4,926 results on '"Bousquet, P."'
Search Results
52. Sit-to-stand performance in children with cerebral palsy: a population-based cross-sectional study
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Romin, Elinor, Lindgren, Anna, Rodby-Bousquet, Elisabet, and Cloodt, Erika
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- 2024
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53. A Fab of trastuzumab to treat HER2 overexpressing breast cancer brain metastases
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Angeli, Eurydice, Paris, Justine, Le Tilly, Olivier, Desvignes, Céline, Gapihan, Guillaume, Boquet, Didier, Pamoukdjian, Frédéric, Hamdan, Diaddin, Rigal, Marthe, Poirier, Florence, Lutomski, Didier, Azibani, Feriel, Mebazaa, Alexandre, Herbet, Amaury, Mabondzo, Aloïse, Falgarone, Géraldine, Janin, Anne, Paintaud, Gilles, and Bousquet, Guilhem
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- 2024
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54. Concomitant medication, comorbidity and survival in patients with breast cancer
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Dumas, Elise, Grandal Rejo, Beatriz, Gougis, Paul, Houzard, Sophie, Abécassis, Judith, Jochum, Floriane, Marande, Benjamin, Ballesta, Annabelle, Del Nery, Elaine, Dubois, Thierry, Alsafadi, Samar, Asselain, Bernard, Latouche, Aurélien, Espie, Marc, Laas, Enora, Coussy, Florence, Bouchez, Clémentine, Pierga, Jean-Yves, Le Bihan-Benjamin, Christine, Bousquet, Philippe-Jean, Hotton, Judicaël, Azencott, Chloé-Agathe, Reyal, Fabien, and Hamy, Anne-Sophie
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- 2024
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55. Differential prognostic values of the three AKT isoforms in acute myeloid leukemia
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Corre, Eulalie, Soum, Cécile, Pfeifer, Romain, Bessière, Chloé, Dailhau, Sandra, Marbœuf, Catherine, Meggetto, Fabienne, Touriol, Christian, Récher, Christian, Bousquet, Marina, and Pyronnet, Stéphane
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- 2024
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56. Incidence and sequence of scoliosis and windswept hip deformity: which comes first in 4148 children with cerebral palsy? A longitudinal cohort study
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Casey, Jackie, Rosenblad, Andreas, Agustsson, Atli, Lauge-Pedersen, Henrik, and Rodby-Bousquet, Elisabet
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- 2024
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57. Identifying biologically implausible values in big longitudinal data: an example applied to child growth data from the Brazilian food and nutrition surveillance system
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de Mello e Silva, Juliana Freitas, de Jesus Silva, Natanael, Carrilho, Thaís Rangel Bousquet, Jesus Pinto, Elizabete de, Rocha, Aline Santos, Pedroso, Jéssica, Silva, Sara Araújo, Spaniol, Ana Maria, da Costa Santin de Andrade, Rafaella, Bortolini, Gisele Ane, Paixão, Enny, Kac, Gilberto, de Cássia Ribeiro-Silva, Rita, and Barreto, Maurício L.
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- 2024
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58. Long-insert sequence capture detects high copy numbers in a defence-related beta-glucosidase gene βglu-1 with large variations in white spruce but not Norway spruce
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Hung, Tin Hang, Wu, Ernest T. Y., Zeltiņš, Pauls, Jansons, Āris, Ullah, Aziz, Erbilgin, Nadir, Bohlmann, Joerg, Bousquet, Jean, Birol, Inanc, Clegg, Sonya M., and MacKay, John J.
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- 2024
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59. Systematic determination of a material’s magnetic ground state from first principles
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Tellez-Mora, Andres, He, Xu, Bousquet, Eric, Wirtz, Ludger, and Romero, Aldo H.
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- 2024
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60. Assessment of methane emissions from oil, gas and coal sectors across inventories and atmospheric inversions
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Tibrewal, Kushal, Ciais, Philippe, Saunois, Marielle, Martinez, Adrien, Lin, Xin, Thanwerdas, Joel, Deng, Zhu, Chevallier, Frederic, Giron, Clément, Albergel, Clément, Tanaka, Katsumasa, Patra, Prabir, Tsuruta, Aki, Zheng, Bo, Belikov, Dmitry, Niwa, Yosuke, Janardanan, Rajesh, Maksyutov, Shamil, Segers, Arjo, Tzompa-Sosa, Zitely A., Bousquet, Philppe, and Sciare, Jean
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- 2024
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61. Non occurrence of the Lavrentiev gap for a class of nonautonomous functionals
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Bousquet, Pierre, Mariconda, Carlo, and Treu, Giulia
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- 2024
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62. Intervals in the greedy Tamari posets
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Bousquet-Mélou, Mireille and Chapoton, Frédéric
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Mathematics - Combinatorics ,05A15 (Primary) 06A07, 06A11 (Secondary) - Abstract
We consider a greedy version of the $m$-Tamari order defined on $m$-Dyck paths, recently introduced by Dermenjian. Inspired by intriguing connections between intervals in the ordinary 1-Tamari order and planar triangulations, and more generally by the existence of simple formulas counting intervals in the ordinary $m$-Tamari orders, we investigate the number of intervals in the greedy order on $m$-Dyck paths of fixed size. We find again a simple formula, which also counts certain planar maps (of prescribed size) called $(m+1)$-constellations. For instance, when $m=1$ the number of intervals in the greedy order on 1-Dyck paths of length $2n$ is proved to be $\frac{3\cdot 2^{n-1}}{(n+1)(n+2)} \binom{2n}{n}$, which is also the number of bipartite maps with $n$ edges. Our approach is recursive, and uses a ``catalytic'' parameter, namely the length of the final descent of the upper path of the interval. The resulting bivariate generating function is algebraic for all $m$. We show that the same approach can be used to count intervals in the ordinary $m$-Tamari lattices as well. We thus recover the earlier result of the first author, Fusy and Pr\'eville-Ratelle, who were using a different catalytic parameter., Comment: 24 pages
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- 2023
63. Metric dimension parameterized by treewidth in chordal graphs
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Bousquet, Nicolas, Deschamps, Quentin, and Parreau, Aline
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Computer Science - Data Structures and Algorithms - Abstract
The metric dimension has been introduced independently by Harary, Melter and Slater in 1975 to identify vertices of a graph G using its distances to a subset of vertices of G. A resolving set X of a graph G is a subset of vertices such that, for every pair (u,v) of vertices of G, there is a vertex x in X such that the distance between x and u and the distance between x and v are distinct. The metric dimension of the graph is the minimum size of a resolving set. Computing the metric dimension of a graph is NP-hard even on split graphs and interval graphs. Bonnet and Purohit proved that the metric dimension problem is W[1]-hard parameterized by treewidth. Li and Pilipczuk strenghtened this result by showing that it is NP-hard for graphs of treewidth. In this article, we prove that that metric dimension is FPT parameterized by treewidth in chordal graphs.
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- 2023
64. A note on the flip distance between non-crossing spanning trees
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Bousquet, Nicolas, Gledel, Valentin, Narboni, Jonathan, and Pierron, Théo
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Computer Science - Computational Geometry ,Computer Science - Discrete Mathematics ,Mathematics - Combinatorics - Abstract
We consider spanning trees of $n$ points in convex position whose edges are pairwise non-crossing. Applying a flip to such a tree consists in adding an edge and removing another so that the result is still a non-crossing spanning tree. Given two trees, we investigate the minimum number of flips required to transform one into the other. The naive $2n-\Omega(1)$ upper bound stood for 25 years until a recent breakthrough from Aichholzer et al. yielding a $2n-\Omega(\log n)$ bound. We improve their result with a $2n-\Omega(\sqrt{n})$ upper bound, and we strengthen and shorten the proofs of several of their results.
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- 2023
65. Genetic divergence and truncation and simultaneous selection in inbred families (S1) of elephant grass for bioenergetic purposes via mixed models
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Moisés Ambrósio, Rogério Figueiredo Daher, Josefa Grasiela Silva Santana, Cleudiane Lopes Leite, Joao Victor Bousquet Duarte, Ana Kesia Faria Vidal, Maxwel Rodrigues Nascimento, Alexandre Gomes de Souza, Rafael Souza Freitas, Wanessa Francesconi Stida, João Esdras Calaça Farias, and Raiane Mariani Santos
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Biomass ,Diversity ,Energy ,Inbreeding ,Productivity ,Medicine ,Science - Abstract
Abstract The State University of North Fluminense Darcy Ribeiro (UENF) has been developing for fifteen years a breeding program that aims at the development of new cultivars of elephant grass due to its high potential and the low availability of cultivars developed by genetic breeding programs that meet the needs of producers in the State of Rio de Janeiro. In this sense, inbred families were also obtained as a way of fixing potential alleles for traits related to production, as the inbreeding process apparently does not strongly affect elephant grass in aspects related to inbreeding depression. This study aimed to estimate genetic diversity, variance components and prediction of genotypic values in 11 (S1) elephant grass families, and perform the truncation and simultaneous selection of traits using the selection index, by mixed models. The experimental design consisted of randomized blocks with 11 (S1) families, three replications, and six plants per plot. For variables dry matter production, percentage of dry matter, plant height, stem diameter, number of tillers and leaf blade width, was performed the estimation of genetic parameters and selection of the best genotypes based selection index using mixed model. The descriptors were subjected to correlation analysis, distance matrices were generated by the Mahalanobis method, and individuals were grouped by the UPGMA method. In the selection via mixed models (REML/BLUP), families 6, 11, 8, 1, 3, 7, and 9 contributed most of the genotypes selected for the evaluated traits, indicating their high potential to generate superior genotype. The selection indices via mixed models indicated that the multiplicative index presented a greater selection gain.The phenotypic correlations showed the possibility of performing an indirect selection from six evaluated traits.The genotypes were separated into 18 groups by the Mahalanobis distance, allowing the observation of a wide genetic diversity. The most divergent and productive genotypes were self-fertilized to obtain the second generation (S2), continuing the development program.
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- 2024
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66. Sit-to-stand performance in children with cerebral palsy: a population-based cross-sectional study
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Elinor Romin, Anna Lindgren, Elisabet Rodby-Bousquet, and Erika Cloodt
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Cerebral palsy ,Children ,Sit-to-stand ,Diseases of the musculoskeletal system ,RC925-935 - Abstract
Abstract Background Sit-to-stand (STS) is one of the most commonly performed functional movements in a child’s daily life that enables the child to perform functional activities such as independent transfer and to initiate walking and self-care. Children with cerebral palsy (CP) often have reduced STS ability. The aim of this study was to describe STS performance in a national based total population of children with CP and its association with age, sex, Gross Motor Function Classification System (GMFCS) level, and CP subtype. Methods This cross-sectional study included 4,250 children (2,503 boys, 1,747 girls) aged 1–18 years from the Swedish Cerebral Palsy Follow-Up Program (CPUP). STS performance was classified depending on the independence or need for support into “without support,” “with support,” or “unable.” “With support” included external support from, e.g., walls and furniture. Physical assistance from another person was classified as “unable” (dependent). Ordinal and binary logistic regression analyses were used to identify associations between STS and age, GMFCS level, and CP subtype. Results 60% of the children performed STS without support, 14% performed STS with support, and 26% were unable or needed assistance from another person. STS performance was strongly associated with GMFCS level and differed with age and subtype (p
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- 2024
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67. RIP140 regulates transcription factor HES1 oscillatory expression and mitogenic activity in colon cancer cells
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Nour Sfeir, Marilyn Kajdan, Stéphan Jalaguier, Sandrine Bonnet, Catherine Teyssier, Samuel Pyrdziak, Rong Yuan, Emilie Bousquet, Antonio Maraver, Florence Bernex, Nelly Pirot, Florence Boissière‐Michot, Audrey Castet‐Nicolas, Marion Lapierre, and Vincent Cavaillès
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colorectal cancer ,HES1 ,Notch pathway ,RIP140 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
The transcription factor receptor‐interacting protein 140 (RIP140) regulates intestinal homeostasis and tumorigenesis through Wnt signaling. In this study, we investigated its effect on the Notch/HES1 signaling pathway. In colorectal cancer (CRC) cell lines, RIP140 positively regulated HES1 gene expression at the transcriptional level via a recombining binding protein suppressor of hairless (RBPJ)/neurogenic locus notch homolog protein 1 (NICD)‐mediated mechanism. In support of these in vitro data, RIP140 and HES1 expression significantly correlated in mouse intestine and in a cohort of CRC samples, thus supporting the positive regulation of HES1 gene expression by RIP140. Interestingly, when the Notch pathway is fully activated, RIP140 exerted a strong inhibition of HES1 gene transcription controlled by the level of HES1 itself. Moreover, RIP140 directly interacts with HES1 and reversed its mitogenic activity in human CRC cells. In line with this observation, HES1 levels were associated with a better patient survival only when tumors expressed high levels of RIP140. Our data identify RIP140 as a key regulator of the Notch/HES1 signaling pathway, with a dual effect on HES1 gene expression at the transcriptional level and a strong impact on colon cancer cell proliferation.
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- 2024
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68. A meta-analysis on the effects of marker coverage, status number, and size of training set on predictive accuracy and heritability estimates from genomic selection in tree breeding
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Beaulieu, Jean, Lenz, Patrick R.N., Laverdière, Jean-Philippe, Nadeau, Simon, and Bousquet, Jean
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- 2024
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69. Effects of induced optimism on subjective states, physical activity, and stress reactivity
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Chen, Ruijia, del Rosario, Kareena, Lockman, Alee, Boehm, Julia, Bousquet-Santos, Kelb, Siegel, Erika, Mendes, Wendy Berry, and Kubzansky, Laura D
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Clinical Research ,Clinical Trials and Supportive Activities ,Behavioral and Social Science ,Optimism ,physical activity ,stress reactivity ,stress-buffering ,physiologic responses ,optimism ,Business and Management ,Psychology ,Linguistics ,Social Psychology - Abstract
This study examined effects of experimentally-induced optimism on physical activity and stress reactivity with community volunteers. Using an intervention to induce short-term optimism, we conducted two harmonized randomized experiments, performed simultaneously at separate academic institutions. All participants were randomized to either the induced optimism intervention or to a neutral control activity using essay-writing tasks. Physical activity tasks (Study 1) and stress-related physiologic responses (Study 2) were assessed during lab visits. Essays were coded for intensity of optimism. A total of 324 participants (207 women, 117 men) completed Study 1, and 118 participants (67 women, 47 men, 4 other) completed Study 2. In both studies, the optimism intervention led to greater increases in short-term optimism and positive affect relative to the control group. Although the intervention had limited effects on physical activity and stress reactivity, more optimistic language in the essays predicted increased physical activity and decreased stress reactivity.
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- 2023
70. Toward High Efficiency Water Processed Organic Photovoltaics: Controlling the Nanoparticle Morphology with Surface Energies
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Laval, Hugo, Holmes, Alexandre, Marcus, Matthew A, Watts, Benjamin, Bonfante, Gwenaël, Schmutz, Marc, Deniau, Elise, Szymanski, Robin, Lartigau‐Dagron, Christine, Xu, Xiaoxue, Cairney, Julie M, Hirakawa, Kazuhiko, Awai, Fumiyasu, Kubo, Takaya, Wantz, Guillaume, Bousquet, Antoine, Holmes, Natalie P, and Chambon, Sylvain
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Engineering ,Macromolecular and Materials Chemistry ,Materials Engineering ,Chemical Sciences ,Nanotechnology ,Bioengineering ,Affordable and Clean Energy ,Interdisciplinary Engineering ,Macromolecular and materials chemistry ,Materials engineering - Abstract
Here efficient organic photovoltaic devices fabricated from water-based colloidal dispersions with donor:acceptor composite nanoparticles achieving up to 9.98% power conversion efficiency (PCE) are reported. This high efficiency for water processed organic solar cells is attributed to morphology control by surface energy matching between the donor and the acceptor materials. Indeed, due to a low interfacial energy between donor and the acceptor, no large phase separation occurs during the nanoparticle formation process as well as upon thermal annealing. Indeed, synchrotron-based scanning transmission X-ray microscopy reveals that the internal morphology of composite nanoparticles is intermixed as well as the active layer morphology after thermal treatment. The PCE of this system reaches 85% that of devices prepared from chlorinated solvent. The gap between water-based inks and organic solvent-based inks gets narrower, which is promising for the development of eco-friendly processing and fabrication of organic photovoltaics.
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- 2023
71. Digraph redicolouring
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Bousquet, Nicolas, Havet, Frédéric, Nisse, Nicolas, Picasarri-Arrieta, Lucas, and Reinald, Amadeus
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Computer Science - Discrete Mathematics ,Mathematics - Combinatorics - Abstract
Given two $k$-dicolourings of a digraph $D$, we prove that it is PSPACE-complete to decide whether we can transform one into the other by recolouring one vertex at each step while maintaining a dicolouring at any step even for $k=2$ and for digraphs with maximum degree $5$ or oriented planar graphs with maximum degree $6$. A digraph is said to be $k$-mixing if there exists a transformation between any pair of $k$-colourings. We show that every digraph $D$ is $k$-mixing for all $k\geq \delta^*_{\min}(D)+2$, generalizing a result due to Dyer et al. We also prove that every oriented graph $\vec{G}$ is $k$-mixing for all $k\geq \delta^*_{\max}(\vec{G}) +1$ and for all $k\geq \delta^*_{\rm avg}(\vec{G})+1$. We conjecture that, for every digraph $D$, the dicolouring graph of $D$ on $k\geq \delta_{\min}^*(D)+2$ colours has diameter at most $O(|V(D)|^2)$ and give some evidences. We first prove that the dicolouring graph of any digraph $D$ on $k\geq 2\delta_{\min}^*(D) + 2$ colours has linear diameter, extending a result from Bousquet and Perarnau. We also prove that the conjecture is true when $k\geq \frac{3}{2}(\delta_{\min}^*(D)+1)$. Restricted to the special case of oriented graphs, we prove that the dicolouring graph of any subcubic oriented graph on $k\geq 2$ colours is connected and has diameter at most $2n$. We conjecture that every non $2$-mixing oriented graph has maximum average degree at least $4$, and we provide some support for this conjecture by proving it on the special case of $2$-freezable oriented graphs. More generally, we show that every $k$-freezable oriented graph on $n$ vertices must contain at least $kn + k(k-2)$ arcs, and we give a family of $k$-freezable oriented graphs that reach this bound. In the general case, we prove as a partial result that every non $2$-mixing oriented graph has maximum average degree at least $\frac{7}{2}$., Comment: 28 pages, 6 figures
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- 2023
72. On the coalitional decomposition of parameters of interest
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Idrissi, Marouane Il, Bousquet, Nicolas, Gamboa, Fabrice, Iooss, Bertrand, and Loubes, Jean-Michel
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Mathematics - Statistics Theory ,Statistics - Methodology - Abstract
Understanding the behavior of a black-box model with probabilistic inputs can be based on the decomposition of a parameter of interest (e.g., its variance) into contributions attributed to each coalition of inputs (i.e., subsets of inputs). In this paper, we produce conditions for obtaining unambiguous and interpretable decompositions of very general parameters of interest. This allows to recover known decompositions, holding under weaker assumptions than stated in the literature.
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- 2023
73. A note on highly connected $K_{2,\ell}$-minor free graphs
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Bousquet, Nicolas, Pierron, Théo, and Wesolek, Alexandra
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Mathematics - Combinatorics ,Computer Science - Discrete Mathematics ,05C75, 05C83 - Abstract
We show that every $3$-connected $K_{2,\ell}$-minor free graph with minimum degree at least $4$ has maximum degree at most $7\ell$. As a consequence, we show that every 3-connected $K_{2,\ell}$-minor free graph with minimum degree at least $5$ and no twins of degree $5$ has bounded size. Our proofs use Steiner trees and nested cuts; in particular, they do not rely on Ding's characterization of $K_{2,\ell}$-minor free graphs.
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- 2023
74. Extremal Independent Set Reconfiguration
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Bousquet, Nicolas, Durain, Bastien, Pierron, Théo, and Thomassé, Stéphan
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Mathematics - Combinatorics ,Computer Science - Discrete Mathematics ,05C35, 05C69 - Abstract
The independent set reconfiguration problem asks whether one can transform one given independent set of a graph into another, by changing vertices one by one in such a way the intermediate sets remain independent. Extremal problems on independent sets are widely studied: for example, it is well known that an $n$-vertex graph has at most $3^{n/3}$ maximum independent sets (and this is tight). This paper investigates the asymptotic behavior of maximum possible length of a shortest reconfiguration sequence for independent sets of size $k$ among all $n$-vertex graphs. We give a tight bound for $k=2$. We also provide a subquadratic upper bound (using the hypergraph removal lemma) as well as an almost tight construction for $k=3$. We generalize our results for larger values of $k$ by proving an $n^{2\lfloor k/3 \rfloor}$ lower bound.
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- 2023
75. Diagonalization Games
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Alon, Noga, Bousquet, Olivier, Larsen, Kasper Green, Moran, Shay, and Moran, Shlomo
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Mathematics - Combinatorics ,Computer Science - Computational Complexity ,Computer Science - Discrete Mathematics ,Mathematics - Logic - Abstract
We study several variants of a combinatorial game which is based on Cantor's diagonal argument. The game is between two players called Kronecker and Cantor. The names of the players are motivated by the known fact that Leopold Kronecker did not appreciate Georg Cantor's arguments about the infinite, and even referred to him as a "scientific charlatan". In the game Kronecker maintains a list of m binary vectors, each of length n, and Cantor's goal is to produce a new binary vector which is different from each of Kronecker's vectors, or prove that no such vector exists. Cantor does not see Kronecker's vectors but he is allowed to ask queries of the form"What is bit number j of vector number i?" What is the minimal number of queries with which Cantor can achieve his goal? How much better can Cantor do if he is allowed to pick his queries \emph{adaptively}, based on Kronecker's previous replies? The case when m=n is solved by diagonalization using n (non-adaptive) queries. We study this game more generally, and prove an optimal bound in the adaptive case and nearly tight upper and lower bounds in the non-adaptive case., Comment: 11 pages, added acknowledgements
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- 2023
76. Differentially-Private Bayes Consistency
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Bousquet, Olivier, Kaplan, Haim, Kontorovich, Aryeh, Mansour, Yishay, Moran, Shay, Sadigurschi, Menachem, and Stemmer, Uri
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Computer Science - Machine Learning ,Computer Science - Cryptography and Security ,Statistics - Machine Learning - Abstract
We construct a universally Bayes consistent learning rule that satisfies differential privacy (DP). We first handle the setting of binary classification and then extend our rule to the more general setting of density estimation (with respect to the total variation metric). The existence of a universally consistent DP learner reveals a stark difference with the distribution-free PAC model. Indeed, in the latter DP learning is extremely limited: even one-dimensional linear classifiers are not privately learnable in this stringent model. Our result thus demonstrates that by allowing the learning rate to depend on the target distribution, one can circumvent the above-mentioned impossibility result and in fact, learn \emph{arbitrary} distributions by a single DP algorithm. As an application, we prove that any VC class can be privately learned in a semi-supervised setting with a near-optimal \emph{labeled} sample complexity of $\tilde{O}(d/\varepsilon)$ labeled examples (and with an unlabeled sample complexity that can depend on the target distribution).
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- 2022
77. Comparative bactericidal activity of four macrolides alone and combined with rifampicin or doxycycline against Rhodococcus equi at concentrations achievable in foals
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Anne-Sophie Huguet, Ophélie Gourbeyre, Agathe Bernand, Charline Philibert, Alain Bousquet-Melou, Elodie A. Lallemand, and Aude A. Ferran
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foal ,drug combination ,synergy ,lung ,macrophage ,lung cells ,Therapeutics. Pharmacology ,RM1-950 - Abstract
IntroductionRhodococcus equi causes life-threatening respiratory disease in foals. The standard treatment typically involves a combination of rifampicin and a macrolide antibiotic. Although previous studies have demonstrated the in vitro activity of these antibiotics against Rhodococcus equi, the tested concentrations often do not reflect those achievable in foals.Material and MethodsTherefore, this study was performed to evaluate the in vitro bactericidal activity of rifampicin, doxycycline, and four macrolides (clarithromycin, azithromycin, gamithromycin and tulathromycin) individually and in combination, at concentrations observed at the target site of infection in foals. Additionally, we investigated the efficacy of these antibiotics at different pH levels to replicate the conditions in the pulmonary epithelial lining fluid and within macrophages, where R. equi can reside. We assessed the activity of antibiotics against a virulent strain of R. equi by determining the minimum inhibitory concentration (MIC) and performing checkerboard and time-kill curve assays with drugs both alone and in combination.ResultsTime-kill curves with rifampicin or doxycycline demonstrated a reduction in R. equi counts by more than 3 log10 CFU/mL. Among the macrolides, tulathromycin was ineffective, while clarithromycin achieved bacterial elimination within 24 h under both extracellular and intracellular conditions. Gamithromycin and azithromycin exhibited bactericidal activity only in extracellular conditions, with no effect on the bacteria at pH 5.8. The checkerboard assay did not reveal any strong synergistic or antagonistic effects for rifampicin or doxycycline when combined with macrolides. In time-kill curves performed with maximal local concentrations achievable in foals, the combinations of rifampicin or doxycycline with macrolides did not increase the bacterial killing rate compared with the drugs alone, except for the combination of rifampicin with azithromycin, which showed slightly faster activity. However, the lower concentrations of doxycycline and clarithromycin that might be present 24 h after treatment in foals were effective in killing bacteria under intracellular conditions only when used in combination, and not when used alone.ConclusionOur study suggests that clarithromycin can be used either alone or with doxycycline and that its use in combination with rifampicin should be reconsidered. Nevertheless, further studies are required to assess the clinical efficacy and potential side effects of doxycycline in foals.
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- 2024
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78. STRIVE pilot trial: a protocol for a multicentre pragmatic internal pilot randomised controlled trial of Structured TRaining to Improve fitness in a Virtual Environment (STRIVE) before surgery
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Alan Forster, Nicola Edwards, Jean Wong, Frances Chung, Luke T Lavallée, François Lellouche, Monica Taljaard, Tim Ramsay, James Paul, Michael Schmidt, Manoj M Lalu, Jason Chui, Stephen Choi, Shelly Au, Richard Hall, Harsha Shanthanna, Hance Clarke, Stuart Mccluskey, Marcin Wasowicz, Karim Ladha, Angela Jerath, Daniel Sellers, Thomas Schricker, Roupen Hatzakorzian, Stephen Kowalski, James Green, Daniel I McIsaac, Guillaume Martel, Merrick Zwarenstein, Sylvain Boet, Kednapa Thavorn, I Singh, Karim Abdulla, Margaret L McNeely, Jessica Spence, Emilie Belley-Cote, Julie Hallet, Herman Sehmbi, Tarit Saha, David Rosen, George Wang, Connor Brenna, Tien Le, Ruth Graham, Husein Moloo, Hilary Grocott, Kelly Vogt, Gary Dobson, Faisal Siddiqui, Alexis Turgeon, Frédérick D’Aragon, Martin Girard, Brian Cuthbertson, Timothy Jackson, Ian Gilron, Norman Buckley, Andy Liu, Naveed Siddiqui, Leyla Baghirzada, Stephen Yang, William Wang, James Kim, Neil Goldenberg, Nicolas Beaudet, Dean Fergusson, Keyvan Karkouti, Jordan Tarshis, Colin McCartney, Vishal Uppal, Christopher Prabhakar, Derek Dillane, Jordan Leitch, Ramiro Arellano, Joel Parlow, George Djaiani, Lilia Kaustov, Peter Hedlin, Andrew Milne, Heather McDonald, David Boyle, Isabelle Raiche, Lara Williams, Emily Hladkowicz, Sylvain Gagne, Celena Scheede-Bergdahl, C David Mazer, Justyna Bartoszko, Chelsia Gillis, Michael Law, Edmond Li, Sarah Sinasac, Roberta DiDonato, Rene Martin, Thomas Hemmerling, Beverley Orser, Pierre Drolet, Vatsal Trivedi, Jason McVicar, Daniel Bainbridge, Pierre Beaulieu, Faraj Abdallah, Naheed Jivraj, Heather Pierce, Hema Bagry, Rakesh Sondekoppam, Christian Lehmann, John Fuller, Derek Roberts, Homer Yang, Stuart Wright, Michael Jacka, Curtis Nickel, Rodney Breau, Daenis Camire, Nidhi Charan, Louise Sun, Susan Lee, Rachel Khadaroo, Amanda Meliambro, Jennifer O’Brien, Renée El-Gabalawy, Daniel Trottier, Keely Barnes, Laura Boland, Karina Branje, Rosaleen Chun, Antoine Eskander, Joanne Hutton, John Joanisse, Cameron Love, Thomas Mutter, Sudhir Nagpal, Pablo Serrano, Carl van Walraven, Ilun Yang, Bryan Glezerson, Sylvie Aucoin, Rebecca Auer, Gregory Bryson, Dolores McKeen, Tyrone Harrison, Puneeta Tandon, Michael Verret, Sarah McMullen, William Beaubien-Souligny, Duminda Nalaka Wijeysundera, Samantha Russell, Victor Neira, Matthias Görges, Catherine Duclos, Etienne Couture, Diem Tran, Stephan Schwarz, Alana Flexman, Terri Sun, Michelle Mozel, Olivier Royer, Gurlavine Kidd, Tyler Chesney, Humberto R Vigil, Mary Farnand, Juliette Gaudreault, Bhagya Lakshmi Ramappa Tahasildar, Julian Mansour, William Scott Beattie, André Denault, Kathryn Sparrow, Jamal Alkadri, Saleh Al-Nahdi, Siniana Avramescu, Jonathan Bailey, Alex Bak, Gabriele Baldinii, Jean-Marie Bamvita, Jillian Banfield, Michael Bautista, Jean Beaubien, Gianluca Bertolizio, Guillaume Bousquet-Dion, Scott Brudney, Neville Burke, Jean Bussières, Matthew Cameron, Francois M Carrier, Françoise Chagnon, Anton Chau, Marshall Cheng, Gilles Chiniara, Janice Chisholm, Michelle Chiu, Chris Christodoulou, Pieter de Jager, Megan Deck, Ainsley Decker, Alain Deschamps, Daniel Dubois, Laura Duggan, Tristan Dumbarton, Deborah DuMerton Shore, Kaylene Duttchen, Darcie Earle, Marie-Pierre Gagne, Nicole Gibson, Andres-Felipe Gil, Talha Gondal, Daniel Gottesman, Alexander Gregory, Alexander Grunfeld, Gregory Hare, Jennifer Héroux, Orlando Hung, Janny Ke, Brent Kennedy, Brad Kerr, Margot Klemmer, Wing Lam, Danielle Lapierre, Jean-Sebastian Lebon, Vincent Lecluyse, Alexandre Lefebvre, Nagappa Mahes, William McKay, Perseus Missirlis, Glenio Mizubuti, Peter Moliner, Corentin Monfort, Janice Montbriand, Maliha Muneer, Allana Munro, Bhanu Nalla, Wayne Nates, David Neilpovitz, Angela Neufeld, Angélica Ostiguy, Charles Overbeek, Jean P Gelinas, Gilles Plourde, Jeremy Pridham, Mateen Raazi, Saifee Rashiq, Ravi Jayas, Ravi Taneja, Rebecca Grey, Tracey Rice, Richard N Merchant, David Roach, Roanne Preston, Ron Ree, Ronald George, Jean-Dennis Roy, Rudy Noppens, Ryan McGinn, Ryan Ramos, Sonia Sampson, Corey Sawchuk, Seyed Mahdi Sedighi, Surita Sidhu, Stephanie Sobotie, Sabri Soussi, Summer Sukh Brar, Varun Suresh, Vanessa Sweet, Linda Szabo, Edmond Tan, Mullein Thorleifson, Andrea Todd, Victor Tran, Dianshi Wang, Louie Wang, Geoff Warden, Kim Wong, Vincent Wourms, Cynthia Yarnold, and Doreen Yee
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Medicine - Abstract
Introduction Home-based, virtually-supported care models may represent the most efficient and scalable approach to delivering prehabilitation services. However, virtual approaches to prehabilitation are understudied. This manuscript describes the protocol for an internal pilot randomised controlled trial of a virtually-delivered, multimodal prehabilitation intervention.Methods and analysis We will conduct a pragmatic, individual patient, internal pilot randomised controlled trial of home-based, virtually supported, multimodal prehabilitation compared with standard perioperative care in adults undergoing elective, inpatient thoracic, abdominal, pelvic and vascular surgery at five Canadian hospitals. Participants will be partially blinded; clinicians and outcome assessors will be fully blinded. The intervention consists of 3–12 weeks of a home-based, multimodal (exercise, nutrition and psychosocial support) prehabilitation programme supported through an online platform. The primary feasibility outcomes and their progression targets are (1) monthly recruitment of>6 participants at each centre, (2) intervention adherence of>75%, (3) retention of>90% of participants at the patient-reported primary outcome point of 30-days after surgery and (4) elicitation of patient, clinician and researcher-identified barriers to our pragmatic trial. A sample size of 144 participants will be adequate to estimate recruitment, adherence and retention rates with acceptable precision. All participants will be followed to either death or up to 1 year. As an internal pilot, if no substantive changes to the trial or intervention design are required, pilot participant outcome data will migrate, unanalysed by allocation, to the future full-scale trial.Ethics and dissemination Ethical approval has been granted by Clinical Trials Ontario (Project ID: 4479) and our ethics review board (Protocol Approval #20230399–01T). Results will be disseminated through presentations at scientific conferences, peer-reviewed publications, partner organisations and engagement of social and traditional media.Trial registration number ClinicalTrials.gov identifier NCT06042491. Protocol, V.1.2, dated 6 June 2024.
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- 2024
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79. Theoretical investigations on exploring Si-based heterostructures with cubic and ground-state perovskites
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Yunting Liang, Yajun Zhang, Wenyi Tong, Philippe Ghosez, Eric Bousquet, and Matjaž Spreitzer
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Physics ,QC1-999 - Abstract
First principles calculations in the framework of density functional theory (DFT) are performed to exploit replaceable perovskite oxides against the instability of traditional cubic SrTiO3 grown on silicon substrate. In this work, we consider more thermostable CaTiO3 and CaZrO3 with cubic and ground-state phase as the candidates to perform the gate dielectric. After the calibration of total energy and lattice transformation of ground-state perovskites to match with Si substrate, three categories of 2 × 2 heterostructures have been constructed and investigated through the geometrical change, atom displacement around interfacial layer, total energy and electronic structure change, under the variations on perovskite species, the concentration of interfacial layer and the thickness of perovskite film. And the results demonstrate that the category with half a monolayer of Ca/Sr atoms in interfacial layer and two unit-cell perovskite thicknesses show the type-I band alignment through their band alignment. Among this category, the heterostructure with Pnma CaZrO3 shows semiconductivity and excellent electrical property with larger band offset for the candidate of gate dielectric. This work provides a creative perspective to expand the perovskite diversity for the booming growth of integrated circuit technology.
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- 2024
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80. Long Covid: a global health issue – a prospective, cohort study set in four continents
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Synne Jenum, Renaud Tamisier, Clark D Russell, Rachel Evans, Piero Valentini, Sylvain Diamantis, Dominique Deplanque, Jordi Rello, Agnes Meybeck, Maxime Hentzien, Clotilde Allavena, André Cabié, Firouzé Bani-Sadr, Patrick Rossignol, Lionel Piroth, Mathieu Blot, Marie-Pierre Debray, François Angoulvant, Marc Leone, Ewen M Harrison, Maria Zambon, Michael Edelstein, Florentia Kaguelidou, Marc Lambert, Olivier Lairez, Tom Solomon, Carrol Gamble, Laura Marsh, Christiana Kartsonaki, Natalie Wright, Behzad Nadjm, Srinivas Murthy, Gail Carson, Jake Dunning, Laura Merson, Peter Horby, Timothy M Uyeki, Piero Olliaro, Guillermo Maestro de la Calle, Stephen R Knight, Thomas M Drake, Marlene Murris, Aurore Bousquet, Kenneth A McLean, Hugues Cordel, Marc Fabre, Laurence Bouillet, Katrina Hann, Xavier Duval, James Lee, Christian Rabaud, Paul Klenerman, Jean-Christophe Lucet, Jean-François Timsit, Jennifer Lee, David J Lowe, Nicolas Terzi, Saad Nseir, Gwenhaël Colin, Steve Webb, Kalynn Kennon, Caroline Mudara, Diana Hernández, Yazdan Yazdanpanah, Jean-François Payen, Samreen Ijaz, Joanne McPeake, Meera Chand, Catherine A Shaw, Cameron J Fairfield, Bruno Levy, Eric D'ortenzio, Pierre Delobel, Tiphaine Goulenok, Bronner P Gonçalves, Arnaud Scherpereel, Danilo Buonsenso, Mark G Pritchard, Susanne Dudman, Adrien Auvet, Caterina Caminiti, Debby Bogaert, Elisabeth Botelho-Nevers, Amandine Gagneux-Brunon, Merce Jourdain, Sue Smith, Jia Wei, Antoine Khalil, Clément Le Bihan, Nathalie Pansu, Vincent Le Moing, Victor Fomin, Christophe Fraser, Daniel Munblit, William Greenhalf, François-Xavier Lescure, Nicolas Carlier, Saye Khoo, Annemarie B Docherty, Christopher A Green, Riinu Pius, Louise Sigfrid, Sophie Halpin, Clare Jackson, Antonia Ho, Malcolm G Semple, Andrew Dagens, Carlo Palmieri, Lance Turtle, Zeno Bisoffi, Thomas Flament, Julie Mankikian, Romain Basmaci, Peter Openshaw, Rob Fowler, Tom Fletcher, Adrien Lemaignen, Pierre Tattevin, Christelle Delmas, Hélène Espérou, Claire Lévy-Marchal, Olivier Picone, Jeanne Sibiude, Cecile Yelnik, Michelle Girvan, Piero L Olliaro, Beatrice Alex, Benjamin Bach, Wendy S Barclay, Graham S Cooke, Ana da Silva Filipe, Alexander J Mentzer, Alison M Meynert, Mahdad Noursadeghi, Shona C Moore, Massimo Palmarini, William A Paxton, Georgios Pollakis, David L Robertson, Vanessa Sancho-Shimizu, Janet T Scott, Shiranee Sriskandan, David Stuart, Charlotte Summers, Emma C Thomson, Ryan S Thwaites, Lance C W Turtle, Hayley Hardwick, Wilna Oosthuyzen, Fiona Griffiths, Jo Dalton, Egle Saviciute, Stephanie Roberts, Janet Harrison, Marie Connor, Gary Leeming, Ross Hendry, Victoria Shaw, Jade Ghosn, Lucille Blumberg, Nicolas Benech, Odile Launay, Yoan Lavie-Badie, Minh Le, Elise Artaud-Macari, Muge Cevik, Nicola Latronico, Mylène Maillet, Didier Laureillard, Ben Morton, Claire Hastie, Nicholas Sedillot, Anne-Sophie Boureau, Laurent Abel, Guillaume Martin-Blondel, Valérie Garrait, Isabelle Delacroix, Andrea Cortegiani, Jean-Benoît Arlet, Raphaël Borie, Kévin Bouiller, Vincent Langlois, Mélanie Roriz, Vincent Dubée, John H Amuasi, Madiha Hashmi, Edwin Jesudason, Jan Cato Holter, Anders Benjamin Kildal, Luis Felipe Reyes, Anna Beltrame, Sulaiman Lakoh, Stéphanie Fry, Lynsey Goodwin, Laurent Plantier, Anna Casey, Denis Malvy, Nina Jamieson, François Dubos, Jean-Sébastien Hulot, Paola Rodari, Frank Bloos, Cécile Tromeur, Paul Loubet, Marina Esposito-Farèse, France Mentré, Valérie Gaborieau, Cécile Goujard, Vincent Thibault, Adam Ali, Sadie Kelly, Fernando A Bozza, Bertrand Dussol, Marion Schneider, Marielle Buisson, Yves Levy, Carine Roy, Walter Picard, Olivier Sanchez, Nazir Lone, Antoine Kimmoun, Roberto Roncon-Albuquerque, Nathan Peiffer-Smadja, Julien Poissy, Lila Bouadma, Bruno Lina, Maude Bouscambert, Alexandre Gaymard, Gilles Peytavin, Jeremie Guedj, Claire Andrejak, Cedric Laouenan, Anissa Chair, Samira Laribi, Marie-Capucine Tellier, Sandrine Couffin-Cadiergues, Ventzislava Petrov-Sanchez, Alpha Diallo, Sarah Tubiana, Patrick Imbert, Emmanuelle Mercier, Waasila Jassat, Arsene Kpangon, Dominique Luton, Simone Piva, Sophie Mahy, Pierre-Adrien Bolze, Sarah Moore, Raphael Favory, Andrea Angheben, Andrea Rossanese, Matthew Hall, Johann Auchabie, Christophe Rapp, Vincent Peigne, Fredrik Müller, Christl A Donnelly, François Goehringer, Elodie Curlier, Catherine Chirouze, Vegard Skogen, Stéphane Jaureguiberry, Laurent Bitker, Hodane Yonis, Laurent Mandelbrot, Jérémie Pasquier, Bato Hammarström, Thushan de Silva, Polina Bugaeva, Julie Chas, Dario Sinatti, Arne Søraas, Murray Wham, Sara Clohisey, Seán Keating, Thibault Chiarabini, Agnes Sommet, Hugues Aumaître, Charlotte Charpentier, Sylvie LeGac, Sarah E McDonald, Jeanne Truong, Anne-Hélène Boivin, Mariachiara Ippolito, Ellen Pauley, Diane Descamps, Sérgio Gaião, Stéphane Lasry, Amanda Rojek, Charlotte Salmon Gandonniere, Sebastien Preau, Benoit Thill, Karine Faure, Denis Garot, Grégory Corvaisier, Elsa Nyamankolly, Merete Ellingjord-Dale, Eva Geraud, Barbara Wanjiru Citarella, Kévin Alexandre, Nathalie Allou, Séverine Ansart, Laurène Azemar, Cecile Azoulay, Delphine Bachelet, Claudine Badr, Valeria Balan, Marie Bartoli, Joaquín Baruch, Jules Bauer, Alexandra Bedossa, Husna Begum, Marine Beluze, Delphine Bergeaud, Giulia Bertoli, Simon Bessis, Sybille Bevilcaqua, Karine Bezulier, Krishna Bhavsar, Laetitia Bodenes, Isabela Bolaños, Olivier Bouchaud, Sabelline Bouchez, Camile Bouisse, Marielle Boyer-Besseyre, Axelle Braconnier, Ingrid G Bustos, Denis Butnaru, Eder Caceres, Cyril Cadoz, Valentine Campana, Pauline Caraux-Paz, Thierry Carmoi, Marie-Christine Carret, Maire-Laure Casanova, Guylaine Castor-Alexandre, François-Xavier Catherine, Minerva Cervantes-Gonzalez, Catherine Chakveatze, Jean-Marc Chapplain, Antoine Cheret, Bernard Cholley, Marie-Charlotte Chopin, Roxane Courtois, Stéphanie Cousse, Alexa Debard, Nathalie DeCastro, Romain Decours, Eve Defous, Karen Delavigne, Elisa Demonchy, Emmanuelle Denis, Mathilde Desvallées, Kévin Didier, Jean-Luc Diehl, Vincent Dinot, Fara Diop, Alphonsine Diouf, Félix Djossou, Céline Dorival, Nathalie Dournon, Murray Dryden, Alexandre Ducancelle, Paul Dunand, Brigitte Elharrar, Philippine Eloy, Isabelle Enderle, Ilka Engelmann, Vincent Enouf, Olivier Epaulard, Manuel Etienne, Isabelle Fabre, François-Xavier Ferrand, Eglantine Ferrand Devouge, Nicolas Ferriere, Céline Ficko, Erwan Fourn, Rostane Gaci, Jean-Charles Gagnard, Esteban Garcia-Gallo, Tristan Gigante, Guillermo Giordano, Valérie Gissot, Petr Glybochko, Marie Gominet, Isabelle Gorenne, Laure Goubert, Pascal Granier, Segolène Greffe, Martin Guego, Romain Guery, Anne Guillaumot, Laurent Guilleminault, Thomas Guimard, Ali Hachemi, Nadir Hadri, Rebecca Hamidfar, Lars Heggelund, Rupert Higgins, Hikombo Hitoto, Alexandre Hoctin, Isabelle Hoffmann, Ikram Houas, Margaux Isnard, Danielle Jaafar, Salma Jaafoura, Julien Jabot, Florence Jego, Cédric Joseph, Ouifiya Kafif, Sabina Kali, Younes Kerroumi, Marie Lachatre, Marie Lacoste, Marie Lagrange, Fabrice Laine, Antonio Lalueza, Marie Langelot-Richard, Delphine Lariviere, Andy Law, Laurent Lefebvre, Bénédicte Lefebvre, Benjamin Lefèvre, Jean-Daniel Lelievre, Véronique Lemee, Anthony Lemeur, Quentin Lepiller, Olivier Lesens, Mathieu Lesouhaitier, Geoffrey Liegeon, Guillaume Lingas, Sylvie Lion-Daolio, Marine Livrozet, Bouchra Loufti, Guillame Louis, Liem Luong, Moïse Machado, Gabriel Macheda, Rafael Mahieu, Thomas Maitre, Victoria Manda, Aldric Manuel, Samuel Markowicz, Martin Martinot, Mathieu Mattei, Laurence Maulin, Thierry Mazzoni, Cécile Mear-Passard, Antoine Merckx, Mayka Mergeay-Fabre, Vanina Meysonnier, Mehdi Mezidi, Isabelle Michelet, Lucia Moro, Julien Moyet, Jimmy Mullaert, Nadège Neant, Nikita Nekliudov, Anthony Nghi, Duc Nguyen, Nadia Ouamara, Rachida Ouissa, Eric Oziol, Justine Pages Maïder Pagadoy, Aurélie Papadopoulos, Bruno Pastene, Christelle Paul, Florent Peelman, Daniel Perez, Thomas Perpoint, Vincent Pestre, Ryadh Pokeerbux, Diane Ponscarme, Marie Rafiq, Blandine Rammaert, Stanislas Rebaudet, Sarah Redl, Anne-Sophie Resseguier, Matthieu Revest, Laurent Richier, Patrick Rispal, Karine Risso, Olivier Robineau, Manuel Rosa-Calatrava, Benoît Roze, Hélène Salvator, Pierre-François Sandrine, Benjamine Sarton, Eric Senneville, Albert Sotto, Sarah Stabler, Andrey Svistunov, Coralie Tardivon, François Téoulé, Olivier Terrier, Simon-Djamel Thiberville, Peter S Timashev, Noémie Tissot, Tiffany Trouillon, Christelle Tual, Noémie Vanel, Charline Vauchy, Aurélie Veislinger, Fanny Vuotto, Aurélie Wiedemann, Marion Zabbe, David Zucman, Silvio Hamacher, Ekaterina Pazukhina, Allegra Chatterjee, Kyle Gomez, Matteo Puntoni, Oksana Kruglova, Yock Ping Chow, Yash Doshi, Sara Isabel Duque Vallejo, Elsa D Ibáñez-Prada, Yuli V Fuentes, Margaret E O'Hara, Tigist Menkir, Amal Abrous, Younes Ait Tamlihat, Aliya Mohammed Alameen, Marta Alessi, Kazali Enagnon Alidjnou, Jean Baptiste Assie, Eyvind W Axelsen, John Kenneth Baillie, José Luis Bernal Sobrino, Sonja Hjellegjerde Brunvoll, Roar Bævre-Jensen, Jose Andres Calvache, Léo Chenard, Juan Luis Cruz Bermúdez, Jaime Cruz Rojo, Charlene Da Silveira, John Arne Dahl, Etienne De Montmollin, Cristina De Rose, Fernanda Dias Da Silva, Thomas Drake, Amiel A Dror, Anne Margarita Dyrhol-Riise, Linn Margrete Eggesbø, Mohammed El Sanharawi, William Finlayson, Aline-Marie Florence, Linda Gail Skeie, Noelia García Barrio, Anatoliy Gavrylov, Louis Gerbaud Morlaes, Yanay Gorelik, Mette Stausland Istre, Silje Bakken Jørgensen, Karl Trygve Kalleberg, Beathe Kiland Granerud, Eyrun Floerecke Kjetland Kjetland, Gry Kloumann Bekken, Galyna Kutsyna, Nadhem Lafhej, Cyril Le Bris, Georges Le Falher, Lucie Le Fevre, Quentin Le Hingrat, Marion Le Maréchal, Soizic Le Mestre, Gwenaël Le Moal, Hervé Le Nagard, Sophie Letrou, Wei Shen Lim, Andreas Lind, Carlos Lumbreras Bermejo, Miles Lunn, Olga Martynenko, Roberta Meta, Lina Morales Cely, Clara Mouton Perrot, Alamin Mustafa, Karl Erik Müller, Ebrahim Ndure, Anders Benteson Nygaard, Claudia Milena Orozco-Chamorro, Paul Otiku, Miguel Pedrera Jiménez, Frank Olav Pettersen, Chiara Piubelli, Víctor Quirós González, Else Quist-Paulsen, Dag Henrik Reikvam, Antonia Ricchiuto, Aleksander Rygh Holten, Nadia Saidani, Pablo Serrano Balazote, Nassima Si Mohammed, Lene Bergendal Solberg, Edouard Soum, Elisabetta Spinuzza, Trude Steinsvik, Birgitte Stiksrud, Mathew Thorpe, Vadim Tieroshyn, Kristian Tonby, Anders Tveita, Sylvie Van Der Werf, Paul Henri Wicky, Ibrahim Richard Bangura, Leonardo Bastos, Daniel Cassaglia, Barbara Citarella, Sarah Duque, Anne Margarita Dyrhol Riise, Annelies Gillesen, Bronner P Goncalvez, Margareta O’Hara, Lars Hegelund, Aquiles Henriquez Trujillo, Elsa D Ibañez, Jane Ireson, Oksana Krugalova, Sam Lissaeur, Sinnadurai Manohan, Prasan K Panda, Daniel R Plotkin, Liliana Resende, Sergio Ruiz Saltana, Steffi Ryckaert, Girish Sindhwani Pulm, and Caroline Vika
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Medicine (General) ,R5-920 ,Infectious and parasitic diseases ,RC109-216 - Abstract
Introduction A proportion of people develop Long Covid after acute COVID-19, but with most studies concentrated in high-income countries (HICs), the global burden is largely unknown. Our study aims to characterise long-term COVID-19 sequelae in populations globally and compare the prevalence of reported symptoms in HICs and low-income and middle-income countries (LMICs).Methods A prospective, observational study in 17 countries in Africa, Asia, Europe and South America, including adults with confirmed COVID-19 assessed at 2 to
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- 2024
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81. A molecular standard for circulating HBV RNA detection and quantification assays in patients with chronic hepatitis B
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Alexia Paturel, Francesca Casuscelli di Tocco, Delphine Bousquet, Marie-Laure Plissonnier, Xavier Grand, Hyosun Tak, Françoise Berby, Caroline Scholtès, Barbara Testoni, Fabien Zoulim, and Massimo Levrero
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hepatitis B virus (HBV) ,chronic hepatitis B (CHB) ,biomarker ,pregenomic RNA (pgRNA) ,standard ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background & Aims: Circulating HBV RNAs have been proposed as a biomarker that reflects the transcriptional activity of covalently closed circular DNA (cccDNA) and may help to evaluate HBV treatment activity. Different research assays have been proposed and, although two PCR-based research use only investigational assays have been developed, the lack of standardized protocols represents an important limitation. Here we have designed and generated a stable clonal cell line producing an RNA-based standard for the calibration of PCR-based circulating HBV RNA assays. Methods: HBV RNA-producing Huh7-derived stable cell lines were generated by transfecting pTriEX plasmids containing 1.1 unit length HBV DNA genomes carrying mutations in the catalytic site (YMAA mutation) and the TP domain (Y63F) of the polymerase, and the ε-loop of the pregenomic (pg)RNA (mutation A1G). Results: The clonal cell line (Huh7-3D29), carrying a double YMAA and Y63F mutation, displayed, and maintained over several passages in culture, a high RNA secretion phenotype with negligible residual secreted HBV DNA. Density gradient centrifugation showed that most of the secreted HBV RNA from Huh7-3D29 cells was detected in naked capsid and virion-like particles and only a minority in small extracellular vescicles. Nanopore sequencing of 5’RACE products shows that the majority of the Huh7-3D29-secreted HBV RNAs start at the 5' end of pgRNA and pgRNA-derived spliced RNAs. Finally, Huh7-3D29 cells showed a high and up-scalable secreted RNA yield allowing 1,300 standard curves in 9 days from one flask. Conclusion: We generated a clonal cell line that produces high quantities of HBV RNAs with very low quantities of contaminating HBV DNAs, representing a stable source of RNA standard for HBV RNA assay calibration. Impact and implications:: Several investigational assays and two research use only assays have been developed to detect and quantify circulating HBV RNAs, an emerging biomarker of covalently closed circular DNA transcriptional activity and target engagement by new HBV treatments. The lack of a unique molecular standard for circulating HBV RNA quantification represents an important limitation. Here we describe the generation of a stable clonal cell line producing and secreting an RNA-based standard containing all the HBV RNA species found in HBV patients’ sera (e.g. pgRNA, HBx transcripts). This new RNA standard can be used to calibrate all PCR-based assays for circulating HBV RNA quantification to evaluate, in a non-invasive manner, the size of the transcriptionally active cccDNA pool and the activity of novel strategies aimed at curing HBV infection.
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- 2024
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82. Concurrent validity, cut‐offs and ability to change of patient‐reported outcome measures for rhinitis and asthma in MASK‐air®
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Jean Bousquet, Bernardo Sousa‐Pinto, Josep M. Anto, Anna Bedbrook, Wienczyslawa Czarlewski, Ignacio J. Ansotegui, Karl‐C. Bergmann, Fulvio Braido, Luisa Brussino, Lorenzo Cecchi, Claudia Chaves Loureiro, Alvaro A. Cruz, Philippe Devillier, Alessandro Fiocchi, Bilun Gemicioglu, Tari Haahtela, Juan Carlos Ivancevich, Ludger Klimek, Marek Kulus, Piotr Kuna, Maciej Kupczyk, Violeta Kvedariene, Desiree E. Larenas‐Linnemann, Gilles Louis, Renaud Louis, Michael Makris, Mario Morais‐Almeida, Marek Niedoszytko, Ken Ohta, Markus Ollert, Nikolaos Papadopoulos, Vincenzo Patella, Benoit Pétré, Oliver Pfaar, Francesca Puggioni, Santiago Quirce, Frederico S. Regateiro, Nicolas Roche, Philip W. Rouadi, Boleslaw Samolinski, Joaquin Sastre, Florence Schleich, Nicola Scichilone, Luis Taborda‐Barata, Sanna Toppila‐Salmi, Arunas Valiulis, Ilgim Vardaloglu Koyuncu, Maria Teresa Ventura, Arzu Yorgancioglu, Joao A. Fonseca, and Torsten Zuberbier
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asthma ,digital health ,EQ‐5D ,rhinitis ,visual analogue scale ,Immunologic diseases. Allergy ,RC581-607 - Abstract
Abstract Patient‐reported outcome measures (PROMs) are used to assess a patient's health status at a particular point in time. They are essential in the development of person‐centred care. This paper reviews studies performed on PROMs for assessing AR and asthma control, in particular VAS scales that are included in the app MASK‐air® (Mobile Airways Sentinel networK) for asthma and rhinitis. VASs were initially developed on paper and pencil and tested for their criterion validity, cut‐offs and responsiveness. Then, a multicentric, multinational, double‐blind, placebo‐controlled, randomised control trial (DB‐PC‐RCT) using an electronic VAS form was carried out. Finally, with the development of MASK‐air® in 2015, previously validated VAS questions were adapted to the digital format and further methodologic evaluations were performed. VAS for asthma, rhinitis, conjunctivitis, work and EQ‐5D are included in the app. Additionally, two control‐medication scores for allergic symptoms of asthma (e‐DASTHMA) were validated for their criterion validity, cut‐offs and responsiveness.
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- 2024
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83. The evolving reality of digital health
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Nana Bit-Avragim, Jean Bousquet, Stefano Cantù, Stefano Omboni, Elisabetta Ravot, and Paul Tunnah
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Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
Myriad digital health interventions, applications, devices and technologies have, and are, being developed to help refine and personalise medicine from the patient, healthcare professional (HCP), healthcare system and industry perspectives. At a gathering of leaders in digital health, discussion included the current landscape of such digital health tools (DHTs), with specific examples from cardiology and respiratory medicine, and both the benefits and sometime downfalls of such tools. While DHTs can help patients and HCPs detect and monitor health conditions, the experts discussed how adoption of DHTs may be hampered by issues such as access to technology; data privacy and security concerns; technology integration into current healthcare systems; cost and reimbursement; and lack of guidelines and regulatory hurdles. The experts suggested solutions to such issues, including wider availability of healthcare ‘booths’ local to a patient; easy to understand and use phone applications; patient and HCP incentives to use DHTs and clear paths to adoption within a healthcare system. These should help with integration of DHTs into the healthcare system to aid shared decision-making and, ultimately, streamline and personalise healthcare for all.
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- 2024
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84. ENOVAT: the European Network for Optimization of Veterinary Antimicrobial Treatment [version 2; peer review: 2 approved]
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Annet Heuvelink, Marcel Erhard, Gudrun Overesch, Lisbeth Rem Jessen, Jonathan Gómez Raja, Ludovic Pelligand, Dorina Timofte, Karolina Scahill, Kees Veldman, Ana P Vale, Els M Broens, Luis Pedro Carmo, Fergus Allerton, Peter Damborg, Chantal Britt, Alain Bousquet-Mélou, Iskra Cvetkovikj, and Petra Cagnardi
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Antimicrobial ,antimicrobial resistance ,antimicrobial treatment ,treatment guideline ,ECOFF ,MALDI-TOF MS ,eng ,Science ,Social Sciences - Abstract
The global antimicrobial resistance crisis has been the driver of several international strategies on antimicrobial stewardship. For their implementation at the field level, the veterinary sector encounters several specific challenges and in particular: (i) a shortage of experts in key disciplines related to antimicrobial stewardship, (ii) a lack of evidence-based antimicrobial treatment guidelines, and (iii) inferior diagnostic tests available compared to human medicine. The present white paper describes how the COST Action ENOVAT (the European Network for Optimization of Veterinary Antimicrobial Treatment, CA18217), comprising 332 persons from 51 countries, worked towards solutions to these challenges. Initially, surveys were conducted to explore the present state in Europe in terms of existing antimicrobial use guidelines and microbiology practices performed. Concurrently, various research activities were launched to optimize diagnostics, including development of epidemiological cut-offs, clinical breakpoints and matrix-assisted laser desorption ionization time of flight mass spectrometry interpretive criteria. Also, guidelines drafting groups working towards evidence-based antimicrobial treatment guidelines for six conditions in food-producing and companion animals were established. The processes and outcomes, also in terms of capacity building, are summarized in this white paper where emphasis is placed on sustainability of the activities. Although several ENOVAT initiatives and spin-off projects will continue beyond the Action, we recommend that a new European veterinary research agenda is launched focusing on research and funding leading to long-term impacts on veterinary antimicrobial use.
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- 2024
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85. Retinal Ischemic Perivascular Lesions Are Associated With Stroke in Individuals With Atrial Fibrillation
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Christine Y. Bakhoum, Adrian Au, Elodie Bousquet, Mitchelle Matesva, Maxwell B. Singer, Christina Jayaraj, Veronica A. Romero‐Morales, Swathi Somisetty, Ahmad Santina, Bryce Bajar, Anthony N. DeMaria, Michael H. Goldbaum, Judith Meadows, Erica S. Spatz, David Sarraf, and Mathieu F. Bakhoum
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atrial fibrillation ,optical coherence tomography ,retinal ischemic perivascular lesion ,RIPLs ,stroke ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Published
- 2024
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86. Planetary Exploration Horizon 2061 Report, Chapter 4: From planetary exploration goals to technology requirements
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Lasue, Jérémie, Bousquet, Pierre, Blanc, Michel, André, Nicolas, Beck, Pierre, Berger, Gilles, Bolton, Scott, Bunce, Emma, Chide, Baptiste, Foing, Bernard, Hammel, Heidi, Lellouch, Emmanuel, Griton, Lea, Mcnutt, Ralph, Maurice, Sylvestre, Mousis, Olivier, Opher, Merav, Sotin, Christophe, Senske, Dave, Spilker, Linda, Vernazza, Pierre, and Zong, Qiugang
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Astrophysics - Instrumentation and Methods for Astrophysics ,Astrophysics - Earth and Planetary Astrophysics - Abstract
This chapter reviews for each province and destination of the Solar System the representative space missions that will have to be designed and implemented by 2061 to address the six key science questions about the diversity, origins, workings and habitability of planetary systems (described in chapter 1) and to perform the critical observations that have been described in chapters 3 and partly 2. It derives from this set of future representative missions, some of which will have to be flown during the 2041-2061 period, the critical technologies and supporting infrastructures that will be needed to fly these challenging missions, thus laying the foundation for the description of technologies and infrastructures for the future of planetary exploration that is given in chapters 5 and 6, respectively., Comment: 83 pages, 23 figures, 7 tables, Horizon 2061 is a science-driven, foresight exercise, for future scientific investigations
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- 2022
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87. Singular orthotropic functionals with nonstandard growth conditions
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Bousquet, Pierre, Brasco, Lorenzo, and Leone, Chiara
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Mathematics - Analysis of PDEs ,35J75, 35B65, 49K20 - Abstract
We pursue the study of a model convex functional with orthotropic structure and nonstandard growth conditions, this time focusing on the sub-quadratic case. We prove that bounded local minimizers are locally Lipschitz. No restriction on the ratio between the highest and the lowest growth rates are needed. The result holds also in presence of a non-autonomous lower order term, under sharp integrability assumptions. Finally, we prove higher differentiability of bounded local minimizers, as well., Comment: 45 pages
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- 2022
88. I4U System Description for NIST SRE'20 CTS Challenge
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Lee, Kong Aik, Kinnunen, Tomi, Colibro, Daniele, Vair, Claudio, Nautsch, Andreas, Sun, Hanwu, He, Liang, Liang, Tianyu, Wang, Qiongqiong, Rouvier, Mickael, Bousquet, Pierre-Michel, Das, Rohan Kumar, Bailo, Ignacio Viñals, Liu, Meng, Deldago, Héctor, Liu, Xuechen, Sahidullah, Md, Cumani, Sandro, Zhang, Boning, Okabe, Koji, Yamamoto, Hitoshi, Tao, Ruijie, Li, Haizhou, Giménez, Alfonso Ortega, Wang, Longbiao, and Buera, Luis
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Electrical Engineering and Systems Science - Audio and Speech Processing ,Computer Science - Artificial Intelligence ,Computer Science - Sound - Abstract
This manuscript describes the I4U submission to the 2020 NIST Speaker Recognition Evaluation (SRE'20) Conversational Telephone Speech (CTS) Challenge. The I4U's submission was resulted from active collaboration among researchers across eight research teams - I$^2$R (Singapore), UEF (Finland), VALPT (Italy, Spain), NEC (Japan), THUEE (China), LIA (France), NUS (Singapore), INRIA (France) and TJU (China). The submission was based on the fusion of top performing sub-systems and sub-fusion systems contributed by individual teams. Efforts have been spent on the use of common development and validation sets, submission schedule and milestone, minimizing inconsistency in trial list and score file format across sites., Comment: SRE 2021, NIST Speaker Recognition Evaluation Workshop, CTS Speaker Recognition Challenge, 14-12 December 2021
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- 2022
89. Polar meron-antimeron networks in strained and twisted bilayers
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Bennett, Daniel, Chaudhary, Gaurav, Slager, Robert-Jan, Bousquet, Eric, and Ghosez, Philippe
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Condensed Matter - Materials Science ,Condensed Matter - Mesoscale and Nanoscale Physics - Abstract
Out-of-plane polar domain structures have recently been discovered in strained and twisted bilayers of inversion symmetry broken systems such as hexagonal boron nitride. Here we show that this symmetry breaking also gives rise to an in-plane component of polarization, and the form of the total polarization is determined purely from symmetry considerations. The in-plane component of the polarization makes the polar domains in strained and twisted bilayers topologically non-trivial, forming a network of merons and antimerons (half-skyrmions and half-antiskyrmions). For twisted systems, the merons are of Bloch type whereas for strained systems they are of N\'eel type. We propose that the polar domains in strained or twisted bilayers may serve as a platform for exploring topological physics in layered materials and discuss how control over topological phases and phase transitions may be achieved in such systems., Comment: Accepted version
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- 2022
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90. The smallest 5-chromatic tournament
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Bellitto, Thomas, Bousquet, Nicolas, Kabela, Adam, and Pierron, Théo
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Computer Science - Discrete Mathematics ,Mathematics - Combinatorics - Abstract
A coloring of a digraph is a partition of its vertex set such that each class induces a digraph with no directed cycles. A digraph is $k$-chromatic if $k$ is the minimum number of classes in such partition, and a digraph is oriented if there is at most one arc between each pair of vertices. Clearly, the smallest $k$-chromatic digraph is the complete digraph on $k$ vertices, but determining the order of the smallest $k$-chromatic oriented graphs is a challenging problem. It is known that the smallest $2$-, $3$- and $4$-chromatic oriented graphs have $3$, $7$ and $11$ vertices, respectively. In 1994, Neumann-Lara conjectured that a smallest $5$-chromatic oriented graph has $17$ vertices. We solve this conjecture and show that the correct order is $19$.
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- 2022
91. The Dynamics of Sharpness-Aware Minimization: Bouncing Across Ravines and Drifting Towards Wide Minima
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Bartlett, Peter L., Long, Philip M., and Bousquet, Olivier
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Computer Science - Machine Learning ,Mathematics - Optimization and Control ,Statistics - Machine Learning - Abstract
We consider Sharpness-Aware Minimization (SAM), a gradient-based optimization method for deep networks that has exhibited performance improvements on image and language prediction problems. We show that when SAM is applied with a convex quadratic objective, for most random initializations it converges to a cycle that oscillates between either side of the minimum in the direction with the largest curvature, and we provide bounds on the rate of convergence. In the non-quadratic case, we show that such oscillations effectively perform gradient descent, with a smaller step-size, on the spectral norm of the Hessian. In such cases, SAM's update may be regarded as a third derivative -- the derivative of the Hessian in the leading eigenvector direction -- that encourages drift toward wider minima.
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- 2022
92. Compositional Semantic Parsing with Large Language Models
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Drozdov, Andrew, Schärli, Nathanael, Akyürek, Ekin, Scales, Nathan, Song, Xinying, Chen, Xinyun, Bousquet, Olivier, and Zhou, Denny
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Computer Science - Computation and Language ,Computer Science - Artificial Intelligence - Abstract
Humans can reason compositionally when presented with new tasks. Previous research shows that appropriate prompting techniques enable large language models (LLMs) to solve artificial compositional generalization tasks such as SCAN. In this work, we identify additional challenges in more realistic semantic parsing tasks with larger vocabulary and refine these prompting techniques to address them. Our best method is based on least-to-most prompting: it decomposes the problem using prompting-based syntactic parsing, then uses this decomposition to select appropriate exemplars and to sequentially generate the semantic parse. This method allows us to set a new state of the art for CFQ while requiring only 1% of the training data used by traditional approaches. Due to the general nature of our approach, we expect similar efforts will lead to new results in other tasks and domains, especially for knowledge-intensive applications., Comment: Fixed metadata. No other changes
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- 2022
93. Quantile-constrained Wasserstein projections for robust interpretability of numerical and machine learning models
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Idrissi, Marouane Il, Bousquet, Nicolas, Gamboa, Fabrice, Iooss, Bertrand, and Loubes, Jean-Michel
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Mathematics - Optimization and Control ,Mathematics - Probability ,Mathematics - Statistics Theory ,Statistics - Machine Learning - Abstract
Robustness studies of black-box models is recognized as a necessary task for numerical models based on structural equations and predictive models learned from data. These studies must assess the model's robustness to possible misspecification of regarding its inputs (e.g., covariate shift). The study of black-box models, through the prism of uncertainty quantification (UQ), is often based on sensitivity analysis involving a probabilistic structure imposed on the inputs, while ML models are solely constructed from observed data. Our work aim at unifying the UQ and ML interpretability approaches, by providing relevant and easy-to-use tools for both paradigms. To provide a generic and understandable framework for robustness studies, we define perturbations of input information relying on quantile constraints and projections with respect to the Wasserstein distance between probability measures, while preserving their dependence structure. We show that this perturbation problem can be analytically solved. Ensuring regularity constraints by means of isotonic polynomial approximations leads to smoother perturbations, which can be more suitable in practice. Numerical experiments on real case studies, from the UQ and ML fields, highlight the computational feasibility of such studies and provide local and global insights on the robustness of black-box models to input perturbations.
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- 2022
94. Fe–Ni-based alloys as highly active and low-cost oxygen evolution reaction catalyst in alkaline media
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Magnier, Lucile, Cossard, Garance, Martin, Vincent, Pascal, Céline, Roche, Virginie, Sibert, Eric, Shchedrina, Irina, Bousquet, Richard, Parry, Valérie, and Chatenet, Marian
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- 2024
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95. Token Sliding on Graphs of Girth Five
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Bartier, Valentin, Bousquet, Nicolas, Hanna, Jihad, Mouawad, Amer E., and Siebertz, Sebastian
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- 2024
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96. Factors Affecting Usage of a Digital Asthma Monitoring Application by Old-Age Asthmatics Living in Inner Central Portugal
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Abreu MIT, Santos AF, Gama JMR, Valente S, Valente MJ, Pereira H, Regateiro F, Sousa-Pinto B, Ventura MT, Bousquet J, and Taborda-Barata L
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asthma ,mhealth ,digital literacy ,disease monitoring ,old-age ,Geriatrics ,RC952-954.6 - Abstract
Magda Ines Teixeira Abreu,1,* Adalberto Fernandes Santos,1– 3,* Jorge MR Gama,4 Salete Valente,1,5 Maria Jesus Valente,1,5 Henrique Pereira,6,7 Frederico Regateiro,2,8– 10 Bernardo Sousa-Pinto,11,12 Maria Teresa Ventura,13,14 Jean Bousquet,15– 17 Luis Taborda-Barata1,2,18,19 1Faculty of Health Sciences, University of Beira Interior, Covilhã, Portugal; 2CICS-UBI – Health Sciences Research Centre, University of Beira Interior, Covilhã, Portugal; 3Faculty of Medicine, Agostinho Neto University, Luanda, Angola; 4Center of Mathematics and Applications, Faculty of Sciences, University of Beira Interior, Covilhã, Portugal; 5Department of Pulmonology, Cova da Beira University Hospital Centre, Covilhã, Portugal; 6Psychology and Education Department, Faculty of Human and Social Sciences, University of Beira Interior, Covilhã, Portugal; 7The Research Center in Sports Sciences, Health Sciences and Human Development (CIDESD), University of Beira Interior, Covilhã, Portugal; 8Institute of Immunology, Faculty of Medicine of the University of Coimbra, Coimbra, Portugal; 9Centro de Neurociências e Biologia Celular, CIBB, University of Coimbra, Coimbra, Portugal; 10Allergy & Clinical Immunology Unit, Centro Hospitalar e Universitário de Coimbra, Coimbra, Portugal; 11MEDCIDS - Department of Community Medicine, Information and Health Decision Sciences, Faculty of Medicine, University of Porto, Porto, Portugal; 12CINTESIS - Center for Health Technology and Services Research, University of Porto, Porto, Portugal; 13Unit of Geriatric Immunoallergology, University of Bari Medical School, Bari, Italy; 14Institute of Science of Food Production, National Research Council (Ispa-Cnr), Bari, Italy; 15Institute of Allergology, Charité – Universitätsmedizin Berlin, Corporate Member of Freie Universität Berlin and Humboldt-Universität zu Berlin, Berlin, Germany; 16Allergology and Immunology, Fraunhofer Institute for Translational Medicine and Pharmacology ITMP, Berlin, Germany; 17Department of Pulmonology, University Hospital Montpellier, Montpellier, France; 18UBIAir - Clinical & Experimental Lung Centre, UBIMedical, University of Beira Interior, Covilhã, Portugal; 19Department of Immunoallergology, Cova da Beira University Hospital Centre, Covilhã, Portugal*These authors contributed equally to this workCorrespondence: Luis Taborda-Barata, Faculty of Health Sciences, University of Beira Interior, Avenida Infante D, Covilhã, Henrique, 6200-506, Portugal, Tel +351 275329001, Fax +351 275329003, Email tabordabarata@fcsaude.ubi.ptPurpose: To analyse factors affecting the ability to use the digital asthma monitoring application Mask-Air® in old-age individuals living in inland Portugal.Patients and Methods: In this observational study, patients with medically confirmed asthma who agreed to participate were interviewed and subdivided into Non-users Group: those who could not use the application and Users Group: those who could. Sociodemographic and psychological data, comorbidities, and asthma status were compared between groups. Assessment of reasons for refusal was based on a 6-item questionnaire.Results: Among the 72 sequentially recruited patients (mean age±SD 73.26± 5.43 yrs; 61 women; 11 men), 44 (61.1%; mean age±SD 74.64± 5.68 yrs; 38 women; 6 men)) were included in Non-users Group and 28 (38.9%; mean age±SD 71.11± 4.26 yrs; 23 women; 5 men) in Users Group. Non-users Group patients were significantly older, had lower socioeconomic level, and more frequently had severe asthma (25% vs 3.6%; Odds ratio=0.08 (95% CI=0.01– 0.81; p=0.033)) and diabetes (32.6% vs 7.4%; Odds ratio=0.17 (95% CI=0.03– 0.80; p=0.025)) than Users Group. The main reasons for not using the App were “Lack of required hardware” (n=35) and “Digital illiteracy” (n=26), but lack of interest to use the App among those who had conditions to use it was uncommon.Conclusion: Most old-age asthmatics living in Beira Interior either lack a smartphone or digital skills, which are significant obstacles to implementing app-based monitoring studies.Plain Language Summary: This study was done to see whether it was possible to use a mobile phone application (App) to help old-age asthmatics living in inner Central Portugal better monitor and self-manage their disease.The researchers interviewed a group of 72 patients with proven asthma who agreed to participate in the study. This group was subdivided into two subgroups: Non-users Group (44 patients) included those who could not use the App because they did not have a smartphone; Users Group (28 patients) included those who had all the conditions to use the App. Patients were helped to download the App (called MASK-Air), were given a thorough explanation about it, and about how it should be used on a daily basis to monitor their asthma symptoms.The researchers found that patients in Non-users Group were significantly older, had worse socioeconomic conditions, and more often had severe asthma and diabetes. They also discovered that the main reasons for not using the App were lack of a smartphone and not knowing how to use a smartphone.These results show that lacking a smartphone and not knowing how to use digital tools are frequent situations in old-age asthmatics living in inner Central Portugal, and these may be obstacles for patients in monitoring their own asthma symptoms.Keywords: asthma, mHealth, digital literacy, disease monitoring, old-age
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- 2024
97. BIN1 regulates actin-membrane interactions during IRSp53-dependent filopodia formation
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Laura Picas, Charlotte André-Arpin, Franck Comunale, Hugo Bousquet, Feng-Ching Tsai, Félix Rico, Paolo Maiuri, Julien Pernier, Stéphane Bodin, Anne-Sophie Nicot, Jocelyn Laporte, Patricia Bassereau, Bruno Goud, Cécile Gauthier-Rouvière, and Stéphanie Miserey
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Biology (General) ,QH301-705.5 - Abstract
Abstract Amphiphysin 2 (BIN1) is a membrane and actin remodeling protein mutated in congenital and adult centronuclear myopathies. Here, we report an unexpected function of this N-BAR domain protein BIN1 in filopodia formation. We demonstrated that BIN1 expression is necessary and sufficient to induce filopodia formation. BIN1 is present at the base of forming filopodia and all along filopodia, where it colocalizes with F-actin. We identify that BIN1-mediated filopodia formation requires IRSp53, which allows its localization at negatively-curved membrane topologies. Our results show that BIN1 bundles actin in vitro. Finally, we identify that BIN1 regulates the membrane-to-cortex architecture and functions as a molecular platform to recruit actin-binding proteins, dynamin and ezrin, to promote filopodia formation.
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- 2024
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98. A Fab of trastuzumab to treat HER2 overexpressing breast cancer brain metastases
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Eurydice Angeli, Justine Paris, Olivier Le Tilly, Céline Desvignes, Guillaume Gapihan, Didier Boquet, Frédéric Pamoukdjian, Diaddin Hamdan, Marthe Rigal, Florence Poirier, Didier Lutomski, Feriel Azibani, Alexandre Mebazaa, Amaury Herbet, Aloïse Mabondzo, Géraldine Falgarone, Anne Janin, Gilles Paintaud, and Guilhem Bousquet
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HER2 breast cancer ,Brain metastases ,Fab ,Trastuzumab ,Pharmacokinetic ,Diseases of the blood and blood-forming organs ,RC633-647.5 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Despite major therapeutic advances for two decades, including the most recently approved anti-HER2 drugs, brain metastatic localizations remain the major cause of death for women with metastatic HER2 breast cancer. The main reason is the limited drug passage of the blood-brain barrier after intravenous injection and the significant efflux of drugs, including monoclocal antibodies, after administration into the cerebrospinal fluid. We hypothesized that this efflux was linked to the presence of a FcRn receptor in the blood-brain barrier. To overcome this efflux, we engineered two Fab fragments of trastuzumab, an anti-HER2 monoclonal antibody, and did a thorough preclinical development for therapeutic translational purpose. We demonstrated the safety and equal efficacy of the Fabs with trastuzumab in vitro, and in vivo using a patient-derived xenograft model of HER2 overexpressing breast cancer. For the pharmacokinetic studies of intra-cerebrospinal fluid administration, we implemented original rat models with catheter implanted into the cisterna magna. After intraventricular administration in rats, we demonstrated that the brain-to-blood efflux of Fab was up to 10 times lower than for trastuzumab, associated with a two-fold higher brain penetration compared to trastuzumab. This Fab, capable of significantly reducing brain-to-blood efflux and enhancing brain penetration after intra-cerebrospinal fluid injection, could thus be a new and original effective drug in the treatment of HER2 breast cancer brain metastases, which will be demonstrated by a phase I clinical trial dedicated to women in resort situations. Graphical Abstract
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- 2024
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99. Concomitant medication, comorbidity and survival in patients with breast cancer
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Elise Dumas, Beatriz Grandal Rejo, Paul Gougis, Sophie Houzard, Judith Abécassis, Floriane Jochum, Benjamin Marande, Annabelle Ballesta, Elaine Del Nery, Thierry Dubois, Samar Alsafadi, Bernard Asselain, Aurélien Latouche, Marc Espie, Enora Laas, Florence Coussy, Clémentine Bouchez, Jean-Yves Pierga, Christine Le Bihan-Benjamin, Philippe-Jean Bousquet, Judicaël Hotton, Chloé-Agathe Azencott, Fabien Reyal, and Anne-Sophie Hamy
- Subjects
Science - Abstract
Abstract Between 30% and 70% of patients with breast cancer have pre-existing chronic conditions, and more than half are on long-term non-cancer medication at the time of diagnosis. Preliminary epidemiological evidence suggests that some non-cancer medications may affect breast cancer risk, recurrence, and survival. In this nationwide cohort study, we assessed the association between medication use at breast cancer diagnosis and survival. We included 235,368 French women with newly diagnosed non-metastatic breast cancer. In analyzes of 288 medications, we identified eight medications positively associated with either overall survival or disease-free survival: rabeprazole, alverine, atenolol, simvastatin, rosuvastatin, estriol (vaginal or transmucosal), nomegestrol, and hypromellose; and eight medications negatively associated with overall survival or disease-free survival: ferrous fumarate, prednisolone, carbimazole, pristinamycin, oxazepam, alprazolam, hydroxyzine, and mianserin. Full results are available online from an interactive platform ( https://adrenaline.curie.fr ). This resource provides hypotheses for drugs that may naturally influence breast cancer evolution.
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- 2024
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100. Equino-plano-valgus foot in cerebral palsy –clinical principles and surgical techniques review (world perspective). Report from the 5th edition of the Transatlantic Orthopedic Surgery Webinar 2023
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Łukasz Woźniak, Bartosz Musielak, Peter Bernius, Michael Wade Shrader, Elisabet Rodby-Bousquet, Henry G. Chambers, Lin Feng, Martin Gough, Kerr Graham, Muharrem Inan, Ashok Johari, Alexander Krebs, Simon Lalor, Unni Narayanan, Tom Novacheck, and Marek Jóźwiak
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cerebral palsy ,equino-plano-valgus foot ,plano-valgus foot ,lever-arm deformities of lower limbs ,Orthopedic surgery ,RD701-811 - Abstract
Introduction. The fifth edition of the Transatlantic Orthopedic Surgery Webinar 2023 occurred on December 4, 2023. The webinar’s main topic was treating equino-plano-valgus foot in children with cerebral palsy (CP). The event included speakers from Austria, Australia, China, India, Canada, Germany, Poland, Sweden, Turkey, the USA and the UK. Results. The first general session presented epidemiology, biomechanics, muscle function, equino-plano-valgus foot prevention options, and the Silverskiöld test in clinical assessment. It also discussed the principles of deformation treatment, options for orthotic treatment, and pathology treatment in adults suffering from CP. The surgical sessions presented comprehensive surgical techniques for the treatment of clubfoot equinus: sliding calcaneal osteotomy, lateral column lengthening with talonavicular arthrodesis, use of an expandable cage for the lateral column lengthening, double arthrodesis with the transfer of the peroneal muscles, percutaneous soft tissue release with/without arthroereisis, lateral column lengthening with arthroereisis, Grice procedure with talonavicular arthrodesis, lateral column lengthening with medial cuneiform bone plantarflexion osteotomy, lateral column lengthening with duplication of the talonavicular capsule, talonavicular and calcaneocuboid arthrodesis, transfer of the tibialis anterior muscle to the peroneal tertius muscle. The second general session presented methods of assessing the results of clubfoot treatment and postoperative rehabilitation protocols involving upright positioning and walking. Conclusion. The most important conclusions from the event are: clinical assessment and understanding the pathophysiology of the defect is crucial for its proper treatment; non-surgical treatment is recommended under the age of 6; between the ages of 6 and 14, surgical methods that preserve joint function predominate; after the age of 14 a large percentage of patients require performing joint arthrodesis. Nevertheless, arthrodesis should be avoided to correct flexible deformities and to treat patients with high functional requirements. The webinar audience included 583 people from 50 countries. Most participants came from Poland, Spain, Turkey, and Great Britain.
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- 2024
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