600 results on '"Yubin Li"'
Search Results
552. Optimization of the Extraction Technology of Lentinan from Lentinus edodes (berk.) sing by Response Surface Method.
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Zhengdan ZHONG, Jing DENG, Huachang WU, Wei ZOU, Shangchun ZUO, Yang LIU, Yubin LI, Jialu GONG, and Jianjun ZHANG
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RESPONSE surfaces (Statistics) ,EXTRACTION (Chemistry) ,REGRESSION analysis ,LENTINUS ,AGARICALES ,BASIDIOMYCETES - Abstract
[Objective] To optimize the extraction technology of lentinan from Lentinus edodes (berk.) sing by response surface method. [Methods] With the fruiting body of L. edodes as the research materials, the extraction time, extraction temperature and solid-liquid ratio were optimized during the extraction of lentinan based on single factor test. Regression equation with the extraction rate of lentinan as the target function was obtained by Design-expert software. [Results] Based regression analysis, the optimal technology was 3.8 h extraction time, 92 °C extraction temperature and 1:43 solid-liquid ratio. Under this optimal condition, the mean value of the extraction rate of lentinan was 7.865% in verification test. [Conclusions] The research result was close to the predicted value (7.893%), showing that this regression model had good fitting degree. [ABSTRACT FROM AUTHOR]
- Published
- 2015
553. Time course of revascularization in human ovarian tissue after heterotopic transplantation in NOD-SCID mice
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H.D. Long, C. Zhou, and Yubin Li
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medicine.medical_specialty ,Pathology ,business.industry ,medicine.medical_treatment ,Ovarian tissue ,Obstetrics and Gynecology ,Nod ,Scid mice ,Revascularization ,Surgery ,Reproductive Medicine ,Time course ,medicine ,business ,Heterotopic transplantation - Published
- 2007
554. Inhibition of Caspase-1 Ameliorates Ischemia-Associated Blood-Brain Barrier Dysfunction and Integrity by Suppressing Pyroptosis Activation
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Yubin Liang, Pingping Song, Wei Chen, Xuemin Xie, Rixin Luo, Jiehua Su, Yunhui Zhu, Jiamin Xu, Rongrong Liu, Peizhi Zhu, Yusheng Zhang, and Min Huang
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ischemic stroke ,caspase-1 ,blood-brain barrier ,pyroptosis ,RAGE ,MAPK ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Ischemic cerebral infarction represents a significant cause of disability and death worldwide. Caspase-1 is activated by the NLRP3/ASC pathway and inflammasomes, thus triggering pyroptosis, a programmed cell death. In particular, this death is mediated by gasdermin D (GSDMD), which induces secretion of interleukin (IL)-1β and IL-18. Accordingly, inhibition of caspase-1 prevents the development and worsening of multiple neurodegenerative diseases. However, it is not clear whether inhibition of caspase-1 can preserve blood-brain barrier (BBB) integrity following cerebral infarction. This study therefore aimed at understanding the effect of caspase-1 on BBB dysfunction and its underlying mechanisms in permanent middle cerebral artery occlusion (MCAO). Our findings in rat models revealed that expression of caspase-1 was upregulated following MCAO-induced injury in rats. Consequently, pharmacologic inhibition of caspase-1 using vx-765 ameliorated ischemia-induced infarction, neurological deficits, and neuronal injury. Furthermore, inhibition of caspase-1 enhanced the encapsulation rate of pericytes at the ischemic edge, decreased leakage of both Evans Blue (EB) and matrix metalloproteinase (MMP) proteins, and upregulated the levels of tight junctions (TJs) and tissue inhibitors of metalloproteinases (TIMPs) in MCAO-injured rats. This in turn improved the permeability of the BBB. Meanwhile, vx-765 blocked the activation of ischemia-induced pyroptosis and reduced the expression level of inflammatory factors such as caspase-1, NLRP3, ASC, GSDMD, IL-1β, and IL-18. Similarly, vx-765 treatment significantly reduced the expression levels of inflammation-related receptor for advanced glycation end products (RAGE), high-mobility family box 1 (HMGB1), mitogen-activated protein kinase (MAPK), and nuclear factor-κB (NF-κB). Evidently, inhibition of caspase-1 significantly improves ischemia-associated BBB permeability and integrity by suppressing pyroptosis activation and the RAGE/MAPK pathway.
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- 2021
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555. Research on Theory and a Performance Analysis of an Innovative Rehabilitation Robot
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Junyu Wu, Yubin Liu, Jie Zhao, Xizhe Zang, and Yingzi Guan
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parallel robot ,washout algorithm ,performance analysis ,rehabilitation training ,Chemical technology ,TP1-1185 - Abstract
This paper presents an innovative application of a 6-DOF robot in the field of rehabilitation training. This robot operates in a parallel fashion for lower limb movement, which adopts a new structure that can help patients to carry out a variety of rehabilitation exercises. Traditional parallel robots, such as the Stewart robot, have the characteristics of strong bearing capacity. However, it is difficult to achieve high-speed, high-acceleration and long journey movement. This paper presents a new robot configuration that can address these problems. This paper also conducts an all-around characteristic analysis of this new parallel robot, including kinematics, dynamics and structure, to better study the robot and improve its performance. This paper optimizes an algorithm to make it more suitable for rehabilitation training. Finally, the performance improvements brought by optimization are verified by simulations.
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- 2022
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556. Understanding Divide-Conquer-Scanning Worms.
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Yubin Li, Zesheng Chen, and Chao Chen
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- 2008
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557. Comparison of fertilization outcome between microdrop and open insemination methods in non-male factor IVF patients.
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Yubin Li, Tao Li, Qingyun Mai, Lingli Long, and Jianping Ou
- Abstract
Both microdrop and open methods are commonly used for in vitro fertilization (IVF) protocols for embryo culture as well as oocyte insemination. However, few comparative studies evaluating the microdrop or open method of insemination on the fertilization outcome and subsequent embryo development have been performed. A randomized study was conducted to compare microdrop and open fertilization with respect to fertilization rate and embryo development among non-male factor patients undergoing in vitro fertilization and embryo transfer (IVF-ET). The results presented in this study demonstrate that the fertilization failure rate [total fertilization failure rate (TFF) plus low fertilization rate (<25% oocytes fertilized)] in the microdrop insemination group was higher than in the open insemination group (11.9%versus 3.3%, p<0.001), while the good quality embryo rate and pregnancy rate did not differ significantly between the groups. As a highly complicated process involving many extrinsic and intrinsic factors, further studies are needed to confirm the effects of these insemination methods on the rate of fertilization failure. [ABSTRACT FROM AUTHOR]
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- 2014
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558. Low-toxicity FePt nanoparticles for the targeted and enhanced diagnosis of breast tumors using few centimeters deep whole-body photoacoustic imaging
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Yubin Liu, Pei-Chun Wu, Sen Guo, Pi-Tai Chou, Chuxia Deng, Shang-Wei Chou, Zhen Yuan, and Tzu-Ming Liu
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Whole-body photoacoustic imaging ,Breast cancer ,Imaging depth ,FePt nanoparticles ,Physics ,QC1-999 ,Acoustics. Sound ,QC221-246 ,Optics. Light ,QC350-467 - Abstract
A considerable amount of early breast tumors grown at a depth over 2 cm in breast tissues. With high near-infrared absorption of iron-platinum (FePt) nanoparticles, we achieved few centimeters deep photoacoustic (PA) imaging for the diagnosis of breast tumors. The imaging depth can extend over 5 cm in chicken breast tissues at the low laser energy density of 20 mJ/cm2 (≤ ANSI safety limit). After anti-VEGFR conjugation and the tail-vein injection, we validated their targeting on tumor sites by the confocal microscopy and PA imaging. Using a home-made whole-body in vivo PA imaging, we found that the nanoparticles were rapidly cleared away from the site of the tumor and majorly metabolized through the liver. These results validated the clinical potential of the FePt nanoparticles in the low-toxicity PA theragnosis of early breast cancer and showed the capacity of our whole-body PA imaging technique on monitoring the dynamic biodistribution of nanoparticles in the living body.
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- 2020
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559. High APRIL Levels Are Associated With Slow Disease Progression and Low Immune Activation in Chronic HIV-1-Infected Patients
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Yubin Liu, Xiuxia Li, Yang Han, Zhifeng Qiu, Xiaojing Song, Bingxiang Li, Han Zhang, Hongye Wang, Kai Feng, Longding Liu, Jingjing Wang, Ming Sun, and Taisheng Li
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APRIL ,BAFF ,HIV-1 disease progression ,antibody response ,immune activation ,functional cells ,Medicine (General) ,R5-920 - Abstract
Objective: B-cell-activating factor (BAFF) has been determined to be involved in HIV-1 infection and is correlated with disease progression, while its homologous molecule, a proliferation-inducing ligand (APRIL), is less frequently reported, and its role remains unclear. We aimed to characterize the APRIL levels in subjects with different HIV-1 infection statuses and determine the relationships with disease progression and immune activation.Methods: The plasma levels of APRIL were compared among 17 long-term non-progressors (LTNPs), 17 typical progressors (TPs), 10 ART-treated patients, and 10 healthy donors (HDs). Seventeen LTNPs and a subset of TPs (n = 6) who initiated ART were assessed longitudinally. The correlations between the APRIL levels and markers of disease progression, B-cell count and specific antibody response, and markers of immune activation and functional cells were analyzed.Results: The circulating APRIL levels were significantly elevated in the LTNPs relative to the TPs, ART-treated patients, and HDs. The longitudinal investigation revealed that the APRIL levels were decreased during follow-up in the LTNPs. ART did not significantly influence the APRIL levels. The levels of plasma APRIL were negatively correlated with the plasma HIV-1 viral load and cellular HIV-1 DNA levels and positively correlated with the CD4+ T-cell count and CD4/CD8 ratio. An inverse correlation was observed between the APRIL and BAFF levels. Furthermore, the APRIL levels were negatively correlated with the frequency of activated CD8+ T cells and levels of interferon gamma-induced protein 10 (IP-10) and monocyte chemoattractant protein-1 (MCP-1). Finally, positive correlations were observed among the APRIL levels, the frequency of CD8+CD28+ T cells, and natural killer (NK) cell count.Conclusion: The APRIL levels were elevated in the LTNPs and negatively correlated with disease progression and immune activation, suggesting likely protective activity in HIV-1 infection.
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- 2020
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560. Berberine mitigates cognitive decline in an Alzheimer’s Disease Mouse Model by targeting both tau hyperphosphorylation and autophagic clearance
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Ying Chen, Yuling Chen, Yubin Liang, Hongda Chen, Xiaoying Ji, and Min Huang
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Alzheimer’s disease ,Berberine ,Tau pathology ,Autophagy ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Berberine is a natural isoquinoline alkaloid isolated from the Rhizoma coptidis. Recent advances in research throw more lights of its beneficial role towards Alzheimer’s disease (AD), including promoting β-amyloid (Aβ) clearance, as well as inhibiting Aβ production in the triple-transgenic mouse model of Alzheimer’s disease (3×Tg AD). However, it remains unclarified if berberine has an effect on tau pathology. According to our study, berberine did not only significantly improve 3×Tg AD mice’s spatial learning capacity and memory retentions, but also attenuated the hyperphosphorylation of tau. via modulating the activity of Akt/glycogen synthase kinase-3β and protein phosphatase 2A. Moreover, berberine reduced the level of tau through an autophagy-based route. It promoted autophagic clearance of tau by enhancing the activity of autophagy via the class III PI3K/beclin-1 pathway. Thus, our results suggest that berberine could mitigate cognitive decline by simultaneously targeting the hyperphosphorylation of tau and the autophagic clearance of tau in AD mice. These findings strongly support berberine as a potential drug candidate for AD.
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- 2020
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561. Spatial and spectral regularization to discriminate tissues using multispectral photoacoustic imaging
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Aneline Dolet, François Varray, Simon Mure, Thomas Grenier, Yubin Liu, Zhen Yuan, Piero Tortoli, and Didier Vray
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Photoacoustic imaging ,Multispectral imaging ,Spatial and spectral filtering ,Telecommunication ,TK5101-6720 ,Electronics ,TK7800-8360 - Abstract
Abstract Photoacoustics is a hybrid modality used to image biological tissues. As optical absorption of tissues depends on the wavelength of the transmitted light, multispectral photoacoustic datasets can be obtained by changing this wavelength. This study presents a regularization method to segment multispectral photoacoustic images based on both the spatial and spectral features of the dataset pixels. The proposed processing is adapted from the spatiotemporal mean-shift approach and cluster patterns with similar spectral profiles, i.e., the variation of the received amplitude among the wavelengths, independent of their initial position. The segmentation performance of this method has been experimentally tested on multispectral photoacoustic tomographic data. We initially used a phantom that contained fresh and stale liver samples, and then a second phantom that contained two blood dilutions or a colored absorber. Experimentally, a clustering performance greater than 98% is achieved. This method makes it possible to discriminate between different media, between the same medium as fresh or stale, and between the same medium with different dilutions.
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- 2018
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562. Microbial Diversity Characteristics of Areca Palm Rhizosphere Soil at Different Growth Stages
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Siyuan Ma, Yubin Lin, Yongqiang Qin, Xiaoping Diao, and Peng Li
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Areca catechu ,microbiome ,interaction network ,plant development ,high-throughput sequencing ,Botany ,QK1-989 - Abstract
The rhizosphere microflora are key determinants that contribute to plant health and productivity, which can support plant nutrition and resistance to biotic and abiotic stressors. However, limited research is conducted on the areca palm rhizosphere microbiota. To further study the effect of the areca palm’s developmental stages on the rhizosphere microbiota, the rhizosphere microbiota of areca palm (Areca catechu) grown in its main producing area were examined in Wanning, Hainan province, at different vegetation stages by an Illumina Miseq sequence analysis of the 16S ribosomal ribonucleic acid and internal transcribed spacer genes. Significant shifts of the taxonomic composition of the bacteria and fungi were observed in the four stages. Burkholderia-Caballeronia-Paraburkholderia were the most dominant group in stage T1 and T2; the genera Allorhizobium-Neorhizobium-Pararhizobium-Rhizobium were decreased significantly from T1 to T2; and the genera Acidothermus and Bacillus were the most dominant in stage T3 and T4, respectively. Meanwhile, Neocosmospora, Saitozyma, Penicillium, and Trichoderma were the most dominant genera in the stage T1, T2, T3, and T4, respectively. Among the core microbiota, the dominant bacterial genera were Burkholderia-Caballeronia-Paraburkholderia and Bacillus, and the dominant fungal genera were Saitozyma and Trichoderma. In addition, we identified five bacterial genera and five fungal genera that reached significant levels during development. Finally, we constructed the OTU (top 30) interaction network of bacteria and fungi, revealed its interaction characteristics, and found that the bacterial OTUs exhibited more extensive interactions than the fungal OTUs. Understanding the rhizosphere soil microbial diversity characteristics of the areca palm could provide the basis for exploring microbial association and maintaining the areca palm’s health.
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- 2021
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563. InsertionMapper: a pipeline tool for the identification of targeted sequences from multidimensional high throughput sequencing data.
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Wenwei Xiong, Limei He, Yubin Li, Hugo K. Dooner, and Chunguang Du
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GENOMES ,GENETICS ,NUCLEIC acids ,MOBILE genetic elements ,HEREDITY - Abstract
Background: The advent of next-generation high-throughput technologies has revolutionized whole genome sequencing, yet some experiments require sequencing only of targeted regions of the genome from a very large number of samples. These regions can be amplified by PCR and sequenced by next-generation methods using a multidimensional pooling strategy. However, there is at present no available generalized tool for the computational analysis of target-enriched NGS data from multidimensional pools. Results: Here we present InsertionMapper, a pipeline tool for the identification of targeted sequences from multidimensional high throughput sequencing data. InsertionMapper consists of four independently working modules: Data Preprocessing, Database Modeling, Dimension Deconvolution and Element Mapping. We illustrate InsertionMapper with an example from our project 'New reverse genetics resources for maize', which aims to sequence-index a collection of 15,000 independent insertion sites of the transposon Ds in maize. Identified sequences are validated by PCR assays. This pipeline tool is applicable to similar scenarios requiring analysis of the tremendous output of short reads produced in NGS sequencing experiments of targeted genome sequences. Conclusions: InsertionMapper is proven efficacious for the identification of target-enriched sequences from multidimensional high throughput sequencing data. With adjustable parameters and experiment configurations, this tool can save great computational effort to biologists interested in identifying their sequences of interest within the huge output of modern DNA sequencers. InsertionMapper is freely accessible at https://sourceforge.net/p/ insertionmapper and http://bo.csam.montclair.edu/du/insertionmapper. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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564. Changes in lengths of the four seasons in China and the relationship with changing climate during 1961–2020.
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Yiqi, Chen, Yuanjie, Zhang, Yubin, Li, and Shugang, Song
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CLIMATE change , *METEOROLOGICAL stations , *SPRING , *AUTUMN , *ATLANTIC multidecadal oscillation , *SUMMER - Abstract
The spatial–temporal characteristics of changes in lengths and onsets of the four seasons in China during 1961–2020 are investigated using daily temperature observations from weather stations. The relationship between changes in season lengths and climate change is also explored based on annual temperature variation, the Atlantic Multidecadal Oscillation (AMO) and the Pacific Decadal Oscillation (PDO). The results show that lengths of spring and autumn are shorter in the plateau region but longer in the southwest compared with other regions. In the past 60 years, the onset was generally advanced for spring and summer, whereas it was delayed for autumn and winter. Lengths of summer (winter) showed an overall increase (decrease) as 10.78 days (11.74 days) from the 1960s to the 2010s, which is positively (negatively) correlated with the temperature variation. Comparatively, changes in lengths of spring and autumn are much smaller and weakly correlated with the temperature variation. However, lengths of spring and autumn significantly increased in the plateau region and parts of the southwest and decreased in the south, which is positively and negatively correlated with the temperature trend, respectively. Changes in season lengths in China are also related to the AMO and modulated by the PDO phases. At the ~55‐year scale, summer lengths and winter lengths are simultaneously affected by the AMO and the PDO. The impact of the AMO on changes in lengths of spring and autumn is mainly due to its effect on the nonlinear trend associated with long‐term climate change. [ABSTRACT FROM AUTHOR]
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- 2023
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565. Influence of Dy-doping on ferroelectric and dielectric properties in BiDyFeO ceramics.
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Yubin Li, Jun Yu, Jianjun Li, Chaodan Zheng, Yunyi Wu, Yuan Zhao, Meng Wang, and Yunbo Wang
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DYSPROSIUM ,FERROELECTRIC crystals ,FERROMAGNETIC materials ,SCANNING electron microscopes ,CERAMICS - Abstract
BiDyFeO (BDFO) (x = 0−0.2) ceramics were synthesized by solid-state reaction method. The influence of Dy dopant on crystal structural, dielectric and ferroelectric properties was investigated. The lattice parameter and the Curie temperature of BDFO were degraded continuously with increasing contents of Dy cations. Leakage current density, ferroelectric polarization and dielectric loss were improved by appropriate Dy doping. When x = 0.1, BDFO showed the best electric properties. At applied electric field of 53 kV/cm, the remnant polarization (2 P) was 12.2 μC/cm.These improvements in electric properties in BDFO ceramics could have resulted from the relatively low oxygen vacancy concentration and structural distortion. [ABSTRACT FROM AUTHOR]
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- 2011
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566. An Improved Approach for Parameterizing Surface-Layer Turbulent Transfer Coefficients in Numerical Models.
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Yubin Li, Zhiqiu Gao, Lenschow, Donald H., and Fei Chen
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TURBULENCE , *NUSSELT number , *THERMODYNAMICS , *METEOROLOGICAL research , *EQUATIONS - Abstract
Based on classic iterative computation results, new equations to calculate the surface turbulent transfer coefficients are proposed, which allow for large ratios of the momentum and heat roughness lengths. Compared to the Launiainen scheme, our proposed scheme generates results closer to classical iterative computations. Under unstable stratification, the relative error in the Launiainen scheme increases linearly with increasing instability, even exceeding 15%, while the relative error of the present scheme is always less than 8.5%. Under stable stratification, the Launiainen scheme uses two equations, one for 0 < Ri ≤ 0.08 and another for 0.08 < Ri ≤ 0.2, and does not consider the condition that Ri > 0.2, while its relative errors in the region 0 < Ri ≤ 0.2 exceed 31 and 24% for momentum and heat transfer coefficients, respectively. In contrast, the present scheme uses only one equation for 0 < Ri ≤ 0.2 and another equation for Ri > 0.2, and the relative error of the present scheme is always less than 14%. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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567. Solid-surface vitrification is an appropriate and convenient method for cryopreservation of isolated rat follicles.
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Weijie Xing, Canquan Zhou, Jiang Bian, Montag, Markus, Yanwen Xu, Yubin Li, and Tao Li
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CRYOPRESERVATION of organs, tissues, etc. ,CRYOPRESERVATION of cells ,CANCER in women ,CANCER patients ,SPRAGUE Dawley rats - Abstract
Background: Cryopreservation of isolated follicles may be a potential option to restore fertility in young women with cancer, because it can prevent the risks of cancer transmission. Several freezing protocols are available, including slow-rate freezing, open-pulled straws vitrification (OPS) and solid-surface vitrification (SSV, a new freezing technique). The purpose of our study was to investigate the effects of these freezing procedures on viability, ultrastructure and developmental capacity of isolated rat follicles. Methods: Isolated follicles from female Sprague-Dawley rats were randomly assigned to SSV, OPS and slow-rate freezing groups for cryopreservation. Follicle viability assessment and ultrastructural examination were performed after thawing. In order to study the developmental capacity of thawed follicles, we performed in vitro culture with a three-dimensional (3D) system by alginate hydrogels. Results: Our results showed that the totally viable rate of follicles vitrified by SSV (64.76%) was slightly higher than that of the OPS group (62.38%) and significantly higher than that of the slow-rate freezing group (52.65%; P < 0.05). The ultrastructural examination revealed that morphological alterations were relatively low in the SSV group compared to the OPS and slow-rate freezing groups. After in vitro culture within a 3D system using alginate hydrogels, we found the highest increase (28.90 ± 2.21 μm) in follicle diameter in follicles from the SSV group. The estradiol level in the SSV group was significantly higher than those in the OPS and slow-rate freezing groups at the end of a 72-hr culture period (P < 0.05). Conclusions: Our results suggest that the SSV method is an appropriate and convenient method for cryopreservation of isolated rat follicles compared with the conventional slow-rate freezing method and the OPS method. [ABSTRACT FROM AUTHOR]
- Published
- 2010
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568. IL-33 exacerbates antigen-induced arthritis by activating mast cells.
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Damo Xu, Hui-Rong Jiang, Kewin, Peter, Yubin Li, Rong Mu, Fraser, Alasdair R., Pitman, Nick, Kurowska-Stolarska, Mariola, McKenzie, Andrew N. J., Mclnnes, Iain B., and Liew, Foo Y.
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RHEUMATOID arthritis ,CONNECTIVE tissue diseases ,MAST cells ,ANTIGENS ,CHEMOKINES ,FIBROBLASTS ,CYTOKINES - Abstract
IL-33, a cytokine of the IL-1 family, is closely associated with type lI T cell responses. Here, we report an unexpected proinflammatory role of IL-33 in inflammatory arthritis. IL-33 was expressed in synovial fibroblasts from patients with rheumatoid arthritis (RA). Expression was markedly elevated in vitro by inflammatory cytokines. Mice lacking ST2, the IL-33 receptor α-chain, developed attenuated collagen-induced arthritis (CIA) and reduced ex viva collagen-specific induction of proinflammatory cytokines (IL-17, TNFα, and lFNγ), and antibody production. Conversely, treatment of wild-type (WI) but not ST2
-/- mice with IL-33 exacerbated CIA and elevated production of both proinflammatory cytokines and anti-collagen antibodies. Mast cells expressed high levels of ST2 and responded directly to IL-33 to produce a spectrum of inflammatory cytokines and chemokines in vitro. In vivo, IL-33 treatment exacerbated CIA in ST2-/- mice engrafted with mast cells from WT but not from ST2-/- mice. Disease exacerbation was accompanied by elevated expression levels of proinflammatory cytokines. Our results demonstrate that IL-33 is a critical proinflammatory cytokine for inflammatory joint disease that integrates fibroblast activation with downstream immune activation mainly via an IL-33-driven, mast-cell-dependent pathway. Thus, this IL-1 superfamily member represents a therapeutic target for RA. [ABSTRACT FROM AUTHOR]- Published
- 2008
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569. ROSINA (RSI) is part of a CACTA transposable element, TamRSI , and links flower development to transposon activity.
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Mario Roccaro, Yubin Li, Hans Sommer, and Heinz Saedler
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DNA , *PLANT genomes , *MOBILE genetic elements , *TRANSPOSONS , *PLANT development - Abstract
Abstract  ROSINA (RSI) was isolated as a DNA binding factor able to bind to the CArG-box present in the promoter of the MADS-box gene DEFICIENS of Antirrhinum majus. The mosaic nature of RSI and its multi-copy presence in the A. majus genome indicated that RSI could be a part of a mobile genetic element. Here we show that RSI is a part of a CACTA transposable element system of A. majus, named TamRSI, which has evolved and is still evolving within the terminal inverted repeats (TIRs) of this CACTA transposon. Interestingly, RSI is always found in opposite orientation with respect to the transcription of a second gene present within the CACTA transposon, which encodes a putative TRANSPOSASE (TNP). This structural configuration has not yet been described for any member of the CACTA transposons superfamily. Internal deletion derivatives of the TamRSI produce aberrant RSI transcripts (RSI-ATs) that carry parts of the RSI RNA fused to parts of the TNP RNA. In addition, an intriguing seed phenotype shown by RNAi transgenic lines generated to silence RSI, relate TamRSI to epigenetic mechanisms and associate the control of flower development to transposon activity. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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570. Gene movement by Helitron transposons contributes to the haplotype variability of maize.
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Jinsheng Lai, Yubin Li, Messing, Joachim, and Dooner, Hugo K.
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GENETIC transformation , *PARTICLES (Nuclear physics) , *LIVESTOCK , *GENOMES , *TRANSPOSONS , *MOBILE genetic elements - Abstract
Different maize inbred lines are polymorphic for the presence or absence of genic sequences at various allelic chromosomal locations. In the bz genomic region, located in 9S, sequences homologous to four different genes from rice and Arabidopis are present in line McC but absent from line B73. It is shown here that this apparent intraspecific violation of genetic colinearity arises from the movement of genes or gene fragments by Helitrons, a recently discovered class of eukaryotic transposons. Two Helitrons, HelA and HelB, account for all of the genic differences distinguishing the two bz locus haplotypes. HelA is 5.9 kb long and contains sequences for three of the four genes found only in the McC bz genomic region. A nearly identical copy of HelA was isolated from a 5S chromosomal location in B73. Both the 9S and 5S sites appear to be polymorphic in maize, suggesting that these Neutrons have been active recently. Helitrons lack the strong predictive terminal features of other transposons, so the definition of their ends is greatly facilitated by the identification of their vacant sites in Neutron-minus lines. The ends of the 2.7-kb HelB Neutron were discerned from a comparison of the McC haplotype sequence with that of yet a third line, Mo17, because the HelB vacant site is deleted in B73. Maize Helitrons resemble rice Pack-MULEs in their ability to capture genes or gene fragments from several loci and move them around the genome, features that confer on them a potential role in gene evolution. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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571. Heterogeneous TiO2@Nb2O5 composite as a high-performance anode for lithium-ion batteries
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Yubin Liu, Liwei Lin, Weifeng Zhang, and Mingdeng Wei
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Medicine ,Science - Abstract
Abstract Heterogeneous TiO2@Nb2O5 composites, in which TiO2 nanoparticles were evenly embedded on ultrathin Nb2O5 nanosheets, were used as anode materials for LIBs and demonstrated high capacities and excellent rate capability. For instance, this material displayed large capacities of 166.3 and 129.1 mA h g−1 at current densities of 1 A g−1 after 100 cycles and 5 A g−1 after 300 cycles, respectively.
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- 2017
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572. Influence of obesity on in-hospital and postoperative outcomes of hepatic resection for malignancy: a 10-year retrospective analysis from the US National Inpatient Sample
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Jiafa He, Heping Liu, Li Deng, Xiangling Wei, Taiying Chen, Shangzhou Xia, and Yubin Liu
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Medicine - Abstract
ObjectivesThe influence of obesity on the outcomes of curative liver resection for malignancies remains controversial. We aimed to compare the in-hospital outcomes of liver resection for malignancy between obese and non-obese patients.DesignThis was a population-based, retrospective, observational study using data from the Nationwide Inpatient Sample (NIS), the largest all-payer US inpatient care database.SettingHospitalisations of adults ≥18 years old with diagnoses of primary hepatobiliary malignancy or secondary malignant neoplasms of liver in the USA were identified from the NIS database between 2005 and 2014.ParticipantsData of 18 398 patients ≥18 years old and underwent liver resection without pancreatic resection in the NIS were extracted. All included subjects had primary hepatobiliary malignancy or secondary malignant neoplasms of the liver. Patients were divided into obese and non-obese groups. These groups were compared with respect to postoperative complications, length of hospital stay and hospital cost according to surgical extent and approach.InterventionsPatients were undergoing lobectomy of liver or partial hepatectomy.Primary and secondary outcome measuresThe primary endpoints of this study were postoperative complications, length of hospital stay and hospital cost.ResultsAfter adjustment, obese patients were significantly more likely to experience postoperative complications than were non-obese patients (adjusted OR 1.25, 95% CI 1.10 to 1.42), regardless of whether lobectomy or partial hepatectomy was performed. Furthermore, obesity was significantly associated with increased risk of postoperative complications in patients who underwent open liver resection, but not laparoscopic resection. No significant difference was observed in length of hospital stay or total hospital costs between obese and non-obese patients.ConclusionsAfter adjustment for preoperative comorbidities and other potential confounders, obesity is significantly associated with greater risk of complications in patients undergoing open liver resection for malignancy, but not laparoscopic resection.
- Published
- 2019
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573. PEGylated liposomal photosensitizers as theranostic agents for dual-modal photoacoustic and fluorescence imaging-guided photodynamic therapy
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Hao Xu, Yubin Liu, Junle Qu, and Zhen Yuan
- Subjects
Liposome ,photosensitizer ,photodynamic therapy ,photoacoustic imaging ,fluorescence imaging ,Technology ,Optics. Light ,QC350-467 - Abstract
The photosensitizer (PS) as photodynamic therapy (PDT) agent, can also serve as the contrast agent for dual-modal fluorescence imaging (FLI) and photoacoustic imaging (PAI) for precise cancer theranostics. In this study, the PAI capability of commercial PS, benzoporphyrin derivative monoacid ring-A (BPD) were examined and compared with that from the other PSs and dyes such as TPPS4, Cy5 dye and ICG. We discovered that BPD exhibited its advantage as contrast agent for PAI. Meanwhile, BPD can also serve as the contrast agent for enhanced FLI. In particular, the PEGylated nanoliposome (PNL) encapsulated BPD (LBPD) was produced for contrast enhanced dual-modal FLI and PAI and imaging-guided high-efficiency PDT. Enhanced FLI and PAI results demonstrated the significant accumulation of LBPD both within and among individual tumor during 24h monitoring for in vivo experiment tests. In-vitro and in-vivo PDT tests were also performed, which showed that LBPD have higher PDT efficiency and can easily break the blood vessel of tumor tissues as compared to that from BPD. It was discovered that LBPD has great potentials as a diagnosis and treatment agent for dual-modal FLI and PAI-guided PDT of cancer.
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- 2019
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574. Berberine Improves Cognitive Impairment by Simultaneously Impacting Cerebral Blood Flow and β-Amyloid Accumulation in an APP/tau/PS1 Mouse Model of Alzheimer’s Disease
- Author
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Chenghui Ye, Yubin Liang, Ying Chen, Yu Xiong, Yingfang She, Xiaochun Zhong, Hongda Chen, and Min Huang
- Subjects
Alzheimer’s disease ,BBR ,cerebral blood flow ,β-amyloid ,Cytology ,QH573-671 - Abstract
Alzheimer’s disease (AD) is accompanied by β-amyloid (Aβ), neurofibrillary tangles, and neuron cell death, and is one of the most commonly occurring diseases among the elderly. The pathology of AD is complex, involving Aβ overproduction and accumulation, tau hyperphosphorylation, and neuronal loss. In addition, chronic cerebral hypoperfusion (CCH) is ubiquitous in the AD patients and plans a pivotal role in triggering and exacerbating the pathophysiological progress of AD. The goal of this study was to investigate the neuroprotective properties of berberine (BBR) and the underlying mechanism. During the study, BBR was administrated to treat the triple-transgenic mouse model of Alzheimer’s disease (3×Tg AD). To thoroughly evaluate the effects of the BBR administration, multiple manners were utilized, for instance, 3D arterial spin labeling technique, Morris water maze assay, immunofluorescence staining, TUNEL assay, laser speckle contrast imaging, western blotting, etc. The results showed that BBR ameliorated cognitive deficits in 3×Tg AD mice, reduced the Aβ accumulation, inhibited the apoptosis of neurons, promoted the formation of microvessels in the mouse brain by enhancing brain CD31, VEGF, N-cadherin, Ang-1. The new vessels promoted by BBR were observed to have a complete structure and perfect function, which in turn promoted the recovery of cerebral blood flow (CBF). In general, berberine is effective to 3×Tg AD mice, has a neuroprotective effect, and is a candidate drug for the multi-target prevention and treatment of AD.
- Published
- 2021
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575. Study on the compensating calcium ion method for existing concrete based on crystal infiltration waterproof materials
- Author
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Dishan Yang, Tongyu Yan, Yubin Lin, Jiyu Li, Xiaofei Ruan, Hong Zhou, and Jianguang Shi
- Subjects
Environmental sciences ,GE1-350 - Abstract
The quality of the the existing concrete surface in its repairing and strengthening is the key factor affecting the together working performance. The effective method to solve this problem is to use permeable crystal waterproof material to strengthen the existing concrete surface. In view of the existing old concrete which lacks free Ca2+ in the interior, the method of compensating calcium ion strengthening is proposed based on the action mechanism of permeable crystalline waterproof material. On the basis of DPS, calcium ion compensating agent Ca (OH)2, Na2SiO3 (sodium silicate) and Na2CO3 (potassium carbonate) solutes are added to prepare composite reinforcement solution for impregnation strengthening of concrete. Scanning electron microscopy (SEM) was used to observe the microstructure of the concrete before and after strengthening. It showed that after the entry of silicate ions, C-S-H colloid was formed by reaction with Ca (OH)2, and C-S-H gel blocked some pores, which made the inner microstructure more compact. The results of compressive strength before and after concrete strengthening show that the strengthening effect of calcium ion compensation method for low-strength concrete is better than that of permeable crystallization material strengthening method. The strength of C5 and C15 grade concrete is increased by 36.1% and 6% respectively, and the surface strength of 13.7 MPa concrete is increased by 16.7%.
- Published
- 2021
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576. Evaluation of Physical and Mechanical Properties of Fiber-Reinforced Poplar Scrimber
- Author
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Xiaolei Guo, Yubin Lin, Bin Na, Xingyu Liang, Mats Ekevad, Futang Ji, and Lingling Huang
- Subjects
Wood scrimber ,Glass fiber ,Density ,Mechanical properties ,Biotechnology ,TP248.13-248.65 - Abstract
The mechanical properties of poplar scrimber reinforced with glass fiber mesh were investigated. The influence of the different structures and densities were studied with respect to the modulus of rupture (MOR), modulus of elasticity (MOE), and impact toughness (IT). The glass fiber improved the mechanical properties of poplar scrimber. The MOR, MOE, and IT of the scrimber had an obvious dependence on the number of glass fiber layers. When the layers of glass fiber meshes were increased, the MOR, MOE, and IT were increased compared to the control group (scrimber without glass fiber reinforcement). The MOR, MOE, and IT of single-layer glass fiber reinforced scrimber increased a lot compared to the control group. The MOR, MOE, and IT of double-layer glass fiber reinforced scrimber (DGRS) were increased, but the amplitude of the increase was smaller than that of SGRS. Compared to the MOR, MOE, and IT of DGRS, the MOR, MOE, and IT of triple-layer glass fiber reinforced scrimber (TGRS) decreased slightly. When the density was increased, the increasing rate of the MOR, MOE, and IT of the glass fiber reinforced scrimber showed a downward trend, and the glass fiber had better strengthen effects on the scrimber at low density (0.6 g/cm3 and 0.7 g/cm3).
- Published
- 2016
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577. Estimation of Winter Wheat Production Potential Based on Remotely-Sensed Imagery and Process-Based Model Simulations
- Author
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Tingting Lang, Yanzhao Yang, Kun Jia, Chao Zhang, Zhen You, and Yubin Liang
- Subjects
production potential ,winter wheat ,DSSAT ,RS ,Science - Abstract
Crop production potential is an index used to evaluate crop productivity capacity in one region. The spatial production potential can help give the maximum value of crop yield and visually clarify the prospects of agricultural development. The DSSAT (Decision Support System for Agrotechnology Transfer) model has been used in crop growth analysis, but spatial simulation and analysis at high resolution have not been widely performed for exact crop planting locations. In this study, the light-temperature production potential of winter wheat was simulated with the DSSAT model in the winter wheat planting area, extracted according to Remote Sensing (RS) image data in the Jing-Jin-Ji (JJJ) region. To obtain the precise study area, a Decision Tree (DT) classification was used to extract the winter wheat planting area. Geographic Information System (GIS) technology was used to process spatial data and provide a map of the spatial distribution of the production potential. The production potential of winter wheat was estimated in batches with the DSSAT model. The results showed that the light-temperature production potential is between 4238 and 10,774 kg/ha in JJJ. The production potential in the central part of the planting area is higher than that in the south and north in JJJ due to the influences of light and temperature. These results can be useful for crop model simulation users and decision makers in JJJ.
- Published
- 2020
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578. Research on the Posture Control Method of Hexapod Robot for Rugged Terrain
- Author
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Yubin Liu, Chunbo Wang, He Zhang, and Jie Zhao
- Subjects
hexapod robot ,foot trajectory planning ,posture control ,rugged terrain ,autonomous recognition ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
This paper proposes a hexapod robot posture control method for rugged terrain to solve the problem of difficulty in realizing the posture control of a foot robot in rough terrain. The walking gait and original position of a six-legged robot is planned, and the Layer Identification of Tracking (LIT) strategy is developed to enable the robot to distinguish mild rugged terrain and severe rugged terrains automatically. The virtual suspension dynamic model is established. In mild rugged terrain, the posture maintenance strategy is adopted to keep the stability of the torso. In severe rugged terrain, the posture adjustment strategy is adopted to ensure the leg workspace and make it more widely adapt to the changing terrain, and a gravity center position adjustment method based on foot force distribution is designed to use foot force as feedback to control the position and attitude. The experiment of posture control in rough terrain and climbing experiment in the ladder terrain shows that the hexapod robot has good posture maintenance and posture adjustment effects when traversing complex terrain through the posture maintenance strategy and the posture adjustment strategy. Combined with the terrain identification method based on LIT, the hexapod robot can successfully climb the ladder terrain through the identification of the changing ladder terrain, and the movement of the posture adjustment process is stable.
- Published
- 2020
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579. A Task-Learning Strategy for Robotic Assembly Tasks from Human Demonstrations
- Author
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Guanwen Ding, Yubin Liu, Xizhe Zang, Xuehe Zhang, Gangfeng Liu, and Jie Zhao
- Subjects
dynamic movement primitives ,human–robot skills transfer ,movement segmentation ,robotic assembly ,visuo-spatial skill learning ,Chemical technology ,TP1-1185 - Abstract
In manufacturing, traditional task pre-programming methods limit the efficiency of human–robot skill transfer. This paper proposes a novel task-learning strategy, enabling robots to learn skills from human demonstrations flexibly and generalize skills under new task situations. Specifically, we establish a markerless vision capture system to acquire continuous human hand movements and develop a threshold-based heuristic segmentation algorithm to segment the complete movements into different movement primitives (MPs) which encode human hand movements with task-oriented models. For movement primitive learning, we adopt a Gaussian mixture model and Gaussian mixture regression (GMM-GMR) to extract the optimal trajectory encapsulating sufficient human features and utilize dynamical movement primitives (DMPs) to learn for trajectory generalization. In addition, we propose an improved visuo-spatial skill learning (VSL) algorithm to learn goal configurations concerning spatial relationships between task-relevant objects. Only one multioperation demonstration is required for learning, and robots can generalize goal configurations under new task situations following the task execution order from demonstration. A series of peg-in-hole experiments demonstrate that the proposed task-learning strategy can obtain exact pick-and-place points and generate smooth human-like trajectories, verifying the effectiveness of the proposed strategy.
- Published
- 2020
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580. A Framework for Human-Robot-Human Physical Interaction Based on N-Player Game Theory
- Author
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Rui Zou, Yubin Liu, Jie Zhao, and Hegao Cai
- Subjects
physical human-robot interaction ,game theory ,adaptive optimal control ,robot control ,Chemical technology ,TP1-1185 - Abstract
In order to analyze the complex interactive behaviors between the robot and two humans, this paper presents an adaptive optimal control framework for human-robot-human physical interaction. N-player linear quadratic differential game theory is used to describe the system under study. N-player differential game theory can not be used directly in actual scenerie, since the robot cannot know humans’ control objectives in advance. In order to let the robot know humans’ control objectives, the paper presents an online estimation method to identify unknown humans’ control objectives based on the recursive least squares algorithm. The Nash equilibrium solution of human-robot-human interaction is obtained by solving the coupled Riccati equation. Adaptive optimal control can be achieved during the human-robot-human physical interaction. The effectiveness of the proposed method is demonstrated by rigorous theoretical analysis and simulations. The simulation results show that the proposed controller can achieve adaptive optimal control during the interaction between the robot and two humans. Compared with the LQR controller, the proposed controller has more superior performance.
- Published
- 2020
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581. Feature Sensing and Robotic Grasping of Objects with Uncertain Information: A Review
- Author
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Chao Wang, Xuehe Zhang, Xizhe Zang, Yubin Liu, Guanwen Ding, Wenxin Yin, and Jie Zhao
- Subjects
uncertain objects ,geometric uncertainty ,physical uncertainty ,feature sensing ,robotic grasping ,Chemical technology ,TP1-1185 - Abstract
As there come to be more applications of intelligent robots, their task object is becoming more varied. However, it is still a challenge for a robot to handle unfamiliar objects. We review the recent work on the feature sensing and robotic grasping of objects with uncertain information. In particular, we focus on how the robot perceives the features of an object, so as to reduce the uncertainty of objects, and how the robot completes object grasping through the learning-based approach when the traditional approach fails. The uncertain information is classified into geometric information and physical information. Based on the type of uncertain information, the object is further classified into three categories, which are geometric-uncertain objects, physical-uncertain objects, and unknown objects. Furthermore, the approaches to the feature sensing and robotic grasping of these objects are presented based on the varied characteristics of each type of object. Finally, we summarize the reviewed approaches for uncertain objects and provide some interesting issues to be more investigated in the future. It is found that the object’s features, such as material and compactness, are difficult to be sensed, and the object grasping approach based on learning networks plays a more important role when the unknown degree of the task object increases.
- Published
- 2020
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582. Object-Based Thermal Image Segmentation for Fault Diagnosis of Reciprocating Compressors
- Author
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Rongfeng Deng, Yubin Lin, Weijie Tang, Fengshou Gu, and Andrew Ball
- Subjects
reciprocating compressors ,fault diagnosis ,thermal imaging ,support vector machines (SVM) ,Chemical technology ,TP1-1185 - Abstract
As an essential mechanical device in many industrial applications, reciprocating compressors have a high demand for operating efficiency and availability. Because the temperature of each part of a reciprocating compressor depends considerably on operating conditions, faults in any parts will cause the variation of the temperature distribution, which provides the possibility to distinguish the fault type of reciprocating compressors by differentiating the distribution using infrared thermal imaging. In this paper, three types of common fault are laboratory experimented in an uncontrolled temperature environment. The temperature distribution signals of a reciprocating compressor are captured by a non-contact infrared camera remotely in the form of heat maps during the experimental process. Based on the temperature distribution under baseline condition, temperature fields of six main components were selected via Hue-Saturation-Value (HSV) image as diagnostic features. During the experiment, the average grayscale values of each component were calculated to form 6-dimension vectors to represent the variation of the temperature distribution. A computational efficient multiclass support vector machine (SVM) model is then used for classifying the differences of the distributions, and the classification results demonstrate that the average temperatures of six main components aided by SVM is a promising technique to diagnose the faults of reciprocating compressors under various operating conditions with a classification accuracy of more than 99%.
- Published
- 2020
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583. The Role of Fluoxetine in Activating Wnt/β-Catenin Signaling and Repressing β-Amyloid Production in an Alzheimer Mouse Model
- Author
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Min Huang, Yubin Liang, Hongda Chen, Binchu Xu, Cuicui Chai, and Pengfei Xing
- Subjects
fluoxetine ,Alzheimer’s disease ,Wnt/β-catenin signaling ,protein phosphatases of type 2A (PP2A) ,amyloid-β ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
Fluoxetine (FLX) is one of the selective serotonin reuptake inhibitors (SSRIs) antidepressants, which could be used to relieve depression and anxiety among AD patients. This study was designed to search for new mechanisms by which fluoxetine could activate Wnt/β-catenin signaling pathway and reduce amyloidosis in AD brain. Fluoxetine was administered via intragastric injection to APP/tau/PS1 mouse model of Alzheimer’s disease (3×Tg-AD) mice for 4 months. In the hippocampus of AD mouse model, there could be observed neuronal apoptosis, as well as an increase in Aβ (amyloid-β) production. Moreover, there is a strong association between down-regulation of Wnt/β-catenin signaling and the alteration of AD pathology. The activity of protein phosphatases of type 2A (PP2A) could be significantly enhanced by the treatment of fluoxetine. The activation of PP2A, caused by fluoxetine, could then play a positive role in raising the level of active β-catenin, and deliver a negative impact in GSK3β activity in the hippocampal tissue. Both the changes mentioned above would lead to the activation of Wnt/β-catenin signaling. Meanwhile, fluoxetine treatment would reduce APP cleavage and Aβ generation. It could also prevent apoptosis in 3×Tg-AD primary neuronal cell, and have protective effects on neuron synapse. These findings imply that Wnt/β-catenin signaling could be a potential target outcome for AD prevention, and fluoxetine has the potential to be a promising drug in both AD prevention and treatment.
- Published
- 2018
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584. On the utility of leg distal compliance for buffering landing impact of legged robots
- Author
-
Jie Chen, Yubin Liu, Gangfeng Liu, and Jie Zhao
- Subjects
Mechanical engineering and machinery ,TJ1-1570 - Abstract
Many legged robots have compliant mechanisms in the distal segments of their legs called distal compliance. One important function of such characteristic is to buffer landing impact at touchdown. However, there is still no general design strategy for it. In particular, nonlinear compliance behaviors are supposed to be more beneficial than linear ones, yet it is open what type of nonlinearity is a good fit. From this perspective, we used a simple spring–mass model performing free drop to investigate the design principles of distal compliance. The model includes damping and preload in spring and realistic limitations on spring compression, therefore gives a straightforward correspondence with actual hardware systems. We confirmed the benefits of using distal compliance over purely stiff structures, in terms of landing impact buffering. By assessing the relative influences of a variety of compliance configurations through numerical simulations, we found that for compliance behaviors of the same average stiffness, nonlinearities had little effect on the impact magnitude (
- Published
- 2017
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585. A Mechatronics-Embedded Pneumatic Soft Modular Robot Powered via Single Air Tube
- Author
-
Yu Zhang, Yubin Liu, Xin Sui, Tianjiao Zheng, Dongyang Bie, Yulin Wang, Jie Zhao, and Yanhe Zhu
- Subjects
soft modular robot ,mechatronics-embedded soft module ,air pressure sharing ,bionic motion ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
Soft modular robots have advantages, including infinite degrees of freedom and various configurations. Most soft robots are actuated by inflating air pressure into their chambers. However, each chamber is connected to a tube that provides the air supply, which incurs drag and intertwining problems that influence the robot’s motion. Moreover, the number of chambers directly affects the deformations and motion capabilities of the robot. Therefore, the crucial issue is the structure of a soft modular robot that can share an air source without reducing the number of chambers and can guarantee the deformations of the robot. In this paper, a novel mechatronics-embedded soft module was designed and manufactured, which has an air supply sharing function. Therefore, the soft modular robot can be powered via a single air tube. In addition, a wireless platform to control the air pressure of the module was built, and an experimental model was established to obtain the relationship between the deformation and pressure of the module. Four experiments were performed under different conditions. The experiments’ results indicate the bending capability of the module. Moreover, hooking object, twisting motion, and bionic gesture experiments demonstrate the validity of the module’s air pressure sharing function. Therefore, the air sharing supply approach proposed in this paper can be used as a reference to solve the tube drag problem of soft modular robots.
- Published
- 2019
- Full Text
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586. Dual-Modal In Vivo Fluorescence/Photoacoustic Microscopy Imaging of Inflammation Induced by GFP-Expressing Bacteria
- Author
-
Yubin Liu, Lei Fu, Mengze Xu, Jun Zheng, and Zhen Yuan
- Subjects
GFP-expressing bacteria ,biosensor ,inflammation/infection ,fluorescence imaging ,photoacoustic microscopy ,Chemical technology ,TP1-1185 - Abstract
In this study, dual-modal fluorescence and photoacoustic microscopy was performed for noninvasive and functional in vivo imaging of inflammation induced by green fluorescent protein (GFP) transfected bacteria in mice ear. Our imaging results demonstrated that the multimodal imaging technique is able to monitor the tissue immunovascular responses to infections with molecular specificity. Our study also indicated that the combination of photoacoustic and fluorescence microscopy imaging can simultaneously track the biochemical changes including the bacterial distribution and morphological change of blood vessels in the biological tissues with high resolution and enhanced sensitivity. Consequently, the developed method paves a new avenue for improving the understanding of the pathology mechanism of inflammation.
- Published
- 2019
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587. Stability of quasi-linear differential equations with transition conditions
- Author
-
Yubin Liu and Weizhen Feng
- Subjects
Differential equations on time scales ,transition conditions ,impulsive differential equations ,stability ,Mathematics ,QA1-939 - Abstract
This paper investigates the stability of quasi-linear differential equations on certain time scales with transition condition (DETC). We establish Sufficient conditions for stability and illustrate our results with examples.
- Published
- 2008
588. SPA: Sparse Photorealistic Animation Using a Single RGB-D Camera
- Author
-
Yubin Li, Leijie Liu, Kun Li, Jingyu Yang, Ronan Boulic, Yu-Kun Lai, Yebin Liu, and Eray Molla
- Subjects
QA75 ,Computer science ,RGB-D camera ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,02 engineering and technology ,photorealistic animation ,Motion capture ,texture synthesis ,Computer graphics (images) ,Marker-less performance capture ,0202 electrical engineering, electronic engineering, information engineering ,Media Technology ,Computer vision ,Electrical and Electronic Engineering ,sparse representation ,Computer animation ,ComputingMethodologies_COMPUTERGRAPHICS ,business.industry ,020207 software engineering ,Animation ,RGB color model ,020201 artificial intelligence & image processing ,Artificial intelligence ,Noise (video) ,business ,Texture synthesis - Abstract
Photorealistic animation is a desirable technique for computer games and movie production. We propose a new method to synthesize plausible videos of human actors with new motions using a single cheap RGB-D camera. A small database is captured in a usual office environment, which happens only once for synthesizing different motions. We propose a marker-less performance capture method using sparse deformation to obtain the geometry and pose of the actor for each time instance in the database. Then, we synthesize an animation video of the actor performing the new motion that is defined by the user. An adaptive model-guided texture synthesis method based on weighted low-rank matrix completion is proposed to be less sensitive to noise and outliers, which enables us to easily create photorealistic animation videos with new motions that are different from the motions in the database. Experimental results on the public data set and our captured data set have verified the effectiveness of the proposed method.
589. Rainfall distribution of five landfalling tropical cyclones in the northwestern Australian region
- Author
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Johnny C. L. Chan, Masami Tokuno, Yubin Li, and Kevin K. W. Cheung
- Subjects
Atmospheric Science ,Rain gauge ,Brightness temperature ,Climatology ,Wind shear ,Front (oceanography) ,Submarine pipeline ,Satellite ,Tropical cyclone ,Oceanography ,Southern Hemisphere ,Geology - Abstract
Rain gauge data, satellite IR brightness temperature and radar-estimated rain rate for five tropical cyclones from the 2005–06 to 2009–10 seasons that made landfall along the northwestern coast of Australia are analysed. It is the first time that the spatial rainfall distribution of landfalling tropical cyclones in the southern hemisphere has been systematically investigated. It is found that the distributions of rainfall are more concentrated in the right side of the track of the landfall tropical cyclones, which is the offshore flow position. Potential mechanisms responsible for this observed asymmetry in rainfall distribution are discussed. These include the tropical cyclone motion direction, deep-tropospheric vertical wind shear and land-sea contrast in surface properties. Topography is considered to have less effect since Western Australia is relatively flat. The rainfall maxima are found in the front and downshear quadrants for these tropical cyclones, which is consistent with previous studies. The changes in vertical wind shear when these tropical cyclones moved to the south are largely attributed to the prevailing environmental flow. Three numerical simulations are performed; one with a realistic land surface, one with all topography removed and one with all land removed. These simulations show that the land surface effects play an important role in determining the asymmetry in rainfall distribution, which explains why in some cases the observed maximum rainfall does not follow closely the vertical wind shear direction when making landfall.
590. Effects of Shenfu injection and its main components on the contraction of isolated rat thoracic aortic rings.
- Author
-
Jinqiang Zhu, Liyuan Kang, Qiaofeng Ye, Guanwei Fan, Yubin Liang, Chen Yan, and John Orgah
- Subjects
Medicine ,Science - Abstract
BACKGROUND AND PURPOSE: Shenfu injection (SFI), derived from the ancient traditional Chinese medicine (Red Radix Ginseng and Radix Aconitum Carmichaeli), has been widely used in the clinical for the treatment of cardiovascular diseases for more than 20 years. The present study aims to investigate the effects of SFI and its main components on the contraction of isolated rat thoracic aorta rings and the potential mechanisms of this action. METHODOLOGY/PRINCIPAL FINDINGS: The isolated rat thoracic aorta rings were initially treated with different concentrations of SFI, Hongshen injection (HSI, mainly containing ginsenoside) or Fupian injection (FPI, mainly containing aconite total alkaloids) separately. The control group was added an equal volume Krebs-Henseleit (K-H) solution. All three injections exhibited no obviously effects on the basal tension of the rings in the resting state. However, in the isolated thoracic aorta rings with intact endothelium, when the rings were first induced by 60 mM potassium chloride (KCl) or 1 µM norepinephrine (NE) to the maximal contraction and then treated with above injections, SFI and HSI significantly inhibited the vasoconstriction induced by KCl or NE. In addition, FPI has a tendency to inhibit KCl-induced vasoconstriction and facilitate NE-induced vasoconstriction, but no significant difference. None of them showed obvious effect on the endothelium denuded vessels. Moreover, this procedure was repeated after pre-incubation of nitric oxide synthase (NOS) inhibitor N(G)-nitro- L-arginine methyl ester (L-NAME), which suppressed the vasorelaxation effect of SFI and HSI. CONCLUSIONS AND IMPLICATIONS: These results demonstrate that both SFI and HSI caused an apparent thoracic aorta relaxation by endothelium-dependent manner, which was associated with eNOS system, while FPI had no detectable vasodilator effect. This suggested that the ginsenoside from red Radix Ginseng may be the main active ingredient of SFI's vasodilator effect.
- Published
- 2013
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591. Photoacoustic Tomography Imaging of the Adult Zebrafish by Using Unfocused and Focused High-Frequency Ultrasound Transducers
- Author
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Yubin Liu, Dongliang Li, and Zhen Yuan
- Subjects
photoacoustic tomography (PAT) ,unfocused and focused transducers ,zebrafish ,contrast ,Technology ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Biology (General) ,QH301-705.5 ,Physics ,QC1-999 ,Chemistry ,QD1-999 - Abstract
The zebrafish model provides an essential platform for the study of human diseases or disorders due to the possession of about 87% homologous genes with human. However, it is still very challenging to noninvasively visualize the structure and function of adult zebrafish based on available optical imaging techniques. In this study, photoacoustic tomography (PAT) was utilized for high-resolution imaging of adult zebrafish by using focused and unfocused high-frequency (10 MHz) ultrasound transducers. We examined and compared the imaging results from the two categories of transducers with in vivo experimental tests, in which we discovered that the unfocused transducer is able to identify the inner organs of adult zebrafish with higher contrast but limited regional resolution, whereas the findings from the focused transducer were with high resolution but limited regional contrast for the recovered inner organs.
- Published
- 2016
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592. Mitigation of the double ITCZ syndrome in BCC-CSM2-MR through improving parameterizations of boundary-layer turbulence and shallow convection.
- Author
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Yixiong Lu, Tongwen Wu, Yubin Li, and Ben Yang
- Subjects
- *
INTERTROPICAL convergence zone , *GENERAL circulation model , *TURBULENCE , *STRATOCUMULUS clouds , *PARAMETERIZATION - Abstract
The spurious double intertropical convergence zone (ITCZ) is one of the most prominent systematic biases in coupled atmosphere-ocean general circulation models (CGCMs), and the underestimated marine stratus over eastern subtropical oceans has been recognized as a possible contributor. Rather than modifying the cloud scheme itself, this study significantly promotes the marine stratus simulation through improving parameterizations of boundary-layer turbulence and shallow convection in the medium-resolution Beijing Climate Center Climate System Model version 2 (BCC-CSM2-MR). The University of Washington moist turbulence scheme is implemented in BCC-CSM2-MR to better represent the stratocumulus, and a decoupling criterion is also introduced to the shallow convection scheme for improving the simulation of the stratocumulus-to-cumulus transition. Results show that the simulated precipitation in the eastern Pacific south of the equator is largely reduced, alleviating the double ITCZ problem. The tropical precipitation asymmetry index increases from -0.024 in the original BCC-CSM2-MR to 0.147 in the revised BCC-CSM2-MR, which is much closer to the observation. The study suggests that improving parameterizations of boundary-layer turbulence and shallow convection is effective for mitigating the double ITCZ syndrome in CGCMs. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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593. HIV-1 gp41 enhances CD44-mediated monocytes migration across Cryptococcus-infected brain endothelial cells
- Author
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S.-H. Huang, H. Cao, Yubin Li, Like Zhang, Min Long, and Xiaolong He
- Subjects
Microbiology (medical) ,Infectious Diseases ,biology ,CD44 ,Cryptococcus ,biology.protein ,lcsh:RC109-216 ,General Medicine ,biology.organism_classification ,Virology ,Hiv 1 gp41 ,lcsh:Infectious and parasitic diseases - Full Text
- View/download PDF
594. Spontaneous mutations in maize pollen are frequent in some lines and arise mainly from retrotranspositions and deletions.
- Author
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Qinghua Wang, Huang, Jun T., Yubin Li, Limei He, Dooner, Hugo K., Wenwei Xiong, and Chunguang Du
- Subjects
- *
DELETION mutation , *CHROMOSOMAL translocation , *BIOLOGICAL variation , *SPOROGENESIS in plants ,CORN pollen - Abstract
While studying spontaneous mutations at the maize bronze (bz) locus, we made the unexpected discovery that specific low-copy number retrotransposons are mobile in the pollen of some maize lines, but not of others. We conducted large-scale genetic experiments to isolate new bz mutations from several Bz stocks and recovered spontaneous stable mutations only in the pollen parent in reciprocal crosses. Most of the new stable bz mutations resulted from either insertions of low-copy number long terminal repeat (LTR) retrotransposons or deletions, the same two classes of mutations that predominated in a collection of spontaneous wx mutations [Wessler S (1997) The Mutants of Maize, pp 385-386]. Similar mutations were recovered at the closely linked sh locus. These events occurred with a frequency of 2-4 × 10-5 in two lines derived fromW22 and in 4Co63, but not at all in B73 or Mo17, two inbreds widely represented in Corn Belt hybrids. Surprisingly, the mutagenic LTR retrotransposons differed in the active lines, suggesting differences in the autonomous element make-up of the lines studied. Some active retrotransposons, like Hopscotch, Magellan, and Bs2, a Bs1 variant, were described previously; others, like Foto and Focou in 4Co63, were not. By high-throughput sequencing of retrotransposon junctions, we established that retrotranposition of Hopscotch, Magellan, and Bs2 occurs genome-wide in the pollen of active lines, but not in the female germline or in somatic tissues. We discuss here the implications of these results, which shed light on the source, frequency, and nature of spontaneous mutations in maize. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
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595. Paper-based cell impedance sensor and its application for cytotoxic evaluation.
- Author
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Chunmei Yu, Qiuhong Wang, Weibo Li, Yubin Li, Shuxian Liu, Ning Bao, and Haiying Gu
- Subjects
ELECTRIC impedance ,ANTINEOPLASTIC agents ,NANORODS ,ARSENIC trioxide ,CYCLOPHOSPHAMIDE - Abstract
Disposable analytical devices for developing sensitive and label-free monitoring of cancerous cells would be attractive for cancer research. Here, paper-based electroanalytical devices based on impedance spectrometry were applied for the study of K562 cells and the toxic effect of anticancer drugs. The proposed device integrating gold nanorods modified ITO electrodes could provide a biocompatible surface for immobilization of living cells maintaining their bioactivity. The impedance results exhibited good correlation to the logarithmic value of cell numbers ranging from 7.5 × 10
2 to 3.9 × 106 cells mL−1 with a detection limit of 500 cells mL−1 . Furthermore, this strategy was used to evaluate the cytotoxic effects of arsenic trioxide and cyclophosphamide. Results obtained by the impedimetric method correlate well with the conventional cell viability assay. Cells exposed to drugs exhibited a prominent reduction of impedance data, showing an inverse dose-dependent relationship. This simple, cost-effective and portable paper-based electrochemical analytical device could provide a new impedance platform for applications in monitoring cell behavior, pharmacological studies and toxicological analyses. [ABSTRACT FROM AUTHOR]- Published
- 2015
- Full Text
- View/download PDF
596. UConvTrans:A Dual-Flow Cardiac Image Segmentation Network by Global and Local Information Integration
- Author
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LI Qing, HUANGFU Yubin, LI Jiangyun, YANG Zhifang, CHEN Peng, WANG Zihan
- Subjects
medical image segmentation ,cardiac magnetic resonance image (mri) ,convolutional neural network (cnn) ,transformer models ,encoder-decoder ,Engineering (General). Civil engineering (General) ,TA1-2040 ,Chemical engineering ,TP155-156 ,Naval architecture. Shipbuilding. Marine engineering ,VM1-989 - Abstract
Cardiac magnetic resonance image (MRI) segmentation has the features such as there is a lot of noise, the target areas are indistinguishable from the background, and the shape of the right ventricle is irregular. Although convolution operations are good at extracting local features, the U-shaped convolutional neural networks (CNN) structure hardly models long-distance dependency between pixels and can not achieve ideal segmentation results on cardiac MRI. To solve these problems, UConvTrans is proposed with a dual-flow U-shaped network by global and local information integration. First, the network applies the CNN branch to extract local features and capture global representations by Transformer branch, which retains local detailed features and suppresses the interference of noise and background features in cardiac MRI. Next, the bidirectional fusion module is proposed to fuse the features extracted by CNN and the Transformer with each other, enhancing the feature expression capability and improving the segmentation accuracy of the right ventricle. Besides, the parameters of network can be set flexibly because the transformer structure in the proposed method does not require pre-trained weights. The proposed method also strikes a better balance between precision and efficiency, which is evaluated on the MICCAI 2017 ACDC dataset. The results show that the network outperforms U-Net by 1.13% average dice coefficient while the parameter amount and the floating point operations are only 10% and 8% of the U-Net. Finally, the proposed method achieves a dice coefficient of 92.42% for the right ventricle, 91.64% for the myocardium, and 95.06% for the left ventricle respectively and wins the first place in the myocardium and left ventricle on test set.
- Published
- 2023
- Full Text
- View/download PDF
597. Gap-Filling of Turbulent Heat Fluxes over Rice-Wheat-Rotation Croplands Using the Random Forest Model.
- Author
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Jianbin Zhang, Zexia Duan, Shaohui Zhou, Yubin Li, and Zhiqiu Gao
- Subjects
- *
RANDOM forest algorithms , *EDDY flux , *HEAT flux , *STANDARD deviations , *WIND speed , *SOLAR radiation - Abstract
This study investigated the accuracy of the Random Forest (RF) model in gap-filling the sensible (H) and latent heat (LE) fluxes, by using the observation data collected at a site over rice-wheat-rotation croplands in Shouxian County of eastern China from 15 July 2015 to 24 April 2019. Firstly, the variable significances of the machine learning (ML) model's five input variables, including the net radiation (Rn), winds speed (WS), temperature (T), relative humidity (RH), and air pressure (P), were examined, and it was found that Rn accounted for 78 % and 76 % of the total variable significance in H and LE calculating, respectively, showing that it was the most important input variable. Secondly, the RF model's accuracy with the five-variable (Rn, WS, T, RH, P) input combination was evaluated, and the results showed that the RF model could reliably gap-fill the H and LE with mean absolute errors (MAEs) of 5.88 Wm-2 and 20.97 Wm-2, and root mean square errors (RMSEs) of 10.67 Wm-2 and 29.46 Wm-2, respectively. Thirdly, 4-variable input combinations were tested, and it was found that the best input combination was (Rn, WS, T, P) with the MAE of H and LE reduced by 12.65 % and 7.12 %, respectively, after removing RH from the input list. At last, through the Taylor diagram, H and LE gap-filling accuracy of the RF model, the support vector machine (SVM) model, the k-nearest neighbor (KNN) model, and the gradient boosting decision tree (GBDT) model was inter-compared, and the statistical metrics showed that RF was the most accurate for both H and LE gap-filling, while the LR and KNN model performed the worst for H and LE gap-filling, respectively. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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- View/download PDF
598. Plant evolution and environmental adaptation unveiled by long-read whole-genome sequencing of Spirodela.
- Author
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Dong An, Yong Zhou, Changsheng Li, Qiao Xiao, Tao Wang, Yating Zhang, Yongrui Wu, Yubin Li, Dai-Yin Chao, Messing, Joachim, and Wenqin Wang
- Subjects
- *
PLANT evolution , *SMALL interfering RNA , *COMPLEMENTARY DNA , *ANTISENSE DNA , *PEPTIDE antibiotics - Abstract
Aquatic plants have to adapt to the environments distinct from where land plants grow. A critical aspect of adaptation is the dynamics of sequence repeats, not resolved in older sequencing platforms due to incomplete and fragmented genome assemblies from short reads. Therefore, we used PacBio long-read sequencing of the Spirodela polyrhiza genome, reaching a 44-fold increase of contiguity with an N50 (a median of contig lengths) of 831 kb and filling 95.4% of gaps left from the previous version. Reconstruction of repeat regions indicates that sequentially nested long terminal repeat (LTR) retrotranspositions occur early in monocot evolution, featured with both prokaryote-like gene-rich regions and eukaryotic repeat islands. Protein-coding genes are reduced to 18,708 gene models supported by 492,435 high-quality full-length PacBio complementary DNA (cDNA) sequences. Different from land plants, the primitive architecture of Spirodela's adventitious roots and lack of lateral roots and root hairs are consistent with dispensable functions of nutrient absorption. Disease-resistant genes encoding antimicrobial peptides and dirigent proteins are expanded by tandem duplications. Remarkably, disease-resistant genes are not only amplified, but also highly expressed, consistent with low levels of 24-nucleotide (nt) small interfering RNA (siRNA) that silence the immune system of land plants, thereby protecting Spirodela against a wide spectrum of pathogens and pests. The long-read sequence information not only sheds light on plant evolution and adaptation to the environment, but also facilitates applications in bioenergy and phytoremediation. [ABSTRACT FROM AUTHOR]
- Published
- 2019
- Full Text
- View/download PDF
599. Efficient hydrogen evolution electrocatalysts from LixMoS2 nanoparticles on three-dimensional substrate.
- Author
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Qiangbin Yang, Yi He, Yi Fan, Xi Chen, and Yubin Li
- Subjects
- *
HYDROGEN , *ELECTROCATALYSTS , *NONMETALS , *CATALYSTS , *NANOPARTICLES - Abstract
Molybdenum disulfide (MoS2), as a promising catalyst, has been widely investigated for hydrogen evolution reaction (HER). But the low density and poor reactivity of active sites, poor electrical transport, and inefficient electrical contact to the catalyst, leads to the modest performance. In this work, we demonstrate an effective route to overcome those issues by decorating the conductive LixMoS2 nanoparticles on the three-dimensional carbon fiber paper (CFP) through combining hydrothermal method and lithium intercalation. Thus, the dense LixMoS2 nanoparticles of the surface can provide the large number of exposed active sites, the highly-conductive LixMoS2 nanoparticles and CFP substrate can facilitate the transfer of electron not only between the LixMoS2 nanoparticles and CFP, but also between the whole sample and current collector, and the porous networked structure can enable the diffusion and penetration of electrolyte. Prompted by those advantage, the as-prepared samples exhibit outstanding HER catalytic activity with the small Tafel slope of 62 mv dec−1 and the low overpotential of −115.6 mV vs RHE at an electrocatalytic current density of 10 mA cm−2. Chronoamperometric current test for 10 h confirms the long-term stability of the catalyst. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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- View/download PDF
600. Integrating Data of ASTER and Landsat-8 OLI (AO) for Hydrothermal Alteration Mineral Mapping in Duolong Porphyry Cu-Au Deposit, Tibetan Plateau, China.
- Author
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Tingbin Zhang, Guihua Yi, Hongmei Li, Ziyi Wang, Juxing Tang, Kanghui Zhong, Yubin Li, Qin Wang, and Xiaojuan Bie
- Subjects
- *
ASTER (Advanced spaceborne thermal emission & reflection radiometer) , *LANDSAT satellites , *HYDROTHERMAL alteration , *PORPHYRY - Abstract
One of the most important characteristics of porphyry copper deposits (PCDs) is the type and distribution pattern of alteration zones which can be used for screening and recognizing these deposits. Hydrothermal alteration minerals with diagnostic spectral absorption properties in the visible and near-infrared (VNIR) through the shortwave infrared (SWIR) regions can be identified by multispectral and hyperspectral remote sensing data. Six Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER) bands in SWIR have been shown to be effective in the mapping of Al-OH, Fe-OH, Mg-OH group minerals. The five VNIR bands of Landsat-8 (L8) Operational Land Imager (OLI) are useful for discriminating ferric iron alteration minerals. In the absence of complete hyperspectral coverage area, an opportunity, however, exists to integrate ASTER and L8-OLI (AO) to compensate each other's shortcomings in covering area for mineral mapping. This study examines the potential of AO data in mineral mapping in an arid area of the Duolong porphyry Cu-Au deposit(Tibetan Plateau in China) by using spectral analysis techniques. Results show the following conclusions: (1) Combination of ASTER and L8-OLI data (AO) has more mineral information content than either alone; (2) The Duolong PCD alteration zones of phyllic, argillic and propylitic zones are mapped using ASTER SWIR bands and the iron-bearing mineral information is best mapped using AO VNIR bands; (3) The multispectral integration data of AO can provide a compensatory data of ASTER VNIR bands for iron-bearing mineral mapping in the arid and semi-arid areas. [ABSTRACT FROM AUTHOR]
- Published
- 2016
- Full Text
- View/download PDF
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