573 results on '"FETAL DNA"'
Search Results
552. Detection of fetal DNA in trans-cervical swabs from first trimester pregnancy by gene amplification: a new route to prenatal diagnosis?
- Author
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A. Kratzer, R. Zimmerman, W. Bär, and Albert Huch
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medicine.medical_specialty ,Fetal dna ,Cell-free fetal DNA ,business.industry ,Obstetrics ,Gene duplication ,Obstetrics and Gynecology ,Medicine ,Prenatal diagnosis ,Trans-acting ,First trimester pregnancy ,business - Published
- 1993
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553. Detection of fetal DNA in trans -cervical swabs from first trimester pregnancies by gene amplification: A new route to prenatal diagnosis?
- Author
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David Miller, Griffith-Jones, Judith N. Bulmer, R. J. Lilford, and J Scott
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medicine.medical_specialty ,First trimester ,Fetal dna ,Cell-free fetal DNA ,Obstetrics ,business.industry ,Gene duplication ,medicine ,Obstetrics and Gynecology ,Prenatal diagnosis ,General Medicine ,Trans-acting ,business - Published
- 1993
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554. Fetal DNA in maternal plasma in preeclamptic pregnancies.
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Vlková B, Turňa J, and Celec P
- Subjects
- Female, Humans, Pregnancy, DNA blood, Pre-Eclampsia blood
- Abstract
Cell-free fetal DNA present in maternal circulation has revolutionized non-invasive prenatal diagnosis of genetic diseases. In preeclampsia, the quantity of fetal DNA in maternal plasma has been studied and found to be higher in comparison to healthy pregnant women. Whether the quantity of fetal DNA can be used as a reliable predictive biomarker of preeclampsia is currently uncertain. This is a systematic review on studies quantifying fetal DNA in preeclamptic pregnancies. Using a PubMed search 22 studies were identified. In all of them, elevated levels of fetal DNA in maternal plasma in preeclampsia were found. In some of the studies, the higher concentration of fetal DNA was observed before the onset of clinical symptoms. This shows that fetal DNA levels might have a potential informative value as an early diagnostic biomarker of preeclampsia. However, in most of the studies important data are missing and there is an enormous variability in the reported results between the studies. From the available data it is currently not possible to perform a meta-analysis due to the variation between studies. If once fetal DNA should be used as a marker for determining preeclampsia at early stage, it is necessary to reduce these variations via standardized protocols for the quantification of cell-free fetal DNA as well as its reporting in the publications.
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- 2015
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555. Non-Invasive Prenatal RHD Genotyping Using Cell-Free Fetal DNA from Maternal Plasma: An Italian Experience.
- Author
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Picchiassi E, Di Renzo GC, Tarquini F, Bini V, Centra M, Pennacchi L, Galeone F, Micanti M, and Coata G
- Abstract
Background: This study assessed the diagnostic accuracy of a non-invasive approach to fetal RHD genotyping using cell-free fetal DNA in maternal plasma and a combination of methodological strategies., Methods: Real-time PCR (qPCR) was performed on 216 RhD-negative women between weeks 10+0 and 14+6 of gestation (1st qPCR). qPCR was repeated (2nd qPCR) to increase the amount of each sample for analysis, on 95 plasma aliquots that were available from first trimester blood collection (group 1) and on 13 samples that were collected between weeks 18+0 and 25+6 of gestation (group 2). qPCR was specific for exons 5 and 7 of the RHD gene (RHD5 and RHD7). The results were interpreted according to the number of positive replicates of both exons., Results: 1st qPCR: diagnostic accuracy was of 93.3%. Diagnostic accuracy increased from 90.5% (1st qPCR) to 93.7% (2nd qPCR) in group 1 and from 84.6% (1st qPCR) to 92.3% (2nd qPCR) in group 2. These increments were not statistically significant., Conclusion: Our approach to RHD genotyping in early pregnancy yielded high diagnostic accuracy. Increasing the amount of DNA analyzed in each sample did not improve significantly the diagnostic accuracy of the test.
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- 2015
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556. Transabdominal coelocentesis as early source of fetal DNA for chromosomal and molecular diagnosis.
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Pietropolli A, Vicario R, Peconi C, Zampatti S, Quitadamo MC, Capogna MV, Ragazzo M, Nardone AM, Postorivo D, Spitalieri P, Sarta S, Ratto F, Novelli G, Sangiuolo F, Piccione E, and Giardina E
- Subjects
- Adult, Comparative Genomic Hybridization, Female, Genetic Testing, Humans, Polymerase Chain Reaction, Pregnancy, Prospective Studies, Young Adult, Paracentesis methods, Prenatal Diagnosis methods
- Abstract
This study reports a comparative analysis between results of transabdominal coelocentesis and traditional invasive procedure in order to assess the usefulness of coelocentesis as a source of fetal DNA for molecular and chromosomal analysis. A number of 28 women were included in the study. A successful sampling of coelomic fluid was obtained in 25 women by transabdominal procedure. A positive amplification of DNA with QF-PCR techniques was obtained in 90% of cases, while 10% of cases failed to reveal interpretable results. Although all samples were cultured, the growth rate was not sufficient to determine karyotypes within 2 weeks. Five samples were selected to be analyzed by array-based comparative genomic hybridization (a-CGH) but the interpretation of these results was difficult and ambiguous. Our results suggest that transabdominal coelocentesis is suitable for the detection of single DNA variation and for QF-PCR analysis, while further experiments are needed to develop optimized protocols for traditional karyotyping and array-analysis.
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- 2014
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557. Detection of fetal sex chromosome aneuploidy by massively parallel sequencing of maternal plasma DNA: initial experience in a Chinese hospital.
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Yao H, Jiang F, Hu H, Gao Y, Zhu Z, Zhang H, Wang Y, Guo Y, Liu L, Yuan Y, Zhou L, Wang J, Du B, Qu N, Zhang R, Dong Y, Xu H, Chen F, Jiang H, Liu Y, Zhang L, Tian Z, Liu Q, Zhang C, Pan X, Yang S, Zhao L, Wang W, and Liang Z
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- Adolescent, Adult, China, Chromosome Disorders diagnosis, Chromosomes, Human, Pair 13, Chromosomes, Human, Pair 18, Down Syndrome diagnosis, Feasibility Studies, Female, Genetic Counseling, Genetic Testing methods, Humans, Middle Aged, Pregnancy, Retrospective Studies, Trisomy diagnosis, Trisomy 13 Syndrome, Trisomy 18 Syndrome, Young Adult, Aneuploidy, Chromosomes, Human, X, Chromosomes, Human, Y, High-Throughput Nucleotide Sequencing, Maternal Serum Screening Tests, Sequence Analysis, DNA methods, Sex Chromosome Aberrations
- Abstract
Objectives: To evaluate the performance of a massively parallel sequencing (MPS)-based test in detecting fetal sex chromosome aneuploidy (SCA) and to present a comprehensive clinical counseling protocol for SCA-positive patients., Methods: This was a retrospective study in a large patient cohort of 5950 singleton pregnancies which underwent MPS-based testing as a prenatal screening test for trisomies 21, 18 and 13, with X and Y chromosomes as secondary findings, in Southwest Hospital in China. MPS-based SCA-positive women were offered the choice of knowing whether their SCA results were positive and those who did commenced a two-stage post-test clinical counseling protocol. In Stage 1, general information about SCA was given, and women were given the option of invasive testing for confirmation of findings; in Stage 2, those who had chosen to undergo invasive testing were informed about the specific SCA affecting their fetus and their management options., Results: Thirty-three cases were classified as SCA-positive by MPS-based testing. After Stage 1 of the two-stage post-test clinical counseling session, 33 (100%) of these pregnant women chose to know the screening test results, and 25 (75.76%) underwent an invasive diagnostic procedure and karyotype analysis, in one of whom karyotyping failed. In thirteen cases, karyotyping confirmed the MPS-based test results (two X0 cases, seven XXX cases, three XXY cases and one XYY case), giving a positive predictive value of 54.17% (13/24 cases confirmed by karyotyping). After post-test clinical counseling session Stage 2, seven women chose to terminate the pregnancy: one X0 case, two XXX cases, the three XXY cases and the single XYY case. Six women decided to continue with pregnancy: one X0 case and five XXX cases., Conclusion: Our study showed the feasibility of clinical application of the MPS-based test in the non-invasive detection of fetal SCA. Together with a two-stage post-test clinical counseling protocol, it leads to a well-informed decision-making procedure., (Copyright © 2014 ISUOG. Published by John Wiley & Sons Ltd.)
- Published
- 2014
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558. Non-invasive prenatal testing for fetal chromosomal abnormalities by low-coverage whole-genome sequencing of maternal plasma DNA: review of 1982 consecutive cases in a single center.
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Lau TK, Cheung SW, Lo PS, Pursley AN, Chan MK, Jiang F, Zhang H, Wang W, Jong LF, Yuen OK, Chan HY, Chan WS, and Choy KW
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- Chromosome Disorders blood, Chromosome Disorders genetics, Chromosomes, Human, Pair 13 genetics, Chromosomes, Human, Pair 18 genetics, DNA Methylation, Down Syndrome blood, Down Syndrome genetics, Female, Genetic Markers, Genetic Testing methods, Humans, Infant, Newborn, Karyotyping, Maternal Age, Polymorphism, Genetic, Pregnancy, Reproducibility of Results, Sequence Analysis, DNA methods, Trisomy genetics, Trisomy 13 Syndrome, Trisomy 18 Syndrome, Chromosome Disorders diagnosis, DNA blood, Down Syndrome diagnosis, Mothers, Prenatal Diagnosis methods, Trisomy diagnosis
- Abstract
Objective: To review the performance of non-invasive prenatal testing (NIPT) by low-coverage whole-genome sequencing of maternal plasma DNA at a single center., Methods: The NIPT result and pregnancy outcome of 1982 consecutive cases were reviewed. NIPT was based on low coverage (0.1×) whole-genome sequencing of maternal plasma DNA. All subjects were contacted for pregnancy and fetal outcome., Results: Of the 1982 NIPT tests, a repeat blood sample was required in 23 (1.16%). In one case, a conclusive report could not be issued, probably because of an abnormal vanished twin fetus. NIPT was positive for common trisomies in 29 cases (23 were trisomy 21, four were trisomy 18 and two were trisomy 13); all were confirmed by prenatal karyotyping (specificity=100%). In addition, 11 cases were positive for sex-chromosomal abnormalities (SCA), and nine cases were positive for other aneuploidies or deletion/duplication. Fourteen of these 20 subjects agreed to undergo further investigations, and the abnormality was found to be of fetal origin in seven, confined placental mosaicism (CPM) in four, of maternal origin in two and not confirmed in one. Overall, 85.7% of the NIPT-suspected SCA were of fetal origin, and 66.7% of the other abnormalities were caused by CPM. Two of the six cases suspected or confirmed to have CPM were complicated by early-onset growth restriction requiring delivery before 34 weeks. Fetal outcome of the NIPT-negative cases was ascertained in 1645 (85.15%). Three chromosomal abnormalities were not detected by NIPT, including one case each of a balanced translocation, unbalanced translocation and triploidy. There were no known false negatives involving the common trisomies (sensitivity=100%)., Conclusions: Low-coverage whole-genome sequencing of maternal plasma DNA was highly accurate in detecting common trisomies. It also enabled the detection of other aneuploidies and structural chromosomal abnormalities with high positive predictive value., (Copyright © 2013 ISUOG. Published by John Wiley & Sons Ltd.)
- Published
- 2014
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559. Non-invasive prenatal testing for fetal sex determination: is ultrasound still relevant?
- Author
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Colmant C, Morin-Surroca M, Fuchs F, Fernandez H, and Senat MV
- Subjects
- Adrenal Hyperplasia, Congenital diagnosis, Adult, Chorionic Villi Sampling adverse effects, DNA blood, Female, Genetic Diseases, X-Linked diagnosis, Humans, Male, Pregnancy, Pregnancy Trimester, First, SOXB1 Transcription Factors genetics, Sensitivity and Specificity, Ultrasonography, Prenatal, Prenatal Diagnosis methods, Sex Determination Analysis methods
- Abstract
Early prenatal diagnosis of fetal sex is necessary to optimize pregnancy management in families known to be at risk of some heritable disorders. The demonstration of cell-free fetal DNA (cffDNA) in the mother's blood has made it possible to identify Y chromosome sequences in maternal blood and to determine fetal sex noninvasively, during the first trimester. This procedure can significantly reduce the number of invasive procedures for women with fetuses at risk of sex-linked diseases and optimize the management of these pregnancies. Fetal sex can be diagnosed by ultrasound with the same sensitivity and specificity, but later in pregnancy. We performed a review of the published literature evaluating the use of cffDNA and ultrasound for prenatal determination of fetal sex during the first trimester of pregnancy. We present the feasibility of the two methods and their impact on clinical practice. We applied a sensitive search of multiple bibliographic databases including Pubmed (MEDLINE), EMBASE, the Cochrane Library and Web of science between 1998 and 2013. Sixteen reports of the determination of fetal sex in maternal blood and 13 reports of the determination by ultrasound met our inclusion criteria. We found a sensitivity and specificity of nearly 100% from 8 weeks of gestation for cffDNA and from 13 weeks of gestation for ultrasound respectively. Based on this review, we conclude that fetal sex can be determined with a high level of accuracy by analyzing cffDNA and at an earlier gestation than ultrasound. Ten years after the first feasibility study, the French National Authority for Health (HAS) released a technological assessment report on the determination of fetal sex in maternal blood, which has resulted in validating this test for reimbursement by the national health insurance fund for the following indications: X-linked recessive disease and congenital adrenal hyperplasia., (Copyright © 2013. Published by Elsevier Ireland Ltd.)
- Published
- 2013
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560. Non-invasive prenatal testing for aneuploidy: current status and future prospects.
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Benn P, Cuckle H, and Pergament E
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- Biomarkers metabolism, Chromosomes, Human, Pair 13, Female, Genetic Counseling trends, Genetic Testing trends, Gestational Age, Humans, Infant, Newborn, Maternal Age, Nuchal Translucency Measurement trends, Personal Autonomy, Pregnancy, Risk Factors, Trisomy 13 Syndrome, Ultrasonography, Prenatal, Chorionic Gonadotropin, beta Subunit, Human blood, Chromosome Disorders diagnosis, Down Syndrome diagnosis, Pregnancy-Associated Plasma Protein-A metabolism, Prenatal Diagnosis trends, Trisomy diagnosis, alpha-Fetoproteins metabolism
- Abstract
Non-invasive prenatal testing (NIPT) for aneuploidy using cell-free DNA in maternal plasma is revolutionizing prenatal screening and diagnosis. We review NIPT in the context of established screening and invasive technologies, the range of cytogenetic abnormalities detectable, cost, counseling and ethical issues. Current NIPT approaches involve whole-genome sequencing, targeted sequencing and assessment of single nucleotide polymorphism (SNP) differences between mother and fetus. Clinical trials have demonstrated the efficacy of NIPT for Down and Edwards syndromes, and possibly Patau syndrome, in high-risk women. Universal NIPT is not cost-effective, but using NIPT contingently in women found at moderate or high risk by conventional screening is cost-effective. Positive NIPT results must be confirmed using invasive techniques. Established screening, fetal ultrasound and invasive procedures with microarray testing allow the detection of a broad range of additional abnormalities not yet detectable by NIPT. NIPT approaches that take advantage of SNP information potentially allow the identification of parent of origin for imbalances, triploidy, uniparental disomy and consanguinity, and separate evaluation of dizygotic twins. Fetal fraction enrichment, improved sequencing and selected analysis of the most informative sequences should result in tests for additional chromosomal abnormalities. Providing adequate prenatal counseling poses a substantial challenge given the broad range of prenatal testing options now available., (Copyright © 2013 ISUOG. Published by John Wiley & Sons, Ltd.)
- Published
- 2013
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561. Prenatal diagnosis of hemoglobinopathies
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Blanche P. Alter
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medicine.medical_specialty ,Fetus ,Pregnancy ,Fetal dna ,Obstetrics ,business.industry ,Thalassemia ,Prenatal diagnosis ,Hematology ,Disease ,medicine.disease ,Oncology ,Cell-free fetal DNA ,Pediatrics, Perinatology and Child Health ,medicine ,Globin ,business - Abstract
Prenatal testing for hemoglobinopathies has been available since 1974, using fetal blood samples, and since 1978, using fetal DNA. Close to 2000 cases were studied by analysis of fetal globin synthesis, and approximately 100 by restriction enzyme techniques. More than 20 centers worldwide are performing these tests. The safety and reliability of these tests are now clear, and they have a major role in the counselling of families where there is a risk of sickle cell disease or thalassemia.
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- 1983
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562. Successful Noninvasive Trisomy 18 Detection Using Single Molecule Sequencing
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Phebe N. Adama van Scheltema, R.F. Suijkerbuijk, Lennart Johansson, Sahila Balkassmi, Jessica M.E. van den Oever, Richard J. Sinke, Egbert Bakker, Birgit Sikkema-Raddatz, Mariëtte J.V. Hoffer, Elles M. J. Boon, Human genetics, and Ethical, Legal, Social Issues in Genetics (ELSI)
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FETAL DNA ,Clinical Biochemistry ,Sequencing data ,Aneuploidy ,Prenatal diagnosis ,Trisomy ,Biology ,Sensitivity and Specificity ,Chromosomes ,TROPHOBLAST ,Data sequences ,medicine ,PREGNANCIES ,Humans ,PRENATAL-DIAGNOSIS ,MATERNAL PLASMA ,Massive parallel sequencing ,Pair 18 ,Plasma samples ,ANEUPLOIDY ,Biochemistry (medical) ,medicine.disease ,Molecular biology ,PCR ,Chromosomes, Human, Pair 18 ,GC-content ,Human - Abstract
BACKGROUND Noninvasive trisomy 21 detection performed by use of massively parallel sequencing is achievable with high diagnostic sensitivity and low false-positive rates. Detection of fetal trisomy 18 and 13 has been reported as well but seems to be less accurate with the use of this approach. The reduced accuracy can be explained by PCR-introduced guanine-cytosine (GC) bias influencing sequencing data. Previously, we demonstrated that sequence data generated by single molecule sequencing show virtually no GC bias and result in a more pronounced noninvasive detection of fetal trisomy 21. In this study, single molecule sequencing was used for noninvasive detection of trisomy 18 and 13. METHODS Single molecule sequencing was performed on the Helicos platform with free DNA isolated from maternal plasma from 11 weeks of gestation onward (n = 17). Relative sequence tag density ratios were calculated against male control plasma samples and results were compared to those of previous karyotyping. RESULTS All trisomy 18 fetuses were identified correctly with a diagnostic sensitivity and specificity of 100%. However, low diagnostic sensitivity and specificity were observed for fetal trisomy 13 detection. CONCLUSIONS We successfully applied single molecule sequencing in combination with relative sequence tag density calculations for noninvasive trisomy 18 detection using free DNA from maternal plasma. However, noninvasive trisomy 13 detection was not accurate and seemed to be influenced by more than just GC content.
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563. Quantitative Analysis of Fetal DNA in Maternal Plasma and Serum: Implications for Noninvasive Prenatal Diagnosis
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James S. Wainscoat, Philip J. Johnson, Tse N. Leung, N. Magnus Hjelm, Christopher J. Haines, Y.M. Dennis Lo, Tze K. Lau, Mark S.C. Tein, Allan M. Z. Chang, and Priscilla M.K. Poon
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Male ,medicine.medical_specialty ,medicine.medical_treatment ,Prenatal diagnosis ,Biology ,Polymerase Chain Reaction ,law.invention ,Andrology ,Quantitative PCR ,Fetus ,law ,Pregnancy ,Fetal DNA ,Internal medicine ,medicine ,Genetics ,Humans ,Genetics(clinical) ,Maternal-Fetal Exchange ,Genetics (clinical) ,Polymerase chain reaction ,In vitro fertilisation ,Sex Chromosomes ,DNA ,Maternal plasma ,medicine.disease ,Real-time polymerase chain reaction ,Endocrinology ,Cell-free fetal DNA ,Gestation ,Female ,Maternal serum ,Sex-linked disorders ,Research Article - Abstract
Summary We have developed a real-time quantitative PCR assay to measure the concentration of fetal DNA in maternal plasma and serum. Our results show that fetal DNA is present in high concentrations in maternal plasma, reaching a mean of 25.4 genome equivalents/ml (range 3.3–69.4) in early pregnancy and 292.2 genome equivalents/ml (range 76.9–769) in late pregnancy. These concentrations correspond to 3.4% (range 0.39%–11.9%) and 6.2% (range 2.33%–11.4%) of the total plasma DNA in early and late pregnancy, respectively. Sequential follow-up study of women who conceived by in vitro fertilization shows that fetal DNA can be detected in maternal serum as early as the 7th wk of gestation and that it then increases in concentration as pregnancy progresses. These data suggest that fetal DNA can be readily detected in maternal plasma and serum and may be a valuable source of material for noninvasive prenatal diagnosis.
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564. Tracking fetal development through molecular analysis of maternal biofluids
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Diana W. Bianchi and Andrea G. Edlow
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medicine.medical_specialty ,Amniotic fluid ,Genotype ,Physiology ,Aneuploidy ,Chorionic villus sampling ,Prenatal diagnosis ,Biology ,Article ,Fetal DNA ,Pregnancy ,Nucleic Acids ,Prenatal Diagnosis ,Placenta ,Internal medicine ,medicine ,Fetal mRNA ,Humans ,Neural Tube Defects ,Molecular Biology ,Fetus ,medicine.diagnostic_test ,Amniotic fluid transcriptome ,Fetal development ,Amniotic Fluid ,medicine.disease ,medicine.anatomical_structure ,Endocrinology ,embryonic structures ,Amniocentesis ,Molecular Medicine ,Female ,Noninvasive prenatal diagnosis - Abstract
Current monitoring of fetal development includes fetal ultrasonography, chorionic villus sampling or amniocentesis for chromosome analysis, and maternal serum biochemical screening for analytes associated with aneuploidy and open neural tube defects. Over the last 15years, significant advances in noninvasive prenatal diagnosis (NIPD) via cell-free fetal (cff) nucleic acids in maternal plasma have resulted in the ability to determine fetal sex, RhD genotype, and aneuploidy. Cff nucleic acids in the maternal circulation originate primarily from the placenta. This contrasts with cff nucleic acids in amniotic fluid, which derive from the fetus, and are present in significantly higher concentrations than in maternal blood. The fetal origin of cff nucleic acids in the amniotic fluid permits the acquisition of real-time information about fetal development and gene expression. This review seeks to provide a comprehensive summary of the molecular analysis of cff nucleic acids in maternal biofluids to elucidate mechanisms of fetal development, physiology, and pathology. This article is part of a Special Issue entitled: Molecular Genetics of Human Reproductive Failure.
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565. Detection of Y STR markers of male fetal dna in maternal circulation.
- Author
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Nair SP, Peter S, Pillay VV, Remya UM, Krishnaprasad R, and Rajammal B
- Abstract
Background: Circulating fetal cells and cell free DNA in the maternal blood has been shown to help in prenatal diagnosis of genetic disorders without relying on invasive procedures leading to significant risk of pregnancy loss., Aim: The current study was undertaken to detect the male fetal population using Y STR markers DYS 19, DYS 385 and DYS 392 and also to study the extent of persistence of fetal DNA in the mother following delivery., Materials and Methods: Blinded study was conducted on 50 mothers delivering male and female babies. Cellular and cell free DNA was extracted from maternal and fetal cord blood and amplified for Y STR markers by PCR., Results: The amplification sensitivity of Y specific STR, DYS19 was 100% (22/22) in the male fetal DNA samples. The incidence of other STRs, i.e., DYS385 and DYS392 were 91% (20/22) each. Analysis of results revealed that thirteen of the twenty six women had detectable male fetal DNA at the time of delivery. However fetal DNA was not detectable twenty four hours after delivery., Conclusion: Preliminary results show that the separation of fetal cell-free DNA in the maternal circulation is a good low-cost approach for the future development of novel strategies to provide non-invasive techniques for early prenatal diagnosis.
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- 2007
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566. In utero sister chromatid exchange analysis for detection of transplacental mutagens
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Gaither D. Bynum, Gerhard C. Senula, Edward L. Schneider, and David Kram
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Fetus ,Multidisciplinary ,Fetal dna ,DNA damage ,food and beverages ,Transplacental ,Sister chromatid exchange ,Biology ,Chromatids ,Molecular biology ,Mice ,Teratogens ,In utero ,Pregnancy ,Sister chromatids ,Animals ,Pregnancy, Animal ,Female ,Crossing Over, Genetic ,Metaphase ,Maternal-Fetal Exchange ,Mutagens - Abstract
FETAL exposure to agents which damage DNA can result in birth anomalies, cancer and inherited abnormalities. In the present report we describe a new approach for the detection of fetal DNA damage through the enumeration of sister chromatid exchanges (SCE) in mouse fetal chromosomes. SCE can be identified as reciprocal exchanges of fluorescent intensities betweeen sister chromatids in metaphase cells which have divided twice in the presence of bromodeoxyuride (BrdU) (Fig. 1). Analysis of SCE has been shown to be a sensitive and reproducible means of detecting chemical mutagens and carcinogens1–9.
- Published
- 1979
567. Feasibility of prenatal diagnosis of beta-thalassaemia with synthetic DNA probes in two Mediterranean populations
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R. B. Wallace, J. S. Wainscoat, Gemino Fiorelli, John M. Old, David J. Weatherall, Maurizio Sampietro, and S. L. Thein
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medicine.medical_specialty ,Fetal dna ,Oligonucleotides ,Prenatal diagnosis ,β thalassaemia ,Fetal blood sampling ,Synthetic DNA ,Pregnancy ,hemic and lymphatic diseases ,Prenatal Diagnosis ,medicine ,Genes, Synthetic ,Humans ,Genetics ,Base Sequence ,Obstetrics ,Oligonucleotide ,business.industry ,Nucleic Acid Hybridization ,General Medicine ,medicine.disease ,Thalassaemias ,Globins ,Hemoglobinopathy ,Italy ,Cyprus ,Autoradiography ,Thalassemia ,Female ,business - Abstract
A feasibility study in two Mediterranean populations showed that prenatal diagnosis of β-thalassaemia with a limited number of synthetic oligonucleotide probes would have been possible in about 70% of cases. To provide a comprehensive programme of prenatal diagnosis for the thalassaemias it would be necessary, in most populations, to combine fetal DNA analysis with fetal blood sampling and globin-chain synthesis studies.
- Published
- 1985
568. First Trimester Prenatal Diagnosis of Metabolic Diseases
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Y. Dumez, L. Castelnau, F. Thepot, L. Poenaru, and J. Boué
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Gynecology ,medicine.medical_specialty ,Pregnancy ,Fetal dna ,business.industry ,Chromosome ,Prenatal diagnosis ,medicine.disease ,Metachromatic leukodystrophy ,First trimester ,medicine.anatomical_structure ,medicine ,Gestation ,Chorionic villi ,business - Abstract
Chorionic biopsies obtained at 6–12 weeks of gestation represent a new approach in prenatal diagnosis which enables a decision on whether to terminate a pregnancy for genetic reasons to be made by the 10th–12th week of pregnancy (Kazy et al. 1982; Kaplan et al. 1983). This method has been employed for the early prenatal determination of fetal sex (Gosden et al. 1982), diagnosis of chromosome abnormalities (Brambati and Simoni 1983), fetal DNA analysis (Kaplan et al. 1983; Gosden et al. 1982; Elles et al. 1983; Old et al. 1982; Goossens et al. 1983), and the diagnosis of enzyme defects (Kazy et al. 1982; Pergament et al. 1983; Tsvetkova et al. 1983; Poenaru et al. 1984 a).
- Published
- 1985
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569. Extraction of DNA from chorionic villi
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R. Quaife and D. T. Y. Liu
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Pregnancy ,Fetal dna ,Prenatal diagnosis ,Biology ,medicine.disease ,Andrology ,First trimester ,chemistry.chemical_compound ,medicine.anatomical_structure ,chemistry ,medicine ,Chorionic villi ,Gestation ,DNA - Abstract
Antenatal diagnosis by DNA analysis is almost ten years old (Kan et al., 1976; Orkin et a1.,1978; Kan and Dozy, 1978). These analyses used cultured amniocytes as the source of fetal DNA. Cultures are established at about the sixteenth week of pregnancy and some two to three weeks are needed to allow the cells to replicate so that there are sufficient to enable DNA to be extracted in usable quantities. The analysis of the DNA obtained in this way takes perhaps a week (although this may be reduced, Law et al., 1984). If everything goes well a result should be available at about 19–20 weeks gestation. Such a time-scale serves to demonstrate the special advantage of chorion villus sampling (CVS) because using such tissue fetal DNA (and chromosomes) can be obtained and analysed within the first trimester.
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- 1987
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570. Analysis of cell-free fetal DNA from maternal plasma and serum using a conventional multiplex PCR: Factors influencing success
- Author
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N Lale Satiroglu Tufan, Tufan, A. Ç, Kaleli, B., Yildirim, B., Semerci, C. N., and Baǧci, H.
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Optimization ,Serum ,Cells ,polymerase chain reaction ,Fetal gender determination ,fetal DNA ,sex determination ,Neonatal monitoring ,cytogenetics ,male ,Prenatal genetic diagnosis ,Diagnosis ,human ,prenatal diagnosis ,amnion fluid ,human cell ,article ,DNA ,Maternal plasma ,Enzymes ,unclassified drug ,karyotype ,fetus ,Maternal plasmas ,female ,noninvasive prenatal diagnosis ,Genetic engineering ,amniocentesis ,Conventional multiplex PCR ,Maternal serum ,blood sampling ,Genetic disorders ,multiplex polymerase chain reaction - Abstract
Recent technology enables the use of cell-free fetal DNA in maternal plasma and serum for noninvasive prenatal genetic diagnosis. This study was designed to evaluate factors most likely to influence the success of a simple, cost efficient, reliable and replicable conventional PCR technique in the clinical routine of prenatal genetic diagnosis of selected cases. The results strongly suggest that DNA extraction and PCR cycle optimization are 2 major success-limiting steps and the maternal plasma is a better choice over serum for DNA extraction for such prenatal genetic diagnosis. In addition, the use of a ready-to-use PCR mixture containing heat-activated Taq polymerase significantly reduced the risk of nonspecific amplification and of primer dimerization formed at low temperatures during PCR setup and tha initial PCR cycle eliminating false positive results and insufficient PCR amplification, respectively. Thus the ease, rapidity and effectiveness shown by the presented system requiring only optimization of routine PCR procedure and no additional sophisticated equipment could theoretically reduce the cost and number of invasive procedures required for prenatal diagnosis of X-linked recessive genetic disorders and of fetal RhD status.
571. [Untitled]
- Subjects
Statistics and Probability ,Monosomy X ,Pregnancy ,Fetal dna ,Computer science ,Non invasive ,Aneuploidy ,Prenatal diagnosis ,medicine.disease ,Bioinformatics ,computer.software_genre ,Biochemistry ,Fetal aneuploidy ,Computer Science Applications ,Set (abstract data type) ,Computational Mathematics ,Computational Theory and Mathematics ,Fetal sex ,medicine ,Data mining ,Trisomy ,Molecular Biology ,computer - Abstract
Non-invasive prenatal testing (NIPT) of fetal aneuploidy using cell-free fetal DNA is becoming part of routine clinical practice. RAPIDR (Reliable Accurate Prenatal non-Invasive Diagnosis R package) is an easy-to-use open-source R package that implements several published NIPT analysis methods. The input to RAPIDR is a set of sequence alignment files in the BAM format, and the outputs are calls for aneuploidy, including trisomies 13, 18, 21 and monosomy X as well as fetal sex. RAPIDR has been extensively tested with a large sample set as part of the RAPID project in the UK. The package contains quality control steps to make it robust for use in the clinical setting. Availability and implementation: RAPIDR is implemented in R and can be freely downloaded via CRAN from here: http://cran.r-project.org/web/packages/RAPIDR/index.html . Contact: kitty.lo@ucl.ac.uk Supplementary information: Supplementary data are available at Bioinformatics online.
572. Noninvasive Prenatal Diagnosis of Monogenic Diseases by Digital Size Selection and Relative Mutation Dosage on DNA in Maternal Plasma
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Lun, Fiona M. F., Tsui, Nancy B. Y., Chan, K. C. Allen, Leung, Tak Y., Lau, Tze K., Charoenkwan, Pimlak, Chow, Katherine C. K., Lo, Wyatt Y. W., Wanapirak, Chanane, Sanguansermsri, Torpong, Cantor, Charles R., Chiu, Rossa W. K., and Lo, Y. M. Dennis
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- 2008
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573. Noninvasive Diagnosis of Fetal Aneuploidy by Shotgun Sequencing DNA from Maternal Blood
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Fan, H. Christina, Blumenfeld, Yair J., Chitkara, Usha, Hudgins, Louanne, and Quake, Stephen R.
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- 2008
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