1. Genomic resources for a historical collection of cultivated two-row European spring barley genotypes.
- Author
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Schreiber, Miriam, Wonneberger, Ronja, Haaning, Allison M., Coulter, Max, Russell, Joanne, Himmelbach, Axel, Fiebig, Anne, Muehlbauer, Gary J., Stein, Nils, and Waugh, Robbie
- Subjects
CULTIVARS ,GENOME-wide association studies ,GENE expression ,WHOLE genome sequencing ,GENOTYPES ,MALTING - Abstract
Barley genomic resources are increasing rapidly, with the publication of a barley pangenome as one of the latest developments. Two-row spring barley cultivars are intensely studied as they are the source of high-quality grain for malting and distilling. Here we provide data from a European two-row spring barley population containing 209 different genotypes registered for the UK market between 1830 to 2014. The dataset encompasses RNA-sequencing data from six different tissues across a range of barley developmental stages, phenotypic datasets from two consecutive years of field-grown trials in the United Kingdom, Germany and the USA; and whole genome shotgun sequencing from all cultivars, which was used to complement the RNA-sequencing data for variant calling. The outcomes are a filtered SNP marker file, a phenotypic database and a large gene expression dataset providing a comprehensive resource which allows for downstream analyses like genome wide association studies or expression associations. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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