), which is a leaf pathogen of Persoonia spp. in Australia, belongs to the Teratosphaeriaceae, and Sphaerulina (based on S. myriadea), which occurs on leaves of Fagaceae (Carpinus, Castanopsis, Fagus, Quercus), and belongs to the Mycosphaerel/aceae.
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- 2011
61. The Amsterdam Declaration on Fungal Nomenclature
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D.L. Hawksworth, P.W. Crous, S.A. Redhead, D.R. Reynolds, R.A. Samson, K.A. Seifert, J.W. Taylor, and M.J. Wingfield
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ANAMORPH ,ARTICLE 59 ,BIOCODE ,CANDIDATE SPECIES ,ENVIRONMENTAL SEQUENCES ,INTERNATIONAL CODE OF BOTANICAL NOMENCLATURE ,MYCOCODE ,PLEOMORPHIC FUNGI ,TELEOMORPH ,Botany ,QK1-989 - Abstract
The Amsterdam Declaration on Fungal Nomenclature was agreed at an international symposium convened in Amsterdam on 19-20 April 2011 under the auspices of the International Commission on the Taxonomy of Fungi (ICTF). The purpose of the symposium was to address the issue of whether or how the current system of naming pleomorphic fungi should be maintained or changed now that molecular data are routinely available. The issue is urgent as mycologists currently follow different practices, and no consensus was achieved by a Special Committee appointed in 2005 by the International Botanical Congress to advise on the problem. The Declaration recognizes the need for an orderly transitition to a single-name nomenclatural system for all fungi, and to provide mechanisms to protect names that otherwise then become endangered. That is, meaning that priority should be given to the first described name, except where that is a younger name in general use when the first author to select a name of a pleomorphic monophyletic genus is to be followed, and suggests controversial cases are referred to a body, such as the ICTF, which will report to the Committee for Fungi. If appropriate, the ICTF could be mandated to promote the implementation of the Declaration. In addition, but not forming part of the Declaration, are reports of discussions held during the symposium on the governance of the nomenclature offungi, and the naming of fungi known only from an environmental nucleic acid sequence in particular. Possible amendments to the Draft BioCode (2011) to allow for the needs of mycologists are suggested for further consideration, and a possible example of how a fungus only known from the environment might be described is presented.
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62. Pseudovirgaria, a fungicolous hyphomycete genus
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U. Braun, P.W. Crous, and J.Z. Groenewald
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DOTHIDEOMYCETES ,ITS ,LSU ,PHRAGMIDIUM BULBOSUM ,RUBUS CAESIUS ,RUBUS FRUTICOSUS AGGR ,Botany ,QK1-989 - Abstract
The genus Pseudovirgaria, based on P. hyperparasitica, was recently introduced for a mycoparasite of rust sori of various species of Frommeella, Pucciniastrum and Phragmidium in Korea. In the present study, an older name introduced by Saccardo based on European material, Rhinotrichum griseum, is shown to resemble P. hyperparasitica. Morphological study and ITS barcodes from fresh collections of R. griseum from Austria on uredinia and telia of Phragmidium bulbosum on Rubus spp. reveal that it is distinct from P. hyperparasitica. The status of the genus Rhinotrichum, introduced for a fungus occurring on dry wood, remains unclear. Pseudovirgaria grisea comb. nov. is therefore proposed for the mycoparasite occurring on rust fungi in Europe, and an epitype is designated from the recent collections.
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- 2011
63. Diaporthaceae associated with root and crown rot of maize
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S.C. Lamprecht, P.W. Crous, J.Z. Groenewald, Y.T. Tewoldemedhin, and W.F.O. Marasas
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DIPLODIA ,DIPLODIOSIS ,PHAEOCYTOSTROMA ,PHYLOGENY ,STENOCARPELLA ,SYSTEMATICS ,ZEA MAYS ,Botany ,QK1-989 - Abstract
Several isolates of coelomycetous fungi with pigmented conidia were consistently isolated from diseased roots of Zea mays in irrigated plots monitored in the KwaZulu-Natal Province of South Africa. Based on their morphology, these isolates could be identified as representative of Stenocarpella macrospora, S. maydis, and Phaeocytostroma ambiguum. Although species of Stenocarpella are well-known as causal agents of cob and stalk rot and leaf blight of maize in South Africa, the occurrence and importance of P. ambiguum is less well documented and understood. To determine the role of P. ambiguum as a root pathogen of maize, pathogenicity tests were conducted under glasshouse conditions at 18 °C night and 28 °C day temperatures using a pasteurised soil, river sand and perlite medium and a 0.5 % sand-bran inoculum. Based on these results, P. ambiguum was shown to be a primary pathogen of maize, but to be less virulent than the positive control, S. maydis. Furthermore, to clarify the higher-level phylogeny of these fungal genera, isolates were subjected to DNA sequencing of the nuclear ribosomal DNA (ITS & LSU). Partial gene sequences of the translation elongation factor 1-alpha gene were added to confirm the species monophyly. To resolve the generic placement of Phaeocytostroma, additional species such as P. sacchari, P. plurivorum and P. megalosporum were also added to the analysis. Based on these results, Stenocarpella and Phaeocytostroma were shown to be two well defined genera, belonging to Diaporthales , Diaporthaceae, being closely allied to Phomopsis (Diaporthe). All three genera were also observed to form alpha as well as beta conidia, and although this phenomenon is well documented for Phomopsis and Phaeocytostroma, it is a new observation for Stenocarpella. In spite of the differences in conidial pigmentation, no support could be obtained for polyphyly in Diaporthaceae, suggesting that as observed in Botryosphaeriaceae (Botryosphaeriales), conidial pigmentation is not informative at the family level in Diaporthales.
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- 2011
64. Cercosporoid leaf pathogens from whorled milkweed and spineless safflower in California
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S.T. Koike, A. Baameur, J.Z. Groenewald, and P.W. Crous
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ITS ,PASSALORA ,RAMULARIA ,SYSTEMATICS ,Botany ,QK1-989 - Abstract
Two cercosporoid species are respectively described from Mexican whorled milkweed (Asclepias fascicularis), and spineless safflower (Carthamus tinctorius) from California. Passalora californica represents a new pathogen on Asclepias fascicularis, while Ramularia cynarae is confirmed on Carthamus tinctorius and Cynara cardunculus (Asteraceae), and an epitype designated. Pathogenicity is also established for both pathogens based on Koch's postulate.
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- 2011
65. Fungal phoenix rising from the ashes?
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M.J. Wingfield, M.P.A. Coetzee, P.W. Crous, D. Six, and B.D. Wingfield
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ARMILLARIA MELLEA ,ARMILLARIA ROOT ROT ,FUNGAL INTRODUCTION ,PROTEACEAE ,Botany ,QK1-989 - Abstract
During May 2010, sporocarps of what appeared to be an Armillaria sp. were found in large clumps in historic Kirstenbosch Botanical Gardens on the foot of Table Mountain, Cape Town, South Africa. These sporocarps could be physically linked to the roots of unidentified dead trees and Protea spp. The aim of this study was to identify the Armillaria sp. found fruiting in Kirstenbosch. To achieve this goal isolates were made from the mycelium under the bark of dead roots linked to sporocarps. The ITS and IGS-1 regions were sequenced and compared to sequences of Armillaria spp. available on GenBank. Cladograms were generated using ITS sequences to determine the phylogenetic relationship of the isolates with other Armillaria spp. Sequence comparisons and phylogenetic analyses showed that the isolates represented A. mellea. They were also identical to isolates of this species previously discovered in the Company Gardens in South Africa and introduced from Europe apparently by the early Dutch Settlers. Armillaria mellea is alien and apparently invasive in Cape Town, fruits profusely and has the potential to spread to sensitive native forests on the foothills of the City.
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- 2010
66. What is Johansonia?
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P.W. Crous, R.W. Barreto, A.C. Alfenas, F. Rafael, and J.Z. Groenewald
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DOTHIDEOMYCETES ,JOHANSONIELLA ,ITS ,LSU ,SYSTEMATICS ,Botany ,QK1-989 - Abstract
The bitunicate ascomycete genus Johansonia is presently treated as a member of Saccardiaceae, a family regarded as incertae sedis within the Ascomycota. Recent collections on leaves of a leguminous host, Dimorphandra mollis, in Mato Grosso, Brazil, led to the discovery of a new species of Johansonia, described here as J. chapadiensis. Based on DNA sequence data of the nuclear ribosomal DNA (LSU), Johansonia is revealed to represent a member of Dothideomycetes, Capnodiales. Although its family could not be resolved, it clustered basal to Schizothyriaceae and Mycosphaerellaceae, and could well represent a species of Saccardiaceae. DNA sequence data of other members of Saccardiaceae would be required, however, to confirm this classification.
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- 2010
67. The enigma of Calonectria species occurring on leaves of Ilex aquifolium in Europe
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C. Lechat, P.W. Crous, and J.Z. Groenewald
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HYPOCREALES ,CALONECTRIA ,CYLINDROCLADIUM ,ILEX AQUIFOLIUM ,TUB ,HIS ,SYSTEMATICS ,Botany ,QK1-989 - Abstract
Species of Calonectria are common saprobes and plant pathogens on a wide range of hosts occurring in subtropical to tropical regions of the world. The aim of the present study was to resolve the status of new Calonectria collections obtained on Ilex leaves from France. Based on DNA sequence data of their β-tubulin and histone gene regions, as well as morphology, the new collections matched the ex-type strain of Cylindrocladium ilicicola. On the host and in culture, yellow to brownish-yellow perithecia were observed that did not strain red in 3 % KOH. Based on these results, C. ilicicola and its purported teleomorph, Ca. pyrochroa, were shown to represent two distinct species, as the latter has bright red perithecia that strain purple in KOH. A new combination, Ca. lauri, based on Tetracytum lauri, is subsequently proposed for C. ilicicola. Calonectria lauri is distinct from Ca. ilicicola, a pathogen commonly associated with Cylindrocladium black rot of peanut. Finally, Ca. canadiana is proposed as new name for Cy. canadiense, which is a nursery pathogen involved with root rot of several tree genera in Quebec, Canada.
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- 2010
68. Paraphoma garibaldii sp. nov. causing leaf spot disease of Campanula rapunculoides in Italy
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Guarnaccia, V., primary, Martino, I., additional, Tabone, G., additional, Crous, P.W., additional, and Gullino, M.L., additional
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- 2022
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69. Fungi of quarantine concern for China I:Dothideomycetes
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Zhao, P., primary, Crous, P.W., additional, Hou, L.W., additional, Duan, W.J., additional, Cai, L., additional, Ma, Z.Y., additional, and Liu, F., additional
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70. Species ofBotryosphaeriaceae associated with citrus branch diseases in China
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Xiao, X.E., primary, Wang, W., additional, Crous, P.W., additional, Wang, H.K., additional, Jiao, C., additional, Huang, F., additional, Pu, Z.X., additional, Zhu, Z.R., additional, and Li, H.Y., additional
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- 2021
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71. Fungal Planet description sheets: 1284–1382
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Crous, P.W., primary, Osieck, E.R., additional, Jurjevi, Ž, additional, Boers, J., additional, Van Iperen, A.L., additional, Starink-Willemse, M., additional, Dima, B., additional, Balashov, S., additional, Bulgakov, T.S., additional, Johnston, P.R., additional, Morozova, O.V., additional, Pinruan, U., additional, Sommai, S., additional, Alvarado, P., additional, Decock, C.A., additional, Lebel, T., additional, McMullan-Fisher, S., additional, Moreno, G., additional, Shivas, R.G., additional, Zhao, L., additional, Abdollahzadeh, J., additional, Abrinbana, M., additional, Ageev, D.V., additional, Akhmetova, G., additional, Alexandrova, A.V., additional, Altés, A., additional, Amaral, A.G.G., additional, Angelini, C., additional, Antonín, V., additional, Arenas, F., additional, Asselman, P., additional, Badali, F., additional, Baghela, A., additional, Bañares, A., additional, Barreto, R.W., additional, Baseia, I.G., additional, Bellanger, J.-M., additional, Berraf-Tebbal, A., additional, Biketova, A. Yu., additional, Bukharova, N.V., additional, Burgess, T.I., additional, Cabero, J., additional, Câmara, M.P.S., additional, Cano-Lira, J.F., additional, Ceryngier, P., additional, Chávez, R., additional, Cowan, D.A., additional, de Lima, A.F., additional, Oliveira, R.L., additional, Denman, S., additional, Dang, Q.N., additional, Dovana, F., additional, Duarte, I.G., additional, Eichmeier, A., additional, Erhard, A., additional, Esteve-Raventós, F., additional, Fellin, A., additional, Ferisin, G., additional, Ferreira, R.J., additional, Ferrer, A., additional, Finy, P., additional, Gaya, E., additional, Geering, A.D.W., additional, Gil-Durán, C., additional, Glässnerová, K., additional, Glushakova, A.M., additional, Gramaje, D., additional, Guard, F.E., additional, Guarnizo, A.L., additional, Haelewaters, D., additional, Halling, R.E., additional, Hill, R., additional, Hirooka, Y., additional, Hubka, V., additional, Iliushin, V.A., additional, Ivanova, D.D., additional, Ivanushkina, N.E., additional, Jangsantear, P., additional, Justo, A., additional, Kachalkin, A.V., additional, Kato, S., additional, Khamsuntorn, P., additional, Kirtsideli, I.Y., additional, Knapp, D.G., additional, Kochkina, G.A., additional, Koukol, O., additional, Kovács, G.M., additional, Kruse, J., additional, Kumar, T.K.A., additional, Kušan, I., additional, Læssøe, T., additional, Larsson, E., additional, Lebeuf, R., additional, Levicán, G., additional, Loizides, M., additional, Marinho, P., additional, Luangsa-ard, J.J., additional, Lukina, E.G., additional, Magaña-Dueñas, V., additional, Maggs-Kölling, G., additional, Malysheva, E.F., additional, Malysheva, V.F., additional, Martín, B., additional, Martín, M.P., additional, Matočec, N., additional, McTaggart, A.R., additional, Mehrabi-Koushki, M., additional, Mešić, A., additional, Miller, A.N., additional, Mironova, P., additional, Moreau, P.-A., additional, Morte, A., additional, Müller, K., additional, Nagy, L.G., additional, Nanu, S., additional, Navarro-Ródenas, A., additional, Nel, W.J., additional, Nguyen, T.H., additional, Nóbrega, T.F., additional, Noordeloos, M.E., additional, Olariaga, I., additional, Overton, B.E., additional, Ozerskaya, S.M., additional, Palani, P., additional, Pancorbo, F., additional, Papp, V., additional, Pawłowska, J., additional, Pham, T.Q., additional, Phosri, C., additional, Popov, E.S., additional, Portugal, A., additional, Pošta, A., additional, Reschke, K., additional, Reul, M., additional, Ricci, G.M., additional, Rodríguez, A., additional, Romanowski, J., additional, Ruchikachorn, N., additional, Saar, I., additional, Safi, A., additional, Sakolrak, B., additional, Salzmann, F., additional, Sandoval-Denis, M., additional, Sangwichein, E., additional, Sanhueza, L., additional, Sato, T., additional, Sastoque, A., additional, Senn-Irlet, B., additional, Shibata, A., additional, Siepe, K., additional, Somrithipol, S., additional, Spetik, M., additional, Sridhar, P., additional, Stchigel, A.M., additional, Stuskova, K., additional, Suwannasai, N., additional, Tan, Y.P., additional, Thangavel, R., additional, Tiago, I., additional, Tiwari, S., additional, Tkalčec, Z., additional, Tomashevskaya, M.A., additional, Tonegawa, C., additional, Tran, H.X., additional, Tran, N.T., additional, Trovão, J., additional, Trubitsyn, V.E., additional, Van Wyk, J., additional, Vieira, W.A.S., additional, Vila, J., additional, Visagie, C.M., additional, Vizzini, A., additional, Volobuev, S.V., additional, Vu, D.T., additional, Wangsawat, N., additional, Yaguchi, T., additional, Ercole, E., additional, Ferreira, B.W., additional, de Souza, A.P., additional, Vieira, B.S., additional, and Groenewald, J.Z., additional
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- 2021
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72. Correction to: A core of rhizosphere bacterial taxa associates with two of the world’s most isolated plant congeners
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Angel Valverde, Dominique Strasberg, Casper N. Kamutando, Johannes J. Le Roux, M.J. Wingfield, David M. Richardson, P.W. Crous, Mark G. Wright, Westerdijk Fungal Biodiversity Institute, and Westerdijk Fungal Biodiversity Institute - Evolutionary Phytopathology
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Rhizosphere ,Taxon ,Ecology ,Ecology (disciplines) ,Core (graph theory) ,Soil Science ,Plant physiology ,Plant Science ,Biology - Published
- 2021
73. Inside Plectosphaerellaceae
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A. Giraldo, P.W. Crous, Westerdijk Fungal Biodiversity Institute, and Westerdijk Fungal Biodiversity Institute - Evolutionary Phytopathology
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2. Zero hunger ,0303 health sciences ,Soil fungi ,15. Life on land ,Agricultural and Biological Sciences (miscellaneous) ,030308 mycology & parasitology ,Acremonium ,03 medical and health sciences ,New taxa ,lcsh:Biology (General) ,Plant pathogens ,lcsh:QH301-705.5 ,Phylogeny ,030304 developmental biology ,Taxonomy - Abstract
The family Plectosphaerellaceae (Glomerellales, Sordariomycetes) includes numerous plant pathogenic genera and soil-borne fungal species. Ten genera are currently accepted, including several taxa that occupy an unresolved position within the family. To address this issue, a multilocus sequence analysis was carried out using partial gene sequences from the 28S large subunit nrRNA gene (LSU), the internal transcribed spacer (ITS) regions of the nrDNA region, including the 5.8S nrRNA gene, the translation elongation factor 1-alpha (TEF1-α), tryptophan synthase (TS), actin (ACT) and the RNA polymerase II second largest subunit (RPB2), based on a large set of isolates mainly from the CBS collection. Results of the molecular data combined with a detailed morphological study resolved 22 genera in the family, of which 12 are newly described. Additionally, 15 new species and 10 new combinations are proposed. An epitype and neotype are also introduced for Stachylidium bicolor and Plectosphaerella cucumerina, respectively. Key words: Acremonium, New taxa, Phylogeny, Plant pathogens, Plectosphaerella, Soil fungi, Taxonomy, Taxonomic novelties: new genera: Brunneochlamydosporium Giraldo López & Crous, Chlamydosporiella Giraldo López & Crous, Furcasterigmium Giraldo López & Crous, Fuscohypha Giraldo López & Crous, Musidium Giraldo López & Crous, Nigrocephalum Giraldo López & Crous, Paragibellulopsis Giraldo López & Crous, Paramusicillium Giraldo López & Crous, Phialoparvum Giraldo López & Crous, Summerbellia Giraldo López & Crous, Sayamraella Giraldo López & Crous, Theobromium Giraldo López & Crous, New species: Brunneochlamydosporium macroclavatum Giraldo López & Crous, B. terrestre Giraldo López & Crous, Fuscohypha expansa Giraldo López & Crous, Gibellulopsis aquatica Giraldo López & Crous, G. catenata Giraldo López & Crous, Lectera humicola Giraldo López & Crous, L. phaseoli Giraldo López & Crous, Musicillium tropicale Giraldo López & Crous, M. elettariae Giraldo López & Crous, Paramusicillium asperulatum Giraldo López & Crous, Phialoparvum bifurcatum Giraldo López & Crous, Plectosphaerella humicola Giraldo López & Crous, Summerbellia oligotrophica Giraldo López & Crous, Sayamraella subulata Giraldo López & Crous, Theobromium fuscum Giraldo López & Crous, Sodiomyces alkalinus Grum-Grzhim., Debets & Bilanenko, New combinations: Brunneochlamydosporium cibotii (J.F.H. Beyma) Giraldo López & Crous, B. nepalense (W. Gams) Giraldo López & Crous, Chlamydosporiella restricta (J.F.H. Beyma) Giraldo López & Crous, Furcasterigmium furcatum (W. Gams) Giraldo López & Crous, Gibellulopsis fusca (Thirum. & Sukapure) Giraldo López & Crous, G. serrae (Maffei) Giraldo López & Crous, Musidium stromaticum (W. Gams & R.H. Stover) Giraldo López & Crous, Nigrocephalum collariferum (Weisenb. & R. Kirschner) Giraldo López & Crous, Paragibellulopsis chrysanthemi (Hirooka et al.) Giraldo López & Crous, Sodiomyces alcalophilus (Okada) Giraldo López & Crous, Typification: lectotypification: Stachylidium bicolor Link, Epitypification: Stachylidium bicolor Link, Neotypification: Venturia cucumerina Lindf
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- 2019
74. New and Interesting Fungi. 4
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Crous, P.W., primary, Hernández-Restrepo, M., additional, Schumacher, R.K., additional, Cowan, D.A., additional, Maggs-Kölling, G., additional, Marais, E., additional, Wingfield, M.J., additional, Yilmaz, N., additional, Adan, O.C.G., additional, Akulov, A., additional, Duarte, E. Álvarez, additional, Berraf-Tebbal, A., additional, Bulgakov, T.S., additional, Carnegie, A.J., additional, de Beer, Z.W., additional, Decock, C., additional, Dijksterhuis, J., additional, Duong, T.A., additional, Eichmeier, A., additional, Hien, L.T., additional, Houbraken, J.A.M.P., additional, Khanh, T.N., additional, Liem, N.V., additional, Lombard, L., additional, Lutzoni, F.M., additional, Miadlikowska, J.M., additional, Nel, W.J., additional, Pascoe, I.G., additional, Roets, F., additional, Roux, J., additional, Samson, R.A., additional, Shen, M., additional, Spetik, M., additional, Thangavel, R., additional, Thanh, H.M., additional, Thao, L.D., additional, van Nieuwenhuijzen, E.J., additional, Zhang, J.Q., additional, Zhang, Y., additional, Zhao, L.L., additional, and Groenewald, J.Z., additional
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- 2021
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75. Redefining genera of cereal pathogens: Oculimacula, Rhynchosporium and Spermospora
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Crous, P.W., primary, Braun, U., additional, McDonald, B.A., additional, Lennox, C.L., additional, Edwards, J., additional, Mann, R.C., additional, Zaveri, A., additional, Linde, C.C., additional, Dyer, P.S., additional, and Groenewald, J.Z., additional
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- 2021
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76. Pseudocercospora and allied genera associated with leaf spots of banana (Musa spp.)
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Crous, P.W., primary, Carlier, J., additional, Roussel, V., additional, and Groenewald, J.Z., additional
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- 2021
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77. Fungal Planet description sheets: 1182–1283
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Crous, P.W., Cowan, D.A., Maggs-Kölling, G., Yilmaz, N., Thangavel, R., Wingfield, M.J., Noordeloos, M.E., Dima, B., Brandrud, T.E., Jansen, G.M., Morozova, O.V., Vila, J., Shivas, R.G., Tan, Y.P., Bishop-Hurley, S., Lacey, E., Marney, T.S., Larsson, E., Le Floch, G., Lombard, L., Nodet, P., Hubka, V., Alvarado, P., Berraf-Tebbal, A., Reyes, J.D., Delgado, G., Eichmeier, A., Jordal, J.B., Kachalkin, A.V., Kubátová, A., Maciá-Vicente, J.G., Malysheva, E.F., Papp, V., Rajeshkumar, K.C., Sharma, A., Spetik, M., Szabóová, D., Tomashevskaya, M.A., Abad, J.A., Abad, Z.G., Alexandrova, A.V., Anand, G., Arenas, F., Ashtekar, N., Balashov, S., Bañares, Á., Baroncelli, R., Bera, I., Biketova, A.Yu., Blomquist, C.L., Boekhout, T., Boertmann, D., Bulyonkova, T.M., Burgess, T.I., Carnegie, A.J., Cobo-Diaz, J.F., Corriol, G., Cunnington, J.H., da Cruz, M.O., Damm, U., Davoodian, N., de A. Santiago, A.L.C.M., Dearnaley, J., de Freitas, L.W.S., Dhileepan, K., Dimitrov, R., Di Piazza, S., Fatima, S., Fuljer, F., Galera, H., Ghosh, A., Giraldo, A., Glushakova, A.M., Gorczak, M., Gouliamova, D.E., Gramaje, D., Groenewald, M., Gunsch, C.K., Gutiérrez, A., Holdom, D., Houbraken, J., Ismailov, A.B., Istel, Ł., Iturriaga, T., Jeppson, M., Jurjević, Ž., Kalinina, L.B., Kapitonov, V.I., Kautmanova, I., Khalid, A.N., Kiran, M., Kiss, L., Kovács, Á., Kurose, D., Kusan, I., Lad, S., Læssøe, T., Lee, H.B., Luangsa-ard, J.J., Lynch, M., Mahamedi, A.E., Malysheva, V.F., Mateos, A., Matočec, N., Mešić, A., Miller, A.N., Mongkolsamrit, S., Moreno, G., Morte, A., Mostowfizadeh-Ghalamfarsa, R., Naseer, A., Navarro-Ródenas, A., Nguyen, T.T.T., Noisripoom, W., Ntandu, J.E., Nuytinck, J., Ostrý, V., Pankratov, T.A., Pawłowska, J., Pecenka, J., Pham, T.H.G., Polhorský, A., Posta, A., Raudabaugh, D.B., Reschke, K., Rodríguez, A., Romero, M., Rooney-Latham, S., Roux, J., Sandoval-Denis, M., Smith, M.Th., Steinrucken, T.V., Svetasheva, T.Y., Tkalčec, Z., van der Linde, E.J., v.d. Vegte, M., Vauras, J., Verbeken, A., Visagie, C.M., Vitelli, J.S., Volobuev, S.V., Weill, A., Wrzosek, M., Zmitrovich, I.V., Zvyagina, E.A., Groenewald, J.Z., Crous, P.W., Cowan, D.A., Maggs-Kölling, G., Yilmaz, N., Thangavel, R., Wingfield, M.J., Noordeloos, M.E., Dima, B., Brandrud, T.E., Jansen, G.M., Morozova, O.V., Vila, J., Shivas, R.G., Tan, Y.P., Bishop-Hurley, S., Lacey, E., Marney, T.S., Larsson, E., Le Floch, G., Lombard, L., Nodet, P., Hubka, V., Alvarado, P., Berraf-Tebbal, A., Reyes, J.D., Delgado, G., Eichmeier, A., Jordal, J.B., Kachalkin, A.V., Kubátová, A., Maciá-Vicente, J.G., Malysheva, E.F., Papp, V., Rajeshkumar, K.C., Sharma, A., Spetik, M., Szabóová, D., Tomashevskaya, M.A., Abad, J.A., Abad, Z.G., Alexandrova, A.V., Anand, G., Arenas, F., Ashtekar, N., Balashov, S., Bañares, Á., Baroncelli, R., Bera, I., Biketova, A.Yu., Blomquist, C.L., Boekhout, T., Boertmann, D., Bulyonkova, T.M., Burgess, T.I., Carnegie, A.J., Cobo-Diaz, J.F., Corriol, G., Cunnington, J.H., da Cruz, M.O., Damm, U., Davoodian, N., de A. Santiago, A.L.C.M., Dearnaley, J., de Freitas, L.W.S., Dhileepan, K., Dimitrov, R., Di Piazza, S., Fatima, S., Fuljer, F., Galera, H., Ghosh, A., Giraldo, A., Glushakova, A.M., Gorczak, M., Gouliamova, D.E., Gramaje, D., Groenewald, M., Gunsch, C.K., Gutiérrez, A., Holdom, D., Houbraken, J., Ismailov, A.B., Istel, Ł., Iturriaga, T., Jeppson, M., Jurjević, Ž., Kalinina, L.B., Kapitonov, V.I., Kautmanova, I., Khalid, A.N., Kiran, M., Kiss, L., Kovács, Á., Kurose, D., Kusan, I., Lad, S., Læssøe, T., Lee, H.B., Luangsa-ard, J.J., Lynch, M., Mahamedi, A.E., Malysheva, V.F., Mateos, A., Matočec, N., Mešić, A., Miller, A.N., Mongkolsamrit, S., Moreno, G., Morte, A., Mostowfizadeh-Ghalamfarsa, R., Naseer, A., Navarro-Ródenas, A., Nguyen, T.T.T., Noisripoom, W., Ntandu, J.E., Nuytinck, J., Ostrý, V., Pankratov, T.A., Pawłowska, J., Pecenka, J., Pham, T.H.G., Polhorský, A., Posta, A., Raudabaugh, D.B., Reschke, K., Rodríguez, A., Romero, M., Rooney-Latham, S., Roux, J., Sandoval-Denis, M., Smith, M.Th., Steinrucken, T.V., Svetasheva, T.Y., Tkalčec, Z., van der Linde, E.J., v.d. Vegte, M., Vauras, J., Verbeken, A., Visagie, C.M., Vitelli, J.S., Volobuev, S.V., Weill, A., Wrzosek, M., Zmitrovich, I.V., Zvyagina, E.A., and Groenewald, J.Z.
- Abstract
Novel species of fungi described in this study include those from various countries as follows: Algeria, Phaeoacremonium adelophialidum from Vitis vinifera. Antarctica, Comoclathris antarctica from soil. Australia, Coniochaeta salicifolia as endophyte from healthy leaves of Geijera salicifolia, Eremothecium peggii in fruit of Citrus australis, Microdochium ratticaudae from stem of Sporobolus natalensis, Neocelosporium corymbiae on stems of Corymbia variegata, Phytophthora kelmanii from rhizosphere soil of Ptilotus pyramidatus, Pseudosydowia backhousiae on living leaves of Backhousia citriodora, Pseudosydowia indoor oopillyensis, Pseudosydowia louisecottisiae and Pseudosydowia queenslandica on living leaves of Eucalyptus sp. Brazil, Absidia montepascoalis from soil. Chile, Ilyonectria zarorii from soil under Maytenus boaria. Costa Rica, Colletotrichum filicis from an unidentified fern. Croatia, Mollisia endogranulata on deteriorated hardwood. Czech Republic, Arcopilus navicularis from tea bag with fruit tea, Neosetophoma buxi as endophyte from Buxus sempervirens, Xerochrysium bohemicum on surface of biscuits with chocolate glaze and filled with jam. France, Entoloma cyaneobasale on basic to calcareous soil, Fusarium aconidiale from Triticum aestivum, Fusarium juglandicola from buds of Juglans regia. Germany, Tetraploa endophytica as endophyte from Microthlaspi perfoliatum roots. India, Castanediella ambae on leaves of Mangifera indica, Lactifluus kanadii on soil under Castanopsis sp., Penicillium uttarakhandense from soil. Italy, Penicillium ferraniaense from compost. Namibia, Bezerromyces gobabebensis on leaves of unidentified succulent, Cladosporium stipagrostidicola on leaves of Stipagrostis sp., Cymostachys euphorbiae on leaves of Euphorbia sp., Deniquelata hypolithi from hypolith under a rock, Hysterobrevium walvisbayicola on leaves of unidentified tree, Knufia hypolithi and Knufia walvisbayicola from hypolith under a rock, Lapidomyces stipagrostidicola on leave
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- 2021
78. Species of Botryosphaeriaceae associated with citrus branch diseases in China
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Xiao, X.E., Wang, W., Crous, P.W., Wang, H.K., Jiao, C., Huang, F., Pu, Z.X., Zhu, Z.R., Li, H.Y., Xiao, X.E., Wang, W., Crous, P.W., Wang, H.K., Jiao, C., Huang, F., Pu, Z.X., Zhu, Z.R., and Li, H.Y.
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- 2021
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79. Names of Phytopathogenic Fungi: A Practical Guide
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Crous, P.W., Rossman, A.Y., Aime, M.C., Allen, W.C., Burgess, T., Groenewald, J.Z., Castlebury, L.A., Crous, P.W., Rossman, A.Y., Aime, M.C., Allen, W.C., Burgess, T., Groenewald, J.Z., and Castlebury, L.A.
- Abstract
Using the correct name for phytopathogenic fungi and oomycetes is essential for communicating knowledge about species and their biology, control, and quarantine as well as for trade and research purposes. However, many plant pathogenic fungi are pleomorphic, meaning they produce different asexual (anamorph) and sexual (teleomorph) morphs in their life cycles. Therefore, more than one name has been applied to different morphs of the same species, which has confused users. The onset of DNA technologies makes it possible to connect different morphs of the same species, resulting in a move to a more natural classification system for fungi in which a single name for a genus and species can now be used. This move to a single nomenclature, coupled with the advent of molecular systematics and the introduction of polythetic taxonomic approaches, has been the main driving force for a reclassification of fungi, including pathogens. Nonetheless, finding the correct name for species remains challenging. In this article we outline a series of steps or considerations to greatly simplify this process and provide links to various online databases and resources to aid in determining the correct name. Additionally, a list of accurate names is provided for the most common genera and species of phytopathogenic fungi.
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- 2021
80. Fungal Planet description sheets: 1182–1283
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Crous, P.W. (Pedro Willem), Cowan, D.A., Maggs-Kölling, G., Yilmaz, N., Thangavel, R., Wingfield, M.J., Noordeloos, M.E., Dima, B., Brandrud, (Tor Erik), Jansen, G.M., Morozova, O.V., Vila, J., Shivas, R.G., Tan, Y.P., Bishop-Hurley, S., Lacey, E., Marney, T.S., Larsson, E., Le Floch, G., Lombard, L., Nodet, P., Hubka, V., Alvarado, P., Berraf-Tebbal, A., Reyes, J.D., Delgado, G., Eichmeier, A., Jordal, J.B., Kachalkin, A.V., Kubátová, A., Maciá-Vicente, J.G., Malysheva, E.F., Papp, V., Rajeshkumar, K.C., Sharma, A., Spetik, M., Szabóová, D., Tomashevskaya, M.A., Abad, J.A., Gloria Abad, Z., Alexandrova, A.V., Anand, G., Arenas, F., Ashtekar, N., Balashov, S., Banares, Á., Baroncelli, R., Bera, I., Biketova, A.Yu., Blomquist, C.L., Boekhout, T., Boertmann, D., Bulyonkova, T.M., Burgess, T.I., Carnegie, A.J., Cobo-Diaz, J.F., Corriol, G., Cunnington, J.H., da Cruz, M.O., Damm, U., Davoodian, N., de A. Santiago, A.L.C.M., Dearnaley, J., de Freitas, L.W.S., Dhileepan, K., Dimitrov, R., Di Piazza, S., Fatima, S., Fuljer, F., Galera, H., Ghosh, A., Giraldo, A., Glushakova, A.M., Gorczak, M., Gouliamova, D.E., Gramaje, D., Groenewald, M., Gunsch, C.K., Gutiérrez, A., Holdom, D., Houbraken, J., Ismailov, A.B., Istel, Ł., Iturriaga, T., Jeppson, M., Jurjević, Ž., Kalinina, L.B., Kapitonov, V.I., Kautmanova, I., Khalid, A.N., Kiran, M., Kiss, L., Kovács, Á., Kurose, D., Kusan, I., Lad, S., Læssøe, T., Lee, H.B., Luangsa-ard, J.J., Lynch, M., Mahamedi, A.E., Malysheva, V.F., Mateos, A., Matočec, N., Mešić, A., Miller, A.N., Mongkolsamrit, S., Moreno, G., Morte, A., Mostowfizadeh-Ghalamfarsa, R., Naseer, A., Navarro-Ródenas, A., Nguyen, T.T.T., Noisripoom, W., Ntandu, J.E., Nuytinck, J., Ostrý, V., Pankratov, T.A., Pawłowska, J., Pecenka, J., Pham, T.H.G., Polhorský, A., Posta, A., Raudabaugh, D.B., Reschke, K., Rodríguez, A., Romero, M., Rooney-Latham, S., Roux, J., Sandoval-Denis, M., Smith, M.Th., Steinrucken, T.V., Svetasheva, T.Y., Tkalčec, Z., van der Linde, E.J., v.d. Vegte, M., Vauras, J., Verbeken, A., Visagie, C.M., Vitelli, J.S., Volobuev, S.V., Weill, A., Wrzosek, M., Zmitrovich, I.V., Zvyagina, E.A., Groenewald, J.Z., Crous, P.W. (Pedro Willem), Cowan, D.A., Maggs-Kölling, G., Yilmaz, N., Thangavel, R., Wingfield, M.J., Noordeloos, M.E., Dima, B., Brandrud, (Tor Erik), Jansen, G.M., Morozova, O.V., Vila, J., Shivas, R.G., Tan, Y.P., Bishop-Hurley, S., Lacey, E., Marney, T.S., Larsson, E., Le Floch, G., Lombard, L., Nodet, P., Hubka, V., Alvarado, P., Berraf-Tebbal, A., Reyes, J.D., Delgado, G., Eichmeier, A., Jordal, J.B., Kachalkin, A.V., Kubátová, A., Maciá-Vicente, J.G., Malysheva, E.F., Papp, V., Rajeshkumar, K.C., Sharma, A., Spetik, M., Szabóová, D., Tomashevskaya, M.A., Abad, J.A., Gloria Abad, Z., Alexandrova, A.V., Anand, G., Arenas, F., Ashtekar, N., Balashov, S., Banares, Á., Baroncelli, R., Bera, I., Biketova, A.Yu., Blomquist, C.L., Boekhout, T., Boertmann, D., Bulyonkova, T.M., Burgess, T.I., Carnegie, A.J., Cobo-Diaz, J.F., Corriol, G., Cunnington, J.H., da Cruz, M.O., Damm, U., Davoodian, N., de A. Santiago, A.L.C.M., Dearnaley, J., de Freitas, L.W.S., Dhileepan, K., Dimitrov, R., Di Piazza, S., Fatima, S., Fuljer, F., Galera, H., Ghosh, A., Giraldo, A., Glushakova, A.M., Gorczak, M., Gouliamova, D.E., Gramaje, D., Groenewald, M., Gunsch, C.K., Gutiérrez, A., Holdom, D., Houbraken, J., Ismailov, A.B., Istel, Ł., Iturriaga, T., Jeppson, M., Jurjević, Ž., Kalinina, L.B., Kapitonov, V.I., Kautmanova, I., Khalid, A.N., Kiran, M., Kiss, L., Kovács, Á., Kurose, D., Kusan, I., Lad, S., Læssøe, T., Lee, H.B., Luangsa-ard, J.J., Lynch, M., Mahamedi, A.E., Malysheva, V.F., Mateos, A., Matočec, N., Mešić, A., Miller, A.N., Mongkolsamrit, S., Moreno, G., Morte, A., Mostowfizadeh-Ghalamfarsa, R., Naseer, A., Navarro-Ródenas, A., Nguyen, T.T.T., Noisripoom, W., Ntandu, J.E., Nuytinck, J., Ostrý, V., Pankratov, T.A., Pawłowska, J., Pecenka, J., Pham, T.H.G., Polhorský, A., Posta, A., Raudabaugh, D.B., Reschke, K., Rodríguez, A., Romero, M., Rooney-Latham, S., Roux, J., Sandoval-Denis, M., Smith, M.Th., Steinrucken, T.V., Svetasheva, T.Y., Tkalčec, Z., van der Linde, E.J., v.d. Vegte, M., Vauras, J., Verbeken, A., Visagie, C.M., Vitelli, J.S., Volobuev, S.V., Weill, A., Wrzosek, M., Zmitrovich, I.V., Zvyagina, E.A., and Groenewald, J.Z.
- Abstract
Novel species of fungi described in this study include those from various countries as follows: Algeria, Phaeoacremonium adelophialidum from Vitis vinifera. Antarctica, Comoclathris antarctica from soil. Australia, Coniochaeta salicifolia as endophyte from healthy leaves of Geijera salicifolia, Eremothecium peggii in fruit of Citrus australis, Microdochium ratticaudae from stem of Sporobolus natalensis, Neocelosporium corymbiae on stems of Corymbia variegata, Phytophthora kelmanii from rhizosphere soil of Ptilotus pyramidatus, Pseudosydowia backhousiae on living leaves of Backhousia citriodora, Pseudosydowia indooroopillyensis, Pseudosydowia louisecottisiae and Pseudosydowia queenslandica on living leaves of Eucalyptus sp. Brazil, Absidia montepascoalis from soil. Chile, Ilyonectria zarorii from soil under Maytenus boaria. Costa Rica, Colletotrichum filicis from an unidentified fern. Croatia, Mollisia endogranulata on deteriorated hardwood. Czech Republic, Arcopilus navicularis from tea bag with fruit tea, Neosetophoma buxi as endophyte from Buxus sempervirens, Xerochrysium bohemicum on surface of biscuits with chocolate glaze and filled with jam. France, Entoloma cyaneobasale on basic to calcareous soil, Fusarium aconidiale from Triticum aestivum, Fusarium juglandicola from buds of Juglans regia. Germany, Tetraploa endophytica as endophyte from Microthlaspi perfoliatum roots. India, Castanediella ambae on leaves of Mangifera indica, Lactifluus kanadii on soil under Castanopsis sp., Penicillium uttarakhandense from soil. Italy, Penicillium ferraniaense from compost. Namibia, Bezerromyces gobabebensis on leaves of unidentified succulent, Cladosporium stipagrostidicola on leaves of Stipagrostis sp., Cymostachys euphorbiae on leaves of Euphorbia sp., Deniquelata hypolithi from hypolith under a rock, Hysterobrevium walvisbayicola on leaves of unidentified tree, Knufia hypolithi and Knufia walvisbayicola from hypolith under a rock, Lapidomyces stipagrostidicola on leaves
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- 2021
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81. Redefining species limits in the Fusarium fujikuroi species complex
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Yilmaz, N., Sandoval-Denis, M., Lombard, L., Visagie, C.M., Wingfield, B.D., Crous, P.W. (Pedro Willem), Yilmaz, N., Sandoval-Denis, M., Lombard, L., Visagie, C.M., Wingfield, B.D., and Crous, P.W. (Pedro Willem)
- Abstract
The Fusarium fujikuroi species complex (FFSC) includes more than 60 phylogenetic species (phylospecies) with both phytopathological and clinical importance. Because of their economical relevance, a stable taxonomy and nomenclature is crucial for species in the FFSC. To attain this goal, we examined type specimens and representative cultures of several species by employing morphology and phylogenetic analyses based on partial gene fragments of the translation elongation factor 1-alpha (tef1), beta-tubulin (tub2), calmodulin (cmdA), RNA polymerase largest subunit (rpb1) and RNA polymerase II second largest subunit (rpb2). Based on these results three new species were delimited in the FFSC. Two of these phylospecies clustered within the African clade, and one in the American clade. Epitypes were also designated for six previously described FFSC species including F. proliferatum and F. verticillioides, and a neotype designated for F. subglutinans. Furthermore, both F. acutatum and F. ophioides, which were previously invalidly published, are validated.
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- 2021
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82. Evaluating species in Botryosphaeriales
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Zhang, W., Groenewald, J.Z., Lombard, L., Schumacher, R.K., Phillips, A.J.L., Crous, P.W. (Pedro Willem), Zhang, W., Groenewald, J.Z., Lombard, L., Schumacher, R.K., Phillips, A.J.L., and Crous, P.W. (Pedro Willem)
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The Botryosphaeriales (Dothideomycetes) includes numerous endophytic, saprobic, and plant pathogenic species associated with a wide range of symptoms, most commonly on woody plants. In a recent phylogenetic treatment of 499 isolates in the culture collection (CBS) of the Westerdijk Institute, we evaluated the families and genera accommodated in this order of important fungi. The present study presents multigene phylogenetic analyses for an additional 230 isolates, using ITS, tef1, tub2, LSU and rpb2 loci, in combination with morphological data. Based on these data, 58 species are reduced to synonymy, and eight novel species are described. They include Diplodia afrocarpi (Afrocarpus, South Africa), Dothiorella diospyricola (Diospyros, South Africa), Lasiodiplodia acaciae (Acacia, Indonesia), Neofusicoccum podocarpi (Podocarpus, South Africa), N. rapaneae (Rapanea, South Africa), Phaeobotryon ulmi (Ulmus, Germany), Saccharata grevilleae (Grevillea, Australia) and S. hakeiphila (Hakea, Australia). The results have clarified the identity of numerous isolates that lacked Latin binomials or had been deposited under incorrect names in the CBS collection in the past. They also provide a solid foundation for more in-depth future studies on taxa in the order. Sequences of the tef1, tub2 and rpb2 genes proved to be the most reliable markers. At the species level, results showed that the most informative genes were inconsistent, but that a combination of four candidate barcodes (ITS, tef1, tub2 and rpb2) provided reliable resolution. Furthermore, given the large number of additional isolates included in this study, and newly generated multigene DNA datasets, several species could also be reduced to synonymy. The study illustrates the value of reassessing the identity of older collections in culture collections utilising modern taxonomic frameworks and methods.
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- 2021
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83. Genome-scale phylogenies reveal relationships among Parastagonospora species infecting domesticated and wild grasses
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Croll, D., Crous, P.W. (Pedro Willem), Pereira, D., Mordecai, E.A., McDonald, B.A., Brunner, P.C., Croll, D., Crous, P.W. (Pedro Willem), Pereira, D., Mordecai, E.A., McDonald, B.A., and Brunner, P.C.
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Several plant pathogenic Parastagonospora species have been identified infecting wheat and other cereals over the past 50 years. As new lineages were discovered, naming conventions grew unwieldy and the relationships with previously recognized species remained unclear. We used genome sequencing to clarify relationships among these species and provided new names for most of these species. Six of the nine described Parastagonospora species were recovered from wheat, with five of these species coming from Iran. Genome sequences revealed that three strains thought to be hybrids between P. nodorum and P. pseudonodorum were not actually hybrids, but rather represented rare gene introgressions between those species. Our data are consistent with the hypothesis that P. nodorum originated as a pathogen of wild grasses in the Fertile Crescent, then emerged as a wheat pathogen via host-tracking during the domestication of wheat in the same region. The discovery of a diverse array of Parastagonospora species infecting wheat in Iran suggests that new wheat pathogens could emerge from this region in the future.
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- 2021
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84. Fungi of quarantine concern for China I: Dothideomycetes
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Zhao, P., Crous, P.W. (Pedro Willem), Hou, L.W., Duan, W.J., Cai, L., Ma, Z.Y., Liu, F., Zhao, P., Crous, P.W. (Pedro Willem), Hou, L.W., Duan, W.J., Cai, L., Ma, Z.Y., and Liu, F.
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The current list of Chinese quarantine pests includes 130 fungal species. However, recent changes in the taxonomy of fungi following the one fungus = one name initiative and the implementation of DNA phylogeny in taxonomic revisions, resulted in many changes of these species names, necessitating an update of the current list. In addition, many quarantine fungi lack modern morphological descriptions and authentic DNA sequences, posing significant challenges for the development of diagnostic protocols. The aim of the present study was to review the taxonomy and names of the 33 Chinese quarantine fungi in Dothideomycetes, and provide reliable DNA barcodes to facilitate rapid identification. Of these, 23 names were updated according to the single name nomenclature system, including one new combination, namely Cophinforma tumefaciens comb. nov. (syn. Sphaeropsis tumefaciens). On the basis of phylogenetic analyses and morphological comparisons, a new genus Xenosphaeropsis is introduced to accommodate the monotypic species Xenosphaeropsis pyriputrescens comb. nov. (syn. Sphaeropsis pyriputrescens), the causal agent of a post-harvest disease of pears. Furthermore, four lectotypes (Ascochyta petroselini, Mycosphaerella ligulicola, Physalospora laricina, Sphaeria lingam), three epitypes (Ascochyta petroselini, Phoma lycopersici, Sphaeria lingam), and two neotypes (Ascochyta pinodella, Deuterophoma tracheiphila) are designated to stabilise the use of these names. A further four reference strains are introduced for Cophinforma tumefaciens, Helminthosporium solani, Mycocentro spora acerina, and Septoria linicola. In addition, to assist future studies on these important pathogens, we sequenced and assembled whole genomes for 17 species, including Alternaria triticina, Boeremia foveata, B. lycopersici, Cladosporium cucumerinum, Didymella glomerata, Didymella pinodella, Diplodia mutila, Helminthosporium solani, Mycocentrospora acerina, Neofusicoccum laricinum, Parastagonospora pseu
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- 2021
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85. Citizen science project reveals novel fusarioid fungi (Nectriaceae, Sordariomycetes) from urban soils
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Crous, P.W., Hernández-Restrepo, M., van Iperen, A.L., Starink-Willemse, M., Sandoval-Denis, M., Groenewald, J.Z., Crous, P.W., Hernández-Restrepo, M., van Iperen, A.L., Starink-Willemse, M., Sandoval-Denis, M., and Groenewald, J.Z.
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Soil fungi play a crucial role in soil quality and fertility in being able to break down organic matter but are frequently also observed to play a role as important plant pathogens. As part of a Citizen Science Project initiated by the Westerdijk Fungal Biodiversity Institute and the Utrecht University Museum, which aimed to describe novel fungal species from Dutch garden soil, the diversity of fusarioid fungi (Fusarium and other fusarioid genera), which are members of Nectriaceae (Hypocreales) was investigated. Preliminary analyses of ITS and LSU sequences from more than 4 750 isolates obtained indicated that 109 strains belong to this generic complex. Based on multi-locus phylogenies of combinations of cmdA, tef1, rpb1, rpb2 and tub2 alignments, and morphological characteristics, 25 species were identified, namely 22 in Fusarium and three in Neocosmospora. Furthermore, two species were described as new namely F. vanleeuwenii from the Fusarium oxysporum species complex (FOSC), and F. wereldwijsianum from the Fusarium incarnatum-equiseti species complex (FIESC). Other species encountered in this study include in the FOSC: F. curvatum, F. nirenbergiae, F. oxysporum and three undescribed Fusarium spp.; in the FIESC: F. clavus, F. croceum, F. equiseti, F. flagelliforme and F. toxicum; Fusarium tricinctum species complex: F. flocciferum and F. torulosum; the Fusarium sambucinum species complex: F. culmorum and F. graminearum; the Fusarium redolens species complex: F. redolens; and the Fusarium fujikuroi species complex: F. verticillioides. Three species of Neocosmospora were encountered, namely N. solani, N. stercicola and N. tonkinensis. Although soil fungal diversity has been well studied in the Netherlands, this study revealed two new species, and eight new records: F. clavus, F. croceum, F. flagelliforme, F. odoratissimum, F. tardicrescens, F. toxicum, F. triseptatum and N. stercicola.
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- 2021
86. Neocosmospora spp. associated with dry root rot of citrus in South Africa
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Guarnaccia, Vladimiro, Van Niekerk, J., Crous, P.W., Sandoval-Denis, Marcelo, Guarnaccia, Vladimiro, Van Niekerk, J., Crous, P.W., and Sandoval-Denis, Marcelo
- Abstract
Citrus is one of the most important fruit crops cultivated in South Africa. Internationally, citrus dry root rot is a common disease in major citrus production areas. Several abiotic and biotic factors are involved in disease development, in which Neocosmospora species are important biotic agents. The diversity of Neocosmospora species associated with dry root rot symptoms of Citrus trees cultivated in South Africa was evaluated using morphological and molecular analyses. Multi-locus analysis was conducted, based on fragments of seven loci including: ATP citrate lyase (acl1), calmodulin (cal), internal transcribed spacer region of the rRNA (ITS), large subunit of the rRNA (LSU), RNA polymerase largest subunit (rpb1), RNA polymerase second largest subunit (rpb2), and translation elongation factor 1-alpha (tef1). A total of 62 strains representing 11 Neocosmospora species were isolated from crowns, trunks and roots of citrus trees affected by dry root rot, as well as from soils sampled in affected citrus orchards. The most commonly isolated taxa were N. citricola, N. ferruginea and N. solani, while rarely encountered taxa included N. brevis, N. crassa, N. hypothenemi and N. noneumartii. Furthermore, four Neocosmospora species are also newly described, namely N. addoensis, N. citricola, N. gamtoosensis and N. lerouxii.
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- 2021
87. Fusarium: more than a node or a foot-shaped basal cell
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Crous, P.W., Lombard, L., Sandoval-Denis, M., Seifert, K.A., Schroers, H.-J., Chaverri, P., Gené, J., Guarro, J., Hirooka, Y., Bensch, K., Kema, G.H.J., Lamprecht, S.C., Cai, L., Rossman, A.Y., Stadler, M., Summerbell, R.C., Taylor, J.W., Ploch, S., Visagie, C.M., Yilmaz, N., Frisvad, J.C., Abdel-Azeem, A.M., Abdollahzadeh, J., Abdolrasouli, A., Akulov, A., Alberts, J.F., Araújo, J.P.M., Ariyawansa, H.A., Bakhshi, M., Bendiksby, M., Amor, A. Ben Hadj, Bezerra, J.D.P., Boekhout, T., Câmara, M.P.S., Carbia, M., Cardinali, G., Castañeda-Ruiz, R.F., Celis, A., Chaturvedi, V., Collemare, J., Croll, D., Damm, U., Decock, C.A., Vries, R.P. de, Ezekiel, C.N., Fan, X.L., Fernández, N.B., Gaya, E., González, C.D., Gramaje, D., Groenewald, J.Z., Grube, M., Guevara-Suarez, M., Gupta, V.K., Guarnaccia, V., Haddaji, A., Hagen, F., Haelewaters, D., Hansen, K., Hashimoto, A., Hernández-Restrepo, M., Houbraken, J., Hubka, V., Hyde, K.D., Iturriaga, T., Jeewon, R., Johnston, P.R., Jurjević, Ž., Karalti, İ., Korsten, L., Kuramae, E.E., Kušan, I., Labuda, R., Lawrence, D.P., Lee, H.B., Lechat, C., Li, H.Y., Litovka, Y.A., Maharachchikumbura, S.S.N., Marin-Felix, Y., Kemkuignou, B. Matio, Matočec, N., McTaggart, A.R., Mlčoch, P., Mugnai, L., Nakashima, C., Nilsson, R.H., Noumeur, S.R., Pavlov, I.N., Peralta, M.P., Phillips, A.J.L., Pitt, J.I., Polizzi, G., Quaedvlieg, W., Rajeshkumar, K.C., Restrepo, S., Rhaiem, A., Robert, J., Robert, V., Rodrigues, A.M., Salgado-Salazar, C., Samson, R.A., Santos, A.C.S., Shivas, R.G., Souza-Motta, C.M., Sun, G.Y., Swart, W.J., Szoke, S., Tan, Y.P., Taylor, J.E., Taylor, P.W.J., Tiago, P.V., Váczy, K.Z., Wiele, N. van de, Merwe, N.A. van der, Verkley, G.J.M., Vieira, W.A.S., Vizzini, A., Weir, B.S., Wijayawardene, N.N., Xia, J.W., Yáñez-Morales, M.J., Yurkov, A., Zamora, J.C., Zare, R., Zhang, C.L., Thines, M., Crous, P.W., Lombard, L., Sandoval-Denis, M., Seifert, K.A., Schroers, H.-J., Chaverri, P., Gené, J., Guarro, J., Hirooka, Y., Bensch, K., Kema, G.H.J., Lamprecht, S.C., Cai, L., Rossman, A.Y., Stadler, M., Summerbell, R.C., Taylor, J.W., Ploch, S., Visagie, C.M., Yilmaz, N., Frisvad, J.C., Abdel-Azeem, A.M., Abdollahzadeh, J., Abdolrasouli, A., Akulov, A., Alberts, J.F., Araújo, J.P.M., Ariyawansa, H.A., Bakhshi, M., Bendiksby, M., Amor, A. Ben Hadj, Bezerra, J.D.P., Boekhout, T., Câmara, M.P.S., Carbia, M., Cardinali, G., Castañeda-Ruiz, R.F., Celis, A., Chaturvedi, V., Collemare, J., Croll, D., Damm, U., Decock, C.A., Vries, R.P. de, Ezekiel, C.N., Fan, X.L., Fernández, N.B., Gaya, E., González, C.D., Gramaje, D., Groenewald, J.Z., Grube, M., Guevara-Suarez, M., Gupta, V.K., Guarnaccia, V., Haddaji, A., Hagen, F., Haelewaters, D., Hansen, K., Hashimoto, A., Hernández-Restrepo, M., Houbraken, J., Hubka, V., Hyde, K.D., Iturriaga, T., Jeewon, R., Johnston, P.R., Jurjević, Ž., Karalti, İ., Korsten, L., Kuramae, E.E., Kušan, I., Labuda, R., Lawrence, D.P., Lee, H.B., Lechat, C., Li, H.Y., Litovka, Y.A., Maharachchikumbura, S.S.N., Marin-Felix, Y., Kemkuignou, B. Matio, Matočec, N., McTaggart, A.R., Mlčoch, P., Mugnai, L., Nakashima, C., Nilsson, R.H., Noumeur, S.R., Pavlov, I.N., Peralta, M.P., Phillips, A.J.L., Pitt, J.I., Polizzi, G., Quaedvlieg, W., Rajeshkumar, K.C., Restrepo, S., Rhaiem, A., Robert, J., Robert, V., Rodrigues, A.M., Salgado-Salazar, C., Samson, R.A., Santos, A.C.S., Shivas, R.G., Souza-Motta, C.M., Sun, G.Y., Swart, W.J., Szoke, S., Tan, Y.P., Taylor, J.E., Taylor, P.W.J., Tiago, P.V., Váczy, K.Z., Wiele, N. van de, Merwe, N.A. van der, Verkley, G.J.M., Vieira, W.A.S., Vizzini, A., Weir, B.S., Wijayawardene, N.N., Xia, J.W., Yáñez-Morales, M.J., Yurkov, A., Zamora, J.C., Zare, R., Zhang, C.L., and Thines, M.
- Abstract
Recent publications have argued that there are potentially serious consequences for researchers in recognising distinct genera in the terminal fusarioid clade of the family Nectriaceae. Thus, an alternate hypothesis, namely a very broad concept of the genus Fusarium was proposed. In doing so, however, a significant body of data that supports distinct genera in Nectriaceae based on morphology, biology, and phylogeny is disregarded. A DNA phylogeny based on 19 orthologous protein-coding genes was presented to support a very broad concept of Fusarium at the F1 node in Nectriaceae. Here, we demonstrate that re-analyses of this dataset show that all 19 genes support the F3 node that represents Fusarium sensu stricto as defined by F. sambucinum (sexual morph synonym Gibberella pulicaris). The backbone of the phylogeny is resolved by the concatenated alignment, but only six of the 19 genes fully support the F1 node, representing the broad circumscription of Fusarium. Furthermore, a re-analysis of the concatenated dataset revealed alternate topologies in different phylogenetic algorithms, highlighting the deep divergence and unresolved placement of various Nectriaceae lineages proposed as members of Fusarium. Species of Fusarium s. str. are characterised by Gibberella sexual morphs, asexual morphs with thin- or thick-walled macroconidia that have variously shaped apical and basal cells, and trichothecene mycotoxin production, which separates them from other fusarioid genera. Here we show that the Wollenweber concept of Fusarium presently accounts for 20 segregate genera with clear-cut synapomorphic traits, and that fusarioid macroconidia represent a character that has been gained or lost multiple times throughout Nectriaceae. Thus, the very broad circumscription of Fusarium is blurry and without apparent synapomorphies, and does not include all genera with fusarium-like macroconidia, which are spread throughout Nectriaceae (e.g., Cosmosporella, Macroconia, Microcera). In th
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- 2021
88. New and Interesting Fungi. 4
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Crous, P.W., Hernández-Restrepo, M., Schumacher, R.K., Cowan, D.A., Maggs-Kölling, G., Marais, E., Wingfield, M.J., Yilmaz, N., Adan, O.C.G., Akulov, A., Álvarez Duarte, E., Berraf-Tebbal, A., Bulgakov, T.S., Carnegie, A.J., de Beer, Z.W., Decock, C., Dijksterhuis, J., Duong, T.A., Eichmeier, A., Hien, L.T., Houbraken, J.A.M.P., Khanh, T.N., Liem, N.V., Lombard, L., Lutzoni, F.M., Miadlikowska, J.M., Nel, W.J., Pascoe, I.G., Roets, F., Roux, J., Samson, R.A., Shen, M., Spetik, M., Thangavel, R., Thanh, H.M., Thao, L.D., van Nieuwenhuijzen, E.J., Zhang, J.Q., Zhang, Y., Zhao, L.L., Groenewald, J.Z., Crous, P.W., Hernández-Restrepo, M., Schumacher, R.K., Cowan, D.A., Maggs-Kölling, G., Marais, E., Wingfield, M.J., Yilmaz, N., Adan, O.C.G., Akulov, A., Álvarez Duarte, E., Berraf-Tebbal, A., Bulgakov, T.S., Carnegie, A.J., de Beer, Z.W., Decock, C., Dijksterhuis, J., Duong, T.A., Eichmeier, A., Hien, L.T., Houbraken, J.A.M.P., Khanh, T.N., Liem, N.V., Lombard, L., Lutzoni, F.M., Miadlikowska, J.M., Nel, W.J., Pascoe, I.G., Roets, F., Roux, J., Samson, R.A., Shen, M., Spetik, M., Thangavel, R., Thanh, H.M., Thao, L.D., van Nieuwenhuijzen, E.J., Zhang, J.Q., Zhang, Y., Zhao, L.L., and Groenewald, J.Z.
- Abstract
An order, family and genus are validated, seven new genera, 35 new species, two new combinations, two epitypes, two lectotypes, and 17 interesting new host and / or geographical records are introduced in this study. Validated order, family and genus: Superstratomycetales and Superstratomycetaceae (based on Superstratomyces). New genera: Haudseptoria (based on Haudseptoria typhae); Hogelandia (based on Hogelandia lambearum); Neoscirrhia (based on Neoscirrhia osmundae); Nothoanungitopsis (based on Nothoanungitopsis urophyllae); Nothomicrosphaeropsis (based on Nothomicrosphaeropsis welwitschiae); Populomyces (based on Populomyces zwinianus); Pseudoacrospermum (based on Pseudoacrospermum goniomae). New species: Apiospora sasae on dead culms of Sasa veitchii (Netherlands); Apiospora stipae on dead culms of Stipa gigantea (Spain); Bagadiella eucalyptorum on leaves of Eucalyptus sp. (Australia); Calonectria singaporensis from submerged leaf litter (Singapore); Castanediella neomalaysiana on leaves of Eucalyptus sp. (Malaysia); Colletotrichum pleopeltidis on leaves of Pleopeltis sp. (South Africa); Coniochaeta deborreae from soil (Netherlands); Diaporthe durionigena on branches of Durio zibethinus (Vietnam); Floricola juncicola on dead culm of Juncus sp. (France); Haudseptoria typhae on leaf sheath of Typha sp. (Germany); Hogelandia lambearum from soil (Netherlands); Lomentospora valparaisensis from soil (Chile); Neofusicoccum mystacidii on dead stems of Mystacidium capense (South Africa); Neomycosphaerella guibourtiae on leaves of Guibourtia sp. (Angola); Niesslia neoexosporioides on dead leaves of Carex paniculata (Germany); Nothoanungitopsis urophyllae on seed capsules of Eucalyptus urophylla (South Africa); Nothomicrosphaeropsis welwitschiae on dead leaves of Welwitschia mirabilis (Namibia); Paracremonium bendijkiorum from soil (Netherlands); Paraphoma ledniceana on dead wood of Buxus sempervirens (Czech Republic); Paraphoma salicis on leaves of Salix cf. alba (Ukraine)
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- 2021
89. Redefining genera of cereal pathogens: Oculimacula, Rhynchosporium and Spermospora
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Crous, P.W., Braun, Uwe, McDonald, B.A., Lennox, C.L., Edwards, Jacqueline, Mann, Ross C., Zaveri, A, Linde, C.C., Dyer, P.S., Groenewald, Ewald, Crous, P.W., Braun, Uwe, McDonald, B.A., Lennox, C.L., Edwards, Jacqueline, Mann, Ross C., Zaveri, A, Linde, C.C., Dyer, P.S., and Groenewald, Ewald
- Abstract
The taxonomy of Oculimacula, Rhynchosporium and Spermospora is re-evaluated, along with that of phylogenetically related genera. Isolates are identified using comparisons of DNA sequences of the internal transcribed spacer ribosomal RNA locus (ITS), partial translation elongation factor 1-alpha (tef1), actin (act), DNA-directed RNA polymerase II largest (rpb1) and second largest subunit (rpb2) genes, and the nuclear ribosomal large subunit (LSU), combined with their morphological characteristics. Oculimacula is restricted to two species, O. acuformis and O. yallundae, with O. aestiva placed in Cyphellophora, and O. anguioides accommodated in a new genus, Helgardiomyces. Rhynchosporium s. str. is restricted to species with 1-septate conidia and hooked apical beaks, while Rhynchobrunnera is introduced for species with 1–3-septate, straight conidia, lacking any apical beak. Rhynchosporium graminicola is proposed to replace the name R. commune applied to the barley scald pathogen based on nomenclatural priority. Spermospora is shown to be paraphyletic, representing Spermospora (type: S. subulata), with three new species, S. arrhenatheri, S. loliiphila and S. zeae, and Neospermospora gen. nov. (type: N. avenae). Ypsilina (type: Y. graminea), is shown to be monophyletic, but appears to be of minor importance on cereals. Finally, Vanderaaea gen. nov. (type: V. ammophilae), is introduced as a new coelomycetous fungus occurring on dead leaves of Ammophila arenaria.
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- 2021
90. Pseudocercospora and allied genera associated with leaf spots of banana (Musa spp.)
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Crous, P.W., Carlier, J., and Roussel, V., Groenewald, J.Z., Crous, P.W., Carlier, J., and Roussel, V., and Groenewald, J.Z.
- Abstract
The Sigatoka leaf spot complex on Musa spp. includes three major pathogens: Pseudocercospora, namely P. musae (Sigatoka leaf spot or yellow Sigatoka), P. eumusae (eumusae leaf spot disease), and P. fijiensis (black leaf streak disease or black Sigatoka). However, more than 30 species of Mycosphaerellaceae have been associated with Sigatoka leaf spots of banana, and previous reports of P. musae and P. eumusae need to be re-evaluated in light of recently described species. The aim of the present study was thus to investigate a global set of 228 isolates of P. musae, P. eumusae and close relatives on banana using multigene DNA sequence data [internal transcribed spacer regions with intervening 5.8S nrRNA gene (ITS), RNA polymerase II second largest subunit gene (rpb2), translation elongation factor 1-alpha gene (tef1), beta-tubulin gene (tub2), and the actin gene (act)] to confirm if these isolates represent P. musae, or a closely allied species. Based on these data one new species is described, namely P. pseudomusae, which is associated with leaf spot symptoms resembling those of P. musae on Musa in Indonesia. Furthermore, P. eumusae, P. musae and P. fijiensis are shown to be well defined taxa, with some isolates also representing P. longispora. Other genera encountered in the dataset are species of Zasmidium (Taiwan leaf speckle), Metulocladosporiella (Cladosporium leaf speckle) and Scolecobasidium leaf speckle..
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- 2021
91. New and Interesting Fungi. 4
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UCL - SST/ELI/ELIM - Applied Microbiology, Crous, P.W., Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands, Schumacher, R.K., Cowan, D.A., Maggs-Kölling, G., Marais, E., Wingfield, M.J., Yilmaz, N., Adan, O.C.G., Akulov, A., Duarte, E. Álvarez, Berraf-Tebbal, A., Bulgakov, T.S., Carnegie, A.J., de Beer, Z.W., Decock, Cony, Dijksterhuis, J., Duong, T.A., Eichmeier, A., Hien, L.T., Houbraken, J.A.M.P., Khanh, T.N., Liem, N.V., Lombard, L., Lutzoni, F.M., Miadlikowska, J.M., Nel, W.J., Pascoe, I.G., Roets, F., Roux, J., Samson, R.A., Shen, M., Spetik, M., Thangavel, R., Thanh, H.M., Thao, L.D., van Nieuwenhuijzen, E.J., Zhang, J.Q., Zhang, Y., Zhao, L.L., Groenewald, J.Z., UCL - SST/ELI/ELIM - Applied Microbiology, Crous, P.W., Westerdijk Fungal Biodiversity Institute, Uppsalalaan 8, 3584 CT Utrecht, The Netherlands, Schumacher, R.K., Cowan, D.A., Maggs-Kölling, G., Marais, E., Wingfield, M.J., Yilmaz, N., Adan, O.C.G., Akulov, A., Duarte, E. Álvarez, Berraf-Tebbal, A., Bulgakov, T.S., Carnegie, A.J., de Beer, Z.W., Decock, Cony, Dijksterhuis, J., Duong, T.A., Eichmeier, A., Hien, L.T., Houbraken, J.A.M.P., Khanh, T.N., Liem, N.V., Lombard, L., Lutzoni, F.M., Miadlikowska, J.M., Nel, W.J., Pascoe, I.G., Roets, F., Roux, J., Samson, R.A., Shen, M., Spetik, M., Thangavel, R., Thanh, H.M., Thao, L.D., van Nieuwenhuijzen, E.J., Zhang, J.Q., Zhang, Y., Zhao, L.L., and Groenewald, J.Z.
- Abstract
An order, family and genus are validated, seven new genera, 35 new species, two new combinations, two epitypes, two lectotypes, and 17 interesting new host and / or geographical records are introduced in this study. Validated order, family and genus: Superstratomycetales and Superstratomycetaceae (based on Superstratomyces). New genera: Haudseptoria (based on Haudseptoria typhae); Hogelandia (based on Hogelandia lambearum); Neoscirrhia (based on Neoscirrhia osmundae); Nothoanungitopsis (based on Nothoanungitopsis urophyllae); Nothomicrosphaeropsis (based on Nothomicrosphaeropsis welwitschiae); Populomyces (based on Populomyces zwinianus); Pseudoacrospermum (based on Pseudoacrospermum goniomae). New species: Apiospora sasae on dead culms of Sasa veitchii (Netherlands); Apiospora stipae on dead culms of Stipa gigantea (Spain); Bagadiella eucalyptorum on leaves of Eucalyptus sp . (Australia); Calonectria singaporensis from submerged leaf litter (Singapore); Castanediella neomalaysiana on leaves of Eucalyptus sp. (Malaysia); Colletotrichum pleopeltidis on leaves of Pleopeltis sp. (South Africa); Coniochaeta deborreae from soil (Netherlands); Diaporthe durionigena on branches of Durio zibethinus (Vietnam); Floricola juncicola on dead culm of Juncus sp. (France); Haudseptoria typhae on leaf sheath of Typha sp. (Germany); Hogelandia lambearum from soil (Netherlands); Lomentospora valparaisensis from soil (Chile); Neofusicoccum mystacidii on dead stems of Mystacidium capense (South Africa); Neomycosphaerella guibourtiae on leaves of Guibourtia sp. (Angola); Niesslia neoexosporioides on dead leaves of Carex paniculata (Germany); Nothoanungitopsis urophyllae on seed capsules of Eucalyptus urophylla (South Africa); Nothomicrosphaeropsis welwitschiae on dead leaves of Welwitschia mirabilis (Namibia); Paracremonium bendijkiorum from soil (Netherlands); Paraphoma ledniceana on dead wood of Buxus sempervirens (Czech Republic); Paraphoma salicis on leaves of Salix cf. alba (Ukraine
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- 2021
92. leotiomyceta RNA polymerase II second largest subunit (RPB2) gene, partial cds
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Quaedvlieg, W., Binder, M., Groenewald, J.Z., Summerell, B.A., Carnegie, A.J., Burgess, T.I., Crous, P.W., Quaedvlieg, W., Binder, M., Groenewald, J.Z., Summerell, B.A., Carnegie, A.J., Burgess, T.I., and Crous, P.W.
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- 2021
93. Fusarium: more than a node or a foot-shaped basal cell
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Crous, P.W., primary, Lombard, L., additional, Sandoval-Denis, M., additional, Seifert, K.A., additional, Schroers, H.-J., additional, Chaverri, P., additional, Gené, J., additional, Guarro, J., additional, Hirooka, Y., additional, Bensch, K., additional, Kema, G.H.J., additional, Lamprecht, S.C., additional, Cai, L., additional, Rossman, A.Y., additional, Stadler, M., additional, Summerbell, R.C., additional, Taylor, J.W., additional, Ploch, S., additional, Visagie, C.M., additional, Yilmaz, N., additional, Frisvad, J.C., additional, Abdel-Azeem, A.M., additional, Abdollahzadeh, J., additional, Abdolrasouli, A., additional, Akulov, A., additional, Alberts, J.F., additional, Araújo, J.P.M., additional, Ariyawansa, H.A., additional, Bakhshi, M., additional, Bendiksby, M., additional, Ben Hadj Amor, A., additional, Bezerra, J.D.P., additional, Boekhout, T., additional, Câmara, M.P.S., additional, Carbia, M., additional, Cardinali, G., additional, Castañeda-Ruiz, R.F., additional, Celis, A., additional, Chaturvedi, V., additional, Collemare, J., additional, Croll, D., additional, Damm, U., additional, Decock, C.A., additional, de Vries, R.P., additional, Ezekiel, C.N., additional, Fan, X.L., additional, Fernández, N.B., additional, Gaya, E., additional, González, C.D., additional, Gramaje, D., additional, Groenewald, J.Z., additional, Grube, M., additional, Guevara-Suarez, M., additional, Gupta, V.K., additional, Guarnaccia, V., additional, Haddaji, A., additional, Hagen, F., additional, Haelewaters, D., additional, Hansen, K., additional, Hashimoto, A., additional, Hernández-Restrepo, M., additional, Houbraken, J., additional, Hubka, V., additional, Hyde, K.D., additional, Iturriaga, T., additional, Jeewon, R., additional, Johnston, P.R., additional, Jurjević, Ž., additional, Karalti, İ., additional, Korsten, L., additional, Kuramae, E.E., additional, Kušan, I., additional, Labuda, R., additional, Lawrence, D.P., additional, Lee, H.B., additional, Lechat, C., additional, Li, H.Y., additional, Litovka, Y.A., additional, Maharachchikumbura, S.S.N., additional, Marin-Felix, Y., additional, Matio Kemkuignou, B., additional, Matočec, N., additional, McTaggart, A.R., additional, Mlčoch, P., additional, Mugnai, L., additional, Nakashima, C., additional, Nilsson, R.H., additional, Noumeur, S.R., additional, Pavlov, I.N., additional, Peralta, M.P., additional, Phillips, A.J.L., additional, Pitt, J.I., additional, Polizzi, G., additional, Quaedvlieg, W., additional, Rajeshkumar, K.C., additional, Restrepo, S., additional, Rhaiem, A., additional, Robert, J., additional, Robert, V., additional, Rodrigues, A.M., additional, Salgado-Salazar, C., additional, Samson, R.A., additional, Santos, A.C.S., additional, Shivas, R.G., additional, Souza-Motta, C.M., additional, Sun, G.Y., additional, Swart, W.J., additional, Szoke, S., additional, Tan, Y.P., additional, Taylor, J.E., additional, Taylor, P.W.J., additional, Tiago, P.V., additional, Váczy, K.Z., additional, van de Wiele, N., additional, van der Merwe, N.A., additional, Verkley, G.J.M., additional, Vieira, W.A.S., additional, Vizzini, A., additional, Weir, B.S., additional, Wijayawardene, N.N., additional, Xia, J.W., additional, Yáñez-Morales, M.J., additional, Yurkov, A., additional, Zamora, J.C., additional, Zare, R., additional, Zhang, C.L., additional, and Thines, M., additional
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- 2021
- Full Text
- View/download PDF
94. ARISE: op zoek naar de onzichtbare biodiversiteit
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Biesmeijer, Koos, van Wezel, Annemarie, Crous, P.W., Kok, Joost, Westerdijk Fungal Biodiversity Institute, and Westerdijk Fungal Biodiversity Institute - Evolutionary Phytopathology
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- 2020
95. Figs S1-S9
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P.W. Crous
- Subjects
Agricultural and Biological Sciences (miscellaneous) ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Microbiology ,Ecology, Evolution, Behavior and Systematics - Abstract
Fig. S1. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the ITS sequence alignment of sequences generated in this study and reference sequences from NCBI GenBank. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072). Fig. S2. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the LSU sequence alignment of sequences generated in this study and reference sequences from NCBI GenBank. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072). Fig. S3. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the act sequence alignment of sequences generated in this study and reference sequences from NCBI GenBank. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072). Fig. S4. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the rpb1 sequence alignment of sequences generated in this study and reference sequences from NCBI GenBank. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072). Fig. S5. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the rpb2 sequence alignment of sequences generated in this study and reference sequences from NCBI GenBank. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072). Fig. S6. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the tef1 sequence alignment of sequences generated in this study and reference sequences from NCBI GenBank. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072). Fig. S7. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the full set 6-gene (ITS, LSU, act, tef1, rpb1, rpb2) sequence alignment. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072).Fig. S8. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the full set 4-gene (ITS, LSU, act, tef1) sequence alignment. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072).Fig. S9. Consensus phylogram (50 % majority rule) resulting from a Bayesian analysis of the full set 2-gene (rpb1, rpb2) sequence alignment. Bayesian posterior probabilities (PP) > 0.85 are shown at the nodes and thickened lines represent nodes with PP = 1.00. The scale bar represents the expected changes per site. Species and culture collection numbers are indicated. The tree was rooted to Ascocoryne sarcoides (culture NRRL 50072).
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- 2020
96. Fungal Planet description sheets: 1042-1111
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Crous, P.W., Wingfield, M.J., Chooi, Y.-H., Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., Valenzuela-Lopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjevi, ., Kachalkin, A.V., Lebel, T., Lock, C., Martın, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, T.E., De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodrıguez, A., Rodrıguez-Andrade, E., Semwal, K.C., Tegart, L., Abad, Z.G., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballara, J., Barrett, M.D., Berna, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chavez, R., mokova, A., Dearnaley, J.D.W., Santiago, A.L.C.M. de A., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventos, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Cañete-Gibas, C.F., Gil-Duran, C., Glushakova, A.M., Gonçalves, M.F.M., Gonzalez, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutierrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inacio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kiso, K., Kiss, L., Kiyashko, A., Kolaık, M., Kruse, J., Kubatova, A., Kuera, V., Kuerova, I., Kuan, I., Lee, H.B., Levican, G., Lewis, A., Liem, N.V., Liimatainen, K., Lim, H.J., Lyons, M.N., Macia-Vicente, J.G., Magaña-Dueñas, V., Mahiques, R., Malysheva, E.F., Marbach, P.A.S., Marinho, P., Matoec, N., McTaggart, A.R., Mei, A., Morin, L., Muñoz-Mohedano, J.M., Navarro-Rodenas, A., Nicolli, C.P., Oliveira, R.L., Otsing, E., Ovrebo, C.L., Pankratov, T.A., Paños, A., Paz-Conde, A., Perez-Sierra, A., Phosri, C., Pintos, A., Pota, A., Prencipe, S., Rubio, E., Saitta, A., Sales, L.S., Sanhueza, L., Shuttleworth, L.A., Smith, J., Smith, M.E., Spadaro, D., Spetik, M., Sochor, M., Sochorova, Z., Sousa, J.O., Suwannasai, N., Tedersoo, L., Thanh, H.M., Thao, L.D., Tkalec, Z., Vaghefi, N., Venzhik, A.S., Verbeken, A., Vizzini, A., Voyron, S., Wainhouse, M., Whalley, A.J.S., Wrzosek, M., Zapata, M., Zeil-Rolfe, I., Groenewald, J.Z., Crous, P.W., Wingfield, M.J., Chooi, Y.-H., Gilchrist, C.L.M., Lacey, E., Pitt, J.I., Roets, F., Swart, W.J., Cano-Lira, J.F., Valenzuela-Lopez, N., Hubka, V., Shivas, R.G., Stchigel, A.M., Holdom, D.G., Jurjevi, ., Kachalkin, A.V., Lebel, T., Lock, C., Martın, M.P., Tan, Y.P., Tomashevskaya, M.A., Vitelli, J.S., Baseia, I.G., Bhatt, V.K., Brandrud, T.E., De Souza, J.T., Dima, B., Lacey, H.J., Lombard, L., Johnston, P.R., Morte, A., Papp, V., Rodrıguez, A., Rodrıguez-Andrade, E., Semwal, K.C., Tegart, L., Abad, Z.G., Akulov, A., Alvarado, P., Alves, A., Andrade, J.P., Arenas, F., Asenjo, C., Ballara, J., Barrett, M.D., Berna, L.M., Berraf-Tebbal, A., Bianchinotti, M.V., Bransgrove, K., Burgess, T.I., Carmo, F.S., Chavez, R., mokova, A., Dearnaley, J.D.W., Santiago, A.L.C.M. de A., Freitas-Neto, J.F., Denman, S., Douglas, B., Dovana, F., Eichmeier, A., Esteve-Raventos, F., Farid, A., Fedosova, A.G., Ferisin, G., Ferreira, R.J., Ferrer, A., Figueiredo, C.N., Figueiredo, Y.F., Reinoso-Fuentealba, C.G., Garrido-Benavent, I., Cañete-Gibas, C.F., Gil-Duran, C., Glushakova, A.M., Gonçalves, M.F.M., Gonzalez, M., Gorczak, M., Gorton, C., Guard, F.E., Guarnizo, A.L., Guarro, J., Gutierrez, M., Hamal, P., Hien, L.T., Hocking, A.D., Houbraken, J., Hunter, G.C., Inacio, C.A., Jourdan, M., Kapitonov, V.I., Kelly, L., Khanh, T.N., Kiso, K., Kiss, L., Kiyashko, A., Kolaık, M., Kruse, J., Kubatova, A., Kuera, V., Kuerova, I., Kuan, I., Lee, H.B., Levican, G., Lewis, A., Liem, N.V., Liimatainen, K., Lim, H.J., Lyons, M.N., Macia-Vicente, J.G., Magaña-Dueñas, V., Mahiques, R., Malysheva, E.F., Marbach, P.A.S., Marinho, P., Matoec, N., McTaggart, A.R., Mei, A., Morin, L., Muñoz-Mohedano, J.M., Navarro-Rodenas, A., Nicolli, C.P., Oliveira, R.L., Otsing, E., Ovrebo, C.L., Pankratov, T.A., Paños, A., Paz-Conde, A., Perez-Sierra, A., Phosri, C., Pintos, A., Pota, A., Prencipe, S., Rubio, E., Saitta, A., Sales, L.S., Sanhueza, L., Shuttleworth, L.A., Smith, J., Smith, M.E., Spadaro, D., Spetik, M., Sochor, M., Sochorova, Z., Sousa, J.O., Suwannasai, N., Tedersoo, L., Thanh, H.M., Thao, L.D., Tkalec, Z., Vaghefi, N., Venzhik, A.S., Verbeken, A., Vizzini, A., Voyron, S., Wainhouse, M., Whalley, A.J.S., Wrzosek, M., Zapata, M., Zeil-Rolfe, I., and Groenewald, J.Z.
- Abstract
Novel species of fungi described in this study include those from various countries as follows: Antarctica, Cladosporium arenosum from marine sediment sand. Argentina, Kosmimatamyces alatophylus (incl. Kosmimatamyces gen. nov.) from soil. Australia, Aspergillus banksianus, Aspergillus kumbius, Aspergillus luteorubrus, Aspergillus malvicolor and Aspergillus nanangensis from soil, Erysiphe medicaginis from leaves of Medicago polymorpha, Hymenotorrendiella communis on leaf litter of Eucalyptus bicostata, Lactifluus albopicri and Lactifluus austropiperatus on soil, Macalpinomyces collinsiae on Eriachne benthamii, Marasmius vagus on soil, Microdochium dawsoniorum from leaves of Sporobolus natalensis, Neopestalotiopsis nebuloides from leaves of Sporobolus elongatus, Pestalotiopsis etonensis from leaves of Sporobolus jacquemontii, Phytophthora personensis from soil associated with dying Grevillea mccutcheonii. Brazil, Aspergillus oxumiae from soil, Calvatia baixaverdensis on soil, Geastrum calycicoriaceum on leaf litter, Greeneria kielmeyerae on leaf spots of Kielmeyera coriacea. Chile, Phytophthora aysenensis on collar rot and stem of Aristotelia chilensis. Croatia, Mollisia gibbospora on fallen branch of Fagus sylvatica. Czech Republic, Neosetophoma hnaniceana from Buxus sempervirens. Ecuador, Exophiala frigidotolerans from soil. Estonia, Elaphomyces bucholtzii in soil. France, Venturia paralias from leaves of Euphorbia paralias. India, Cortinarius balteatoindicus and Cortinarius ulkhagarhiensis on leaf litter. Indonesia, Hymenotorrendiella indonesiana on Eucalyptus urophylla leaf litter. Italy, Penicillium taurinense from indoor chestnut mill. Malaysia, Hemileucoglossum kelabitense on soil, Satchmopsis pini on dead needles of Pinus tecunumanii. Poland, Lecanicillium praecognitum on insects' frass. Portugal, Neodevriesia aestuarina from saline water. Republic of Korea, Gongronella namwonensis from freshwater. Russia, Candida pellucida from Exomias pellucidus, Heterocepha
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- 2020
97. Cytospora (Diaporthales) in China
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Fan, X.L., Bezerra, J.D.P., Tian, C.M., Crous, P.W., Fan, X.L., Bezerra, J.D.P., Tian, C.M., and Crous, P.W.
- Abstract
Members of the genus Cytospora are often reported as endophytes, saprobes or phytopathogens, primarily causing canker diseases of woody host plants. They occur on a wide range of hosts and have a worldwide distribution. Although several species have in the past been reported from China, the vast majority are not known from culture or DNA phylogeny. The primary aim of the present study was thus to clarify the taxonomy and phylogeny of a large collection of Cytospora species associated with diverse hosts in China. Cytospora spp. were collected in northeast, northwest, north and southwest China, indicating that the cold and dry environments favour these fungi. In this paper, we provide an assessment of 52 Cytospora spp. in China, focussing on 40 species represented by 88 isolates from 28 host genera. Based on a combination of morphology and a six-locus phylogeny (ITS, LSU, act1, rpb2, tef1-α and tub2), 13
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- 2020
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98. New and Interesting Fungi. 3
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Crous, P.W., Wingfield, M.J., Schumacher, R.K., Akulov, A., Bulgakov, T.S., Carnegie, A.J., Jurjević, Ž., Decock, C., Denman, S., Lombard, L., Lawrence, D.P., Stack, A.J., Gordon, T.R., Bostock, R.M., Burgess, T., Summerell, B.A., Taylor, P.W.J., Edwards, J., Hou, L.W., Cai, L., Rossman, A.Y., Wöhner, T., Allen, W.C., Castlebury, L.A., Visagie, C.M., Groenewald, J.Z., Crous, P.W., Wingfield, M.J., Schumacher, R.K., Akulov, A., Bulgakov, T.S., Carnegie, A.J., Jurjević, Ž., Decock, C., Denman, S., Lombard, L., Lawrence, D.P., Stack, A.J., Gordon, T.R., Bostock, R.M., Burgess, T., Summerell, B.A., Taylor, P.W.J., Edwards, J., Hou, L.W., Cai, L., Rossman, A.Y., Wöhner, T., Allen, W.C., Castlebury, L.A., Visagie, C.M., and Groenewald, J.Z.
- Abstract
Seven new genera, 26 new species, 10 new combinations, two epitypes, one new name, and 20 interesting new host and / or geographical records are introduced in this study. New genera are: Italiofungus (based on Italiofungus phillyreae) on leaves of Phillyrea latifolia (Italy); Neolamproconium (based on Neolamproconium silvestre) on branch of Tilia sp. (Ukraine); Neosorocybe (based on Neosorocybe pini) on trunk of Pinus sylvestris (Ukraine); Nothoseptoria (based on Nothoseptoria caraganae) on leaves of Caragana arborescens (Russia); Pruniphilomyces (based on Pruniphilomyces circumscissus) on Prunus cerasus (Russia); Vesiculozygosporium (based on Vesiculozygosporium echinosporum) on leaves of Muntingia calabura (Malaysia); Longiseptatispora (based on Longiseptatispora curvata) on leaves of Lonicera tatarica (Russia). New species are: Barrmaelia serenoae on leaf of Serenoa repens (USA); Chaetopsina gautengina on leaves of unidentified grass (South Africa); Chloridium pini on fallen trunk of Pinus sylvestris (Ukraine); Cadophora fallopiae on stems of Reynoutria sachalinensis (Poland); Coleophoma eucalyptigena on leaf litter of Eucalyptus sp. (Spain); Cylindrium corymbiae on leaves of Corymbia maculata (Australia); Diaporthe tarchonanthi on leaves of Tarchonanthus littoralis (South Africa); Elsinoe eucalyptorum on leaves of Eucalyptus propinqua (Australia); Exophiala quercina on dead wood of Quercus sp., (Germany); Fusarium californicum on cambium of budwood of Prunus dulcis (USA); Hypomyces gamsii on wood of Alnus glutinosa (Ukraine); Kalmusia araucariae on leaves of Araucaria bidwillii (USA); Lectera sambuci on leaves of Sambucus nigra (Russia); Melanomma populicola on fallen twig of Populus canadensis (Netherlands), Neocladosporium syringae on branches of Syringa vulgarishorus (Ukraine); Paraconiothyrium iridis on leaves of Iris pseudacorus (Ukraine); Pararoussoella quercina on branch of Quercus robur (Ukraine); Phialemonium pulveris from bore dust of deathwatch beetle
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- 2020
99. Evolution of lifestyles in Capnodiales
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Abdollahzadeh, J., Groenewald, J.Z., Coetzee, M.P.A., Wingfield, M.J., Crous, P.W., Abdollahzadeh, J., Groenewald, J.Z., Coetzee, M.P.A., Wingfield, M.J., and Crous, P.W.
- Abstract
The Capnodiales, which includes fungi known as the sooty moulds, represents the second largest order in Dothideomycetes, encompassing morphologically and ecologically diverse fungi with different lifestyles and modes of nutrition. They include saprobes, plant and human pathogens, mycoparasites, rock-inhabiting fungi (RIF), lichenised, epi-, ecto- and endophytes. The aim of this study was to elucidate the lifestyles and evolutionary patterns of the Capnodiales as well as to reconsider their phylogeny by including numerous new collections of sooty moulds, and using four nuclear loci, LSU, ITS, TEF-1α and RPB2. Based on the phylogenetic results, combined with morphology and ecology, Capnodiales s. lat. is shown to be polyphyletic, representing seven different orders. The sooty moulds are restricted to Capnodiales s. str., while Mycosphaerellales is resurrected, and five new orders including Cladosporiales, Comminutisporales, Neophaeothecales, Phaeothecales and Racodiales are introduced. Four families, three genera, 21 species and five combinations are introduced as new. Furthermore, ancestral reconstruction analysis revealed that the saprobic lifestyle is a primitive state in Capnodiales s. lat., and that several transitions have occurred to evolve lichenised, plant and human parasitic, ectophytic (sooty blotch and flyspeck) and more recently epiphytic (sooty mould) lifestyles.
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- 2020
100. Gymnosporangium species on Malus: species delineation, diversity and host alternation
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Zhao, P., Qi, X.H., Crous, P.W. (Pedro Willem), Duan, W.J., Cai, L., Zhao, P., Qi, X.H., Crous, P.W. (Pedro Willem), Duan, W.J., and Cai, L.
- Abstract
Gymnosporangium species (Pucciniaceae, Pucciniales, Basidiomycota) are the causal agents of cedarapple rust diseases, which can lead to significant economic losses to apple cultivars. Currently, the genus contains 17 described species that alternate between spermogonial/aecial stages on Malus species and telial stages on Juniperus or Chamaecyparis species, although these have yet to receive a modern systematic treatment. Furthermore, prior studies have shown that Gymnosporangium does not belong to the Pucciniaceae sensu stricto (s.str.), nor is it allied to any currently defined rust family. In this study we examine the phylogenetic placement of the genus Gymnosporangium. We also delineate interspecific boundaries of the Gymnosporangium species on Malus based on phylogenies inferred from concatenated data of rDNA SSU, ITS and LSU and the holomorphic morphology of the entire life cycle. Based on these results, we propose a new family, Gymnosporangiaceae, to accommodate the genus Gymnosporangium, and recognize 22 Gymnosporangium species parasitic on Malus species, of which G. lachrymiforme, G. shennongjiaense, G. spinulosum, G. tiankengense and G. kanas are new. Typification of G. asiaticum, G. fenzelianum, G. juniperi-virginianae, G. libocedri, G. nelsonii, G. nidus-avis and G. yamadae are proposed to stabilize the use of names. Morphological and molecular data from type materials of 14 Gymnosporangium species are provided. Finally, morphological characteristics, host alternation and geographical distribution data are provided for each Gymnosporangium species on Malus.
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- 2020
- Full Text
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