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The Tibetan Plateau (TP) is one of the most challenging areas for human long-term settlement due to its extreme living environment. Understanding the relationship between human activities and environmental changes in this extreme environment is important and can provide a historical reference for adapting to future climate change. In this study, we took the Angren Basin in the southern TP as a case study to elucidate the relationship since Little Ice Age (LIA). Using fecal stanol in feces, lake and river surface sediments, surface soils, and sediment core, we found that specific indices S1 and S2 from the composition of coprostanol, epicoprostanol, 5β-ethylcoprostanol and 5β-ethylepicoprostanol can reflect changes in human population and herbivores, respectively. Through the comparison between environmental changes determined by grain size, elements, sedimentation rate, and other climate records, the relationship between human activities and environmental changes was interpreted. Our results indicate that: (i) during 1480-1820 CE, the fecal stanols in lake sediments mainly originated from livestock, and the human population was low. In contrast, during 1820-2021 CE, the proportion and flux of S1 have been continuously increasing, indicating significant population growth. (ii) During the middle LIA, the cold-dry climate inhibited the development of agriculture and farming. However, the increased precipitation during the late LIA promoted that development, resulting in an increase in human population and livestock in a short term. (iii) Since 1951, people have reclaimed wasteland and developed husbandry, leading to increased soil erosion. (iv) Over the past 40 years, with a warm-humid climate and good policy support, human activities, such as agriculture and husbandry, have rapidly increased, but soil erosion has declined in the recent 20 years due to good soil-water conservation efforts. This study sheds light on the relationship between human activities and environmental changes and provides insights into future climate change responses., Competing Interests: Declaration of competing interest The authors declare that they have no competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier B.V. All rights reserved.)

Objective: To investigate the prevalence and influencing factors of anemia children aged 0-6 years in Shannan city, Xizang Autonomous Region. Methods: A cross-sectional study was performed to measure hemoglobin of 12 405 children aged 0-6 years in 12 counties (districts) of Shannan city, Xizang Autonomous Region and basic information including gender, age, ethnicity, address, local altitude, urban area, agricultural and pastoral areas, etc were collected. According to the altitude of the surveyed children's place of residence, anemia in children under the plain standard and the prevalence of anemia after adjusting for altitude were reported, and the influencing factors of anemia in these children were analyzed by Logistic regression methods. Results: Among the 12 405 children, 6 383 (51.46%) were males, 6 022 (48.54%) were females, 462 (3.72%) were newborns, 68 (0.55%) were 1 month old children, 153 (1.23%) were 4-<6 months old children, and 11 722 (94.49%) were 6 months to 6 years old children. The prevalence of anemia in children aged 0-6 years in Shannan city before altitude correction was 15.50%(1 923/12 405), and it was 57.84% (7 175/12 405) after altitude correction. The hemoglobin level in the children was (131±20) g/L. Univariate analysis showed that the anemia rate of males was higher than that of females (59.17% (3 777/6 383) vs. 56.43% (3 398/6 022), P <0.05), the anemia rate of Tibetan children was higher than that of children of other ethnic groups (58.21% (6 992/12 011) vs. 46.45% (183/394), P <0.05), the anemia rate of children in agricultural and pastoral areas was higher than that of urban children (58.75% (6 212/10 574) vs .(52.59% 963/1 831), P <0.05), and the anemia rate of children in higher-altitude areas was higher than that of children in high-altitude areas (67.98% (2 773/4 079) vs .52.87% (4 402/8 326), P <0.05). Logistic regression analysis revealed that girls ( OR =0.89, 95% CI 0.83-0.96), children of other ethnic groups ( OR =0.72, 95% CI 0.58-0.89), children aged 4-<6 months ( OR =0.40, 95% CI 0.24-0.67) and children aged 6 months to 6 years ( OR =0.59, 95% CI 0.43-0.82) were protective factors, and children who lived in agricultural and pastoral areas ( OR =1.15, 95% CI 1.04-1.28) and children living at altitudes higher than 4 000 m areas ( OR =1.88, 95% CI 1.73-2.04) were independent risk factors for the occurrence of anemia. Conclusions: The prevalence of anemia in children aged 0-6 years in Shannan city was still relatively high. It might be affected by factors such as sex, ethnicity, age of the children, place of residence and altitude where the children lived.

Objectives: To investigate myopia progression and associated factors of refractive status among children and adolescents in Tibet and Chongqing in China during the COVID-19 pandemic., Methods: A population-based cross-sectional study was conducted to compare rates of myopia and high myopia, axial length (AL), spherical equivalent (SE), outdoor activity time, digital device use, and frequency of visual examinations for children and adolescents affected by myopia in Chongqing and Tibet in 2021., Results: A total of 2,303 students from Chongqing and 1,687 students from Tibet were examined. The overall prevalence of myopia and high myopia in these two groups were 53.80 and 7.04% vs. 43.86 and 1.30%, respectively in each case. The Chongqing students had a longer AL than the group from Tibet (23.95 vs. 23.40 mm, respectively; p < 0.001). The mean SE of the students with myopic parents in Tibet was lower than that of the students in Chongqing with myopic parents (-2.57 ± 2.38 diopters (D) vs. -2.30 ± 2.34 D, respectively) ( p < 0.001). Conversely, the mean SE of the students from urban areas in Chongqing was lower than that of the students in Tibet (-2.26 ± 2.25 D vs. -1.75 ± 1.96 D, respectively; p < 0.001). The Chongqing students exhibited lower SE (-2.44 ± 2.22 D) than their Tibetan counterparts (mean SE: -1.78 ± 1.65 D ( p = 0.0001) when spending more than 2.5 h outdoors. For example, 61.35% of the students in Tibet spent more than 2.5 h outdoors daily, compared with 43.04% of the students in Chongqing. Correspondingly, the proportion of students using digital devices in Tibet (64.43%) was lower than that in Chongqing (100%). For the latter, 38.62% of the students in Chongqing spent more than 2.5 h online using digital devices compared to 10.49% of the students in Tibet. Greater monitoring of visual status was observed for the Chongqing students (mean SE: -1.90 ± 1.98 D) compared with students in Tibet (mean SE: -2.68 ± 1.85 D) ( p = 0.0448), with the frequency of optimal examinations being every 6 months. Outdoor activity time was identified as a common risk factor for myopia in both of the populations examined, with odds ratios (ORs) of 1.84 (95% CI: 1.79-1.90) in Chongqing and 0.84 (95% CI: 0.73-0.96) in Tibet. Digital screen time was associated with myopia and high myopia in Chongqing, with ORs of 1.15 (95% CI: 1.08-1.22) and 1.06 (95% CI: 0.94-1.77), respectively. Digital screen time was also found to be a risk factor for high myopia in Tibet (OR: 1.21, 95% CI: 0.77-1.61). The type of digital devices used was also associated with myopia and high myopia in Tibet (OR: 1.33, 95% CI: 1.06-1.68 and OR: 1.49, 95% CI: 0.84-2.58, respectively). Finally, examination frequency was found to correlate with high myopia in the Tibet group (OR: 1.79, 95% CI: 0.66-2.71)., Conclusion: Based on our data, we observed that the prevalence of refractive errors in children and adolescents was significantly lower in Tibet than in Chongqing. These results are potentially due to prolonged outdoor activity time, and the type and time of use for digital devices that characterize the group of children and adolescents from Tibet. It is recommended that parents and children in Chongqing would benefit from increased awareness regarding myopia progression and its prevention., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Wang, Xiang, Zhu, Zheng, Ji, Lv, Xiong, Li, Yi, Huang, Zhang, Liu, Zhang, Wan and Hu.)

The aim of this study is to compare and analyze the structure and diversity of intestinal flora between gastric cancer patients and healthy people in the Qinghai-Tibet Plateau and to explore the characteristics of the intestinal flora composition in gastric cancer patients in the plateau area, and to determine the possible correlation between the intestinal flora and gastric cancer. Fresh feces from 22 cases of gastric cancer patients diagnosed in a tertiary hospital in Qinghai Province and 30 cases of healthy people during the same period were collected. The 52 subjects were undergone for 16S rDNA gene sequencing of intestinal bacteria to analyze and compare the diversity and compositional characteristics of intestinal flora. Analysis of the diversity of intestinal flora between the gastric cancer group and the healthy group was based on the Chao1 index of species richness, Shannon diversity index, and Simpson index. It showed that the gastric cancer group had no statistically difference from the healthy group (P > 0.05). In the Venn diagram, the number of OTU units shared by the gastric cancer group and the healthy group is 6997, and the number of unique OTU units in the healthy group is 2282, while the number of OTU units in the gastric cancer group is 896 and the difference is statistically significant (χ 2  = 495.829), P < 0.000). Analysis of the composition and abundance distribution of intestinal flora showed that at the phylum level, there is no significant deference in abundance between the healthy group of Bacteroides and Firmicutes compared with the gastric cancer group (P > 0.05). However, there is a statistically significant difference in abundance between the healthy groups of Proteobacteria compared with the gastric cancer group (P < 0.05). At the genus level, the gastric cancer group of Prevotella&#95;9 is significantly different from the healthy group (P < 0.05). Meanwhile, the gastric cancer group of Streptococcus and Lactobacillus are significantly different from the healthy group (P < 0.001). There are differences in the composition and abundance of intestinal flora between patients with gastric cancer and healthy people in plateau areas, suggesting that Proteobacteria, Prevotella&#95;9, Streptococcus, and Lactobacillus have increased in the Qinghai-Tibet Plateau and becoming one of the factors related to the incidence of gastric cancer in the region., (© 2021. The Author(s).)

Extremely heterogeneous topography and complex paleoclimatic history of the Qinghai-Tibet Plateau (QTP) have a key role in promoting genetic divergence among populations and lineage/species formation. Here, we sequenced one nuclear and three mitochondrial markers of 532 individuals from the entire range of the Phrynocephalus vlangalii species complex including two species, P. putjatai and P. vlangalii, endemic to the northern QTP. We integrated multilocus phylogeny, demographic analysis and geographic barrier detection to evaluate the population structure and dynamics. We found a new mitochondrial clade (PV-I) in the Gonghe County population of P. vlangalii, partial mitochondrial DNA replacement within P. vlangalii and complete mitochondrial DNA replacement between P. putjatai and P. vlangalii. Neutrality test, mismatch distribution analysis and Extended Bayesian Skyline Plot (EBSP) analysis all supported a significant expansion of the Qaidam Basin population of P. vlangalii (PV-II-2) from 0.091 to 0.026 Ma after Penultimate Glaciation. The uplift of the Arjin and Anyemanqen Mountains during the Kunhuang Movement (∼1.2 Ma) split populations of P. vlangalii in Akesai, Qaidam Basin and source of the Yellow River. The uplift of the Elashan Mountains during the second phase of the Qingzang Movement (∼2.5 Ma) contributed to the divergence of the Gonghe County population of P. vlangalii from other conspecific populations. The third phase of the Qingzang Movement (∼1.7 Ma) contributed to the divergence of the Xinghai population of P. vlangalii from P. putjatai and to the divergence of the northern populations of P. putjatai from the southern conspecific populations. Our data support the idea that the geological and climatic changes following the orogeny of the QTP may have promoted population differentiation and shaped the current population patterns of the P. vlangalii species complex in the northeastern QTP., (Copyright © 2022 Elsevier Inc. All rights reserved.)

Analogous to flow regime, this study proposed a new statistical framework to assess inter-annual and intra-annual terrestrial water storage (TWS) regime and its changes from the aspects of magnitude, variability, duration and components. The framework was applied to two endorheic basins, Inner Basin (IB) and Qaidam Basin (QB), in the Tibetan Plateau and their eight sub-regions. Our major findings are as follows: (1) TWS in the IB (2.09-2.35 mm/a, P < 0.05) and QB (0.05-0.52 mm/a, P > 0.1) increased in all seasons from 1989 to 2019 with regional climate warming and wetting. TWS showed high increase rates (>4.50 mm/a, P < 0.05) in northeastern IB but decrease rates (<-0.90 mm/a) in southern IB. Seasonal total storage in groundwater, lake, permafrost and glacier (GLPIA) also increased in both the IB (2.55-2.68 mm/a, P < 0.05) and QB (0.05-0.43 mm/a). Seasonal soil water storage (SWA) decreased in the IB (-0.39 to -0.26 mm/a) and slightly increased in the QB (0.002-0.08 mm/a); (2) Intra-annual TWS followed approximately a cosine curve. After mutation, monthly TWS showed a higher positive magnitude change (>50 mm), accompanied by a longer duration and higher variability in the IB and its northeastern sub-regions. There was a large reduction in low storage (-18.25 mm) combined with higher variability in southeastern IB; (3) SWA change dominated the storage surplus in summer (82%) and storage deficit in autumn (-78%) and winter (-51%) in the IB, while GLPIA change dominated the storage surplus in spring (57%). In the QB, TWS change was mainly contributed by SWA change in spring (94%) and by GLPIA change in summer (73%), autumn (-62%) and winter (-58%). Component contribution rates showed a significant change in spring and winter but not much change in summer and autumn, indicating that the TWS components were more sensitive to climate change in the cold season., Competing Interests: Declaration of competing interest None., (Copyright © 2022 Elsevier B.V. All rights reserved.)

Tibetan ethnic group is one of the oldest ethnic groups in China and South Asia. This study set out to analyze the dental development and validate Demirjian method and Willems method in estimating dental age of Tibetan children and adolescents, and to modify Demirjian method based on Tibetan population to provide ethnic-specific reference data and a more reliable method for forensic age assessment in Tibetan ethnic group. In this study, 1951 samples aged between 4 and 15 years were retrospectively collected and analyzed. Multiple linear regression was used to establish relationship between chronological age (CA) and developmental stages of left mandibular permanent teeth. The accuracy of the modified method was tested and compared with that of Demirjian and Willems method. Results showed that dental maturity score (DMS) was significantly greater in girls than in boys in all age groups except for the 4-year age group (p < 0.05). Mean absolute error (MAE) was 0.96 years for both boys and girls by Demirjian method, and 1.06 and 1.16 years for boys and girls respectively by Willems method. Adjusted scores table was established and tested. The age of boys was overestimated by 0.13 years and the age of girls was underestimated by 0.06 years by the adjusted scores table. MAE was lower than that of the other two methods. In conclusion, Demirjian method and Willems method was not sufficiently accurate in estimating dental age of Tibetan population. The modified method was more suitable for dental age estimation of Tibetan population than Demirjian and Willems method., (Copyright © 2022. Published by Elsevier B.V.)

Driven by increasingly stringent regulations on the legacy poly/perfluoroalkyl (PFASs), a variety of fluorinated alternatives have emerged on the market. Tibetan Plateau (TP) plays an important role in accumulation of organic pollutants due to its high altitude and wet deposition. In this study, the occurrence, spatial distribution and sources of PFASs in the TP soils were investigated. The total concentrations of PFASs ranged from 0.814-4.51 ng/g in the TP soils, with the identification of a variety of novel PFASs, including fluorotelomer sulfonates (FTSs), chlorinated polyfluorinated ether sulfonic acid (Cl-PFESAs), and hexafluoropropylene oxide (HFPO) homologues. Generally, the PFAS concentrations exhibited an increase trend from the west to east, and gradually increased with the altitude increasing, suggesting the impacts of human activities and mountain cold-trapping. The PFASs decreased with the increase of soil depth, but at different extents, which were related to their occurrence time, interactions with organic matters, and microbial transformation in soil. Most of the PFASs were present as free fractions in soil, particularly for the short-chain perfluoroalkyl acids (PFAAs), implying that they were liable to be accumulated in organisms and transport to groundwater. Multiple source apportionment analyses indicated that PFASs in the soil of TP were not only derived from the local pollution, but also from the atmospheric migration influenced by Indian Monsoon and westerly winds., (Copyright © 2021 The Authors. Published by Elsevier Ltd.. All rights reserved.)

The prevalence of coronary artery disease (CAD) in Tibetan Highlanders is lower than that in plain-living individuals, but the mechanism still unclear. Gut microbiota (GM) disorder is considered one of the potential factors involved in the pathogenesis of CAD, but the GM characteristics of Tibetan Highlanders suffering from CAD are unknown. We sequenced the V3-V4 region of the 16S ribosomal RNA of gut bacteria from fecal samples from Tibetan and Han CAD patients and healthy individuals inhabiting the Qinghai-Tibet Plateau, as well as from Han CAD patients and healthy individuals living at sea level, and we analyzed the GM characteristics of these subjects by bioinformatics analysis. The results showed that Tibetan Highlanders suffering from CAD had higher GM α-diversity, with differently distributed cluster compared with healthy Tibetan Highlanders and Han CAD patients living at high and low altitudes. Genera Catenibacterium, Clostridium&#95;sensu&#95;stricto, Holdemanella, and Ruminococcus 2 were enriched in Tibetan Highlanders suffering from CAD compared with healthy Tibetan Highlanders and Han CAD patients living at high- and low-altitudes. Prevotella was enriched in Tibetan Highlanders suffering from CAD compared with Han CAD patients living at high- and low-altitudes. Moreover, Catenibacterium was positively correlated with Prevotella. Additionally, Catenibacterium, Holdemanella, and Prevotella were positively correlated with fermented dairy product, carbohydrate and fiber intake by the subjects, while Clostridium&#95;sensu&#95;stricto was negatively correlated with protein intake by the subjects. In conclusion, our study indicated that Tibetan Highlanders suffering from CAD showed distinct GM, which was linked to their unique dietary characteristics and might associated with CAD., (© 2021. The Author(s).)

Studies of Holocene ostracods of the Tibetan Plateau have mostly centred around valves and carapaces collected from lake sediments, some at or near the substrate surface and others from short cores. Reports from habitats other than lakes are scarce, and few living species found in this region have appendages described, hindering further taxonomic and phylogenetic work. For this study collections of living ostracods were made in mostly ponds, as well as two rivers and one lake. Six species, including three previously undescribed, were recovered: Tonnacypris estonica (Järvekülg, 1960), Arctocypris edita n. sp., Cypris pubera O.F. Müller, 1776, Potamocypris variegata (Brady Norman, 1889), Ilyocypris tibeta n. sp., and Fabaeformiscandona monticulus n. sp. Specimens of Tonnacypris estonica include males, previously unknown for this species, and suggesting it is a geographical parthenogen. A revision of the fifth limb morphology of the genus Arctocypris, and a subsequent amended diagnosis of the genus are given. Based on carapace and appendage features, Eucypris mareotica (Fischer, 1855) is transferred to this genus: Arctocypris mareotica (Fischer, 1855) com. nov. There are now ca. 100 ostracod species reported from modern or subsurface sediments on the Tibetan Plateau, but only 19 of those can be confirmed as alive when collected (i.e. had appendages intact). The families Limnocytheridae and Ilyocyprididae are both relatively diverse on the plateau compared with the Palaearctic zoogeographical region generally. About one third of ostracod species reported from the Tibetan Plateau are only known from there, suggesting a potentially very high rate of endemism.

Climate change globally accelerates the shrinkage of inland lakes, resulting in increases in both water salinity and dissolved inorganic carbon (DIC). The increases of salinity and DIC generate contrasting effects on microbial primary producers and primary production, however, their combined effects remain unclear in aquatic ecosystems. We hypothesized that increased DIC mitigates the constraints of enhanced salinity on microbial primary producers and primary production. To test this, we employed isotope labeling and molecular methods to explore primary production and four dominant types of microbial primary producers (form IA, IB, IC and ID) in lakes on the Tibetan Plateau. Results showed that DIC was positively correlated with the abundance of the form IAB and ID microbial primary producers and primary production (all P < 0.001) and offset salinity constraints. Structural equation models elucidated that DIC substantially enhanced primary production by stimulating the abundance of form ID microbial primary producers. The abundance of form ID primary producers explained more variations (14.6%) of primary production than form IAB (6%) and physicochemical factors (6.8%). Diatoms (form ID) played a determinant role in primary production in the lakes by adapting to high DIC and high salinity. Our findings suggest that inland lakes may support higher primary productivity in future climate change scenarios., (© The Author(s) 2020. Published by Oxford University Press on behalf of FEMS.)

Brucellosis is one of the major zoonotic diseases in the world. In China, understanding on its causative agent Brucella is still limited. Recently, we isolated a Brucella strain XZ19-1 from yak in Lhasa, Tibet. Phenotypical characterization proved that it belongs to B. abortus biovar 4, a biotype that has never been reported in China. MLVA-16 genotyping revealed a novel profile (4-5-3-12-2-2-3-3-8-32-8-5-4-3-3-3) in this strain, while MLST sequence typing demonstrated that it belongs to ST 71. Furthermore, the whole genome of XZ19-1 strain was sequenced. Subsequent phylogenetic analysis demonstrated that XZ19-1was genetically more closely related to B. abortus strains originated from European countries rather than to those collected from China previously. Isolation and identification of XZ19-1 strain may thus indicate a unique Brucella lineage existing in Qing-Tibet plateau. These findings will help to improve the diagnosis and epidemiological studies of brucellosis in animals and human in this part of China., (Copyright © 2020. Published by Elsevier B.V.)

Environment has a potential effect on the animal symbiotic microbiome. Here, to study the potential relationship of the symbiotic microbiomes of wild amphibians with altitude, we collected the gut and skin samples from frogs (nine species) and the environmental samples (water and soil samples) from the Leshan Mountains (altitude: 360-410 m) and Gongga Mountains (altitude: 3340-3989 m) on the eastern edge of the Tibetan Plateau. Bufo gargarizans (Bg) samples were collected from both the Leshan and Gongga mountain regions (Bg was the only species sampled on both mountains). The DNA extracted from each sample was performed high-throughput sequencing (MiSeq) of bacterial 16S rRNA gene amplicons. High relative abundance of Caulobacteraceae and Sphingomonadaceae was found in skin samples from both Bg and the other high-altitude amphibians (nine species combined). High relative abundance of Coxiellaceae and Mycoplasmataceae was found in gut samples from both Bg and the other high-altitude amphibians. Furthermore, the alpha and beta diversities of skin and gut samples from Bg and the other amphibian species (nine species combined) were similar. In terms of the symbiotic microbial community, the low-altitude samples were less diverse and more similar to each other than the high-altitude samples were. We speculated that extreme high-altitude environments and host phylogeny may affect the amphibian microbiome. Despite the distinct microbial community differences between the skin and gut microbiomes, some functions were similar in the Bg and combined high-altitude samples. The Bg and high-altitude skin samples had higher oxidative stress tolerance and biofilm formation than the low-altitude skin samples. However, the opposite results were observed for the Bg and high-altitude gut samples. Further study is required to determine whether these characteristics favor high-altitude amphibian adaptation to extreme environments., (© 2020 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.)

Salinity is one of the most important environmental factors influencing bacterial plankton communities in lake waters, while its influence on bacterial interactions has been less explored. Here, we investigated the influence of salinity on the bacterial diversity, interactions and community structure in Tibetan Plateau lakes. Our results revealed that saline lakes (salinity between 0.5 and 50 g/L) harboured similar or even higher bacterial diversity compared with freshwater lakes (< 0.5 g/L), while hyper-saline lakes (> 50 g/L) exhibited the lowest diversity. Network analysis demonstrated that hyper-saline lakes exhibited the highest network complexity, with higher total correlation numbers (particularly the negative correlations), but lower network module numbers than freshwater and saline lakes. Furthermore, salinity dominantly explained the bacterial community structure variations in saline lakes, while those in freshwater and hyper-saline lakes were predominately explained by water temperature and geospatial distance, respectively. The core operational taxonomic units (OTUs), which were ubiquitously present in all lakes, were less sensitive to enhancing salinity than the indicative OTUs whose presence was dependent on lake type. Our findings offer a new understanding of how salinity influences bacterial community in plateau lakes., (© FEMS 2019.)

Tibetan pigs, indigenous to Tibetan plateau, are well adapted to hypoxia. So far, there have been not any definitively described genes and functional sites responsible for hypoxia adaptation for the Tibetan pig. The whole genome-wide association studies in human suggested that genetic variations in TMPRSS6 was associated with hemoglobin concentration (HGB) and red cell counts (RBC). Here we conducted resequencing of the nearly entire genomic region (40.1 kb) of the candidate gene TMPRSS6 in 40 domestic pigs and 40 wild boars along continuous altitudes and identified 708 SNPs, in addition to an indel (CGTG/----) in the intron 10. We conduct the CGTG indel in 838 domestic pigs, both the CGTG deletion frequency and the pairwise r 2 linkage disequilibrium showed an increase with elevated altitudes, suggesting that TMPRSS6 has been under Darwinian positive selection. As the conserved core sequence of hypoxia-response elements (HREs), the deletion of CGTG in Tibetan pigs decreased the expression levels of TMPRSS6 mRNA and protein in the liver revealed by real-time quantitative PCR and western blot, respectively. We compared domestic pigs and Tibetan pigs living continuous altitudes, found that the blood-related traits with the increase of altitude, however, the HGB did not increase with the elevation in Tibetan pigs. Genotype association analysis results dissected a genetic effect on reducing HGB by 13.25 g/L in Gongbo'gyamda Tibetan pigs, decreasing mean corpuscular volume (MCV) by 4.79 fl in Diqing Tibetan pigs. In conclusion, the CGTG deletion of TMPRSS6 resulted in lower HGB and smaller MCV, which could reflect a blunting erythropoiesis and improving blood viscosity as well as erythrocyte deformability. It remains to be determined whether a blunting of erythropoiesis for TMPRSS6 or others genetic effects are the physiological adaptations among Tibetan pigs., (Copyright © 2019. Published by Elsevier Inc.)

Cytochrome P4502E1 (CYP2E1) gene genetic polymorphisms vary markedly in frequency among different ethnic and racial groups.We studied the genotype distributions and allele frequencies of 3 CYP2E1 polymorphisms: CYP2E11A, CYP2E17A, and CYP2E17C by polymerase chain reaction technique in a sample of 100 healthy subjects representing Tibetan population.The frequencies of CYP2E11A, 7A, and 7C alleles were 0.705, 0.125, and 0.170, respectively. Compared with other populations, we found that the allele frequencies of the variants -352A>G (rs2070672) and -333A>T (rs2070673) in this Tibetan population have significant differences compared with European-American, African-American, Japanese, Korean, and other different geographic areas in Chinese Han population. Furthermore, the results of protein prediction revealed that the variant 6397G>A (rs61710826) could influence the protein structure and function.These findings in this study would be valuable for pharmacogenetics for drug therapy and drug discovery. However, further studies in larger samples are warranted to confirm our results., (Copyright © 2017 The Authors. Published by Wolters Kluwer Health, Inc. All rights reserved.)

The alpine treeline is commonly regarded as being sensitive to climatic warming because regeneration and growth of trees at treeline generally are limited by low temperature. The alpine treelines of the Tibetan Plateau (TP) occur at the highest elevations (4,900 m above sea level) in the Northern Hemisphere. Ongoing climatic warming is expected to shift treelines upward. Studies of treeline dynamics at regional and local scales, however, have yielded conflicting results, indicating either unchanging treeline elevations or upward shifts. To reconcile this conflict, we reconstructed in detail a century of treeline structure and tree recruitment at sites along a climatic gradient of 4 °C and mean annual rainfall of 650 mm on the eastern TP. Species interactions interacted with effects of warming on treeline and could outweigh them. Densification of shrubs just above treeline inhibited tree establishment, and slowed upward movement of treelines on a time scale of decades. Interspecific interactions are major processes controlling treeline dynamics that may account for the absence of an upward shift at some TP treelines despite continued climatic warming.

We report the sequencing at 131× coverage, de novo assembly and analyses of the genome of a female Tibetan wild boar. We also resequenced the whole genomes of 30 Tibetan wild boars from six major distributed locations and 18 geographically related pigs in China. We characterized genetic diversity, population structure and patterns of evolution. We searched for genomic regions under selection, which includes genes that are involved in hypoxia, olfaction, energy metabolism and drug response. Comparing the genome of Tibetan wild boar with those of neighboring Chinese domestic pigs further showed the impact of thousands of years of artificial selection and different signatures of selection in wild boar and domestic pig. We also report genetic adaptations in Tibetan wild boar that are associated with high altitudes and characterize the genetic basis of increased salivation in domestic pig.

An aerobic, asporous, flagellated, Gram-stain-positive, rod-shaped bacterium MD-T1-10-2(T) was isolated from the topsoil of Midui Glacier, Tibet Province, China. Phylogenetic analysis based on 16S rRNA gene sequence analysis placed the strain in a clade containing Mycetocola manganoxydans CCTCC AB 209002(T), Mycetocola reblochoni DSM 18580(T), Mycetocola tolaasinivorans JCM 11656(T), Mycetocola lacteus JCM 11654(T) and Mycetocola saprophilus JCM 11655(T), with the sequence similarities of 99.2, 98.1, 96.7, 96.6 and 96.4 %, respectively. DNA-DNA hybridization analysis indicated that strain MD-T1-10-2(T) represented a new member of this genus. The optimal ranges of temperature and pH for growth were 20-25 °C and 7.0-9.0, respectively; the strain could even grow at 0 °C. The major cellular fatty acids were anteiso-C15 : 0, iso-C16 : 0 and anteiso-C17 : 0. The predominant menaquinones were MK-10 and MK-11. The cell wall amino acids were lysine, alanine, glycine and glutamic acids. The DNA G+C content was 65.9 mol%. Based on the genotypic and phenotypic data, strain MD-T1-10-2(T) for which the name Mycetocola miduiensis sp. nov. is proposed; the type strain is MD-T1-10-2(T) ( = CGMCC 1.11101(T) = NBRC 107877(T)).

Background and Aims: Dendroclimatology is playing an important role in understanding past climatic changes on the Tibetan Plateau. Forests, however, are mainly confined to the eastern Tibetan Plateau. On the central Tibetan Plateau, in contrast, shrubs and dwarf shrubs need to be studied instead of trees as a source of climate information. The objectives of this study were to check the dendrochronological potential of the dwarf shrub Wilson juniper (Juniperus pingii var. wilsonii) growing from 4740 to 4780 m a.s.l. and to identify the climatic factors controlling its radial growth., Methods: Forty-three discs from 33 stems of Wilson juniper were sampled near the north-eastern shore of the Nam Co (Heavenly Lake). Cross-dating was performed along two directions of each stem, avoiding the compression-wood side as far as possible. A ring-width chronology was developed after a negative exponential function or a straight line of any slope had been fit to the raw measurements. Then, correlations were calculated between the standard ring-width chronology and monthly climate data recorded by a weather station around 100 km away., Key Results: Our study has shown high dendrochronological potential of Wilson juniper, based on its longevity (one individual was 324 years old), well-defined growth rings, reliable cross-dating between individuals and distinct climatic signals reflected by the ring-width variability. Unlike dwarf shrubs in the circum-arctic tundra ecosystem which positively responded to above-average temperature in the growing season, moisture turned out to be growth limiting for Wilson juniper, particularly the loss of moisture caused by high maximum temperatures in May-June., Conclusions: Because of the wide distribution of shrub and dwarf shrub species on the central Tibetan Plateau, an exciting prospect was opened up to extend the presently existing tree-ring networks far up into one of the largest tundra regions of the world.

Premise of the Study: Polymorphic microsatellite loci primers were developed in an alpine plant endemic to the Qinghai-Tibetan Plateau, Aconitum gymnandrum, to investigate its population genetic structure and cryptic speciation., Methods and Results: Using the combined biotin capture method, 16 polymorphic microsatellite loci were identified in 66 individuals from six geographically distant populations of A. gymnandrum. Across all the A. gymnandrum samples, the number of alleles per locus ranged from 4 to 15., Conclusions: These markers will be useful to study population structure and cryptic speciation of A. gymnandrum.