384 results on '"Esmaeili, Hamid Reza"'
Search Results
352. First record of the Kalabans, Bangana dero (Hamilton, 1822), from Iran (Teleostei: Cyprinidae).
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Esmaeili, Hamid Reza, Malekzehi, Hashem, Pazira, Abdolrahim, and Freyhof, Jörg
- Abstract
The article offers information on the first record of the Kalabans, Bangana dero, reported found from the Rotak River, Mashkind Basin, and Saravan in eastern Iran. During the same study, other species were found in sympatry including the Cabdio morar, Gonorhynchus diplocheilus and the Carassius auratus. The authors describe the collected species from its standard length of 141.4 mm, the presence of black spots on the flank behind the operculum, to the prominent snout overhanging the mouth.
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- 2013
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353. Noteworthy range extension of two white-toothed shrews in Iran: Crocidura suaveolens and Suncus etruscus (Soricidae).
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Esmaeili, Hamid Reza, Gholamhosseini, Ghorbanali, Zareian, Halimeh, and Krystufek, Boris
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The article offers information on the two white-toothed shrew in Iran. It states that there are eleven shrew species that were known and exist in the country, but there are accordingly other species that have been poorly resolved found within the boundary. It mentions that the researchers obtained a single specimen of the lesser white-toothed shrew from Mehkoyeh from the northwest of the Firuz Abad, Fars Province. In addition, the pygmy white-toothed shrew was also obtained from Mt. Gorm and is considered the small size of the only specimen available.
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- 2008
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354. Comparative microscopic examination of scales in 21 clupeid species from the Caspian Sea and the Indo-Pacific regions.
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Purrafee Dizaj, Leyli, Esmaeili, Hamid Reza, Teimori, Azad, and Abbasi, Keyvan
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• The morphological analysis based on scale characteristics was largely consistent with the phylogenetic relationships of the studied clupeids. • This study highlights that scale characters such as scale shape and size could be used as suitable features for the identification clupeids. • Despite the general similarity of the scales, they may properly be used to estimate the phylogenetic relationships among clupeids. The clupeid fishes are large filter-feeding organisms and have diverse groups of trophic guilds and habitats. They are known for their special body scale, which is unique among the other teleost fishes. Here, we examined microscopic characteristics of scales in 21 clupeid species from four marine resources, including the Caspian Sea, the Persian Gulf and the Gulf of Oman (Indian Ocean) and South China Sea (Haian Islands and Shanwei, Pacific Ocean) to evaluate if the scale features could properly contribute to understanding the taxonomic relationships in these fishes. Typically, the studied scales were morphologically categorized into two types; circular (i.e., true circular, cordate, discoidal) and pentagonal. Also, it was found that the number and the orientation of radii and continuous striae, the presence of pores at the posterior field, overall shape, striations on the posterior field, and scale sizes could be used as suitable features to classify the clupeids in species and genus levels. The result of morphological analysis based on the scale characteristics was largely consistent with the phylogenetic relationships of the studied species. This highlighted that morphological characteristics of the clupeid scale could adequately contribute to the understanding of taxonomic relationships in this large group. [ABSTRACT FROM AUTHOR]
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- 2020
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355. Scale structure of a cobitid fish, Cobitis linea (Heckel, 1849) using different modes of SEM.
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Johal, M. S., Esmaeili, Hamid Reza, and Sharma, M. L.
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STRUCTURAL equation modeling , *COBITIS , *SCALES (Fishes) , *SECONDARY electron emission , *BACKSCATTERING , *CARP , *FISH growth - Abstract
The article details a study on the scale structure of cobitid fish Cobitis linea (C. linea) using different modes of structural equation modeling. Some of modes of SEM used in the study of C. linea include secondary electron image (SEI), back scattered electron image (BEI) and mixed signals of both SEI and BEI and reverse polarity. The study found that the scale of C. linea is similar to the cycloid scales of carps. The scale structure can be used to know the age-growth data of the fish.
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- 2006
356. Exephanes tauricus Hinz, 2000 (Hym.: Ichneumonidae): a new record to Iranian cave fauna.
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DARVISHNIA, Hamid, ESMAEILI, Hamid Reza, SADEGHI, Saber, RIEDEL, Matthias, and MOHAMMADI-KHORAMABADI, Abbas
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ICHNEUMONIDAE ,CAVE animals ,LIFE cycles (Biology) - Abstract
Hymenoptera (Arthropoda: Insecta) may occur in caves to pass overwintering phase of their life cycle. Here, Exephanes tauricus Hinz, 2000 (Ichneumonidae) which is a new record to Iranian fauna, is presented as the first record of this family with overwintering in a cave (Barezard cave, Ilam province, west of Iran). Its distribution and illustration are provided. [ABSTRACT FROM AUTHOR]
- Published
- 2018
357. Contribution to the diversity and distribution of Aphaniops (Teleostei: Aphaniidae) in Oman freshwater ecoregions: units for taxonomy and conservation.
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Zarei, Fatah, Masoumi, Amir Hassan, Al Jufaili, Saud M., and Esmaeili, Hamid Reza
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HABITATS , *ECOLOGICAL regions , *FRESHWATER biodiversity , *OSTEICHTHYES , *FRESH water , *FRESHWATER habitats , *NATIVE element minerals - Abstract
Having parts of three freshwater ecoregions, i.e., Oman Mountains, Southwestern Arabian Coast, and Arabian Interior, Oman is considered to have the greatest freshwater biodiversity among the Arabian Peninsula countries. Freshwater habitats and biodiversity of Oman are unique and greatly valued for the crucial role they play in people's survival, as well as that of its native/endemic biota. An obvious starting point and fundamental step to conserve biodiversity and implementing planning management strategies is correct identification and delineating of the taxonomic and conservation units, and their distribution ranges especially endemic and native faunal elements including small, colorful, and mosquito-eating fish species of the genus Aphaniops. Five species of Aphaniops are present in the northern marginal basins of the Indian Ocean, however, there is still a lack of distributional and taxonomic data in many parts, and the species have not been studied yet for their phylogeographic and population structures, which are essential in designing habitat management and conservation plans. This study analyses mitochondrial COI data of Aphaniops samples collected from numerous widespread localities in Oman, a rarely studied area for this group, using a phylogenetic and phylogeographic framework. Our results confirm the presence of two species in Oman, A. kruppi and A. stoliczkanus, revise and suggest wider distributional ranges for both species, and suggest that A. kruppi is represented by two northern and one southern management units, while A. stoliczkanus is divided into two evolutionary units worthy of additional taxonomic evaluation. [ABSTRACT FROM AUTHOR]
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- 2023
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358. Species on the move: Impacts of climate change on the spatial range of endemic fishes of the eco-sensitive semi-arid area of the Arabian Peninsula.
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Masoumi AH, Esmaeili HR, Khosravi R, Gholamhosseini A, Korkmaz M, and Jeppesen E
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- Animals, Ecosystem, Middle East, Biodiversity, Animal Distribution, Climate Change, Fishes
- Abstract
Climate change is one of the most significant challenges worldwide in the Anthropocene, and it is predicted to importantly affect biological diversity, especially in freshwaters. Freshwater fishes are facing considerable global threats, particularly in eco-sensitive semi-arid to arid areas such as the Arabian Peninsula, which is considered a highly stressed region in the Middle East. Endemic species are believed to display a narrow range of traits, with rarity reflecting adaptation to specific environmental regimes, and they are thus highly sensitive to environmental disturbances. This study is the first attempt to map the occurrence of endemic freshwater fish species and predict the impact of climate change on their spatial range in the semi-arid area of the Arabian Peninsula using Species Distribution Modeling (SDM). We compared the present and future (2041-2060 and 2061-2080) climate niche for the species under various climatic scenarios. All global circulation models (GCMs) performed well in predicting the species' climatic niche (AUC ranging between 0.72 and 0.92). For certain species (Cyprinion acinaces, Garra buettikeri, Carasobarbus exulatus, Arabibarbus arabicus, and Cyprinion mhalense), variables associated with precipitation were more important than those related to temperature, while for others (Carasobarbus apoensis, G. sahilia, G tibanica, and Aphaniops kruppi), temperature-related variables were most important. Precipitation in the coldest quarter and in the driest quarter was the most sensitive variable for the predictions. The species showed distinct responses to climate change; seven were predicted to lose their climatically suitable habitats (losers) and are thus threatened and highly vulnerable to the effects of climate change, while two species were predicted to expand their range (winners). Regular monitoring of fish in the Arabian Peninsula is recommended to conserve endemic species and their ecosystems., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Hamid Reza Esmaeili reports a relationship with Shiraz University that includes: employment. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier B.V.)
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- 2024
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359. Trophic transfer, bioaccumulation and translocation of microplastics in an international listed wetland on the Montreux record.
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Saemi-Komsari M, Esmaeili HR, Keshavarzi B, Busquets R, Abbasi K, Birami FA, and Masoumi A
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- Animals, Bioaccumulation, Environmental Monitoring, Bivalvia metabolism, Fishes metabolism, Gills metabolism, Gills chemistry, Wetlands, Water Pollutants, Chemical analysis, Water Pollutants, Chemical metabolism, Microplastics analysis, Food Chain
- Abstract
Microplastics (MPs) are concerning emerging pollutants. Here, MPs in four edible aquatic species of different trophic levels (between ∼2 and 4), including fish species Esox lucius (Esocidae: Esocinae); Cyprinus carpio (Cyprinidae: Cyprininae); and Luciobarbus caspius (Cyprinidae: Barbinae); and the swan mussel Anodonta cygnea (Unionidae), were assessed in the Anzali freshwater ecosystem. It is a listed wetland in the Montreux record. MPs were extracted from gastrointestinal tracts (GI), gills, muscles, and skin. All the studied fish and mussels (n = 33) had MPs. MP fibres, fragments and sheets were detected in every GI examined, however, fibres were the only type of MPs in skins, muscles and gills and were the most abundant MP. The MPs found in the fish and mussels were mainly made of nylon (35% of the total MPs), polypropylene-low density polyethylene (30%), and polycarbonate (25%). The average numbers of MPs found in every fish specimen, expressed per wet body mass, had a moderate negative correlation with the condition factor (K) (MP/g - K: Pearson correlation r = -0.413, p = 0.049), and there was no significant relation with the growth factor (b) (r = -0.376; p = 0.068). Importantly, Luciobarbus caspius (with trophic level 2.7-2.8) bioaccumulated MPs and presented a strong correlation between their MP contamination and age (r = 0.916 p < 0.05). Greater gill mass (or related factors) played an important role in the accumulation of MPs, and there was a strong correlation between these factors for Esox lucius and Cyprinus carpio (r = 0.876; r = 0.846; p < 0.05 respectively). The highest MP/g gills (1.91 ± 2.65) were in the filter feeder Anodonta cygnea inhabiting the benthic zone. Esox lucius (piscivorous, trophic level 4.1) was the most contaminated species overall (a total of 83 MPs in 8 individuals, with 0.92 MP/g fish), and their gills where MPs mainly accumulated. Cyprinus carpio was the most contaminated specimen (MPs in specimens), while the number of MPs per mass unit increased with the trophic level. Their feeding and ecological behavior in the aquatic habitat affected the level of accumulation. This work includes evidence of translocation of MPs within the aquatic organisms., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests:Hamid Reza Esmaeili reports a relationship with Shiraz University that includes: funding grants. Maryam Saemi reports a relationship with Ministry of Science Research and Technology of the Islamic Republic of Iran that includes: funding grants. If there are other authors, they declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier Inc.)
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- 2024
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360. Scale morphology variability in cyprinid fishes and its significance in taxonomy using light and scanning electron microscopy: A case study of the genus Garra Hamilton, 1822 (Teleostei: Cyprinidae).
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Faal SA, Esmaeili HR, Teimori A, Shahhossein G, Gholamhosseini A, and Reichenbacher B
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- Animals, Cyprinidae anatomy & histology, Cyprinidae classification, Microscopy, Electron, Scanning, Phylogeny, Animal Scales anatomy & histology, Animal Scales ultrastructure, Microscopy
- Abstract
To evaluate scale morphological variability (shape, size, topological macro- and microstructures, ornamentation patterns) of cyprinid fishes, nine species of the genus Garra were selected and their scales from five different body regions were studied by using light and scanning electron microscopy. The scales of the examined species were thin with a central or antero-centrally positioned focus, with no cteni in the posterior part. In addition to these typical characteristics, some morphological variation was observed in the overall shape (irregular round, true oval, round-triangular, irregular pentagonal, hexagonal, irregular hexagonal, pentagonal, ovoid), and the focus shape. These variations were mainly dependent on the fish lengths and the flank region. Morphological analysis clustered the examined species into two distinct groups. Group I consisted of G. amirhosseini and G. gymnothorax, while Group II has three subgroups, which include G. persica and G. mondica (subgroup I), G. meymehensis, G. rossica, G. nudiventris, G. hormuzensis (subgroup II), and G. rufa (subgroup III). The grouping of the studied Garra species based on the current scale morphological characters and the molecular data was only consistent for G. rossica and G. nudiventris. In addition, in the phylogenetic tree, G. persica, G. mondica, G. amirhosseini, and G. hormuzensis formed a distinct clade. However, these species did not represent close relationships in the dendrogram obtained from the scale morphology. A possible explanation why the grouping of the studied Garra species based on their scale morphological characters does not match their phylogenetic relationships is that most of the scale morphological traits vary depending on the fish size and the location of the scales on the flank. Therefore, except for some traits, that is, central or antero-centrally positioned focus, having no cteni, a specific sectioned form so called "tetra-sectioned" type, the other examined variables are not useful enough to be used in the taxonomic study of the examined cyprinid fishes. Therefore, scale morphological characters should be used carefully for taxonomic purposes. RESEARCH HIGHLIGHTS: Shape, size, topological macro- and microstructures, and ornamentation patterns of nine species of the genus Garra were studied by using light and scanning electron microscopy. The scales were thin with a central or antero-centrally positioned focus, with no cteni in the posterior part. Morphological variation was observed in the overall shape (irregular round, true oval, round-triangular, irregular pentagonal, hexagonal, irregular hexagonal, pentagonal, and ovoid), and the focus shape. The grouping of Garra species based on the current scale morphological characters and the molecular data was only consistent for G. rossica and G. nudiventris., (© 2024 Wiley Periodicals LLC.)
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- 2024
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361. Scale Characteristics of Six Fish Species of the Genus Cyprinion (Teleostei: Cypriniformes): A Microscopic Analysis.
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Aslan Faal S, Esmaeili HR, and Teimori A
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- Animals, Microscopy, Electron, Scanning methods, Animal Scales anatomy & histology, Animal Scales ultrastructure, Microscopy methods, Cypriniformes anatomy & histology
- Abstract
This study investigated the morphological characteristics of scales in six Cyprinion species, using light and scanning electron microscopy focusing on key features such as scale type, key scales, lateral line scales, radius/radii, rostral margin, focus, circuli, lepidonts, tubercles, and scale indices. The research analyzed the scales using ultramicroscopy and light microscopy imaging, categorizing them based on size classes and body regions. The morphological variations in scale characteristics were examined across different species, regions, and size classes. Notable findings included the tetra-sectioned form of scales, representing a unique characteristic of the Cyprinion genus. Morphological changes in scale features were observed with fish growth, particularly in the overall shape, focus shape, and size. Quantitative analysis revealed variations in average relative scale length and width among different species, regions, and size classes. The study utilized canonical discriminant analysis for multivariate assessment, classifying the species into distinct groups based on morphometric indices. The findings contribute to the understanding of scale morphology in Cyprinion species and exploring morphological variation between the examined species., Competing Interests: Conflict of Interest: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© The Author(s) 2024. Published by Oxford University Press on behalf of the Microscopy Society of America. All rights reserved. For commercial re-use, please contact reprints@oup.com for reprints and translation rights for reprints. All other permissions can be obtained through our RightsLink service via the Permissions link on the article page on our site—for further information please contact journals.permissions@oup.com.)
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- 2024
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362. Predicting climate change impacts on the distribution of endemic fish Cyprinion muscatense in the Arabian Peninsula.
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Gholamhosseini A, Yousefi M, and Esmaeili HR
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Freshwater fishes are facing considerable threats in the Arabian Peninsula which is considered as a highly stressed region in the Middle East. It is predicted that northern Oman is likely to face decreasing rainfall and increasing temperature in coming decades. In this study, we focused on an endemic cyprinid fish Cyprinion muscatense , as a model to investigate impacts of climate change on the mountain fishes inhibiting in this arid region. This species is expected to be strongly affected by climate change because of its limited distribution range in a montane area surrounded by lowlands and sea, limiting the species in shift to other areas. We used an ensemble approach by considering two regressions-based species distribution modeling (SDM) algorithms: generalized linear models (GLM), and generalized additive models (GAM) to model the species habitat suitability and predict the impacts of climate change on the species habitat suitability. Based on the distribution models, the montane area located in northeastern Oman was identified as the most suitable habitat for this species. Our results indicate that, even under the minimum greenhouse gas emissions scenario (RCP 2.6), climate change will produce a high reduction in its potential future habitats. According to the results of percent contribution, elevation and annual minimum temperature were the most important variables in predicting the species suitable habitats. Results also showed that only a small percentage of suitable habitats for the species within boundaries of protected areas. Therefore, the impact of climate change on the species appears particularly alarming. Although our study was restricted to a single cyprinid freshwater species, decreases in potential habitats are likely predicted for other cyprinid fish species restricted to the mountains of this region, suggesting severe consideration is needed for aquatic systems in future conservation planning, especially for endemic freshwater fishes., Competing Interests: The authors declare no competing interests., (© 2024 The Author(s). Ecology and Evolution published by John Wiley & Sons Ltd.)
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- 2024
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363. Osteological features of some clupeid fishes (Teleostei: Clupeiformes) of Iran.
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Jawad LA, Dizaj LP, and Esmaeili HR
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- Iran, Animals, Animal Fins anatomy & histology, Fishes anatomy & histology
- Abstract
This paper presents the conclusions of a comparative analysis of six osteological features: the Structure of the vertebral column, the morphology of the predorsal bones, the vertebral column regionalization, the pterygiophore interdigitation with neural spines of dorsal fin, the pterygiophores interdigitation of with the haemal spines of the anal fin, and the intermuscular bones (IMB) and hypomerals (HM) of 12 clupeid species of the families Alosidae, Dorosomatidae, Dussumieridae and Ehiravidae. Conceivable taxonomically beneficial osteological features are nominated and utilized to discrete the clupeid species explored. Formulae for the structure of the vertebral column, the dorsal- and anal-fin pterygiophores' interdigitation with the neural and haemal spines of the vertebrae are established. These morphological descriptive traits disclose a morphotype that may be related to the mode of swimming of the species searched. The morphological study of the vertebral column of the species in question permits the division of this bony structure into six morphologically different regions. This regionalization is more intricate than the classical division in abdominal and caudal parts only., (© 2024 Wiley‐VCH GmbH. Published by John Wiley & Sons Ltd.)
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- 2024
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364. Redescription of Cyprinion muscatense (Teleostei: Cyprinidae) with the first phylogenetic analysis of the genus.
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Esmaeili HR, Masoumi AH, Sayyadzadeh G, Zarei F, and Maclaine J
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- Animals, Oman, DNA, Mitochondrial genetics, Phylogeny, Cyprinidae genetics, Cyprinidae classification, Cyprinidae anatomy & histology
- Abstract
Members of the genus Cyprinion (Cypriniformes: Cyprinidae) are found in the Indus River basin west to the Arabian Peninsula and the Tigris-Euphrates River drainages (Persian Gulf basin). The taxonomic status of Cyprinion including Cyprinion muscatense is poorly understood when compared to other cyprinid genera. C. muscatense has been considered as a member of the Cyprinion watsoni-microphthalmum group and a valid species endemic to the Arabian Peninsula. Here, we redescribe C. muscatense based on an integrative morphological and molecular approach and freshly sampled material from several localities in the Oman Mountains ecoregion. The results showed that C. muscatense is distinguished from the other Cyprinion species in the Arabian Peninsula by having a short, thin, and slightly serrated last unbranched dorsal fin ray; the lower number of circumpeduncular scales; lateral line scales; and also scales between the lateral line and the dorsal-fin origin. Subterminal mouth, presence of one pair of small barbels at the mouth corner, 3-4 unbranched and 9½-10½ dorsal-fin branched rays, 12-14 pectoral-fin rays, 7-8 pelvic-fin rays, 2-3 unbranched and 6½-7½ branched anal-fin rays, and 37-40 lateral line scales are other morphological characteristics of C. muscatense. C. muscatense is also well distinguished by molecular characters among its congeners. The first molecular phylogenetic analysis of the genus, covering all currently recognized Cyprinion species except for C. watsoni, is also presented. C. muscatense is resolved as the sister species to another endemic fish of the Arabian Peninsula Cyprinion mhalense, with a Kimura-2-Parameter model distance of 5.3%., (© 2024 Fisheries Society of the British Isles.)
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- 2024
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365. Freshwater lamprey and fishes of Iran: Reappraisal and updated checklist with a note on Eagderi et al. (2022).
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Sayyadzadeh G and Esmaeili HR
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- Humans, Animals, Iran, Fishes, Fresh Water, Lampreys, Catfishes
- Abstract
This checklist aims to update the list of the inland fish fauna of Iran including newly described species and also clarify the status of some taxa including some gobies and catfishes which were ignored in the checklist provided by Eagderi et al. (2022). The checklist is arranged by classes, orders, families, and species. In total, 300 species, belonging to 110 genera, 38 families, 23 orders, and three classes were recognized from Iranian basins, with the presence of 11 reported species that need confirmation by specimens. Additional notes about the taxonomy of several taxa are provided in the discussion section.
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- 2024
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366. Freshwater fishes of Iraq: a revised and updated annotated checklist2023.
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Iek E, Jawad L, Eagderi S, Esmaeili HR, Mouludi-Saleh A, Sungur S, and Fricke R
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- Humans, Animals, Iraq, Fishes, Fresh Water, Cyprinidae, Cypriniformes, Perciformes, Catfishes
- Abstract
The current status of the freshwater fishes of Iraq is revised, and an updated checklist is presented. The confirmed freshwater fishes of Iraq comprise 98 species belonging to 16 orders, 28 families, and 56 genera. Among these, 21 species (21.4%) are alien, and three species (3.0%) are considered endemic to Iraq. The orders with the largest numbers of species in the ichthyofauna of Iraq are Cypriniformes (57 species), followed by Siluriformes (12 species), Mugiliformes and Cyprinodontiformes (six species in each), Acanthuriformes and Cichliformes (three species in each), Centrarchiformes and Gobiiformes (two species in each), and the others represent only one species. At the family level, the Cyprinidae have the greatest number of species (28; 28.3% of the total species), followed by Nemacheilidae (16 species), Leuciscidae (eight species), Mugilidae (six species), Sisoridae (five species), and Xenocyprididae (four species in each). A total of 20 species that have been previously reported from Iraq have been excluded from the checklist. According to IUCN Red List criteria, among 77 naturally distributed species (alien species not included), 10 species (13.0%) are categorized as threatened extinctions, with three (3.9%) as CR, one (1.3%) as EN, and six (7.8%) as VU. A total of 38 taxa were assessed (49.4%) as LC, 27 species were not assigned NE (35.1%), and two species (2.0%) were classified as DD, i.e., with insufficient knowledge.
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- 2023
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367. Freshwater fishes of Syria: a revised and updated annotated checklist-2023.
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Saad A, Iek E, Esmaeili HR, Fricke R, Sungur S, and Eagderi S
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- Humans, Animals, Syria, Fishes, Fresh Water, Cyprinidae, Cypriniformes, Catfishes, Cichlids
- Abstract
The current status of the freshwater fishes of Syria is revised, and an updated checklist is presented. The confirmed freshwater fishes of Syria comprise 108 species belonging to 15 orders, 25 families, and 51 genera. Among these, 11 species (10.2%) are alien, and six species (5.6%) are considered endemic to Syria. The orders with the largest numbers of species in the ichthyofauna of Syria are Cypriniformes (68 species), followed by Siluriformes and (nine species), Cichliformes (eight species), Mugiliformes (seven species), Cyprinodontiformes (six species), and others represent one species in each. At the family level, Cyprinidae has the greatest number of species (30 species; 27.8% of the total species), followed by Leuciscidae (21 species), Nemacheilidae (11 species), Cichlidae (eight species), and Mugilidae (seven species). According to IUCN Red List criteria, among 97 naturally distributed species (alien species not included), Tristramella sacra extinct (EX) and 24 species (26.5%) are categorized as threatened extinctions, CR, EN, and VU (eight species in each). A total of 17 species previously reported from Syria have been excluded from the checklist, either in the present study or in previous studies.
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- 2023
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368. Morphological and molecular characterization of the Makran Glossogobius cf. giuris (Teleostei: Gobiidae) and the Glossogobius giuris species complex taxonomy.
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Zarei F, Kovai M, Esmaeili HR, and Ghanbarifardi M
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- Animals, Ecosystem, Phylogeny, Fishes genetics, Fishes anatomy & histology, Perciformes genetics
- Abstract
The Indo-West Pacific Glossogobius giuris(Hamilton, 1822) species complex has four spatially circumscribed independent lineages, partially taxonomically resolved. A sample of gobies from the G. giurisspecies complex was recently collected from the Makran River System, south-eastern Iran, which drains into the northern Oman Sea. The taxonomic status of thispopulation was clarified using a molecular and morphological framework. Molecular and morphological data both revealed that the examined sample from the Makran River System is conspecific with G. giurisB which is widely distributed in the coastal habitats and basins of the Indian Ocean. In addition, consensus from different molecular species delimitations, K2P genetic distance, and tree topologies confirmed the four lineages of the G. giuris species complex as distinct taxonomic entities, hereby highlighting the necessity of an integrative morphological and molecular approach to complete the clarification of taxonomic diversity within this group. Glossogobius giuris species complex taxonomy is discussed and solution recommended.
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- 2023
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369. Inland fishes of the Arabian Peninsula: Review and a revised checklist.
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Esmaeili HR and Hamidan N
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- Humans, Animals, Arabia, Fishes
- Abstract
The Arabian Peninsula comprises the seven countries of Bahrain, Kuwait, Oman, Qatar, Saudi Arabia, the United Arab Emirates, and Yemen (including the Socotra archipelago), covering an area of more than 3 million km). Although arid habitats cover most parts of the Arabian Peninsula, the region has several freshwater systems and comprises all or parts of four freshwater ecoregions basins that support a variety of inland aquatics including fishes. The current checklist provides all fish species in inland waters of the Arabian Peninsula including all recognized and named taxa, documenting recent changes and controversies in nomenclature, records, taxonomic status, occurrence, synonyms, common English name, range distribution, and conservation status based on several field surveys throughout the area and available articles. The confirmed inland ichthyodiversity of the Arabian Peninsula comprise 48 species belonging to 25 genera, 14 families, nine orders, and a class. Among these, 10 species (20.8%) are alien, and 21 species (52.3%) are considered endemic to the Arabian Peninsula. Favonigobius reichei is a new record for inland waters of the Arabian Peninsula. The most diverse order is Cypriniformes (19 species, 39.6%), followed by Cyprinodontiformes and Gobiiformes (eight species, 16.7% in each), Cichliformes (four species, 8.33%), Mugiliformes (three species, 6.25%), Anguilliformes and Siluriformes (two species, 4.17% in each), and Centrarchiformes and Gonorynchiformes (one species, 4.2% each). Saudi Arabia and Oman with 23 species (47.9% each) rank first in fish diversity (both native and exotic), followed by Yemen (15 species, 31.25%), UAE (seven species, 14.58%), Bahrain (two species, 4.17%), and Qatar and Kuwait (one species, 2.1% each). Of 21 endemic species of the Arabian Peninsula, six, six, and four species are restricted to the territories of Oman, Saudi Arabia and Yemen, respectively. No endemic fish have been reported from Bahrain, Kuwait, Qatar, and the United Arab Emirates. The list also includes two subterranean species belonging to the genus Garra. The provided data will be necessary to take action for effective conservation management strategies and policies.
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- 2023
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370. Otoliths of Caspian gobies (Teleostei: Gobiidae): Morphological diversity and phylogenetic implications.
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Zarei F, Esmaeili HR, Stepien CA, Kovačić M, and Abbasi K
- Subjects
- Animals, Phylogeny, Fishes, Biological Evolution, Otolithic Membrane anatomy & histology, Perciformes
- Abstract
Otoliths (ear stones) of the inner ears of teleost fishes, which develop independently from the skeleton and are functionally associated with hearing and the sense of equilibrium, have significantly contributed to contemporary understanding of teleost fish systematics and evolutionary diversity. The sagittal otolith is of particular interest, since it often possesses distinctive morphological features that differ significantly among species, and have been shown to be species- and genus-specific, making it an informative taxonomic tool for ichthyologists. The otolith morphology of the Caspian Sea gobiids has not been thoroughly studied yet, with data available for only a few species. The aim of the present paper is to examine the qualitative and quantitative taxonomic and phylogenetic information in the sagittal otoliths of these species. A total of 118 otoliths representing 30 gobiid species (including 53.5% of the Caspian gobiofauna) in three gobiid lineages (i.e., Gobius, Pomatoschistus, and Acanthogobius) and 11 genera (i.e., all Ponto-Caspian gobiid genera except Babka) were analysed at taxonomic levels using an integrated descriptive and morphometric approach. The results indicated high taxonomic efficiency of otolith morphology and morphometry at taxonomic levels for the Ponto-Caspian gobiids. Our qualitative and quantitative otolith data also (i) support the monophyly of neogobiin gobies, (ii) along with other morphological and ecological data, offer a new perspective on the systematics of Neogobius bathybius, (iii) suggest the reassignment of Hyrcanogobius bergi to the genus Knipowitschia, and (iv) question the phylogenetic integrity of the four phenotypic groups previously defined in the tadpole-goby genus Benthophilus; however, more studies are needed to complete these evaluations and confirm our otolith study findings., Competing Interests: The authors have declared that no competing interests exist., (Copyright: This is an open access article, free of all copyright, and may be freely reproduced, distributed, transmitted, modified, built upon, or otherwise used by anyone for any lawful purpose. The work is made available under the Creative Commons CC0 public domain dedication.)
- Published
- 2023
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371. Species diversity deflation: Insight into taxonomic validity of Garra species (Teleostei: Cyprinidae) from Dhofar Region in the Arabian Peninsula using an integrated morpho-molecular approach.
- Author
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Sayyadzadeh G, Jufaili SMA, and Esmaeili HR
- Subjects
- Animals, Phylogeny, Arabia, Rivers, Cyprinidae genetics
- Abstract
Garra is the most species-rich genus of freshwater fishes in the Arabian Peninsula, including Oman, which has eight recognized, species restricted mainly to the Hajar and Dhofar mountains. Garra species from the Dhofar region in Oman are reviewed based on integrated morphological and molecular (COI) data of newly collected fishes from the type localities of G. sindhae and G. smartae, and a new population from Wadi Laggashalyon. No diagnostic character was found to distinguish the two species and the Laggashalyon population as distinct taxa. Garra dunsirei, another species endemic to a sinkhole at Tawi Attair, a very difficult area to access at a depth of about 211 m, was examined here based on the GenBank data and the diagnostic characters given in the original descriptions of the studied Garra species. In addition, the phylogenetic tree placed the sequenced Omani Garra fishes into nine groups with K2P sequence divergence of 0.8% (G. smartae and G. smartae_Laggasaylon); 1.2% (G. smartae and G. sindhae), and 14.5% (G. Shamal and G. dunsirei) in their COI barcode region. A molecular species delimitation approach using PTP, also detected one entity for Garra species from the Dhofar region (G. dunsirei, G. sindhae and the both populations of G. smartae), which is consistent with our morphological data. Therefore, based on absence of diagnostic characters, low genetic distance, and molecular species delimitation approach, we treat G. sindhae and G. smartae as junior synonyms of G. dunsirei.
- Published
- 2023
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372. Scales surface topography: Comparative ultrastructural and decorative characteristics of a modern elasmoid fish scales in a cyprinid fish, Garra shamal (Teleostei: Cyprinidae) using digital optical light and scanning electron microscope imaging.
- Author
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Al Jufaili SM, Echreshavi S, and Esmaeili HR
- Subjects
- Animals, Microscopy, Electron, Scanning, Rivers, Biological Evolution, Cyprinidae anatomy & histology
- Abstract
The complex architecture of fish scale has been investigated for several decades to show an existing link between scale morphology/microstructure and systematic/evolutionary relationships of fishes. In the present study, the surface architecture structure associated with the scales of a hill stream cyprinid fish Garra shamal restricted to the Hajar Mountains of the Arabian Peninsula was examined by optical light and scanning electron microscopy; (i) to describe the whole morphology, architectural design and hidden microstructures of scales in an endemic fish of the Arabian Peninsula, G. shamal, (ii) to investigate the phenotypic plasticity of scales in six selected regions of the fish body, (iii) to show an ontogenetic pattern of scale morphology in different size classes, and (iv) to study morphometric parameters for scales, and determine the most valuable indices for differentiating the scales of different body regions and the different size groups of studied species. For this purpose, scales were removed from six body regions of three size classes. The scale of G. shamal, as an ossified platelet and hard structure covering the outer part of fish in different body parts and size groups, demonstrated numerous hidden morphological and structural characteristics, and sculptural design, for example, type, shape, and size in general term, and circuli (thickness, arrangement, and relative spacing of circuli around the focus), radii (number, shape, its origin from focus), lepidonts (the texture, shape, size, orientation, and type of its attachment), and granules (shape, size, number, and configurations) in a specific term, that can contribute efficiently in fish identification and classification at the genus and species levels. Position of focus, presence of radii in all four fields of scales (anterior, posterior, and laterals) and thus tetra-sectioned type, presence of specific tubercle arrangement on the posterior region, and some scale indices can be used as a taxonomic tool in Garra identification. Moreover, scales in G. shamal demonstrated plasticity in different fish size classes, and the origin of scales on the fish body, revealing a kind of ontogenetic variation, and the importance of key scales (scales below the dorsal fin) in the lepidological studies. The quantitative and qualitative traits described here based on the optical light microscopy and electron scanning microscopy can be implemented along with other morphological and molecular characteristics to have a better taxonomic resolution of the genus Garra. RESEARCH HIGHLIGHTS: The optical light microscopy (LM) and scanning electron microscopy (SEM) techniques enhanced our knowledge of scale morphology in a cyprinid fish restricted to the Arabian Peninsula. The scale of G. shamal, in different body parts and size groups, demonstrated numerous hidden morphological and structural characteristics, and sculptural design that can contribute efficiently in fish identification and classification at the genus and species levels. Tetra-sectioned cycloid type, position of focus, presence of specific tubercle arrangement on the posterior region, and some scale indices can be used as a taxonomic tool for identification of the genus Garra. The scales showed plasticity in different fish size classes, and the origin of scales on the fish body, revealing a kind of ontogenetic variation., (© 2022 Wiley Periodicals LLC.)
- Published
- 2023
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373. Gobies (Teleostei: Gobiidae) of the oldest and deepest Caspian Sea sub-basin: an evidence-based annotated checklist and a key for species identification.
- Author
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Zarei F, Esmaeili HR, Abbasi K, Kovačić M, Schliewen UK, and Stepien CA
- Subjects
- Animals, Caspian Sea, Water, Fishes, Perciformes
- Abstract
An evidence-based annotated checklist of gobiid species (Teleostei: Gobiidae) inhabiting the South Caspian Sea and its catchment area (i.e., the South Caspian Sea sub-basin) is compiled. The South Caspian Sea sub-basin gobiofauna currently comprises 38 confirmed species in 11 genera (i.e., 88.4% of the Caspian gobiofauna); the most diverse genus is Benthophilus (16 species, 42.1%), followed by Ponticola (seven species, 18.4%), and Neogobius (four species, 10.5%). Ten species (26.3%) are endemic to the South Caspian Sea sub-basin, another 21 species (55.3%) are endemic in the Caspian Sea basin as a whole, six (15.8%) are native to the Ponto-Caspian region, and one species (2.6%) is exotic. According to the current IUCN Red List, 24 species (64.9%) are listed as being of "Least Concern", eight species (21.6%) are "Data Deficient", and five species (13.5%) as "Not Evaluated". Similar numbers of species are confirmed to inhabit the South Caspian Sea sub-basin waters of the three countries that border it: Iran harbors 25 species (nine genera), Azerbaijan has 28 species (10 genera), and Turkmenistan has 26 species (10 genera). The greatest known diversity of Benthophilus in South Caspian waters occurs in Azerbaijan and Turkmenistan (11 species each), whereas Iranian waters harbor seven species. In comparison, Iran, with six out of eight species (75%), has the greatest diversity of Ponticola known from the Caspian Sea basin. Species richness and endemism of the Caspian Sea gobiid-fauna varies considerably with latitude: the North, Middle and South sub-basins respectively harbor 21, 31, and 37 native species, of which 0, 3, and 10 species are endemic in that sub-basin alone. The high species diversity and endemism of Gobiidae in the South Caspian Sea sub-basin may have resulted from: (i) greater ecological diversity compared to the northern Caspian Sea marine areas (e.g., water depths) that may have led to differential niche adaptation and adaptive radiation in the Benthophilus-Anatirostrum species flock, (ii) lower historical extinction rate compared to Caspian higher latitudes, which had greater exposure to the Pleistocene's extreme climatic changes, (iii) geological history of freshwater habitats in the South Caspian Sea sub-basin that set the speciation and evolutionary stage for the genus Ponticola during these Pleistocene climatic oscillations, (iv) presently less limiting conditions compared to the North Caspian Sea, i.e., higher present winter minimum of water temperature and higher salinity, and (v) Iranian freshwater abundance, variability and habitat diversity. Contemporary gobiid diversity and endemism in the Caspian Sea basin suggests two higher-priority conservation areas: (i) freshwater habitats of the South Caspian Sea region in Iran and Azerbaijan, and (ii) shallow coastal and deep waters of the South and Middle Caspian Sea sub-basins. An identification key is provided for the updated gobiid species from the South Caspian Sea sub-basin.
- Published
- 2022
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- View/download PDF
374. An integrative insight into the diversity, distribution, and biogeography of the freshwater endemic clade of the Ponticola syrman group (Teleostei: Gobiidae) in the Caucasus biodiversity hotspot.
- Author
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Zarei F, Esmaeili HR, Sadeghi R, Schliewen UK, Kovačić M, Abbasi K, and Gholamhosseini A
- Abstract
Freshwater habitats of the Caucasus biodiversity hotspot represent a center of endemism for the gobiid genus Ponticola Iljin, 1927. Hitherto, large-scale molecular studies, owing to restricted taxon and geographical sampling, have failed to give an elaborate picture of diversity and evolutionary history of these species. Here, to contribute to filling this gap, we assessed taxonomic diversity, phylogeography and evolutionary history for the south Caspian populations of Ponticola presently classified as P. iranicus and P. patimari , using an integrative taxonomic approach comprising an entire geographic range sampling, and analyses of mitochondrial DNA haplotypes, the head lateral line system, otolith shape, and meristic and morphometric variation. All freshwater samples of the P. syrman group belong to a monophyletic clade with two main subclades: a small subclade confined to the upper Sefidroud sub-basin including the type locality of P. iranicus and a large subclade with three geographically constrained haplogroups (Hg1, Hg2, and Hg3), comprising the rest of the distribution. Hg1 showed an eastern distribution including the type locality of P. patimari , while Hg2 and Hg3 are sister groups with central and western-central distributions, respectively. The freshwater clade diverged from P. syrman during the Tyurkyanian low stand (~150 m b.s.l. lasting ~0.1 Myr), while the divergence of P. iranicus and P. patimari and radiations within P. patimari took place during the Bakunian high stand (up to 50 m a.s.l. lasting ~378-480 kya). Species delimitation analyses indicated two distinct species, corresponding to each main subclade. Although the otolith shape and lateral line analyses did not reflect with phylogeographic pattern, PCA and DFA plots of meristic and morphometric data showed a clear separation of the two major subclades corresponding to P. iranicus and P. patimari , suggesting the presence of significant morphological variation meriting formal taxonomic recognition. Overall, our findings (i) reveal the presence of two freshwater endemic species in the P. syrman group , and pending further investigation, hypothesize the presence of a third cryptic species; (ii) revise and document a narrow distributional range and low diversity for P. iranicus , in contrast to a wider distributional range and high diversity for P. patimari ; (iii) suggest that the climatic oscillations of the Pleistocene were associated with the cladogenesis within the P. syrman group ; and (iv) allowed for the recognition of conservation units and proposition of management measures., Competing Interests: We declare no conflict of interest., (© 2022 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd.)
- Published
- 2022
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375. Oxyurichthys omanensis sp. nov., a new Eyebrow Goby (Teleostei: Gobiidae) from Oman.
- Author
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Zarei F, Jufaili SMA, and Esmaeili HR
- Subjects
- Animals, Ecosystem, Fishes, Oman, Eyebrows, Perciformes
- Abstract
Oxyurichthys omanensis sp. nov. is described as a new gobiid species from a mudflat/estuary habitat in northern Oman. The new species is diagnosed among all currently recognised congeners by the following combination of character states: elongate tentacle on dorsoposterior surface of the eye; nape with well-developed membranous crest; nape scaled to above anterior half of opercle along sides with naked median along membranous crest, scales never reaching to above preopercle; opercle and pectoral base naked; scales ctenoid laterally on trunk posterior to base of second dorsal fin 3rd element; lateral scale rows 5158, usually 5156; transverse forward scale rows 2329, usually 2428; transverse rearward scale rows 1416, usually 1415; upper lip usually constricted at premaxillary symphysis; infraorbital transverse papillae row 2 reaching eye margin dorsally and markedly short of longitudinal row d ventrally; additional short transverse papillae rows between rows 2 and 3i present; dark saddle present over caudal peduncle; snout length 34.945.4% HL; second dorsal-fin longest ray 1.11.6 head depth; pelvic fin always reaching or passing anal-fin origin. The K2P genetic distances (%) in the mtDNA COI barcode region between O. omanensis and the other Oxyurichthys species were all high (11.230.6%) with the K2P nearest neighbor distance of 11.2% to O. cornutus and O. ophthalmonema.
- Published
- 2022
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376. Ponticola hircaniaensis sp. nov., a new and critically endangered gobiid species (Teleostei: Gobiidae) from the southern Caspian Sea basin.
- Author
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Zarei F, Esmaeili HR, Kovai M, Schliewen UK, and Abbasi K
- Subjects
- Animals, Caspian Sea, Fishes, Hybridization, Genetic, Rivers, Perciformes
- Abstract
Ponticola hircaniaensis sp. nov. is described as a new gobiid species from the Kaboudval Stream, southern Caspian Sea basin. The new species is diagnosed among Caspian Sea basin Ponticola species by the following combination of characters: second dorsal-fin branched rays 1416, anal-fin branched rays 1012, scales in lateral series 5259; lower jaw slightly, if at all, prognathous; head and body yellowish brown showing a reticulate brown pattern on a yellow background, first dorsal fin with a marginal bright orangish-yellow band and a dark anterior spot, upper part of pectoral-fin base with a distinct dark brown stripe; length of third spine in first dorsal fin 13.418.3 % of standard length (SL), second dorsal-fin spine length 11.113.8 % SL, caudal peduncle length and depth 16.420.1 % and 11.112.8 % SL, respectively, head depth at nape 70.981.0 % of head length (HL), and at eye 52.566.0 % HL; sagittal otolith dorsal rim with a broad concavity in the middle, dorsal depression absent or indistinct, sulcus length/sulcus height and sulcus height/otolith height ratios 1.471.82 and 0.340.40, respectively. It is also characterised by a K2P nearest neighbour distance of 5% to P. kessleri in the mtDNA COI barcode region. Mitochondrial and nuclear DNA analyses suggested extensive hybridization between P. hircaniaensis sp. nov. and P. gorlap at Kaboudval, providing evidence for the first record of hybridization in the Ponto-Caspian gobiids. Based on narrow geographic range isolated above the Zarrin Gol Dam (< 2 km2), extensive hybridization with P. gorlap, and other threats, the new species should be considered Critically Endangered.
- Published
- 2022
- Full Text
- View/download PDF
377. Ichthyodiversity in southeastern Arabian Peninsula: Annotated checklist, taxonomy, short description and distribution of Inland fishes of Oman.
- Author
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Esmaeili HR, Jufaili SA, Masoumi AH, and Zarei F
- Subjects
- Animals, Arabia, Biodiversity, Humans, Oman, Cyprinodontiformes, Ecosystem
- Abstract
Oman, a country in Southwest Asia, situated on the southeastern quarter of the Arabian Peninsula presents a high level of biological diversity especially marine elements. Although arid habitats cover most parts of Oman (82%), the region has several freshwater systems that are vital for the survival of people as well as for different groups of animals and plants. Research works on Oman biodiversity including terrestrial and marine, have been steadily increasing over the last few decades, but freshwater ecosystems have not been well investigated. Oman comprises parts of three freshwater ecoregions including the Oman Mountains, Southwestern Arabian Coast, and Arabian Interior having xeric freshwaters and endorheic (closed) basins which support a variety of inland fishes. The current checklist provides for each species of inland waters of Oman all recognized and named taxa, documenting recent changes and controversies in nomenclature, its records, taxonomic status, synonyms, etymology, common English name, short description, range expansion, and detailed distribution map based on several field surveys throughout the country. We also provide native, endemic, and introduced species. The diversity of inland fishes of Oman included in this annotated checklist consists of 23 recognized species in 15 genera, 10 families, seven orders, and a class. Also, for the first time, we report and confirm the presence of four species in the inland waters of Oman. The most diverse order is Cypriniformes (nine species, 39.13%), followed by Gobiiformes (six species, 26.09%), Cyprinodontiformes (three species, 13.04%), Cichliformes (two species, 8.69%), and Centrarchiformes, Gonorynchiformes and Mugiliformes (one species, 4.35% each). 21 native species (91.3%) in nine families and two exotic species (8.7%) in two families are listed here. Out of 21 native species, eight species (16.8%) in two families are endemic elements that are restricted to the Oman territory only. Identification of all recognized species was confirmed by DNA barcoding (mitochondrial COI). Oman Mountains Ecoregion (OME), Southwestern Arabian Coast Ecoregion (SACE), and Arabian Interior Ecoregion (AIE) harbor 15, 12, and one species, respectively. The provided data will be necessary for increasing the fish knowledge, the development of competent and pragmatic management plans and effective conservation policies.
- Published
- 2022
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378. Redescription of the goby Glossogobius tenuiformis Fowler, 1934 (Teleostei: Gobiidae) and assignment of Oman Glossogobius populations: a morpho-molecular approach.
- Author
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Jufaili SMA, Esmaeili HR, Sayyadzadeh G, Masoumi AH, and Larson HK
- Subjects
- Animals, Fishes anatomy & histology, Gills, Oman, South Africa, Perciformes
- Abstract
Glossogobius giuris was originally described as Gobius giuris from the Ganges River, India. However, based on the uncertainty of its type locality and its apparent widespread distribution, a comprehensive study is being carried out to define the correct taxonomic status of this taxon. The South African population of the Glossogobius from St. Lucia Lake, KwaZulu-Natal was described as Glossogobius tenuiformis by Fowler in 1934. It has usually been considered as Glossogobius giuris but Hoese and Hammer indicated that it was a distinct species (2021: 83). Here, based on morphological characters and a molecular data set, we redescribe Glossogobius tenuiformis and assign the Oman populations of Glossogobius to this species. Glossogobius tenuiformis is distinguished from G. giuris by the absence or very short (and often only a few papillae long) sensory papilla line 6; presence of single rows of the sensory papillae in each cheek line, 1216 pre-dorsal scale counts, and 1+1+911, usually 1+1+10, gill rakers on outer face of first arch. Glossogobius tenuiformis is also distinguished by molecular characters. Glossogobius tenuiformis shows 16% genetic distance with other members of this species complex, that includes G. laticeps from Vietnam, Bangladesh and China, G. giuris from South Africa and India and giuris C from India, Myanmar, Nepal, Bangladesh and Vietnam, and the highest genetic distance (24%) with G. circumspectus.
- Published
- 2022
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379. Mystus cyrusi, a new species of bagrid catfish (Teleostei: Bagridae) from Middle East.
- Author
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Esmaeili HR, Sayyadzadeh G, Zarei F, Eagderi S, and Mousavi-Sabet H
- Subjects
- Animal Distribution, Animals, Female, Middle East, Rivers, Catfishes genetics
- Abstract
Mystus cyrusi, new species, is described from the Kol River drainage which flows to the Straits of Hormuz in southern Iran. It is distinguished from its closest relative, Mystus pelusius from the Tigris-Euphrates River system by a combination of characters: The maxillary barbel short, not reaching to beyond pelvic fin (vs. extends as far as anal fin in some female M. pelusius), shorter adipose fin (30.837.4% SL) and with a steeper sloping at its origin vs. longer (37.645.6% SL) and with a more gently sloping in M. pelusius), greater head depth (16.6421.9% SL vs. 12.616.59% SL in M. pelusius), greater caudal-peduncle depth (10.312.5% SL vs. 8.710.5% SL in M. pelusius) and fewer total gill rakers (1214, mode 12) vs. (1417 in M. pelusius). Mystus cyrusi is also well distinguished by molecular characters. Genetically, M. cyrusi shows the lowest genetic distance with M. pelusius (4.6%), and then with M. singaringan (11.6%), M. wolffii (13.1%), and M. bleekeri (13.4%) among the 21 studied species in their mtDNA sequences. Mystus cyrusi shows the highest genetic distance with M. montanus (26.5%).
- Published
- 2022
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- View/download PDF
380. Does the Garra population (Teleostei: Cyprinidae: Labeoninae) from the Kol River drainage, Persian Gulf basin merit formal description?
- Author
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Sayyadzadeh G and Esmaeili HR
- Subjects
- Animals, DNA, Mitochondrial genetics, Female, Indian Ocean, Phylogeny, Cyprinidae genetics, Rivers
- Abstract
Recognizing and defining a species has been a controversial concern for a long time. To define the variation and the limitation between different species, especially closely related taxa in a complex species group, several concepts have been proposed which may lead to different taxonomic decisions. When a taxonomist studies a specific taxon, she/he should adopt a species concept and provide a species limitation to define the studied taxa. Garra population from the Kol River drainage, Persian Gulf basin has already been considered as Garra sp., based on molecular data, and to date no taxonomic decision has been made to provide a specific name for it. The Kol population presents several morphological characters that distinguish it from congeners: fully scaled breast; 78 branched dorsal-fin rays; caudal fin with 1617 branched rays and well-developed mental disc with free lateral and posterior margins. It is also distinguished from all other congeners in the Garra rufa group in Iran, by having two fixed, diagnostic nucleotide substitutions in the mtDNA COI barcode region. Furthermore, the Kol population demonstrates some distinct osteological characteristics in comparison to its closest species G. mondica. Based on the integrative molecular phylogenetic and species delimitation analyses, and morphological, osteological and distribution range data presented here, we think that the Kol River population merits formal description and can be considered as a distinct taxonomic unit (species).
- Published
- 2021
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381. Otolith Morphology: A Hidden Tool in the Taxonomic Study of Goatfishes (Teleostei: Perciformes: Mullidae).
- Author
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Echreshavi S, Esmaeili HR, Teimori A, and Safaie M
- Abstract
Goatfishes (Teleostei, Mullidae) are a group of mainly coastal fishes that form an important part of food chains, and also have commercial value. In the marine waters of Iran, they are found in the Persian Gulf and Oman Sea (Gulf of Oman). This study evaluated whether otolith morphology can be used to distinguish of species and genera, and also to interpret whether otoliths of the same species differ among two studied marine systems. To do this objective, the otolith morphology of ten species belonging to three genera were analyzed by SEM photography and shape analysis. Among the morphometric variables, relative rostrum length was found to be the most important otolith variable for discriminating Mulloidichthys (RRL = 32.29 ± 0.59) and Parupeneus (RRL = 37.39 ± 1.10), while rectangularity (RE
x ) was the most important shape index for discriminating Mulloidichthys (REx = 0.99 ± 1.94) from Parupeneus (REx = 0.77 ± 1.21). By considering otolith morphology, Upeneus showed a better separation than the two other genera. The otoliths of Upeneus are diagnosed by short dorsal length (RDL = 69.35 ± 1.51), higher rostrum height (RRH = 53.63 ± 1.99), short rostrum (RRL = 31.12 ± 1.99), and antirostrum lengths (RanL = 12.38 ± 1.51). The most diverged phenotype within the genus Parupeneus was found for the otoliths of P. rubescens , and the most diverged phenotype within the genus Upeneus was found for the otoliths of U. sundaicus . The otoliths of the same species did not demonstrate large variation between the Persian Gulf and the Gulf of Oman. This study provides additional morphological evidence for the separation of goatfishes at the species and genus levels. We also underline that the slight observed differences between the otoliths of two marine systems are mainly caused by the ecological differences known between these two main systems.- Published
- 2021
- Full Text
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382. Embryonic and early development of the Zagros tooth-carp, Aphanius vladykovi (Actinopterygii: Cyprinodontidae).
- Author
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Sanjarani Vahed N, Esmaeili HR, Masoudi M, and Ebrahimi M
- Subjects
- Animals, Embryo, Nonmammalian, Embryonic Development, Morphogenesis, Killifishes embryology, Killifishes growth & development
- Abstract
The embryonic and early larval development of laboratory reared Zagros tooth-carp, Aphanius vladykovi Coad, 1988, are described and illustrated. Development and embryogenesis start with the external fertilization of sticky, transparent and spherical telolecithal/macrolecithal eggs with a mean diameter of 1.61± 0.12 mm and it continues with meroblastic/radial cleavage, blastulation/blastula formation, epibolic cell migration during gastrulation and organogenesis resulting in a newly hatched larvae of 5.23 ± 0.09 mm in length with attached yolk sac at about 164 hr (at 24 ± 1°C) after fertilization., (© 2018 Wiley Periodicals, Inc.)
- Published
- 2018
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- View/download PDF
383. Molecular systematics and distribution review of the endemic cyprinid species, Persian chub, Acanthobrama persidis (Coad, 1981) in Southern Iran (Teleostei: Cyprinidae).
- Author
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Teimori A, Esmaeili HR, Sayyadzadeh G, Zarei N, and Gholamhosseini A
- Abstract
The Iranian Persian chub is an endemic species of the family Cyprinidae known only from few localities in drainages of Southern Iran. It was originally described in the genus Pseudophoxinus as ( Pseudophoxinus persidis ) and then Petroleuciscus (as Petroleuciscus persidis ). In this study, we examined phylogenetic relationships of the Iranian Persian chub with other relatives in the family Cyprinidae based on the mitochondrial cytochrome b gene to estimate the phylogenetic (and taxonomic) position of the species. Our molecular phylogenies show that new fish sequences from the drainages in southern Iran are clustered with sequences of the genus Acanthobrama from GenBank while the sequences from two other genera ( Pseudophoxinus and Petroleuciscus ) are in distinct clade. Therefore, we conclude that the populations of Persian Chub in drainages of southern Iran (i.e., Kol, Kor, Maharlu and Persis) belong to the genus Acanthobrama and species Acanthobrama persidis. The predicted geographic distributions for the species showed a large area of suitable climate for A. persidis across south and west of Iran especially in the Kor River basin. Some other parts in the Persis and Tigris are also might have been suitable habitats for this cyprinid species showing possible dispersal route of Acanthobrama from Tigris to the Persis, Kor and Kol basins.
- Published
- 2015
384. Karyological and molecular analysis of three endemic loaches (Actinopterygii: Cobitoidea) from Kor River basin, Iran.
- Author
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Esmaeili HR, Pirvar Z, Ebrahimi M, and F Geiger M
- Abstract
This study provides new data on chromosomal characteristics and DNA barcoding of three endemic loaches of Iran: spiny southern loach Cobitis linea (Heckel, 1847), Persian stream loach Oxynoemacheilus persa (Heckel, 1848) and Tongiorgi stream loach Oxynoemacheilus tongiorgii (Nalbant & Bianco, 1998). The chromosomes of these fishes were investigated by examining metaphase chromosome spreads obtained from epithelial gill and kidney cells. The diploid chromosome numbers of all three species were 2n=50. The karyotypes of C. linea consisted of 4M + 40SM + 6ST, NF=94; of O. persa by 20M + 22SM + 8ST, NF=90 and of O. tongiorgii by 18M + 24SM + 8ST, NF= 92. Sex chromosomes were cytologically indistinguishable in these loaches. Maximum likelihood-based estimation of the phylogenetic relationships based on the COI barcode region clearly separates the three Iranian loach species of the Kor River basin. All species distinguished by morphological characters were recovered as monophyletic clades by the COI barcodes. The obtained results could be used for population studies, management and conservation programs.
- Published
- 2015
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