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Background This paper provides current data on the biodiversity of boreal lakes of the Vologda Region (north-western Russia), including macrophytes (vascular plants and macroscopic algae) and macrophyte inhabitants (invertebrates and microalgae). The raw data, given in two datasets (Sampling event dataset and an Occurrence dataset) and presented in the form of GBIF-mediated data, were collected from 139 lakes (macrophytes between 2005 and 2021, macrophyte inhabitants between 2014 and 2020). The dataset contains materials on the diversity of vascular plants (Tracheophyta, 3225 occurrences; Bryophyta, 155; Marchantiophyta, 16), macro- and microalgae (Ochrophyta, 546 occurrences; Chlorophyta, 193; Charophyta, 153; Cyanobacteria, 139; Cryptophyta, 86; Myzozoa, 33; Euglenozoa, 27; Rhodophyta, 8; Bigyra, 1) and aquatic invertebrates (Arthropoda, 1408 occurrences; Annelida, 487; Mollusca, 263; Platyhelminthes, 36; Cnidaria, 11). This paper summarises previously unpublished materials in a standardised form. New information The paper summarises the data collected during the long-term phytodiversity studies in a series of lakes of different types (Vologda Region, north-western Russia). Data on algae and invertebrates diversity were obtained in 60 different plant communities of aquatic, semi-aquatic and coastal plants or their combinations. A total of 6787 occurrences were included in the dataset, published in the global biodiversity database (GBIF) for the first time. According to the GBIF taxonomic backbone, the dataset comprised 837 taxa, including 711 lower-rank taxa (species, subspecies, varieties, forms). New records of 47 species rare and protected in the Vologda Region are given: 43 species of plants, three species of animals and one species of Cyanobacteria. [ABSTRACT FROM AUTHOR]

Large areas in the northern hemisphere are covered by extensive wetlands, which represent a complex mosaic of raised bogs, eutrophic fens, and aapa mires all in proximity to each other. Aapa mires differ from other types of wetlands by their concave surface, heavily watered by the central part, as well as by the presence of large-patterned string-flark complexes. In this paper, we characterized microbial diversity patterns in the surface peat layers of the neighboring string and flark structures located within the mire site in the Vologda region of European North Russia, using 16S rRNA gene sequencing. The microbial communities in raised strings were clearly distinct from those in submerged flarks. Strings were dominated by the Alpha- and Gammaproteobacteria. Other abundant groups were the Acidobacteriota, Bacteroidota, Verrucomicrobiota, Actinobacteriota, and Planctomycetota. Archaea accounted for only 0.4% of 16S rRNA gene sequences retrieved from strings. By contrast, they comprised about 22% of all sequences in submerged flarks and mostly belonged to methanogenic lineages. Methanotrophs were nearly absent. Other flark-specific microorganisms included the phyla Chloroflexi, Spirochaetota, Desulfobacterota, Beijerinckiaceae- and Rhodomicrobiaceae-affiliated Alphaproteobacteria, and uncultivated groups env.OPS_17 and vadinHA17 of the Bacteroidota. Such pattern probably reflects local anaerobic conditions in the submerged peat layers in flarks. [ABSTRACT FROM AUTHOR]

Large areas in Northern Russia are covered by extensive mires, which represent a complex mosaic of ombrotrophic raised bogs, minerotrophic and eutrophic fens, all in a close proximity to each other. In this paper, we compared microbial diversity patterns in the surface peat layers of the neighbouring raised bogs and eutrophic fens that are located within two geographically remote mire sites in Vologda region using 16S rRNA gene sequencing. Regardless of location, the microbial communities in raised bogs were highly similar to each other but were clearly distinct from those in eutrophic fens. Bogs were dominated by the Acidobacteria (30%–40% of total 16S rRNA gene reads), which belong to the orders Acidobacteriales and Bryobacterales. Other bog-specific bacteria included the Phycisphaera-like group WD2101 and the families Isosphaeraceae and Gemmataceae of the Planctomycetes, orders Opitutales and Pedosphaerales of the Verrucomicrobia and a particular group of alphaproteobacteria within the Rhizobiales. In contrast, fens hosted Anaerolineae-affiliated Chloroflexi, Vicinamibacteria- and Blastocatellia-affiliated Acidobacteria, Rokubacteria, uncultivated group OM190 of the Planctomycetes and several groups of betaproteobacteria. The Patescibacteria were detected in both types of wetlands but their relative abundance was higher in fens. A number of key parameters that define the distribution of particular bacterial groups in mires were identified. [ABSTRACT FROM AUTHOR]