298 results on '"Andreas Link"'
Search Results
52. A Hypothesized Mechanism for Chronic Pancreatitis Caused by the N34S Mutation of Serine Protease Inhibitor Kazal-Type 1 Based on Conformational Studies
- Author
-
Norman Geist, Andreas Link, Mihaela Delcea, Julia Mayerle, Markus M. Lerch, Marcel Gabor, Lukas Schulig, Martin Kulke, and Felix Nagel
- Subjects
0301 basic medicine ,Immunology ,Mutant ,medicine.disease_cause ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Immunology and Allergy ,Serine protease ,replica exchange ,Mutation ,biology ,Transition (genetics) ,Protease inhibitor complex ,Chemistry ,Active site ,molecular dynamics simulations ,Hypothesis ,umbrella sampling ,Trypsin ,medicine.disease ,trypsin ,030104 developmental biology ,Biochemistry ,030220 oncology & carcinogenesis ,biology.protein ,Pancreatitis ,transition path sampling ,Journal of Inflammation Research ,medicine.drug - Abstract
Martin Kulke,1 Felix Nagel,1 Lukas Schulig,2 Norman Geist,1 Marcel Gabor,1 Julia Mayerle,3 Markus M Lerch,4 Andreas Link,2 Mihaela Delcea1 1Institute of Biochemistry, University of Greifswald, Greifswald, Germany; 2Institute of Pharmacy, University of Greifswald, Greifswald, Germany; 3Department of Medicine II, Ludwig-Maximilian University of Munich, Munich, Germany; 4Department of Medicine a, University Medicine Greifswald, Greifswald, GermanyCorrespondence: Mihaela Delcea; Martin KulkeInstitute of Biochemistry, University of Greifswald, Felix-Hausdorff-Straße 4, Greifswald, 17487, GermanyTel +49 3834 420 4423Fax +49 3834 420 4377Email delceam@uni-greifswald.de; makulke@web.dePurpose: Although strongly related, the pathophysiological effect of the N34S mutation in the serine protease inhibitor Kazal type 1 (SPINK1) in chronic pancreatitis is still unknown. In this study, we investigate the conformational space of the human cationic trypsin-serine protease inhibitor complex.Methods: Simulations with molecular dynamics, replica exchange, and transition pathway methods are used.Results: Two main binding states of the inhibitor to the complex were found, which explicitly relate the influence of the mutation site to conformational changes in the active site of trypsin.Conclusion: Based on our result, a hypothesis is formulated that explains the development of chronic pancreatitis through accelerated digestion of the mutant by trypsin.Keywords: trypsin, molecular dynamics simulations, replica exchange, transition path sampling, umbrella sampling
- Published
- 2021
53. Nuclear import of BCL11B is mediated by a classical nuclear localization signal and not the Krüppel-like zinc fingers
- Author
-
Martin Delin, Piotr Grabarczyk, Lukas Schulig, Maren Depke, Bogusław Machaliński, Dorota Rogińska, Christian Schmidt, Hannes Forkel, and Andreas Link
- Subjects
Zinc finger ,Cell Nucleus ,BCL11B ,Tumor Suppressor Proteins ,Nuclear Localization Signals ,Active Transport, Cell Nucleus ,HIV Infections ,Zinc Fingers ,Cell Biology ,Biology ,Cell biology ,Krüppel ,NLS ,Animals ,Amino Acid Sequence ,Nuclear protein ,Nuclear transport ,Transcription factor ,Nuclear localization sequence - Abstract
The Krüppel-like transcription factor (KLF) BCL11B is characterized by a wide tissue distribution and crucial functions in key developmental and cellular processes, as well as in various pathologies including cancer and HIV infection. Although the basics of BCL11B activity and relevant interactions with other proteins have been uncovered, how this exclusively nuclear protein localizes to its compartment remained unclear. Here, we demonstrate that unlike other KLFs, BCL11B does not require the C-terminal DNA-binding domain to pass through the nuclear envelope but has an independent, previously unidentified, nuclear localization signal (NLS), which is located distantly from the zinc finger domains and fulfills the essential criteria of being an autonomous NLS. First, it can redirect a heterologous cytoplasmic protein to the nucleus. Second, its mutation causes aberrant localization of the protein of origin. Finally, we provide experimental and in silico evidences of the direct interaction with importin-α. The relative conservation of this motif allows formulating a consensus sequence (K/R)K-X13–14-KR+K++ (‘+’ indicates amino acids with similar chemical properties), which can be found in all BCL11B orthologs among vertebrates and in the closely related protein BCL11A.
- Published
- 2021
54. Protocol for isolating murine kidney tubules and ex vivo cell death assays
- Author
-
Alexia Belavgeni, Francesca Maremonti, and Andreas Linkermann
- Subjects
Cell Biology ,Health Sciences ,Molecular Biology ,Science (General) ,Q1-390 - Abstract
Summary: Isolating kidney tubules offers insights into their biological function without stroma, vascular cells, and immune system interference. Our murine tubule isolation protocol focuses on ex vivo cell death assays. We describe steps for solution preparation; kidney extraction, decapsulation, and slicing; and tubule isolation. We also outline assays like western blotting, lactate dehydrogenase release assay, and live-cell imaging of vital dyes during experimental acute tubular necrosis. This adaptable protocol allows the generation of outgrown primary tubular cells that maintain the features of tubular cells. : Publisher’s note: Undertaking any experimental protocol requires adherence to local institutional guidelines for laboratory safety and ethics.
- Published
- 2024
- Full Text
- View/download PDF
55. Author response for 'Increased B Cell activity with consumption of activated monocytes in severe COVID‐19 patients'
- Author
-
Moritz Bewarder, Sigrun Smola, Lorenz Thurner, Frank Neumann, Robert Bals, Dominic Kaddu-Mulindwa, Yvonne Bewarder, Vadim Lesan, Andreas Link, Philipp M. Lepper, Benedikt Balensiefer, Joerg Thomas Bittenbring, Frank Lammert, Manfred Ahlgrimm, Torben Rixecker, Stephan Stilgenbauer, Konstantin Christofyllakis, Stefan Wagenpfeil, Marcin Krawczyk, Martina Seiffert, and Igor Kos
- Subjects
Consumption (economics) ,medicine.anatomical_structure ,Coronavirus disease 2019 (COVID-19) ,Immunology ,medicine ,Biology ,B cell - Published
- 2021
56. Directed Evolution of a Halide Methyltransferase Enables Biocatalytic Synthesis of Diverse SAM Analogs
- Author
-
Qingyun Tang, Christoph W. Grathwol, Shuke Wu, Christoffel P. S. Badenhorst, Andreas Link, Aşkın S. Aslan-Üzel, Ioannis V. Pavlidis, and Uwe T. Bornscheuer
- Subjects
S-Adenosylmethionine ,SAM Analogs | Hot Paper ,Methyltransferase ,Stereochemistry ,halide methyltransferase ,Iodide ,Alkylation ,010402 general chemistry ,01 natural sciences ,Catalysis ,chemistry.chemical_compound ,SAM analog ,Humans ,chemistry.chemical_classification ,010405 organic chemistry ,Communication ,Allyl iodide ,Regioselectivity ,bioalkylation ,protein engineering ,Methyltransferases ,General Chemistry ,Nuclear magnetic resonance spectroscopy ,Directed evolution ,Communications ,0104 chemical sciences ,chemistry ,Biocatalysis ,methylation ,Methyl iodide - Abstract
Biocatalytic alkylations are important reactions to obtain chemo‐, regio‐ and stereoselectively alkylated compounds. This can be achieved using S‐adenosyl‐l‐methionine (SAM)‐dependent methyltransferases and SAM analogs. It was recently shown that a halide methyltransferase (HMT) from Chloracidobacterium thermophilum can synthesize SAM from SAH and methyl iodide. We developed an iodide‐based assay for the directed evolution of an HMT from Arabidopsis thaliana and used it to identify a V140T variant that can also accept ethyl‐, propyl‐, and allyl iodide to produce the corresponding SAM analogs (90, 50, and 70 % conversion of 15 mg SAH). The V140T AtHMT was used in one‐pot cascades with O‐methyltransferases (IeOMT or COMT) to achieve the regioselective ethylation of luteolin and allylation of 3,4‐dihydroxybenzaldehyde. While a cascade for the propylation of 3,4‐dihydroxybenzaldehyde gave low conversion, the propyl‐SAH intermediate could be confirmed by NMR spectroscopy., Biocatalytic alkylations are valuable for late‐stage functionalization but are limited by the availability of S‐adenosyl‐l‐methionine analogs. Directed evolution was used to create an engineered halide methyltransferase capable of converting cheap and readily available alkyl iodides into a number of SAM analogs. Used in cascades with methyltransferases, this enables chemo‐, regio‐ and stereoselective alkylations which are difficult to achieve by chemical means.
- Published
- 2021
- Full Text
- View/download PDF
57. Timely and individualized heart failure management: need for implementation into the new guidelines
- Author
-
Norbert Frey, Michael Böhm, Andreas Link, Jonathan Slawik, Johann Bauersachs, Jan Wintrich, Amr Abdin, Mitja Lainscak, Ingrid Kindermann, Christian Werner, and Nikolaus Marx
- Subjects
medicine.medical_specialty ,Guanylate Cyclase Stimulators ,Heart failure ,Comorbidity ,Review ,Outcomes ,Sacubitril ,Implantable defibrillators ,Cardiac Resynchronization Therapy ,Renin-Angiotensin System ,Internal medicine ,Heart rate ,medicine ,Humans ,Precision Medicine ,Ejection fraction ,business.industry ,Cardiovascular Agents ,General Medicine ,medicine.disease ,Management ,Treatment ,Valsartan ,Practice Guidelines as Topic ,Cardiology ,Cardiology and Cardiovascular Medicine ,business ,Ivabradine ,medicine.drug - Abstract
Clinical research in cardiology 110(8), 1150-1158 (2021). doi:10.1007/s00392-021-01867-2, Published by Springer, Berlin
- Published
- 2021
58. Considering the Fate of Evaporated Water across Basin Boundaries - Implications for Water Footprinting
- Author
-
Stephanie Eisner, Ruud van der Ent, Matthias Finkbeiner, Markus Berger, and Andreas Link
- Subjects
geography ,geography.geographical_feature_category ,Atmospheric moisture ,Impact assessment ,Drinking ,Evaporation ,Drainage basin ,Environmental engineering ,Water ,General Chemistry ,Structural basin ,atmospheric moisture ,Footprinting ,evaporation recycling ,water footprint ,life cycle assessment ,Water Supply ,Environmental Chemistry ,Environmental science ,WAVE ,Recycling ,life cycle impact assessment ,Life-cycle assessment ,Water use ,water consumption - Abstract
Water consumption along value chains of goods and services has increased globally and led to increased attention on water footprinting. Most global water consumption is accounted for by evaporation (E), which is connected via bridges of atmospheric moisture transport to other regions on Earth. However, the resultant source-receptor relationships between different drainage basins have not yet been considered in water footprinting. Based on a previously developed data set on the fate of land evaporation, we aim to close this gap by using comprehensive information on evaporation recycling in water footprinting for the first time. By considering both basin internal evaporation recycling (BIER; >5% in 2% of the world's basins) and basin external evaporation recycling (BEER; >50% in 37% of the world's basins), we were able to use three types of water inventories (basin internal, basin external, and transboundary inventories), which imply different evaluation perspectives in water footprinting. Drawing on recently developed impact assessment methods, we produced characterization models for assessing the impacts of blue and green water evaporation on blue water availability for all evaluation perspectives. The results show that the negative effects of evaporation in the originating basins are counteracted (and partly overcompensated) by the positive effects of reprecipitation in receiving basins. By aggregating them, combined net impacts can be determined. While we argue that these offset results should not be used as a standalone evaluation, the water footprint community should consider atmospheric moisture recycling in future standards and guidelines.
- Published
- 2021
59. Flucytosine‐based prodrug activation by cold physical plasma
- Author
-
Mohsen Ahmadi, Felix Potlitz, Andreas Link, Thomas von Woedtke, Zahra Nasri, and Kristian Wende
- Subjects
Structure-Activity Relationship ,Plasma Gases ,Cell Line, Tumor ,Drug Discovery ,Flucytosine ,Pharmaceutical Science ,Prodrugs ,Reactive Oxygen Species - Abstract
Reactive oxygen species (ROS) are known to trigger drug release from arylboronate-containing ROS-responsive prodrugs. In cancer cells, elevated levels of ROS can be exploited for the selective activation of prodrugs via Baeyer-Villiger type oxidation rearrangement sequences. Here, we report a proof of concept to demonstrate that these cascades can as well be initiated by cold physical plasma (CPP). An analog of a recently reported fluorouracil prodrug based on the less toxic drug 5-fluorocytosine (5-FC) was synthesized with a view to laboratory safety reasons and used as a model compound to prove our hypothesis that CPP is suitable as a trigger for the prodrug activation. Although the envisioned oxidation and rearrangement with successive loss of boronic acid species could be achieved by plasma treatment, the anticipated spontaneous liberation of 5-FC was inefficient in the model case. However, the obtained results suggest that custom-tailored CPP-responsive prodrugs might become an evolving research field.
- Published
- 2022
60. Modeling the use and end-of-life phase of pharmaceuticals in support of a life cycle inventory analysis – Case study on different antibiotics in Germany
- Author
-
Rieke A.A. Schulte, Andreas Link, Marc-William Siegert, and Matthias Finkbeiner
- Subjects
Pharmaceutical Science ,Environmental Chemistry ,Management, Monitoring, Policy and Law ,Pollution - Published
- 2022
61. Enantioselective Supercritical Fluid Chromatography (SFC) for Chiral Metabolomics
- Author
-
Andreas Link, Georg M. Fassauer, and Robert K. Hofstetter
- Subjects
Chromatography ,Metabolomics ,Chemistry ,Supercritical fluid chromatography ,Enantioselective synthesis - Published
- 2020
62. Author’s reply to anonymous referees
- Author
-
Andreas Link
- Published
- 2020
63. Acoustic erythrocytometer for mechanically probing cell viscoelasticity
- Author
-
Thomas Franke and Andreas Link
- Subjects
education.field_of_study ,Materials science ,Erythrocytes ,Field (physics) ,Viscosity ,Acoustics ,Surface acoustic wave ,Population ,Biomedical Engineering ,Bioengineering ,General Chemistry ,Acoustic wave ,Deformation (meteorology) ,Biochemistry ,Viscoelasticity ,Quantitative Biology::Cell Behavior ,Relaxation (physics) ,Suspension (vehicle) ,education - Abstract
We demonstrate an acoustic device to mechanically probe a population of red blood cells at the single cell level. The device operates by exciting a surface acoustic wave in a microfluidic channel creating a stationary acoustic wave field of nodes and antinodes. Erythrocytes are attracted to the nodes and are deformed. Using a stepwise increasing and periodically oscillating acoustic field we study the static and dynamic deformation of individual red blood cells one by one. We quantify the deformation by the Taylor deformation index D and relaxation times τ1 and τ2 that reveal both the viscous and elastic properties of the cells. The precision of the measurement allows us to distinguish between individual cells in the suspension and provides a quantitative viscoelastic fingerprint of the blood sample at single cell resolution. The method overcomes limitations of other techniques that provide averaged values and has the potential for high-throughput.
- Published
- 2020
64. Activation of Sirtuin 2 Inhibitors Employing Photoswitchable Geometry and Aqueous Solubility
- Author
-
Lukas Schulig, Andreas Link, Nathalie Wössner, Steven Behnisch‐Cornwell, Christoph W. Grathwol, Manfred Jung, Oliver Einsle, and Lin Zhang
- Subjects
azo dyes ,Photoisomerization ,Pyridines ,01 natural sciences ,Biochemistry ,Isozyme ,chemistry.chemical_compound ,Structure-Activity Relationship ,sirtuins ,Sirtuin 2 ,Drug Discovery ,Humans ,photopharmacology ,General Pharmacology, Toxicology and Pharmaceutics ,Enzyme Inhibitors ,Derivatization ,Pharmacology ,biology ,Full Paper ,epigenetics ,Dose-Response Relationship, Drug ,Molecular Structure ,010405 organic chemistry ,Chemistry ,Organic Chemistry ,Water ,Biological activity ,Full Papers ,Photochemical Processes ,Combinatorial chemistry ,0104 chemical sciences ,photoswitches ,010404 medicinal & biomolecular chemistry ,Histone ,Targeted drug delivery ,Solubility ,Sirtuin ,biology.protein ,Molecular Medicine ,Selectivity ,Azo Compounds - Abstract
Because isoenzymes of the experimentally and therapeutically extremely relevant sirtuin family show high similarity, addressing the unique selectivity pocket of sirtuin 2 is a promising strategy towards selective inhibitors. An unrelated approach towards selective inhibition of isoenzymes with varied tissue distribution is targeted drug delivery or spatiotemporal activation by photochemical activation. Azologization of two nicotinamide‐mimicking lead structures was undertaken to combine both approaches and yielded a set of 33 azobenzenes and azopyridines that have been evaluated for their photochemical behaviour and bioactivity. For some compounds, inhibitory activity reached the sub‐micromolar range in their thermodynamically favoured E form and could be decreased by photoisomerization to the metastable Z form. Besides, derivatization with long‐chain fatty acids yielded potent sirtuin 2 inhibitors, featuring another intriguing aspect of azo‐based photoswitches. In these compounds, switching to the Z isomer increased aqueous solubility and thereby enhanced biological activity by up to a factor of 21. The biological activity of two compounds was confirmed by hyperacetylation of sirtuin specific histone proteins in a cell‐based activity assay., Switched into action: Besides fine‐tuning molecular geometry for enzyme inhibition, photoinduced isomerization of azopyridine‐based nicotinamide mimics results in improved aqueous solubility, enforcing the effect on target protein sirtuin 2. The resulting Sirt2 inhibitor could be used to study binding events in cellular systems with spatiotemporal control by two independent molecular and supramolecular effects.
- Published
- 2020
65. Supplementary material to 'The fate of land evaporation – A global dataset'
- Author
-
Andreas Link, Ruud van der Ent, Markus Berger, Stephanie Eisner, and Matthias Finkbeiner
- Published
- 2020
66. Der Flaschenhals – von der Forschung zur Entwicklung
- Author
-
Milton T. Stubbs, Gerhard Klebe, and Andreas Link
- Abstract
Die Wurzeln der Arzneimittelforschung reichen zuruck bis in die Anfange der Menschheitsgeschichte. Von jeher war es der Traum, auf gezieltem Weg zu Therapeutika zu gelangen. Schon fur die ersten Hochkulturen ist der Einsatz pflanzlicher, mineralischer oder tierischer Drogen belegt. Im Mittelalter suchten die Alchimisten nach dem Lebenselixier, das alle Krankheiten zu heilen vermag – leider vergebens. Bis zum Anfang des 19. Jahrhunderts beschrankte sich die Arzneimitteltherapie indessen auf die Verabreichung nicht-standardisierter Naturstoffgemische und anorganischer Chemikalien. Viele der damals verfolgten Konzepte entspringen der traditionellen.
- Published
- 2020
67. Epigastric Pain After COVID-19 Vaccination
- Author
-
Markus Casper, Lorenz Thurner, Robert Holz, Marcin Krawczyk, and Andreas Link
- Subjects
Adult ,Venous Thrombosis ,Portal System ,Hepatology ,ChAdOx1 nCoV-19 ,Gastroenterology ,Humans ,Female ,Endoscopy, Digestive System ,Thrombocytopenia ,Abdominal Pain - Published
- 2022
68. Supercritical fluid extraction (SFE) of ketamine metabolites from dried urine and on-line quantification by supercritical fluid chromatography and single mass detection (on-line SFE–SFC–MS)
- Author
-
Andreas Link, Robert K. Hofstetter, and Georg M. Fassauer
- Subjects
Analyte ,Hot Temperature ,Calibration curve ,Clinical Biochemistry ,Urine ,Mass spectrometry ,Sensitivity and Specificity ,01 natural sciences ,Biochemistry ,Analytical Chemistry ,Drug Stability ,Tandem Mass Spectrometry ,Humans ,Chromatography ,Filter paper ,010405 organic chemistry ,Chemistry ,010401 analytical chemistry ,Supercritical fluid extraction ,Reproducibility of Results ,Chromatography, Supercritical Fluid ,Cell Biology ,General Medicine ,0104 chemical sciences ,Dilution ,Linear Models ,Supercritical fluid chromatography ,Ketamine - Abstract
On-line solid-phase supercritical fluid extraction (SFE) and chromatography (SFC) coupled to mass spectrometry (MS) has been evaluated for its usefulness with respect to metabolic profiling and pharmacological investigations of ketamine in humans. The aim of this study was to develop and validate a rapid, highly selective and sensitive SFE–SFC–MS method for the quantification of ketamine and its metabolites in miniature amounts in human urine excluding liquid-liquid extraction (LLE). Several conditions were optimized systematically following the requirements of the European Medicines Agency: selectivity, carry-over, calibration curve parameters (LLOQ, range and linearity), within- and between-run accuracy and precision, dilution integrity, matrix effect, and stability. The method, which required a relatively small volume of human urine (20 μL per sample), was validated for pharmacologically and toxicologically relevant concentrations ranging from 25.0 to 1000 ng/mL (r2 > 0.995). The lower limit of quantification (LLOQ) for all compounds was found to be as low as 0.5 ng. In addition, stability of analytes during removal of water from the urine samples using different conditions (filter paper or ISOLUTE® HM-N) was studied. In conclusion, the method developed in this study can be successfully applied to studies of ketamine metabolites in humans, and may pave the way for routine application of on-line SFE–SFC–MS in clinical investigations.
- Published
- 2018
69. Synthesis and potassium KV7 channel opening activity of thioether analogues of the analgesic flupirtine
- Author
-
Lukas Schulig, Kristin Beirow, Anja Bodtke, Abdrrahman Shemsu Surur, Patrick J. Bednarski, Christian Bock, and Andreas Link
- Subjects
Liver injury ,010405 organic chemistry ,Potassium ,Organic Chemistry ,Analgesic ,chemistry.chemical_element ,Sulfoxide ,Voltage-gated potassium channel ,Pharmacology ,medicine.disease ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Sulfone ,010404 medicinal & biomolecular chemistry ,chemistry.chemical_compound ,chemistry ,Thioether ,medicine ,Physical and Theoretical Chemistry ,Flupirtine ,medicine.drug - Abstract
Flupirtine, an opener of neuronal voltage gated potassium channels (KV7.2/3), has been used as a therapeutic alternative for pain treatment in patients refractory to NSAIDs and opioids. Because flupirtine is associated with rare but fatal drug-induced liver injury that may result from the formation of toxic metabolites upon metabolic oxidation, we synthesized novel derivatives with the goal of identifying equally active and ultimately safer KV7.2/3 channel openers. Four thioether analogues were designed to lack a nitrogen atom that would be a prerequisite for the formation of toxic para-quinone diimines, and form sulfoxide and sulfone metabolites instead. KV7.2/3 channel opening activity and hepatotoxicity data of twelve novel flupirtine analogues, four thioethers and their respective sulfoxide and sulfone metabolites are reported.
- Published
- 2018
70. Correlation Analysis of Protein Expression of 10 HDAC/Sirtuin Isoenzymes with Sensitivities of 23 Anticancer Drugs in 17 Cancer Cell Lines and Potentiation of Drug Activity by Co-Treatment with HDAC Inhibitors
- Author
-
Steven Behnisch-Cornwell, Christoph W. Grathwol, Lukas Schulig, Anika Voigt, Daniel Baecker, Andreas Link, and Patrick J. Bednarski
- Subjects
Cancer Research ,correlation analysis ,lomustine ,anticancer drugs ,cisplatin ,histone deacetylases ,HDAC inhibitors ,sirtuins ,sirtuin inhibitors ,topotecan ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Article ,Oncology ,RC254-282 - Abstract
Simple Summary Protein expression profiles of 10 HDAC/Sirtuin isoenzymes in two panels of human cancer cell lines were compared with each other and with the potencies of various anticancer drugs by Pearson and Spearman correlation analysis to identify patterns of enzyme expression and anticancer activity. Furthermore, the NCI COMPARE database was used to identify possible correlations between the mRNA expression in a 60 cancer cell panel and the potency of the same anticancer drugs. While several interesting correlations were found within both data sets, none of these correlations were identical in the two sets of data, suggesting that protein and mRNA expression profiles are not comparable. Combination treatments with several HDAC inhibitors with a number of the anticancer drugs revealed interesting synergistic effects that were in keeping with some of the correlations predicted by our protein expression analysis. Abstract Inhibiting the activity of histone deacetylase (HDAC) is an ongoing strategy in anticancer therapy. However, to our knowledge, the relationships between the expression of HDAC proteins and the antitumor drug sensitivity of cancer cells have not been studied until now. In the current work, we investigated the relative expression profiles of 10 HDAC isoenzymes comprising the classes I–III (HDAC1/2/4/6; Sirt1/2/3/5/6/7) in a panel of 17 cancer cell lines, including the breast, cervix, oesophageal, lung, oral squamous, pancreas, as well as urinary bladder carcinoma cells. Correlations between the data of mRNA expression for these enzymes obtained from the National Cancer Institute (NCI) 60 cancer cell line program were also examined. Next, we performed univariate analysis between the expression patterns of HDAC/Sirt isoenzymes with the sensitivity of a 16 cell panel of cancer cell lines towards several antitumor drugs. In a univariate correlation analysis, we found a strong relation between Sirt2 expression and cytotoxicity caused by busulfan, etoposide, and hydroxyurea. Moreover, it was identified that Sirt5 correlates with the effects exerted by oxaliplatin or topotecan, as well as between HDAC4 expression and these two drugs. Correlations between the data of mRNA expression for enzymes with the potencies of the same anticancer agents obtained from the NCI 60 cancer cell line program were also found, but none were the same as those we found with our protein expression data. Additionally, we report here the effects upon combination of the approved HDAC inhibitor vorinostat and one other known inhibitor trichostatin A as well as newer hetero-stilbene and diazeno based sirtuin inhibitors on the potency of cisplatin, lomustine, and topotecan. For these three anticancer drugs, we found a significantly enhanced cytotoxicity when co-incubated with HDAC inhibitors, demonstrating a potentially beneficial influence of HDAC inhibition on anticancer drug treatment.
- Published
- 2021
71. Acoustic erythrocytometer for mechanical cell probing
- Author
-
Raymond Sparrow, Andreas Link, and Thomas Franke
- Subjects
medicine.anatomical_structure ,Materials science ,Acoustics and Ultrasonics ,Arts and Humanities (miscellaneous) ,Cell ,medicine ,Biomedical engineering - Published
- 2021
72. Author Correction: Metformin potentiates nephrotoxicity by promoting NETosis in response to renal ferroptosis
- Author
-
Zhaoxian Cai, Xiaotian Wu, Zijun Song, Shumin Sun, Yunxing Su, Tianyi Wang, Xihao Cheng, Yingying Yu, Chao Yu, En Chen, Wenteng Chen, Yongping Yu, Andreas Linkermann, Junxia Min, and Fudi Wang
- Subjects
Cytology ,QH573-671 - Published
- 2024
- Full Text
- View/download PDF
73. Arbeitsbuch Arzneistoffsynthese : Ein praxisorientierte Anleitung für Pharmazie- und Chemiestudierende
- Author
-
Andreas Link, Gregor Radau, Holger Stark, Markus Falkenstein, Andreas Link, Gregor Radau, Holger Stark, and Markus Falkenstein
- Subjects
- Pharmaceutical chemistry, Drugs--Design
- Abstract
Die ersten Schritte in den Praktika zur Synthese von biologisch aktiven Stoffen sind von zahlreichen Herausforderungen begleitet. Das Arbeitsbuch Arzneistoffsynthese enthält eine praxisorientierte Sammlung von Synthesevorschriften und bringt Einsteigern die unterschiedlichen Reaktionsmechanismen und Arbeitsschritte nahe. Es wurden nur solche Präparate aufgenommen, die mehrmals von Studierenden mit diesen Anweisungen unkompliziert nachvollzogen werden konnten. Fünfzehn konkrete'Kniffe & Tricks'sorgen zusätzlich für erfolgreiche Synthesen und höhere Ausbeuten. An Reaktionsmechanismen werden berücksichtigt: - Radikalische Substitution - Nukleophile Substitution am sp3-hybridisierten Atom - Addition an nichtaktivierte C-C-Mehrfachbindungen - Eliminierung unter Bildung von C-C-Mehrfachbindungen - Substitution am Aromaten - Reaktionen von Carbonylverbindungen - Reaktionen weitere heteroanaloger Verbindungen - Oxidationen und Reduktionen - Umlagerungsreaktionen - Umpolungsreaktionen - Sonstige Stoffumsetzungen Die Autoren haben langjährige Erfahrungen in der pharmazeutisch-chemischen Lehre und in der Praktikumsbetreuung Arzneistoffsynthese an den Universitäten Greifswald und Düsseldorf.
- Published
- 2021
74. Metformin potentiates nephrotoxicity by promoting NETosis in response to renal ferroptosis
- Author
-
Zhaoxian Cai, Xiaotian Wu, Zijun Song, Shumin Sun, Yunxing Su, Tianyi Wang, Xihao Cheng, Yingying Yu, Chao Yu, En Chen, Wenteng Chen, Yongping Yu, Andreas Linkermann, Junxia Min, and Fudi Wang
- Subjects
Cytology ,QH573-671 - Abstract
Abstract Given the rapidly aging population, aging-related diseases are becoming an excessive burden on the global healthcare system. Metformin has been shown to be beneficial to many age-related disorders, as well as increase lifespan in preclinical animal models. During the aging process, kidney function progressively declines. Currently, whether and how metformin protects the kidney remains unclear. In this study, among longevity drugs, including metformin, nicotinamide, resveratrol, rapamycin, and senolytics, we unexpectedly found that metformin, even at low doses, exacerbated experimentally-induced acute kidney injury (AKI) and increased mortality in mice. By single-cell transcriptomics analysis, we found that death of renal parenchymal cells together with an expansion of neutrophils occurs upon metformin treatment after AKI. We identified programmed cell death by ferroptosis in renal parenchymal cells and blocking ferroptosis, or depleting neutrophils protects against metformin-induced nephrotoxicity. Mechanistically, upon induction of AKI, ferroptosis in renal parenchymal cells initiates the migration of neutrophils to the site of injury via the surface receptor CXCR4–bound to metformin–iron–NGAL complex, which results in NETosis aggravated AKI. Finally, we demonstrated that reducing iron showed protective effects on kidney injury, which supports the notion that iron plays an important role in metformin-triggered AKI. Taken together, these findings delineate a novel mechanism underlying metformin-aggravated nephropathy and highlight the mechanistic relationship between iron, ferroptosis, and NETosis in the resulting AKI.
- Published
- 2023
- Full Text
- View/download PDF
75. Suppressed MMP-9 Activity in Myocardial Infarction-Related Cardiogenic Shock Implies Diminished Rage Degradation
- Author
-
Andreas Link, Andrey Kazakov, Simina-Ramona Selejan, Sebastian Ewen, M Hohl, Michael Böhm, Ingrid Kindermann, and Lisa Hewera
- Subjects
Male ,0301 basic medicine ,medicine.medical_specialty ,Receptor for Advanced Glycation End Products ,Myocardial Infarction ,Shock, Cardiogenic ,Inflammation ,030204 cardiovascular system & hematology ,Matrix metalloproteinase ,Critical Care and Intensive Care Medicine ,03 medical and health sciences ,0302 clinical medicine ,Western blot ,Glycation ,Internal medicine ,Humans ,Medicine ,Zymography ,cardiovascular diseases ,Myocardial infarction ,Receptor ,Aged ,Aged, 80 and over ,Tissue Inhibitor of Metalloproteinase-1 ,medicine.diagnostic_test ,business.industry ,Cardiogenic shock ,Middle Aged ,Flow Cytometry ,medicine.disease ,030104 developmental biology ,Endocrinology ,Matrix Metalloproteinase 9 ,Leukocytes, Mononuclear ,cardiovascular system ,Emergency Medicine ,Female ,medicine.symptom ,business - Abstract
BACKGROUND Receptor for advanced glycation end products (RAGE) and its cleavage fragment soluble RAGE (sRAGE) are opposite players in inflammation. Enhanced monocytic RAGE expression and decreased plasma sRAGE levels are associated with higher mortality in infarction-related cardiogenic shock. Active matrix metalloproteinase-9 (MMP-9) has been implied in RAGE ectodomain cleavage and subsequently sRAGE shedding in vitro. We investigated MMP-9 activity in myocardial infarction-induced cardiogenic shock with regard to RAGE/sRAGE regulation. METHODS AND RESULTS We determined MMP-9 serum activity by zymography and tissue inhibitor of matrix metalloproteinases (TIMP-1) expression by Western blot and correlated it to RAGE/sRAGE data in patients with cardiogenic shock after acute myocardial infarction (CS, n = 30), in patients with acute myocardial infarction without shock (AMI, n = 20) and in healthy volunteers (n = 20).MMP-9 activity is increased in AMI (P = 0.02 versus controls), but significantly decreased in CS with lowest levels in non-survivors (n = 13, P = 0.02 versus AMI). In all patients, MMP-9 activity correlated inversely with RAGE expression on circulating monocytes (r = -0.57; P = 0.0001; n = 50).TIMP-1 levels showed an inverse regulation in comparison to active MMP-9 with significantly decreased levels in AMI as compared with controls (P = 0.02 versus controls) and highest levels in non-survivors of CS (P
- Published
- 2017
76. Replica-Based Protein Structure Sampling Methods II: Advanced Hybrid Solvent TIGER2hs
- Author
-
Norman Geist, Walter Langel, Andreas Link, Martin Kulke, and Lukas Schulig
- Subjects
Protein Conformation, alpha-Helical ,Materials science ,Thermodynamic state ,Molecular Dynamics Simulation ,010402 general chemistry ,01 natural sciences ,Molecular dynamics ,symbols.namesake ,0103 physical sciences ,Materials Chemistry ,Statistical physics ,Amino Acid Sequence ,Physical and Theoretical Chemistry ,Quantitative Biology::Biomolecules ,010304 chemical physics ,Replica ,Temperature ,Sampling (statistics) ,Proteins ,0104 chemical sciences ,Surfaces, Coatings and Films ,Solvent ,Solvent models ,Phase space ,symbols ,Solvents ,Peptides ,Gibbs sampling - Abstract
In many cases, native states of proteins may be predicted with sufficient accuracy by molecular dynamics simulations (MDSs) with modern force fields. Enhanced sampling methods based on MDS are applied for exploring the phase space of a protein sequence and to overcome barriers on rough conformational energy landscapes. The minimum free energy state is obtained with sampling algorithms providing sufficient convergence and accuracy. A reliable but computationally very expensive method is replica exchange molecular dynamics, with many modifications to this approach presented in the past. Recently, we demonstrated how our temperature intervals with global exchange of replicas hybrid (TIGER2h) solvent sampling algorithm made a good compromise between efficiency and accuracy. There, all states are sampled under full explicit solvent conditions with a freely chosen number of replicas, whereas an implicit solvent is used during the swap decisions. This hybrid method yielded a much better approximation to the agreement with calculations in an explicit solvent than fully implicit solvent simulations. Here, we present an extension of TIGER2h and add a few layers of explicit water molecules around the peptide for the energy calculations, whereas the dynamics in fully explicit water is maintained. We claim that these water layers better reproduce steric effects, the polarization of the solvent, and the resulting reaction field energy than typical implicit solvent models. By investigating the protein-solvent interactions across comprehensive thermodynamic state ensembles, we found a strong conformational dependence of this reaction field energy. All simulations were performed with nanoscale molecular dynamics on two peptides, the α-helical peptide (AAQAA)3 and the β-hairpin peptide HP7. A production-ready TIGER2hs implementation is supplied, approaching the accuracy of full explicit solvent sampling at a fraction of computational resources.
- Published
- 2019
77. Azologization of a hetero-stilbene based c-RAF kinase inhibitor: Towards the design of photoswitchable sirtuin inhibitors
- Author
-
Sören Swyter, Nathalie Wössner, Enrico Tapavicza, Anja Bodtke, Manfred Jung, Robert K. Hofstetter, Adam C. Smith, Christoph W. Grathwol, and Andreas Link
- Subjects
biology ,Photoswitch ,Ligand ,Chemistry ,Kinase ,Sirtuin ,biology.protein ,Molecule ,Context (language use) ,c-Raf ,Isomerization ,Combinatorial chemistry - Abstract
The use of light as an external trigger to change ligand shape and as a result its bioactivity, allows the probing of pharmacologically relevant systems with spatiotemporal resolution. In this context, aromatic diazeno compounds are well suited for the design of photoswitchable ligands due to the long thermal relaxation half‐lives of the photoinduced Z configuration, and tunability of the absorption wavelength λ max. In search for sirtuin inhibitors, a hetero-stilbene lead resulting from the screening of a compound that was originally designed as kinase inhibitor, was remodelled to its diazeno analogue. By this azologization, the shape of the molecule was left unaltered whereas the photoswitching ability was improved. As anticipated, the highly analogous compound showed similar activity in its thermodynamically stable stretched-out E form. Irradiation of this isomer triggers isomerisation to the Z configuration with a bent geometry causing a considerably shorter end‐to‐end distance. The resulting affinity shifts are intended to enable real‐time photomodulation of sirtuins in vitro.
- Published
- 2019
78. Supercritical fluid chromatography
- Author
-
Andreas Link, Carolin Eckert, Mahmoud Hasan, and Robert K. Hofstetter
- Subjects
Computer science ,Singular form ,Principal (computer security) ,Supercritical fluid chromatography ,General Chemistry ,Biochemical engineering ,Biochemistry ,Method development ,Supercritical fluid - Abstract
High-pressure gas chromatography is not a novel concept, but it is an intriguing one: the eco-friendly chimera seeks to combine the advantages of GC and HPLC, which has led to the development of supercritical fluid chromatography (SFC). But while the chromatographic age of supercritical fluids has been advertised by proponents and manufacturers for more than 50 years, SFC has largely been deprecated as science fiction due to complex method development, a perceived lack of robustness, and a tendency to fall short of expectations. For the longest time, separation scientists were justifiably skeptical—if not blissfully unaware—of the reformation process taking place within SFC, which has only recently escaped scientific anonymity/infamy by gaining industrial significance as the method of choice for chiral and semi-preparative separations. Indeed, the truly exceptional performance and a multitude of adjustable parameters make SFC arguably the most versatile of industrially employed chromatographic techniques. Here, the principal reasons for the renewed interest in SFC (what is SFC good for?) are reviewed, before addressing the underlying physical principles and instrumental requirements (what makes SFC work?). A discussion of the fundamental limitations (what is the catch?) follows. The frontiers between different types of chromatography are fading and may soon give way to unified or convergent analysis that is expected to provide a more accurate analytical vision than any singular form of chromatography.
- Published
- 2019
79. Flupirtine and retigabine as templates for ligand-based drug design of K
- Author
-
Abdrrahman S, Surur, Christian, Bock, Kristin, Beirow, Konrad, Wurm, Lukas, Schulig, Markus K, Kindermann, Werner, Siegmund, Patrick J, Bednarski, and Andreas, Link
- Abstract
Drug induced liver injury (DILI) and tissue discoloration led to the recent discontinuation of the therapeutic use of the closely related drugs flupirtine and retigabine, respectively. Experience gained with these drugs strongly suggests that heterotetramer, voltage-gated potassium channels 2 and 3 (KV7.2/3) are valid targets for effective treatment of pain and epilepsy. Because the adverse effects are not related to the mechanism of action, it appears promising to investigate chemical modifications of these clinically validated, drug-like leads. In the present retro-metabolic drug design study, a series of 43 compounds were synthesized and characterized with regard to KV7.2/3 opening activity and efficacy. The most active compound 22d displays excellent potency (EC50 = 4 nM) and efficacy (154%) as a KV7.2/3 opener. Limited aqueous solubility hampered toxicity testing at concentrations higher than 63 μM, but this concentration was nontoxic to two hepatocellular cell lines (HEP-G2 and TAMH) in culture. The slightly less active but more soluble compound 25b (EC50 = 11 nM, efficacy 111%) showed an improved toxicity/activity ratio compared to flupirtine by three orders of magnitude and represents an attractive lead structure for the development of safer analgesics and antiepileptics.
- Published
- 2019
80. How to replace the lost keys? Strategies toward safer K
- Author
-
Christian, Bock and Andreas, Link
- Abstract
The highly structurally similar drugs flupirtine and retigabine have been regarded as safe and effective for many years but lately they turned out to exert intolerable side effects. While the twin molecules share the mode of action, both stabilize the open state of voltage-gated potassium channels, the form and severity of adverse effects is different. The analgesic flupirtine caused drug-induced liver injury in rare but fatal cases, whereas prolonged use of the antiepileptic retigabine led to blue tissue discoloration. Because the adverse effects seem unrelated to the mode of action, it is likely, that both drugs that occupied important therapeutic niches, could be replaced. Reasons for the clinically relevant toxicity will be clarified and future substitutes for these drugs presented in this review.
- Published
- 2019
81. Sulfide Analogues of Flupirtine and Retigabine with Nanomolar K
- Author
-
Christian, Bock, Abdrrahman S, Surur, Kristin, Beirow, Markus K, Kindermann, Lukas, Schulig, Anja, Bodtke, Patrick J, Bednarski, and Andreas, Link
- Subjects
HEK293 Cells ,Potassium Channels ,Aminopyridines ,Humans ,Carbamates ,Phenylenediamines ,Oxidation-Reduction - Abstract
The potassium channel openers flupirtine and retigabine have proven to be valuable analgesics or antiepileptics. Their recent withdrawal due to occasional hepatotoxicity and tissue discoloration, respectively, leaves a therapeutic niche unfilled. Metabolic oxidation of both drugs gives rise to the formation of electrophilic quinones. These elusive, highly reactive metabolites may induce liver injury in the case of flupirtine and blue tissue discoloration after prolonged intake of retigabine. We examined which structural features can be altered to avoid the detrimental oxidation of the aromatic ring and shift oxidation toward the formation of more benign metabolites. Structure-activity relationship studies were performed to evaluate the K
- Published
- 2019
82. Tetrahydroindoles as Multipurpose Screening Compounds and Novel Sirtuin Inhibitors
- Author
-
Norman Geist, Dennis Schade, Steffen Vojacek, Walter Langel, Lukas Schulig, Andreas Link, Nathalie Wössner, and Manfred Jung
- Subjects
Indoles ,01 natural sciences ,Biochemistry ,Acylation ,Inhibitory Concentration 50 ,Structure-Activity Relationship ,Sirtuin 2 ,Sirtuin 1 ,Catalytic Domain ,Sirtuin 3 ,Drug Discovery ,Bioorganic chemistry ,Humans ,General Pharmacology, Toxicology and Pharmaceutics ,Pharmacology ,chemistry.chemical_classification ,Indole test ,Binding Sites ,biology ,010405 organic chemistry ,Drug discovery ,Organic Chemistry ,Combinatorial chemistry ,Chemical space ,0104 chemical sciences ,Histone Deacetylase Inhibitors ,Molecular Docking Simulation ,010404 medicinal & biomolecular chemistry ,Enzyme ,chemistry ,Sirtuin ,biology.protein ,Molecular Medicine - Abstract
Indoles are privileged structures in medicinal and bioorganic chemistry that are particularly well suited to serve as platforms for diversity. Among many other therapeutic areas, the indole scaffold has been used to design aromatic compounds useful to interfere with enzymes engaged in the regulation of substrate acylation status, such as sirtuins. However, the planarity of the indole ring is not necessarily optimal for all target enzymes, especially when functionalization with aromatic side chains is required. Replacement of flat scaffolds by nonplanar molecular cores dominated by sp3 hybridization is a common strategy to avoid the disadvantages associated with poor solubility and high promiscuity, while covering less-well-explored areas of chemical space. Thus, we synthesized fragment-like tetrahydroindoles suitable for fragment-based drug discovery as well as a well-characterized small library intended as multipurpose screening compounds. For proof of principle, these compounds were screened against sirtuins 1-3, enzymes known to be addressable by indoles. We found that 2,6,6-trimethyl-4-oxo-4,5,6,7-tetrahydro-1H-indole-3-carboxamides are potent and selective SIRT2 inhibitors. Compound 16 t displayed an IC50 value of 0.98 μm and could serve as exquisite starting point for hit-to-lead profiling.
- Published
- 2019
83. High-Throughput Triggered Merging of Surfactant-Stabilized Droplet Pairs Using Traveling Surface Acoustic Waves
- Author
-
John C. McGrath, Vincent Bussiere, Thomas Franke, Aurélie Vigne, Aparna Srivastav, Andreas Link, Jean-Christophe Baret, Centre de Recherche Paul Pascal (CRPP), Université de Bordeaux (UB)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), Laboratoire Interdisciplinaire de Physique [Saint Martin d’Hères] (LIPhy), and Centre National de la Recherche Scientifique (CNRS)-Université Grenoble Alpes [2016-2019] (UGA [2016-2019])
- Subjects
[PHYS]Physics [physics] ,[SPI.ACOU]Engineering Sciences [physics]/Acoustics [physics.class-ph] ,Chemistry ,Acoustics ,010401 analytical chemistry ,Surface acoustic wave ,Microfluidics ,Acoustic wave ,010402 general chemistry ,Sound power ,01 natural sciences ,0104 chemical sciences ,Analytical Chemistry ,Pulse (physics) ,Physics::Fluid Dynamics ,[SPI]Engineering Sciences [physics] ,Acoustic streaming ,Amplitude ,[PHYS.COND]Physics [physics]/Condensed Matter [cond-mat] ,Sound pressure ,ComputingMilieux_MISCELLANEOUS - Abstract
We present an acoustofluidic device for fluorescently triggered merging of surfactant-stabilized picoliter droplet pairs at high throughput. Droplets that exceed a preset fluorescence threshold level are selectively merged by a traveling surface acoustic wave (T-SAW) pulse. We characterize the operation of our device by analyzing the merging efficiency as a function of acoustic pulse position, duration, and acoustic pressure amplitude. We probe droplet merging at different droplet rates and find that efficient merging occurs above a critical acoustic power level. Our results indicate that the efficiency of acoustically induced merging of surfactant stabilized droplets is correlated with acoustic streaming velocity. Finally, we discuss how both time-averaged and instantaneous acoustic pressure fields can affect the integrity of surfactant layers. Our technique, by allowing the merging of up to 105 droplets per hour, shows great potential for integration into microfluidic systems for high-throughput and high-content screening applications.
- Published
- 2019
- Full Text
- View/download PDF
84. Gibt es in der Industrie in 20 Jahren noch Verbrennungsmotoren?
- Author
-
Andreas Link and Rudolf Ellensohn
- Abstract
Die oben gezeigten Arbeitsmaschinen und Industrieanwendungen mit mehr als 76 kW, werden heute vorwiegend durch Dieselmotoren bestritten. Ein kleiner Teil verwendet Gasmotoren mit LPG oder CNG. Weniger als 0,5 % bei mobilen Arbeitsmaschinen verwenden elektrische Antriebe.
- Published
- 2019
85. Unveiling the N-Terminal Homodimerization of BCL11B by Hybrid Solvent Replica-Exchange Simulations
- Author
-
Christian Schmidt, Norman Geist, Mihaela Delcea, Lukas Schulig, Martin Delin, Andreas Link, Hannes Forkel, Piotr Grabarczyk, and Martin Kulke
- Subjects
0301 basic medicine ,Cell signaling ,BCL11B ,Computational biology ,Molecular Dynamics Simulation ,protein-protein docking ,01 natural sciences ,Article ,Catalysis ,lcsh:Chemistry ,Inorganic Chemistry ,03 medical and health sciences ,TIGER2hs ,TIGER2h ,Transcription (biology) ,protein folding ,0103 physical sciences ,Fluorescence Resonance Energy Transfer ,Humans ,Amino Acid Sequence ,Physical and Theoretical Chemistry ,lcsh:QH301-705.5 ,Molecular Biology ,Transcription factor ,Spectroscopy ,homodimerization ,Zinc finger ,CCHC Zinc Finger ,010304 chemical physics ,Chemistry ,Tumor Suppressor Proteins ,Organic Chemistry ,Rational design ,Zinc Fingers ,General Medicine ,replica-exchange molecular dynamics ,Computer Science Applications ,DNA-Binding Proteins ,Repressor Proteins ,HEK293 Cells ,030104 developmental biology ,Förster resonance energy transfer ,lcsh:Biology (General) ,lcsh:QD1-999 ,Protein folding ,Dimerization ,Transcription Factors - Abstract
Transcription factors play a crucial role in regulating biological processes such as cell growth, differentiation, organ development and cellular signaling. Within this group, proteins equipped with zinc finger motifs (ZFs) represent the largest family of sequence-specific DNA-binding transcription regulators. Numerous studies have proven the fundamental role of BCL11B for a variety of tissues and organs such as central nervous system, T cells, skin, teeth, and mammary glands. In a previous work we identified a novel atypical zinc finger domain (CCHC-ZF) which serves as a dimerization interface of BCL11B. This domain and formation of the dimer were shown to be critically important for efficient regulation of the BCL11B target genes and could therefore represent a promising target for novel drug therapies. Here, we report the structural basis for BCL11B–BCL11B interaction mediated by the N-terminal ZF domain. By combining structure prediction algorithms, enhanced sampling molecular dynamics and fluorescence resonance energy transfer (FRET) approaches, we identified amino acid residues indispensable for the formation of the single ZF domain and directly involved in forming the dimer interface. These findings not only provide deep insight into how BCL11B acquires its active structure but also represent an important step towards rational design or selection of potential inhibitors.
- Published
- 2021
86. Cholesterol business: life or death by rust
- Author
-
Shubhangi Gavali, Francesca Maremonti, and Andreas Linkermann
- Subjects
Medicine ,Biology (General) ,QH301-705.5 - Published
- 2024
- Full Text
- View/download PDF
87. Akutes Leberversagen nach Einnahme von Ciprofloxacin
- Author
-
Frank Lammert, Andreas Link, Dominic Kaddu-Mulindwa, and Alexander Maßmann
- Subjects
Gynecology ,medicine.medical_specialty ,business.industry ,medicine ,Liver failure ,General Medicine ,business - Abstract
Anamnese und klinischer Befund: Eine 23-jahrige Patientin wird mit dem Verdacht auf ein akutes Leberversagen in ein Krankenhaus der tertiaren Versorgung verlegt. Vorausgegangen war die Einnahme von Ciprofloxacin (2 × 500 mg / Tag) uber zwei Tage aufgrund von unspezifischen Allgemeinsymptome (Ubelkeit und Erbrechen). Die Beschwerden bestanden bereits seit einer Woche. Anfangs ist die Patientin neurologisch unauffallig, dann vermindert sich die Vigilanz im Verlauf bis hin zum Sopor. Bis auf eine Appendektomie im Jugendalter sind keine Vorerkrankungen bekannt. Untersuchungen: Die initiale korperliche und klinisch-neurologische Untersuchung ergibt keine auffalligen Befunde, auser einem Sklerenikterus und diskreten rechtsseitigen Oberbauchschmerzen. Laborchemisch zeigen sich deutlich angestiegene Transaminasen sowie eine Hyperammonamie und -bilirubinamie. Das toxikologische Screening ist unauffallig. Therapie und Verlauf: Es wird die Diagnose eines akuten, moglicherweise medikamentos induzierten, Leberversagens gestellt. Sofort wird eine Ammoniakdetoxifikation mit Laktulose eingeleitet. Die transjugulare Leberbiopsie ergibt eine ausgepragte, mit erheblichen Zytolysen einhergehende lobulare Hepatitis. Bei progredienter Vigilanzminderung wird eine Hirnodemtherapie mittels Glycerin und Mannitol eingeleitet. Hierunter steigt die Serumosmolaritat, der Ammoniakspiegel sinkt und die Patientin bessert sich neurologisch. Im Verlauf kommt es innerhalb von 48 Stunden zur vollstandigen klinischen Rekonstitution und die Lebersyntheseleistung bessert sich. Folgerung: Nachdem haufige Ursachen ausgeschlossen wurden, sollte bei einem akuten Leberversagen auch an eine Fluorchinolon-induzierte Leberschadigung gedacht und eine exakte Medikamentenanamnese erhoben werden.
- Published
- 2016
88. Correction to: Off‑the‑shelf barrier for emergency intubation in the cardiac catheterization laboratory during the coronavirus disease 2019 (COVID‑19) pandemic
- Author
-
Bruno Scheller, Davor Vukadinović, Andreas Link, Sebastian Ewen, and Felix Mahfoud
- Subjects
medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,business.industry ,medicine.medical_treatment ,General Medicine ,GeneralLiterature_MISCELLANEOUS ,Clinical research ,Internal medicine ,Pandemic ,medicine ,Cardiology ,Intubation ,Off the shelf ,Cardiology and Cardiovascular Medicine ,business ,GeneralLiterature_REFERENCE(e.g.,dictionaries,encyclopedias,glossaries) ,Cardiac catheterization - Abstract
During submission the author name Andreas Link was unfortunately omitted. The correct author list reads as follows.
- Published
- 2020
89. Synthesis and potassium K
- Author
-
Christian, Bock, Kristin, Beirow, Abdrrahman S, Surur, Lukas, Schulig, Anja, Bodtke, Patrick J, Bednarski, and Andreas, Link
- Abstract
Flupirtine, an opener of neuronal voltage gated potassium channels (KV7.2/3), has been used as a therapeutic alternative for pain treatment in patients refractory to NSAIDs and opioids. Because flupirtine is associated with rare but fatal drug-induced liver injury that may result from the formation of toxic metabolites upon metabolic oxidation, we synthesized novel derivatives with the goal of identifying equally active and ultimately safer KV7.2/3 channel openers. Four thioether analogues were designed to lack a nitrogen atom that would be a prerequisite for the formation of toxic para-quinone diimines, and form sulfoxide and sulfone metabolites instead. KV7.2/3 channel opening activity and hepatotoxicity data of twelve novel flupirtine analogues, four thioethers and their respective sulfoxide and sulfone metabolites are reported.
- Published
- 2018
90. Itaconic acid indicates cellular but not systemic immune system activation
- Author
-
Karsten Hiller, Henning Madry, Christian Jaeger, Andreas Link, Philipp M. Lepper, Johannes Meiser, Lisa Kraemer, Jochen G. Schneider, and HZI,Helmholtz-Zentrum für Infektionsforschung GmbH, Inhoffenstr. 7,38124 Braunschweig, Germany.
- Subjects
0301 basic medicine ,Immunology ,Inflammation ,Pharmacology ,Biochemistry, biophysics & molecular biology [F05] [Life sciences] ,Sepsis ,sepsis ,03 medical and health sciences ,chemistry.chemical_compound ,Paracrine signalling ,Immune system ,medicine ,Itaconic acid ,Biochimie, biophysique & biologie moléculaire [F05] [Sciences du vivant] ,biology ,Succinate dehydrogenase ,Research Paper: Immunology ,Metabolism ,itaconic acid ,medicine.disease ,In vitro ,030104 developmental biology ,Oncology ,chemistry ,inflammation ,biology.protein ,biomarker ,medicine.symptom ,metabolism - Abstract
Itaconic acid is produced by mammalian leukocytes upon pro-inflammatory activation. It appears to inhibit bacterial growth and to rewire the metabolism of the host cell by inhibiting succinate dehydrogenase. Yet, it is unknown whether itaconic acid acts only intracellularly, locally in a paracrine fashion, or whether it is even secreted from the inflammatory cells at meaningful levels in peripheral blood of patients with severe inflammation or sepsis. The aim of this study was to determine the release rate of itaconic acid from pro-inflammatory activated macrophages in vitro and to test for the abundance of itaconic acid in bodyfluids of patients suffering from acute inflammation. We demonstrate that excretion of itaconic acid happens at a low rate and that it cannot be detected in significant amounts in plasma or urine of septic patients or in liquid from bronchial lavage of patients with pulmonary inflammation. We conclude that itaconic acid may serve as a pro-inflammatory marker in immune cells but that it does not qualify as a biomarker in the tested body fluids.
- Published
- 2018
91. Use the Force Picker, Luke
- Author
-
Andreas Link, Jan Borchers, Simon Voelker, and Christian Corsten
- Subjects
Task (computing) ,Computer science ,05 social sciences ,Real-time computing ,0202 electrical engineering, electronic engineering, information engineering ,Range (statistics) ,Value (computer science) ,Table (database) ,020207 software engineering ,0501 psychology and cognitive sciences ,02 engineering and technology ,Space (commercial competition) ,050107 human factors - Abstract
Picking values from long ordered lists, such as when setting a date or time, is a common task on smartphones. However, the system pickers and tables used for this require significant screen space for spinning and dragging, covering other information or pushing it off-screen. The Force Picker reduces this footprint by letting users increase and decrease values over a wide range using force touch for rate-based control. However, changing input direction this way is difficult. We propose three techniques to address this. With our best candidate, Thumb-Roll, the Force Picker lets untrained users achieve similar accuracy as a standard picker, albeit less quickly. Shrinking it to a single table row, 20% of the iOS picker height, slightly affects completion time, but not accuracy. Intriguingly, after 70 minutes of training, users were significantly faster with this minimized Thumb-Roll Picker compared to the standard picker, at the same accuracy and only 6% of the gesture footprint. We close with application examples.
- Published
- 2018
92. Natalizumab treatment shows low cumulative probabilities of confirmed disability worsening to EDSS milestones in the long-term setting
- Author
-
Maria Trojano, Helmut Butzkueven, Ludwig Kappos, Heinz Wiendl, Tim Spelman, Fabio Pellegrini, Yi Chen, Qunming Dong, Harold Koendgen, Shibeshih Belachew, Jorge Correale, Alejandro Caride, Norma H. Deri, Carlos Ballario, Simon Broadley, Chris Kneebone, Michael Barnett, John Pollard, Suzanne Hodgkinson, Allan Kermode, Richard Macdonell, John King, Jeannette Lechner-Scott, Noel Saines, Mark Slee, Chris Plummer, Barbara Willekens, Ludo Vanopdenbosch, Rémy Phan-Ba, Valérie Delvaux, Veronique Bissay, Jan Debruyne, Danny Decoo, Roeland Crols, Anoek Symons, Guy Nagels, Vincent Van Pesch, Christian Sindic, Benedicte Dubois, Robert Medaer, Marie D'Hooghe, Daniel Guillaume, Eric De Smet, Pierrette Seeldrayers, Andreas Lysandropoulos, Mathieu Vokaer, Karine Geens, Christina Willems, Pierre Denayer, Michel Bureau, Cecile Retif, Michel Dupuis, Olivier Bouquiaux, Patrick Vanderdonckt, William van Landegem, Jo Caekebeke, Erwin Van Ingelghem, Katelijne Peeters, Pascale Gerard, Alain Maertens de Noordhout, Philippe Desfontaines, Etienne Urbain, Inge Declercq, Bart Van Wijmeersch, Erwin Vanroose, Alain Wibail, Emmanuel Barthomolé, Melanie Ursell, Margaret Elizabeth Sweet, David Howse, Draga Jichici, Melad Shawush, Mike Namaka, Anthony Traboulsee, Stan Hashimoto, Raymond Lo, Paul Marchetti, Yves Lapierre, Francois Jacques, Gregg MacLean, Virender Bhan, Pierre Duquette, Bradley Stewart, John Paulseth, Marcelo Kremenchutzky, Galina Vorobeychik, Paul O'Connor, François Grand'Maison, Eva Havrdova, Eva Meluzinová, Martin Valis, Radomír Talab, Pavel Stourac, Olga Zapletalová, Michal Dufek, Vladimíra Sládková, Alena Novotna, Romana Vancurová, Libuse Lhotaková, Jiri Fiedler, Marta Vachova, David Dolezil, Ivana Stetkarova, Adela Rehankova, Petr Psenica, Veronika Ulehlova, Sona Feketova, Ondrej Skoda, Markus Färkkilä, Sarasoja Taneli, Keijo Koivisto, Juha Matti Seppä, Laura Airas, Irina Elovaara, Päivi Hartikainen, Tuula Pirttila, Pierre Louchart, Olivier Ille, Jean philippe Thenint, Etienne Godet, Marcel Maillet Vioud, Renato Colamarino, Michel Gugenheim, Jerome Grimaud, Audrey Kopf, Christophe Billy, Bernard Huttin, Jean paul Borsotti, Philippe Devos, Jean bertin N Kendjuo, Albert Verier, Stephane Chapuis, Nathalie Daluzeau, Gilles Angibaud, Marie-Sylvie Artaud Uriot, François Ziegler, François Sellal, Antoine Moulignier, Isabelle Lavenu, Samir Ismail, Richard Devy, Manuel Suceveanu, Marc Wagner, Sebastien Marcel, Faycal Derouiche, Sohrab Mostoufizadehghalamfarsa, Sophie Delalande, Irene Ruggieri, Catherine Bossu Van Nieuwenhuyse, Chantal Nifle, Basile Ondze, Carmen Gurau Vasilescu, Cyrille Vongsouthi, Marc Coustans, Olivier Anne, Josephine Amevigbe, Jerome Servan, Marc Merienne, Philippe Eck, Stephane Berroir, Philippe Busson, Bruno Barroso, Jean-Marc Larrieu, Catherine Louvet Giendaj, Imad Malkoun, Patrick Hautecoeur, Arnaud Kwiatkowski, Andre Pouliquen, Guillaume Garrigues, Olivier Delerue, Pierric Giraud, Julien Gere, Jean Vaunaize, Olivier Dereeper, Nicolas Seiller, Roger Alsassa, Mihaela Vlaicu, Veronique Neuville, Jean Marc Faucheux, Patricia Bernady, Guy Fanjaud, François Viallet, Michael Schroeter, Sylke Schlemilch-Paschen, Thomas Lange, Kin-Arno Bohr, Klaus Jendroska, Elisabeth Rehkopf, Arnfin Bergmann, Christoph Kleinschnitz, Thomas Postert, Peter Scholz, Uwe Mauz, Hubert Stratmann, Veneta Siefjediers, Martin Prantl, Klaus Gehring, Ruth Zellner, Kathrin Junge, Anton Zellner, Valerina Bacay, Eugen Schlegel, Udo Polzer, Erik Strauss, Andreas Link, Christoph Stenzel, Matthias Freidel, Joachim Drews, Christian Neudert, Frank Schmitz, Joachim Jaeger, Said Masri, Wolfgang Heuberger, Beate Trausch, Oliver Ruhnke, Serena Scarel, Kathlen Bach, Michael Ernst, Harald Landefeld, Nils Richter, Stephan Schmidt, Michaela Krause, Alezander Dressel, Roland Ruth, Kerstin Anvari, Jens Gossling, Christoph Schenk, Oliver Tiedge, Lutz Bode, Hans-Thomas Eder, Oliver Pfeffer, Reinhard Krug, Christoph Lassek, Eberhard Fleischer, Sven Meuth, Luisa Hildegard Klotz, Ines Peglau, Borries Kukowski, Birgit Herting, Kersten Guthke, Jurgen Schierenbeck, Bernd Brockmeier, Holger Albrecht, Matthias Wuttke, Regine Augspach-Hofmann, Stefan Gunther, Martin Redbrake, Christian Franke, Klaus Buchner, Thomas Gratz, Rolf Horn, Frank Doemges, Martin Schreiber, Thomas Brosch, Markus Horn, Matthias Kittlitz, Gabriele Vulturius, Paul Hinse, Rolf Malessa, Stephan Wiehler, Zaza Katsarava, Oliver Kastrup, Ulrich Kausch, Martin Gullekes, Markus Fickinger, Wilhelm Wenzel, Ingolf C. Botefur, Gerd Reifschneider, Sebastian Rauer, Michael Lang, Lutz Harms, Ulrich Eckhardt, Simone Cursiefen, Ralf Linker, Klemens Angstwurm, Judith Haas, Ivo Schuetze, Eva Rohm, H. Stienker-Fisse, Michael Sailer, Johannes Bohringer, Mathias Maurer, Eberhard Bause, Ronald Wersching, Reinhardt Dachsel, Sylke Domke, Frank Hoffman, Bjorn Tackenberg, Kerstin Roch, Uwe Ziebold, Boris Kallmann, Bernhard Buehler, Judith Faiss, Juergen Faiss, Sebastian Schimrigk, Christian Menges, Karl Christian Knop, Wolfgang Koehler, Arno Siever, Johannes Bufler, Georg Gramsl, Benedicta Kuhnler, Matthias Maschke, Florian Stogbauer, Lisa Staude, Florian Bethke, Andreas Bitsch, Arndt D. Harmjanz, Jorg Windsheimer, Bernd C. Kieseier, Ralf Berkenfeld, Hayrettin Tumani, Michael Kirsch, Brigitte Wildemann, Regina Daniels, Klaus Gottwald, Wolfgang-Gerhard Elias, Olaf Hoffmann, Matthias Schwab, Christopher Pilz, Fabian Klostermann, Kerstin Hellwig, Achim Berthele, Antonios Bayas, Daniel Molitor, Christoph Grothe, Bert Wagner, Klimentini Karageorgiou, Dimosthenis Mitsikostas, Antonios Kodounis, Andreas Plaitakis, Alexandros Papadimitriou, Nikolaos Grigoriadis, Nikolaos Vlaikidis, Evaggelos Koutlas, Athanassios Kyritsis, Panagiotis Papathanassopoulos, Nikolaos Makris, Antonios Tavernarakis, Elio Scarpini, Enrico Montanari, Maria Giovanna Marrosu, Maria Pia Amato, Mariarosa Rottoli, Alessandra Lugaresi, Ciro Florio, Claudio Gasperini, Luigi Grimaldi, Enrico Millefiorini, Tatiana Koudriavtseva, Franco Perla, Renato Mantegazza, Antonio Bertolotto, Angelo Ghezzi, Sandra Quinones Aguilar, Eli Skromne Eisenberg, Leondardo Llamas Lopez, Rocio Marquez Estudillo, H.M. Schrijver, M.C. Wittebol, J.C. Baart, A.E.L. van Golde, G.J.D. Hengstman, P.H.M. Pop, M. Bos (Geldrop), R. Medaer, Angelique Schyns-Soeterboek, A. van der Zwart, A.J.H. van Diepen, G.A.M. Verheul, W.I.M. Verhagen, M. Bos (Helmond), R.J.G.M. Witjes, L.G.F. Sinnige, E.Th.L. van Munster, E.A.C.M. Sanders, Ron van Dijl, R.M.M. Hupperts, S.T.F.M. Frequin, L.H. Visser, J.M.L. Henselmans, J.W.B. Moll, Rune Midgard, Kjell Morten Myhr, Astrid Edland, Wenche Telstad, Tone Hognestad, Christian Lund, Harald Hovdal, Kaur Kamaljit, Jan Schepel, Roelfien Ida Hogenesch, Stephan Schüler, Francis Odeh, Karl B. Alstadhaug, Olav Korsgaard, Elisabeth Farbu, Teis Barclay Ingvaldsen, Diana Soares (SCO), José Rente, José Manuel Costa Guerra, Armando Morganho, António Leitão, João de Sá, Maria José Sá, Pinto Marques, Mário Veloso, Miguel Viana Baptista, Jarmila Szilasiová, Daniela Copikova-Cudrakova, Lubica Prochazkova, Eleonóra Klimová, Vladimir Donath, Miroslav Brozman, Cristina Ramo, Domingo Pérez Ruiz, Carmen Calles Hernández, María Eugenia Marzo Sola, Roberto Suarez Moro, Jose Antonio Vidal, Ana Belén Caminero Rodríguez, Gisela Martin Ozaeta, Jordi Batlle Nadal, Amaya Alvarez de Arcaya Esquide, Javier Olascoaga Urtaza, Sergio Martínez-Yélamos, Txomin Arbizu, Lluis Ramio i Torrenta, Mike Boggild, Martin Wilson, Adnan Al-Araji, Richard Nicholas, Timothy Harrower, Ian Redmond, Tilo Wolf, Michael Osei-Bonsu, Gordon Mazibrada, David Rog, David Cottrell, Cris Constantinescu, Orla Gray, Mohamed Belhag, Abdullah Shehu, Waqar Rashid, Martin Duddy, UCL - SSS/IONS - Institute of NeuroScience, UCL - SSS/IONS/CEMO - Pôle Cellulaire et moléculaire, Clinical sciences, Neurology, and UCL - (SLuc) Service de neurologie
- Subjects
Adult ,Male ,medicine.medical_specialty ,Disability worsening ,03 medical and health sciences ,Disability Evaluation ,0302 clinical medicine ,Natalizumab ,Multiple Sclerosis, Relapsing-Remitting ,immune system diseases ,Internal medicine ,Medicine ,Humans ,Immunologic Factors ,In patient ,Disability progression ,030212 general & internal medicine ,Prospective Studies ,Prospective cohort study ,Medicine(all) ,Natalizumab/therapeutic use ,Expanded Disability Status Scale ,business.industry ,Multiple sclerosis ,General Medicine ,Multiple Sclerosis, Relapsing-Remitting/drug therapy ,medicine.disease ,Immunologic Factors/therapeutic use ,Clinical Practice ,Treatment Outcome ,Neurology ,Disease Progression ,Observational study ,Female ,Relapsing-remitting multiple sclerosis ,Neurology (clinical) ,business ,EDSS milestones ,030217 neurology & neurosurgery ,medicine.drug ,Follow-Up Studies - Abstract
Background Though the Expanded Disability Status Scale (EDSS) is commonly used to assess disability level in relapsing-remitting multiple sclerosis (RRMS), the criteria defining disability progression are used for patients with a wide range of baseline levels of disability in relatively short-term trials. As a result, not all EDSS changes carry the same weight in terms of future disability, and treatment benefits such as decreased risk of reaching particular disability milestones may not be reliably captured. The objectives of this analysis are to assess the probability of confirmed disability worsening to specific EDSS milestones (i.e., EDSS scores ≥3.0, ≥4.0, or ≥6.0) at 288 weeks in the Tysabri Observational Program (TOP) and to examine the impact of relapses occurring during natalizumab therapy in TOP patients who had received natalizumab for ≥24 months. Methods TOP is an ongoing, open-label, observational, prospective study of patients with RRMS in clinical practice. Enrolled patients were naive to natalizumab at treatment initiation or had received ≤3 doses at the time of enrollment. Intravenous natalizumab (300 mg) infusions were given every 4 weeks, and the EDSS was assessed at baseline and every 24 weeks during treatment. Results Of the 4161 patients enrolled in TOP with follow-up of at least 24 months, 3253 patients with available baseline EDSS scores had continued natalizumab treatment and 908 had discontinued (5.4% due to a reported lack of efficacy and 16.4% for other reasons) at the 24-month time point. Those who discontinued due to lack of efficacy had higher baseline EDSS scores (median 4.5 vs. 3.5), higher on-treatment relapse rates (0.82 vs. 0.23), and higher cumulative probabilities of EDSS worsening (16% vs. 9%) at 24 months than those completing therapy. Among 24-month completers, after approximately 5.5 years of natalizumab treatment, the cumulative probabilities of confirmed EDSS worsening by 1.0 and 2.0 points were 18.5% and 7.9%, respectively (24-week confirmation), and 13.5% and 5.3%, respectively (48-week confirmation). The risks of 24- and 48-week confirmed EDSS worsening were significantly higher in patients with on-treatment relapses than in those without relapses. An analysis of time to specific EDSS milestones showed that the probabilities of 48-week confirmed transition from EDSS scores of 0.0–2.0 to ≥3.0, 2.0–3.0 to ≥4.0, and 4.0–5.0 to ≥6.0 at week 288 in TOP were 11.1%, 11.8%, and 9.5%, respectively, with lower probabilities observed among patients without on-treatment relapses (8.1%, 8.4%, and 5.7%, respectively). Conclusions In TOP patients with a median (range) baseline EDSS score of 3.5 (0.0–9.5) who completed 24 months of natalizumab treatment, the rate of 48-week confirmed disability worsening events was below 15%; after approximately 5.5 years of natalizumab treatment, 86.5% and 94.7% of patients did not have EDSS score increases of ≥1.0 or ≥2.0 points, respectively. The presence of relapses was associated with higher rates of overall disability worsening. These results were confirmed by assessing transition to EDSS milestones. Lower rates of overall 48-week confirmed EDSS worsening and of transitioning from EDSS score 4.0–5.0 to ≥6.0 in the absence of relapses suggest that relapses remain a significant driver of disability worsening and that on-treatment relapses in natalizumab-treated patients are of prognostic importance.
- Published
- 2018
93. Akute Herzinsuffizienz
- Author
-
Andreas Link and Michael Böhm
- Published
- 2018
94. Tetrazolylhydrazides as Selective Fragment-Like Inhibitors of the JumonjiC-Domain-Containing Histone Demethylase KDM4A
- Author
-
Martin Roatsch, Nicole Rüger, Manfred Jung, Roland Schüle, Henriette Franz, Thomas Emmrich, and Andreas Link
- Subjects
Jumonji Domain-Containing Histone Demethylases ,Tetrazoles ,Biochemistry ,Structure-Activity Relationship ,Drug Discovery ,Gene expression ,Humans ,Epigenetics ,Enzyme Inhibitors ,General Pharmacology, Toxicology and Pharmaceutics ,Formaldehyde dehydrogenase ,Pharmacology ,chemistry.chemical_classification ,Dose-Response Relationship, Drug ,Molecular Structure ,Molecular mass ,biology ,Chemistry ,Organic Chemistry ,Hydrazines ,Histone ,Enzyme ,biology.protein ,Molecular Medicine ,Demethylase ,JARID1B - Abstract
The JumonjiC-domain-containing histone demethylase 2A (JMJD2A, KDM4A) is a key player in the epigenetic regulation of gene expression. Previous publications have shown that both elevated and lowered enzyme levels are associated with certain types of cancer, and therefore the definite role of KDM4A in oncogenesis remains elusive. To identify a novel molecular starting point with favorable physicochemical properties for the investigation of the physiological role of KDM4A, we screened a number of molecules bearing an iron-chelating moiety by using two independent assays. In this way, we were able to identify 2-(1H-tetrazol-5-yl)acetohydrazide as a novel fragment-like lead structure with low relative molecular mass (Mr =142 Da), low complexity, and an IC50 value of 46.6 μm in a formaldehyde dehydrogenase (FDH)-coupled assay and 2.4 μm in an antibody-based assay. Despite its small size, relative selectivity against two other demethylases could be demonstrated for this compound. This is the first example of a tetrazole group as a warhead in JMJD demethylases.
- Published
- 2015
95. Angiopoietin-2 in acute myocardial infarction complicated by cardiogenic shock-a biomarker substudy of the IABP-SHOCK II-Trial
- Author
-
Holger Thiele, Michael Böhm, Gerhard Schuler, Suzanne de Waha, Andreas Link, Ingo Eitel, Janine Pöss, Volker Adams, Steffen Desch, Daniel Denks, and Georg Fuernau
- Subjects
medicine.medical_specialty ,business.industry ,Cardiogenic shock ,Hazard ratio ,Acute kidney injury ,medicine.disease ,Confidence interval ,Surgery ,Internal medicine ,Heart failure ,Shock (circulatory) ,medicine ,Cardiology ,Myocardial infarction ,medicine.symptom ,Cardiology and Cardiovascular Medicine ,business ,Blood sampling - Abstract
Aims Angiopoietin-2 (Ang-2) is a mediator of capillary leakage, and increased Ang-2 levels were associated with poor in-hospital outcome in a pilot study in cardiogenic shock (CS). In this larger study, we followed this hypothesis and aimed at assessing the predictive role of Ang-2 on short- and long-term mortality, investigating the effect of intra-aortic balloon pump (IABP) treatment on Ang-2 levels, and identifying clinical and procedural predictors of increased Ang-2. Methods and results In the IABP-SHOCK II-trial, 600 patients with CS complicating acute myocardial infarction were assigned to therapy with or without IABP. This substudy included 189 randomized patients with serial blood sampling performed at days 1, 2, and 3. No significant differences in Ang-2 levels were found between patients with or without IABP. The Ang-2 levels above the median at day 1 were associated with 30-day [hazard ratio (HR) 1.98, 95% confidence interval (CI) 1.26–3.10, P = 0.002) and 1-year mortality (HR 2.21, 95% CI 1.49–3.27, P < 0.001). Stratification of patients according to Ang-2 levels at day 3 increased these associations (30 days HR 5.15, 95% CI 2.80–9.45, P < 0.001; 1 year HR 5.24, 95% CI 3.19–8.58, P < 0.001). The Ang-2 concentrations were independent predictors for mortality in multivariate analysis (30 days HR 4.82, 95% CI 1.52–15.23, P = 0.007; 1 year HR 2.01, 95%CI 1.24–3.24, P = 0.005). Predictors of increased Ang-2 levels at day 3 were baseline Ang-2, development of acute kidney injury, bleeding events or transfusion, and impaired reperfusion. Conclusion In CS, high levels of Ang-2 are independently associated with poor short- and long-term outcome and associated with the reperfusion success as well as complications. Clinical Trial Registration URL: www.clinicaltrials.gov; unique identifier: NCT00491036
- Published
- 2015
96. Golden Age for Filter Design: Innovative and Proven Approaches for Acoustic Filter, Duplexer, and Multiplexer Design
- Author
-
Andreas Link and Phil Warder
- Subjects
Engineering ,Radiation ,business.industry ,Condensed Matter Physics ,Application software ,computer.software_genre ,Multiplexer ,Filter design ,Duplexer ,Mobile phone ,Filter (video) ,Cellular network ,Mobile telephony ,Electrical and Electronic Engineering ,business ,Telecommunications ,computer - Abstract
Mobile communication is already an integral part of our lives, and its role will only continue to grow. While early mobile phone functions were limited mainly to simple address books and text messaging, today's predominant smartphones and tablets support almost endless functionality via third-party application software, bringing an insatiable hunger for higher download rates. Telecommunication associations all around the world [1] are, therefore, continuously working on new cellular network technologies. This comes along with the introduction of advanced digital modulation schemes with higher spectral efficiency; multiple-input, multiple-output (MIMO)-based radio interfaces; and carrier aggregation (CA) [2].
- Published
- 2015
97. First-in-man analysis of the i-cor assist device in patients with cardiogenic shock
- Author
-
Sebastian Ewen, Andreas Link, Michael Böhm, Marcus Hennersdorf, Ulrich Laufs, Janine Pöss, Holger Thiele, Isabell Häger, Steffen D. Kriechbaum, Jochen Graf, and Sirak Petros
- Subjects
Male ,medicine.medical_specialty ,medicine.medical_treatment ,Myocardial Infarction ,Shock, Cardiogenic ,Hemodynamics ,Kidney Function Tests ,Critical Care and Intensive Care Medicine ,Mechanical assistance ,Tertiary Care Centers ,Norepinephrine (medication) ,Catecholamines ,Extracorporeal Membrane Oxygenation ,Refractory ,Germany ,Internal medicine ,medicine ,Extracorporeal membrane oxygenation ,Humans ,Blood Transfusion ,In patient ,Lactic Acid ,Mortality ,Retrospective Studies ,business.industry ,Cardiogenic shock ,General Medicine ,Middle Aged ,medicine.disease ,Surgery ,surgical procedures, operative ,Cardiology ,Female ,Hemodialysis ,Cardiology and Cardiovascular Medicine ,business ,Glomerular Filtration Rate ,medicine.drug - Abstract
In patients with refractory cardiogenic shock (CS) mechanical assistance by venous-arterial extracorporeal membrane oxygenation (VA-ECMO) therapy may be considered to reach haemodynamic stabilization. In this first-in-man study, we analysed the applicability of the new i-cor VA-ECMO assist device equipped with a diagonal pump system.In total, 15 patients with refractory CS were treated with the i-cor assist device in three tertiary care centres. In 71%, CS was due to acute myocardial infarction (AMI). At baseline, patients were hypotensive (systolic/diastolic blood pressure 97 ± 4/62 ± 4 mm Hg) despite high doses of catecholamines. Under ECMO therapy, a significant reduction in vasopressor therapy and serum lactate levels was observed (norepinephrine: 0.69 ± 0.1 µg/kg/min at baseline vs 0.21 ± 0.08 µg/kg/min on the last day of treatment, p0.0001; serum lactate: 6.7 ± 1.4 mmol/l at baseline versus 1.3 ± 0.1 mmol/l on the last day, p0.001). Inspiratory oxygen concentration was significantly reduced during the course of VA-ECMO support (80.4 ± 7.0% at baseline vs 42.7 ± 2.4% on final day; p0.001). At baseline, three patients (20%) were on continuous haemodialysis treatment. Of the 12 patients without haemodialysis at baseline, only one patient required haemodialysis during the course of ECMO treatment. Glomerular filtration rate (GFR) significantly increased with treatment (41.2 ± 7.4 at baseline vs 69.0 ± 10.8 on last day; p=0.006). Bleeding at the insertion site was recorded in two patients (13.3%). Overall, 11 patients (73.3%) needed blood transfusion. Three patients (20%) developed signs of limb ischaemia that were fully reversible. Haemolysis was recorded in five patients (33%). None of the complications required the interruption of ECMO therapy. Overall mortality was 33.3% (five patients); two patients died during, and three patients after, ECMO therapy.This first-in-man analysis suggests that the i-cor ECMO device is successfully applicable in humans. The data set the stage for further evaluation of this novel system and provide the necessary basis to design randomised evaluations.
- Published
- 2014
98. Pulsatile Venoarterial Perfusion Using a Novel Synchronized Cardiac Assist Device Augments Coronary Artery Blood Flow During Ventricular Fibrillation
- Author
-
Georg Matheis, Ivo Simundic, Michael Böhm, Christian Werner, Andreas Link, Bodo Cremers, Bruno Scheller, Holger Gorhan, and Ulrich Laufs
- Subjects
medicine.medical_specialty ,Mean arterial pressure ,business.industry ,Cardiogenic shock ,Biomedical Engineering ,Pulsatile flow ,Central venous pressure ,Medicine (miscellaneous) ,Bioengineering ,General Medicine ,medicine.disease ,Pulse pressure ,Biomaterials ,Coronary circulation ,medicine.anatomical_structure ,Internal medicine ,Ventricular fibrillation ,Cardiology ,Medicine ,Pulmonary wedge pressure ,business - Abstract
Patients with cardiogenic shock have a very high mortality. Here we report the first use of a percutaneous pulsatile cardiac assist device, based on a diagonal pump synchronized with the heart cycle by means of an electrocardiographic signal in adult pigs. Eight domestic pigs underwent mandatory ventilation. During sinus rhythm, there were no differences between pulsatile and nonpulsatile perfusion with regard to pulmonary artery pressure, pulmonary wedge pressure, central venous pressure, mean arterial pressure (MAP), mean pulse pressure, and mean coronary artery flow (CAF). After 2 min of complete cardiac arrest (ventricular fibrillation), circulatory support with the i-cor in venoarterial nonpulsatile extracorporeal membrane oxygenation (ECMO) mode (3 L/min) restored systemic circulation, with an increase of MAP to 78.3 mm Hg and CAF to 5.27 mL/min. After changing from ECMO settings to pulsatile mode (3 L/min, 75 bpm, pulse amplitude range 3500 rpm), MAP did not change significantly (75.6 mm Hg); however, CAF increased to 8.45 mL/min. After changing back to nonpulsatile mode, MAP remained stable (83.6 mm Hg), but CAF decreased to 4.85 mL/min. Thereafter, pulsatile cardiac assist was established with a reduced blood flow of 2.5 L/min, and the pulse amplitude range was extended to 4500 rpm. Under these conditions, MAP remained stable (71.0 mm Hg), but CAF significantly increased to 15.2 mL/min (P
- Published
- 2014
99. G-Protein-gekoppelte Rezeptoren: intrazelluläre Megaplexe und funktionell selektive Wirkstoffe
- Author
-
Christa E. Müller and Andreas Link
- Subjects
0301 basic medicine ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Chemistry ,General Medicine ,030226 pharmacology & pharmacy - Published
- 2016
100. High RIPK3 expression is associated with a higher risk of early kidney transplant failure
- Author
-
Adam Wahida, Christoph Schmaderer, Maike Büttner-Herold, Caterina Branca, Sainitin Donakonda, Flora Haberfellner, Carlos Torrez, Jessica Schmitz, Tobias Schulze, Tobias Seibt, Rupert Öllinger, Thomas Engleitner, Bernhard Haller, Katja Steiger, Roman Günthner, Georg Lorenz, Monica Yabal, Quirin Bachmann, Matthias C. Braunisch, Philipp Moog, Edouard Matevossian, Volker Aßfalg, Stefan Thorban, Lutz Renders, Martin R. Späth, Roman-Ulrich Müller, Dirk L. Stippel, Wilko Weichert, Julia Slotta-Huspenina, Sibylle von Vietinghoff, Ondrej Viklicky, Douglas R. Green, Roland Rad, Kerstin Amann, Andreas Linkermann, Jan Hinrich Bräsen, Uwe Heemann, and Stephan Kemmner
- Subjects
Nephrology ,Molecular biology ,Science - Abstract
Summary: Renal ischemia-reperfusion injury (IRI) is associated with reduced allograft survival, and each additional hour of cold ischemia time increases the risk of graft failure and mortality following renal transplantation. Receptor-interacting protein kinase 3 (RIPK3) is a key effector of necroptosis, a regulated form of cell death. Here, we evaluate the first-in-human RIPK3 expression dataset following IRI in kidney transplantation. The primary analysis included 374 baseline biopsy samples obtained from renal allografts 10 minutes after onset of reperfusion. RIPK3 was primarily detected in proximal tubular cells and distal tubular cells, both of which are affected by IRI. Time-to-event analysis revealed that high RIPK3 expression is associated with a significantly higher risk of one-year transplant failure and prognostic for one-year (death-censored) transplant failure independent of donor and recipient associated risk factors in multivariable analyses. The RIPK3 score also correlated with deceased donation, cold ischemia time and the extent of tubular injury.
- Published
- 2023
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.