56 results on '"Ho, Chi Minh"'
Search Results
2. APPaRENT 3: Asthma Patients' and Physicians' Perspectives on the Burden and Management of Asthma in Seven Countries.
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Aggarwal B, Al-Moamary M, Allehebi R, Alzaabi A, Al-Ahmad M, Amin M, Damayanti T, Van Tho N, Quyen PTL, Sriprasart T, Poachanukoon O, Yu-Lin AB, Ismail AI, Limpin MEB, Koenig S, Levy G, Phansalkar A, Rafih F, Silvey M, Miriams L, and Milligan G
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- Humans, Male, Adult, Female, Cross-Sectional Studies, Middle Aged, Malaysia, United Arab Emirates, Vietnam, Saudi Arabia, Indonesia, Attitude of Health Personnel, Thailand, Philippines, Health Knowledge, Attitudes, Practice, Surveys and Questionnaires, Administration, Inhalation, Nebulizers and Vaporizers, Medication Adherence statistics & numerical data, Young Adult, Cost of Illness, Physicians psychology, Asthma drug therapy, Asthma therapy, Anti-Asthmatic Agents therapeutic use, Anti-Asthmatic Agents administration & dosage
- Abstract
Introduction: Asthma management is strongly dependent on physician and patient beliefs and perceptions about the disease and its long-term treatment. The APPaRENT 3 study was conducted to explore factors influencing treatment choice and to understand patients' and physicians' attitudes and perspectives on the use of controller inhalers in regular versus flexible dosing for asthma management., Methods: This cross-sectional survey of patients with asthma and treating physicians was conducted in seven countries: Indonesia, Malaysia, Philippines, Thailand, Vietnam (patient survey only), Saudi Arabia, and the United Arab Emirates. Assessment was carried out through an online/face-to-face questionnaire, where patients' viewpoints were focused on their attitudes and beliefs about asthma and treatment adherence, whereas physicians' viewpoints were gathered on their attitudes and beliefs about asthma management, knowledge of and adherence to asthma treatment guidelines, and asthma treatment regimens., Results: Overall, 1400 patients (mean age, 34 years) and 599 physicians (mean age, 43 years) were included in the survey. Physicians similarly prioritised symptom control (39%) and exacerbation reduction (40%) in moderate asthma, whereas patients prioritised symptom control (41%) over exacerbation reduction (22%). Although both groups (physicians, 86%; patients, 84%) perceived asthma as well-controlled, poor management was evident based on Asthma Control Test (ACT) scores (mean, 15.7; standard deviation, 4.14; 82% had an ACT score < 20) and high symptom burden (39% reported nighttime awakenings or early mornings ≥ 2 nights/week). Most patients (76%) with moderate asthma were prescribed regular dosing, with the most common treatment being inhaled corticosteroid (ICS)/long-acting β
2 -agonist (LABA) with as-needed inhaled short-acting β2 -agonist (SABA; 20%). Among patients on maintenance and reliever therapy, 93% of patients received a separate inhaled reliever., Conclusions: Despite high symptom burden, patients overestimated their level of asthma control. Physicians prioritised controlling symptoms and reducing exacerbations as treatment goals for moderate asthma, often prescribing regular dosing with ICS/LABA with as-needed inhaled SABA., (© 2024. The Author(s).)- Published
- 2024
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3. Time-varying causality relationships between trade openness, technological innovation, industrialization, financial development, and carbon emissions in Thailand.
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Thi Quy N, Hai NC, and Dao HTT
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- Thailand, Commerce economics, Carbon Dioxide analysis, Humans, Technology economics, Time Factors, Industrial Development trends, Inventions economics, Economic Development
- Abstract
Over the last twenty years, there has been swift growth in industrialization and technological advancements, driving economic progress. Nevertheless, it is inevitable that these sectors will bring about environmental shifts. Thus far, endeavors have been undertaken to assess the influence of industrialization and technological advancements on environmental deterioration. Additionally, the extensive discussion surrounding the impact of financial development, trade openness, and technological innovation on the environment has not yielded conclusive empirical findings. Studies often operate under the assumption of symmetric relationships, potentially leading to biased results. Adding to the discussion on the drivers of carbon neutrality, the time-dependent effects of critical aspects such as financial development and technological innovation should inform meaningful policies for environmental management. This article explores the time-varying causal association between trade openness, industrialization, financial development, technological innovation, and CO2 emissions in Thailand using novel time-varying Granger causality tests. The time-varying causality outcomes demonstrate that the associations change significantly over time, in contrast to the results of Toda-Yamamoto causality. Overall, there exists a bidirectional relationship between industrialization, financial development, trade openness, technological innovation, and CO2 emissions over different time sequences. These outcomes have implications for both policy and research., Competing Interests: The authors declare that they have no competing interests., (Copyright: © 2024 Thi Quy et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2024
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4. Evolutionary dynamics of canine kobuvirus in Vietnam and Thailand reveal the evidence of viral ability to evade host immunity.
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Van Nguyen T, Kasantikul T, Piewbang C, and Techangamsuwan S
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- Animals, Dogs, Thailand epidemiology, Vietnam epidemiology, Evolution, Molecular, Prevalence, Gastrointestinal Diseases virology, Gastrointestinal Diseases veterinary, Gastrointestinal Diseases epidemiology, Gastrointestinal Diseases immunology, Kobuvirus genetics, Kobuvirus immunology, Phylogeny, Dog Diseases virology, Dog Diseases epidemiology, Dog Diseases immunology, Picornaviridae Infections veterinary, Picornaviridae Infections virology, Picornaviridae Infections epidemiology, Picornaviridae Infections immunology
- Abstract
Canine kobuvirus (CaKoV) is a pathogen associated with canine gastrointestinal disease (GID). This study examined 327 rectal swabs (RS), including 113 from Vietnam (46 healthy, 67 with GID) and 214 from Thailand (107 healthy and 107 with GID). CaKoV was detected in both countries, with prevalences of 28.3% (33/113) in Vietnam and 7.9% (17/214) in Thailand. Additionally, CaKoV was found in both dogs with diarrhea and healthy dogs. CaKoV was mainly found in puppies under six months of age (30.8%). Co-detection with other canine viruses were also observed. The complete coding sequence (CDS) of nine Vietnamese and four Thai CaKoV strains were characterized. Phylogenetic analysis revealed a close genetic relationship between Vietnamese and Thai CaKoV strains, which were related to the Chinese strains. CDS analysis indicated a distinct lineage for two Vietnamese CaKoV strains. Selective pressure analysis on the viral capsid (VP1) region showed negative selection, with potential positive selection sites on B-cell epitopes. This study, the first of its kind in Vietnam, provides insights into CaKoV prevalence in dogs of different ages and healthy statuses, updates CaKoV occurrence in Thailand, and sheds light on its molecular characteristics and immune evasion strategies., (© 2024. The Author(s).)
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- 2024
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5. Women's caesarean section preferences: A multicountry cross-sectional survey in low- and middle-income countries.
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Etcheverry C, Betrán AP, de Loenzien M, Kaboré C, Lumbiganon P, Carroli G, Mac QNH, Gialdini C, and Dumont A
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- Humans, Female, Cross-Sectional Studies, Adult, Pregnancy, Burkina Faso, Thailand, Surveys and Questionnaires, Vietnam, Argentina, Developing Countries statistics & numerical data, Cesarean Section psychology, Cesarean Section statistics & numerical data, Patient Preference statistics & numerical data, Patient Preference psychology
- Abstract
Objective: To measure the proportion of women's preferences for CS in hospitals with high caesarean section rates and to identify related factors., Design: A cross-sectional hospital-based postpartum survey was conducted. We used multilevel multivariate logistic regression and probit models to analyse the association between women's caesarean section preferences and maternal characteristics. Probit models take into account selection bias while excluding women who had no preference., Setting: Thirty-two hospitals in Argentina, Thailand, Vietnam and Burkina Faso were selected., Participants: A total of 1,979 post-partum women with no potential medical need for caesarean section were included among a representative sample of women who delivered at each of the participating facilities during the data collection period., Findings: The overall caesarean section rate was 23.3 %. Among women who declared a preference in late pregnancy, 9 % preferred caesarean section, ranging from 1.8 % in Burkina Faso to 17.8 % in Thailand. Primiparous women were more likely to prefer a caesarean section than multiparous women (β=+0.16 [+0.01; +0.31]; p = 0.04). Among women who preferred caesarean section, doctors were frequently cited as the main influencers, and "avoid pain in labour" was the most common perceived benefit of caesarean section., Key Conclusions: Our results suggest that a high proportion of women prefer vaginal birth and highlight that the preference for caesarean section is linked to women's fear of pain and the influence of doctors. These results can inform the development of interventions aimed at supporting women and their preferences, providing them with evidence-based information and changing doctors' behaviour in order to reduce the number of unnecessary caesarean sections., Clinical Trial Registry: The QUALI-DEC trial is registered on the Current Controlled Trials website (https://www.isrctn.com/) under the number ISRCTN67214403., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier Ltd.)
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- 2024
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6. Microplastic Pollution in High Population Density Zones of Selected Rivers from Southeast Asia.
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Ta AT, Babel S, Nguyen LTP, and Sembiring E
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- Population Density, Asia, Southeastern, Thailand, Vietnam, Water Pollution, Chemical statistics & numerical data, Plastics analysis, Indonesia, Geologic Sediments chemistry, Rivers chemistry, Water Pollutants, Chemical analysis, Microplastics analysis, Environmental Monitoring
- Abstract
Southeast Asia (SEA) faces significant environmental challenges due to rapid population growth and economic activity. Rivers in the region are major sources of plastic waste in oceans. Concerns about their contribution have grown, but knowledge of microplastics in the area is still limited. This article compares microplastic levels in sediment and water from urban zones of three major rivers in SEA: Chao Phraya River (Thailand), Saigon River (Vietnam), and Citarum River (Indonesia). The study reveals that in all three rivers, microplastics were found, with the highest concentrations in Chao Phraya's water (80 ± 60 items/m
3 ) and Saigon's sediment (9167 ± 4559 items/kg). The variations in microplastic sizes and concentrations among these rivers may be attributed to environmental factors and the exposure duration of plastic to the environment. Since these rivers are important water supply sources, rigorous land-use regulations and raising public awareness are crucial to mitigate plastic and microplastic pollution., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2024
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7. Molecular characterization of Campylobacter spp. isolates obtained from commercial broilers and native chickens in Southern Thailand using whole genome sequencing.
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Phu DH, Wongtawan T, Wintachai P, Nhung NT, Yen NTP, Carrique-Mas J, Turni C, Omaleki L, Blackall PJ, and Thomrongsuwannakij T
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- Animals, Humans, Chickens genetics, Thailand epidemiology, Tylosin, Drug Resistance, Bacterial genetics, Anti-Bacterial Agents pharmacology, Whole Genome Sequencing veterinary, Microbial Sensitivity Tests veterinary, Campylobacter jejuni, Campylobacter Infections epidemiology, Campylobacter Infections veterinary, Campylobacter Infections microbiology, Campylobacter coli, Campylobacter genetics, Anti-Infective Agents
- Abstract
Chickens are the primary reservoirs of Campylobacter spp., mainly C. jejuni and C. coli, that cause human bacterial gastrointestinal infections. However, genomic characteristics and antimicrobial resistance of Campylobacter spp. in low- to middle-income countries need more comprehensive exploration. This study aimed to characterize 21 C. jejuni and 5 C. coli isolates from commercial broilers and native chickens using whole genome sequencing and compare them to 28 reference Campylobacter sequences. Among the 26 isolates, 13 sequence types (ST) were identified in C. jejuni and 5 ST in C. coli. The prominent ST was ST 2274 (5 isolates, 19.2%), followed by ST 51, 460, 2409, and 6455 (2 isolates in each ST, 7.7%), while all remaining ST (464, 536, 595, 2083, 6736, 6964, 8096, 10437, 828, 872, 900, 8237, and 13540) had 1 isolate per ST (3.8%). Six types of antimicrobial resistance genes (ant(6)-Ia, aph(3')-III, bla
OXA , cat, erm(B), and tet(O)) and one point mutations in the gyrA gene (Threonine-86-Isoleucine) and another in the rpsL gene (Lysine-43-Arginine) were detected. The blaOXA resistance gene was present in all isolates, the gyrA mutations was in 95.2% of C. jejuni and 80.0% of C. coli, and the tet(O) resistance gene in 76.2% of C. jejuni and 80.0% of C. coli. Additionally, 203 virulence-associated genes linked to 16 virulence factors were identified. In terms of phenotypic resistance, the C. jejuni isolates were all resistant to ciprofloxacin, enrofloxacin, and nalidixic acid, with lower levels of resistance to tetracycline (76.2%), tylosin (52.3%), erythromycin (23.8%), azithromycin (22.2%), and gentamicin (11.1%). Most C. coli isolates were resistant to all tested antimicrobials, while 1 C. coli was pan-susceptible except for tylosin. Single-nucleotide polymorphisms concordance varied widely, with differences of up to 13,375 single-nucleotide polymorphisms compared to the reference Campylobacter isolates, highlighting genetic divergence among comparative genomes. This study contributes to a deeper understanding of the molecular epidemiology of Campylobacter spp. in Thai chicken production systems., (Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.)- Published
- 2024
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8. Python farming as a flexible and efficient form of agricultural food security.
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Natusch D, Aust PW, Caraguel C, Taggart PL, Ngo VT, Alexander GJ, Shine R, and Coulson T
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- Animals, Female, Male, Farms, Thailand, Vietnam, Boidae physiology
- Abstract
Diminishing natural resources and increasing climatic volatility are impacting agri-food systems, prompting the need for sustainable and resilient alternatives. Python farming is well established in Asia but has received little attention from mainstream agricultural scientists. We measured growth rates in two species of large pythons (Malayopython reticulatus and Python bivittatus) in farms in Thailand and Vietnam and conducted feeding experiments to examine production efficiencies. Pythons grew rapidly over a 12-month period, and females grew faster than males. Food intake and growth rates early in life were strong predictors of total lifetime growth, with daily mass increments ranging from 0.24 to 19.7 g/day for M. reticulatus and 0.24 to 42.6 g/day for P. bivittatus, depending on food intake. Pythons that fasted for up to 4.2 months lost an average of 0.004% of their body mass per day, and resumed rapid growth as soon as feeding recommenced. Mean food conversion rate for dressed carcasses was 4.1%, with useable products (dressed carcass, skin, fat, gall bladder) comprising 82% of the mass of live animals. In terms of food and protein conversion ratios, pythons outperform all mainstream agricultural species studied to date. The ability of fasting pythons to regulate metabolic processes and maintain body condition enhances food security in volatile environments, suggesting that python farming may offer a flexible and efficient response to global food insecurity., (© 2024. The Author(s).)
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- 2024
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9. Primaquine in glucose-6-phosphate dehydrogenase deficiency: an adaptive pharmacometric assessment of ascending dose regimens in healthy volunteers.
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Pukrittayakamee S, Jittamala P, Watson JA, Hanboonkunupakarn B, Leungsinsiri P, Poovorawan K, Chotivanich K, Bancone G, Chu CS, Imwong M, Day NPJ, Taylor WRJ, and White NJ
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- Adult, Humans, Male, Healthy Volunteers, Hemoglobins, Hemolysis, Primaquine adverse effects, Thailand, Antimalarials therapeutic use, Glucosephosphate Dehydrogenase Deficiency, Malaria, Vivax drug therapy, Malaria, Vivax prevention & control
- Abstract
Background: Primaquine is an 8-aminoquinoline antimalarial. It is the only widely available treatment to prevent relapses of Plasmodium vivax malaria. The 8-aminoquinolines cause dose-dependent haemolysis in glucose-6-phosphate dehydrogenase deficiency (G6PDd). G6PDd is common in malaria endemic areas but testing is often not available. As a consequence primaquine is underused., Methods: We conducted an adaptive pharmacometric study to characterise the relationship between primaquine dose and haemolysis in G6PDd. The aim was to explore shorter and safer primaquine radical cure regimens compared to the currently recommended 8-weekly regimen (0.75 mg/kg once weekly), potentially obviating the need for G6PD testing. Hemizygous G6PDd healthy adult Thai and Burmese male volunteers were admitted to the Hospital for Tropical Diseases in Bangkok. In Part 1, volunteers were given ascending dose primaquine regimens whereby daily doses were increased from 7.5 mg up to 45 mg over 15-20 days. In Part 2 conducted at least 6 months later, a single primaquine 45 mg dose was given., Results: 24 volunteers were enrolled in Part 1, and 16 in Part 2 (13 participated in both studies). In three volunteers, the ascending dose regimen was stopped because of haemolysis (n=1) and asymptomatic increases in transaminases (n=2; one was hepatitis E positive). Otherwise the ascending regimens were well tolerated with no drug-related serious adverse events. In Part 1, the median haemoglobin concentration decline was 3.7 g/dL (range: 2.1-5.9; relative decline of 26% [range: 15-40%]). Primaquine doses up to 0.87 mg/kg/day were tolerated subsequently without clinically significant further falls in haemoglobin. In Part 2, the median haemoglobin concentration decline was 1.7 g/dL (range 0.9-4.1; relative fall of 12% [range: 7-30% decrease]). The ascending dose primaquine regimens gave seven times more drug but resulted in only double the haemoglobin decline., Conclusions: In patients with Southeast Asian G6PDd variants, full radical cure treatment can be given in under 3 weeks compared with the current 8-week regimen., Funding: Medical Research Council of the United Kingdom (MR/R015252/1) and Wellcome (093956/Z/10/C, 223253/Z/21/Z)., Clinical Trial Number: Thai Clinical Trial Registry: TCTR20170830002 and TCTR20220317004., Competing Interests: SP, PJ, JW, BH, PL, KP, KC, GB, CC, MI, ND, WT, NW No competing interests declared, (© 2023, Pukrittayakamee et al.)
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- 2024
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10. The characterization and correlation between the phenotypic and genotypic resistance of Campylobacter spp . isolates from commercial broilers and native chickens in the south of Thailand.
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Phu DH, Narinthorn R, Nhung NT, Chansiripornchai N, Blackall PJ, Turni C, Carrique-Mas J, and Thomrongsuwannakij T
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- Animals, Chickens, Thailand epidemiology, Anti-Bacterial Agents pharmacology, Drug Resistance, Bacterial genetics, Microbial Sensitivity Tests veterinary, Campylobacter jejuni genetics, Campylobacter Infections epidemiology, Campylobacter Infections veterinary, Campylobacter, Campylobacter coli genetics
- Abstract
Research Highlights: High Campylobacter prevalence in chickens; C. jejuni more prevalent than C. coli .Susceptibility to macrolides but resistance to quinolones/tetracyclines in isolates.Homogeneous resistance patterns within farms; higher in broilers than in native birds.Partial association between phenotypic and genotypic resistance among isolates.
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- 2024
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11. How does hospital organisation influence the use of caesarean sections in low- and middle-income countries? A cross-sectional survey in Argentina, Burkina Faso, Thailand and Vietnam for the QUALI-DEC project.
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Etcheverry C, Betrán AP, de Loenzien M, Robson M, Kaboré C, Lumbiganon P, Carroli G, Mac QNH, Gialdini C, and Dumont A
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- Pregnancy, Female, Humans, Cross-Sectional Studies, Argentina, Burkina Faso, Thailand, Vietnam, Hospitals, Cesarean Section, Developing Countries
- Abstract
Background: Improving the understanding of non-clinical factors that lead to the increasing caesarean section (CS) rates in many low- and middle-income countries is currently necessary to meet the challenge of implementing effective interventions in hospitals to reverse the trend. The objective of this study was to study the influence of organizational factors on the CS use in Argentina, Vietnam, Thailand and Burkina Faso., Methods: A cross-sectional hospital-based postpartum survey was conducted in 32 hospitals (8 per country). We selected women with no potential medical need for CS among a random sample of women who delivered at each of the participating facilities during the data collection period. We used multilevel multivariable logistic regression to analyse the association between CS use and organizational factors, adjusted on women's characteristics., Results: A total of 2,092 low-risk women who had given birth in the participating hospitals were included. The overall CS rate was 24.1%, including 4.9% of pre-labour CS and 19.3% of intra-partum CS. Pre-labour CS was significantly associated with a 24-hour anaesthetist dedicated to the delivery ward (ORa = 3.70 [1.41; 9.72]) and with the possibility to have an individual room during labour and delivery (ORa = 0.28 [0.09; 0.87]). Intra-partum CS was significantly associated with a higher bed occupancy level (ORa = 1.45 [1.09; 1.93]): intrapartum CS rate would increase of 6.3% points if the average number of births per delivery bed per day increased by 10%., Conclusion: Our results suggest that organisational norms and convenience associated with inadequate use of favourable resources, as well as the lack of privacy favouring women's preference for CS, and the excessive workload of healthcare providers drive the CS overuse in these hospitals. It is also crucial to enhance human and physical resources in delivery rooms and the organisation of intrapartum care to improve the birth experience and the working environment for those providing care., Trial Registration: The QUALI-DEC trial is registered on the Current Controlled Trials website ( https://www.isrctn.com/ ) under the number ISRCTN67214403., (© 2024. The Author(s).)
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- 2024
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12. Implementing the QUALI-DEC project in Argentina, Burkina Faso, Thailand and Viet Nam: a process delineation and theory-driven process evaluation protocol.
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Cleeve A, Annerstedt KS, Betrán AP, Mölsted Alvesson H, Kaboré Wendyam C, Carroli G, Lumbiganon P, Nhu Hung MQ, Zamboni K, Opiyo N, Bohren MA, El Halabi S, Gialdini C, Vila Ortiz M, Escuriet R, Robson M, Dumont A, and Hanson C
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- Pregnancy, Infant, Newborn, Humans, Female, Burkina Faso, Argentina, Thailand, Vietnam, Cross-Sectional Studies
- Abstract
The project 'Quality Decision-making by women and providers' (QUALI-DEC) combines four non-clinical interventions to promote informed decision-making surrounding mode of birth, improve women's birth experiences, and reduce caesarean sections among low-risk women. QUALI-DEC is currently being implemented in 32 healthcare facilities across Argentina, Burkina Faso, Thailand, and Viet Nam. In this paper, we detail implementation processes and the planned process evaluation, which aims to assess how and for whom QUALI-DEC worked, the mechanisms of change and their interactions with context and setting; adaptations to intervention and implementation strategies, feasibility of scaling-up, and cost-effectiveness of the intervention. We developed a project theory of change illustrating how QUALI-DEC might lead to impact. The theory of change, together with on the ground observations of implementation processes, guided the process evaluation strategy including what research questions and perspectives to prioritise. Main data sources will include: 1) regular monitoring visits in healthcare facilities, 2) quantitative process and output indicators, 3) a before and after cross-sectional survey among post-partum women, 4) qualitative interviews with all opinion leaders, and 5) qualitative interviews with postpartum women and health workers in two healthcare facilities per country, as part of a case study approach. We foresee that the QUALI-DEC process evaluation will generate valuable information that will improve interpretation of the effectiveness evaluation. At the policy level, we anticipate that important lessons and methodological insights will be drawn, with application to other settings and stakeholders looking to implement complex interventions aiming to improve maternal and newborn health and wellbeing. Trial registration : ISRCTN67214403.
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- 2023
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13. From bites to barcodes: uncovering the hidden diversity of black flies (Diptera: Simuliidae) in Vietnam.
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Putt QY, Ya'cob Z, Adler PH, Chen CD, Hew YX, Izwan-Anas N, Lau KW, Sofian-Azirun M, Pham XD, Takaoka H, and Low VL
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- Animals, Humans, Vietnam, DNA Barcoding, Taxonomic methods, Phylogeny, Thailand, Larva, Simuliidae genetics, Bites and Stings
- Abstract
Background: Prompt and precise identification of black flies (Simuliidae) is crucial, given their biting behaviour and significant impact on human and animal health. To address the challenges presented by morphology and chromosomes in black fly taxonomy, along with the limited availability of molecular data pertaining to the black fly fauna in Vietnam, this study employed DNA-based approaches. Specifically, we used mitochondrial and nuclear-encoded genes to distinguish nominal species of black flies in Vietnam., Methods: In this study, 135 mitochondrial cytochrome c oxidase subunit I (COI) sequences were established for 45 species in the genus Simulium in Vietnam, encompassing three subgenera (Gomphostilbia, Nevermannia, and Simulium), with 64 paratypes of 27 species and 16 topotypes of six species. Of these COI sequences, 71, representing 27 species, are reported for the first time., Results: Combined with GenBank sequences of specimens from Malaysia, Myanmar, Thailand, and Vietnam, a total of 234 DNA barcodes of 53 nominal species resulted in a 71% success rate for species identification. Species from the non-monophyletic Simulium asakoae, S. feuerborni, S. multistriatum, S. striatum, S. tuberosum, and S. variegatum species groups were associated with ambiguous or incorrect identifications. Pairwise distances, phylogenetics, and species delimitation analyses revealed a high level of cryptic diversity, with discovery of 15 cryptic taxa. The current study also revealed the limited utility of a fast-evolving nuclear gene, big zinc finger (BZF), in discriminating closely related, morphologically similar nominal species of the S. asakoae species group., Conclusion: This study represents the first comprehensive molecular genetic analysis of the black fly fauna in Vietnam to our knowledge, providing a foundation for future research. DNA barcoding exhibits varying levels of differentiating efficiency across species groups but is valuable in the discovery of cryptic diversity., (© 2023. BioMed Central Ltd., part of Springer Nature.)
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- 2023
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14. Movement disorders in Indochina: Resource challenges and future solutions.
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Bhidayasiri R, Sringean J, Van Le T, Lim TT, Navuth C, Phoumindr A, Aye YM, Phumphid S, Vorachit S, Veasna K, Ibrahim NM, Thit WM, Rosales RL, Le M, and Tran NT
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- Humans, Indochina, Asia, Southeastern epidemiology, Vietnam epidemiology, Thailand, Movement Disorders
- Abstract
Movement disorders are a major cause of disability worldwide and their increasing prevalence predicts a substantial future burden of care. Impactful patient care requires availability of, and accessibility to, effective medications, knowledge, and disease awareness among both medical professionals and patients, driven by skilled personnel to harness and manage resources. The highest burden of movement disorders is in low-to-middle income countries where resources are often limited and infrastructure is insufficient to meet growing demands. This article focuses on the specific challenges faced in the management and delivery of care for movement disorders in Indochina, the mainland region of Southeast Asia comprising the neighboring countries of Cambodia, Laos, Malaysia, Myanmar, Thailand, and Vietnam. The first Indochina Movement Disorders Conference was held in August 2022 in Ho Chi Minh City, Vietnam, to provide a platform to better understand the situation in the region. Future management of movement disorders in Indochina will require progressive adaptation of existing practices to reflect modern approaches to care delivery. Digital technologies offer an opportunity to strengthen these processes and address the challenges identified in the region. Ultimately, a long-term collaborative approach by regional healthcare providers is key., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.)
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- 2023
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15. Pregnancy and birth outcomes among young women living with perinatally acquired HIV in Thailand and Vietnam.
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Lumbiganon P, Kariminia A, Anugulruengkitt S, Ounchanum P, Denjanta S, Puthanakit T, Kosalaraksa P, Sudjaritruk T, Detsakunathiwatchara C, Do VC, Vu AT, Nguyen LV, Thuy GTT, Suwanlerk T, Sohn AH, and IeDEA Asia-Pacific
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- Pregnancy, Infant, Young Adult, Adolescent, Humans, Male, Female, Retrospective Studies, Thailand epidemiology, Vietnam epidemiology, Infectious Disease Transmission, Vertical prevention & control, RNA, Pregnancy Outcome epidemiology, Pregnancy Complications, Infectious epidemiology, HIV Infections prevention & control
- Abstract
We conducted a retrospective cohort study of pregnancy and infant outcomes in 670 adolescents and young adult women with perinatally acquired HIV (AYAPHIV), aged 15-24 years, in Thailand and Vietnam. Between January 2013 and December 2018, there were 52 pregnancies, for an incidence of 2.49 (95% CI 1.90-3.27) per 100 person-years. The median age at pregnancy was 17.7 years (IQR 16.8-18.9). Pregnant AYAPHIV had been on cART for a lifetime median of 9.8 years (IQR 7.3-12.4). At the time of conception, the median CD4 was 521 cells/mm
3 (IQR 213-760), and 76% had HIV RNA ≤400 copies/ml. Of the 51 pregnancies with available outcomes, 90% resulted in live singleton births at a median gestational age of 38 weeks (IQR 37-39); 77% of mothers (n = 27/35) had HIV RNA ≤400 copies/ml at delivery. Among infants with available data, 50% (n = 21/42) were male and 29% (n = 12/42) were reported to be low birthweight (<2,500gm); none (n = 0/41) were breastfed. One infant was diagnosed with HIV. Our findings emphasize that efforts to strengthen reproductive health education, including contraception, pregnancy-related psychosocial support services, and prevention of vertical HIV transmission interventions, in our region are needed for adolescents with perinatally acquired HIV as they transition to young adults.- Published
- 2023
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16. Distribution and origins of Mycobacterium tuberculosis L4 in Southeast Asia.
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Ashton PM, Cha J, Anscombe C, Thuong NTT, Thwaites GE, and Walker TM
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- Humans, Asia, Southeastern epidemiology, Phylogeography, Thailand, Mycobacterium tuberculosis genetics, Tuberculosis epidemiology, Tuberculosis microbiology
- Abstract
Molecular and genomic studies have revealed that Mycobacterium tuberculosis Lineage 4 (L4, Euro-American lineage) emerged in Europe before becoming distributed around the globe by trade routes, colonial migration and other historical connections. Although L4 accounts for tens or hundreds of thousands of tuberculosis (TB) cases in multiple Southeast Asian countries, phylogeographical studies have either focused on a single country or just included Southeast Asia as part of a global analysis. Therefore, we interrogated public genomic data to investigate the historical patterns underlying the distribution of L4 in Southeast Asia and surrounding countries. We downloaded 6037 genomes associated with 29 published studies, focusing on global analyses of L4 and Asian studies of M. tuberculosis . We identified 2256 L4 genomes including 968 from Asia. We show that 81 % of L4 in Thailand, 51 % of L4 in Vietnam and 9 % of L4 in Indonesia belong to sub-lineages of L4 that are rarely seen outside East and Southeast Asia (L4.2.2, L4.4.2 and L4.5). These sub-lineages have spread between East and Southeast Asian countries, with no recent European ancestor. Although there is considerable uncertainty about the exact direction and order of intra-Asian M. tuberculosis dispersal, due to differing sampling frames between countries, our analysis suggests that China may be the intermediate location between Europe and Southeast Asia for two of the three predominantly East and Southeast Asian L4 sub-lineages (L4.2.2 and L4.5). This new perspective on L4 in Southeast Asia raises the possibility of investigating host population-specific evolution and highlights the need for more structured sampling from Southeast Asian countries to provide more certainty of the historical and current routes of dispersal.
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- 2023
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17. Obesity in South and Southeast Asia-A new consensus on care and management.
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Tham KW, Abdul Ghani R, Cua SC, Deerochanawong C, Fojas M, Hocking S, Lee J, Nam TQ, Pathan F, Saboo B, Soegondo S, Somasundaram N, Yong AML, Ashkenas J, Webster N, and Oldfield B
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- Child, Humans, Consensus, Asia, Southeastern epidemiology, Thailand, Obesity complications, Obesity epidemiology, Obesity therapy, Quality of Life, Developing Countries
- Abstract
Obesity is a chronic disease in which the abnormal or excessive accumulation of body fat leads to impaired health and increased risk of mortality and chronic health complications. Prevalence of obesity is rising rapidly in South and Southeast Asia, with potentially serious consequences for local economies, healthcare systems, and quality of life. Our group of obesity specialists from Bangladesh, Brunei Darussalam, India, Indonesia, Malaysia, Philippines, Singapore, Sri Lanka, Thailand, and Viet Nam undertook to develop consensus recommendations for management and care of adults and children with obesity in South and Southeast Asia. To this end, we identified and researched 12 clinical questions related to obesity. These questions address the optimal approaches for identifying and staging obesity, treatment (lifestyle, behavioral, pharmacologic, and surgical options) and maintenance of reduced weight, as well as issues related to weight stigma and patient engagement in the clinical setting. We achieved consensus on 42 clinical recommendations that address these questions. An algorithm describing obesity care is presented, keyed to the various consensus recommendations., (© 2022 The Authors. Obesity Reviews published by John Wiley & Sons Ltd on behalf of World Obesity Federation.)
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- 2023
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18. Estimating economic and disease burden of snakebite in ASEAN countries using a decision analytic model.
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Patikorn C, Blessmann J, Nwe MT, Tiglao PJG, Vasaruchapong T, Maharani T, Doan UV, Zainal Abidin SA, Ismail AK, Othman I, Taychakhoonavudh S, and Chaiyakunapruk N
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- Antivenins therapeutic use, Asia, Southeastern epidemiology, Cost of Illness, Humans, Thailand, Snake Bites epidemiology, Snake Bites therapy
- Abstract
Background: Understanding the burden of snakebite is crucial for developing evidence-informed strategies to pursue the goal set by the World Health Organization to halve morbidity and mortality of snakebite by 2030. However, there was no such information in the Association of Southeast Asian Nations (ASEAN) countries., Methodology: A decision analytic model was developed to estimate annual burden of snakebite in seven countries, including Malaysia, Thailand, Indonesia, Philippines, Vietnam, Lao PDR, and Myanmar. Country-specific input parameters were sought from published literature, country's Ministry of Health, local data, and expert opinion. Economic burden was estimated from the societal perspective. Costs were expressed in 2019 US Dollars (USD). Disease burden was estimated as disability-adjusted life years (DALYs). Probabilistic sensitivity analysis was performed to estimate a 95% credible interval (CrI)., Principal Findings: We estimated that annually there were 242,648 snakebite victims (95%CrI 209,810-291,023) of which 15,909 (95%CrI 7,592-33,949) were dead and 954 (95%CrI 383-1,797) were amputated. We estimated that 161,835 snakebite victims (69% of victims who were indicated for antivenom treatment) were not treated with antivenom. Annual disease burden of snakebite was estimated at 391,979 DALYs (95%CrI 187,261-836,559 DALYs) with total costs of 2.5 billion USD (95%CrI 1.2-5.4 billion USD) that were equivalent to 0.09% (95%CrI 0.04-0.20%) of the region's gross domestic product. >95% of the estimated burdens were attributed to premature deaths., Conclusion/significance: The estimated high burden of snakebite in ASEAN was demonstrated despite the availability of domestically produced antivenoms. Most burdens were attributed to premature deaths from snakebite envenoming which suggested that the remarkably high burden of snakebite could be averted. We emphasized the importance of funding research to perform a comprehensive data collection on epidemiological and economic burden of snakebite to eventually reveal the true burden of snakebite in ASEAN and inform development of strategies to tackle the problem of snakebite., Competing Interests: The authors have declared that no competing interests exist.
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- 2022
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19. Enhanced bedside mortality prediction combining point-of-care lactate and the quick Sequential Organ Failure Assessment (qSOFA) score in patients hospitalised with suspected infection in southeast Asia: a cohort study.
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Wright SW, Hantrakun V, Rudd KE, Lau CY, Lie KC, Chau NVV, Teparrukkul P, West TE, and Limmathurotsakul D
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- Adult, Cohort Studies, Hospital Mortality, Humans, Intensive Care Units, Lactic Acid analysis, Point-of-Care Systems, Prognosis, Retrospective Studies, Thailand, Organ Dysfunction Scores, Sepsis diagnosis
- Abstract
Background: Simple, bedside prediction of infection-related mortality in low-resource settings is crucial for triage and resource-utilisation decisions. We aimed to evaluate mortality prediction by combining point-of-care venous lactate with the quick Sequential Organ Failure Assessment (qSOFA) score in adult patients admitted to hospital with suspected infection in southeast Asia., Methods: We performed a cohort study by prospectively enrolling patients aged 18 years or older who had been admitted to hospital within the previous 24 h for suspected infection (with at least three documented systemic manifestations of infection according to the 2012 Surviving Sepsis Campaign) at Sunpasitthiprasong Hospital in Ubon Ratchathani, Thailand (derivation cohort). Venous lactate concentration was determined by a point-of-care device and multiple scores were developed. We then evaluated candidate 28-day mortality prediction models combining qSOFA and the lactate scores. A final model was compared with the qSOFA score, a lactate score, and a modified Sequential Organ Failure Assessment (SOFA) score for mortality discrimination using the area under the receiver operating characteristic curve (AUROC). Mortality discrimination of the qSOFA-lactate score was then verified in an external, prospectively enrolled, multinational cohort in southeast Asia., Findings: Between March 1, 2013, and Jan 26, 2017, 5001 patients were enrolled in the derivation cohort; 4980 had point-of-care lactate data available and were eligible for analysis, and 816 died within 28 days of enrolment. The discrimination for 28-day mortality prediction of a qSOFA-lactate score combining the qSOFA score and a lactate score was superior to that of the qSOFA score alone (AUROC 0·78 [95% CI 0·76-0·80] vs 0·68 [0·67-0·70]; p<0·0001) and similar to a modified SOFA score (0·77 [0·75-0·78]; p=0·088). A lactate score alone had superior discrimination compared with the qSOFA score (AUROC 0·76 [95% CI 0·74-0·78]; p<0·0001). 815 patients were enrolled in the external validation cohort and 792 had point-of-care lactate data and were included in the analysis; the qSOFA-lactate score (AUROC 0·77 [95% CI 0·73-0·82]) showed significantly improved 28-day mortality discrimination compared with the qSOFA score alone (0·69 [0·63-0·74]; p<0·0001)., Interpretation: In southeast Asia, rapid, bedside assessments based on point-of-care lactate concentration combined with the qSOFA score can identify patients at risk of sepsis-related mortality with greater accuracy than the qSOFA score alone, and with similar accuracy to a modified SOFA score., Funding: National Institutes of Health, Wellcome Trust., Competing Interests: Declaration of interests We declare no competing interests., (Copyright © 2022 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY 4.0 license. Published by Elsevier Ltd.. All rights reserved.)
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- 2022
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20. Cercopithifilaria spp. in ticks of companion animals from Asia: new putative hosts and vectors.
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Bezerra-Santos MA, de Macedo LO, Nguyen VL, Manoj RR, Laidoudi Y, Latrofa MS, Beugnet F, and Otranto D
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- Animals, Cats, Dogs, Pets, Taiwan, Thailand, Cat Diseases epidemiology, Dog Diseases epidemiology, Filarioidea genetics, Ixodidae, Rhipicephalus sanguineus
- Abstract
Cercopithifilaria bainae, Cercopithifilaria grassi, and Cercopithifilaria sp. II sensu Otranto et al., 2013 tick borne filarioids are typically found in dogs. Among them, Cercopithifilaria bainae has a worldwide distribution according to the occurrence of its tick vector, Rhipicephalus sanguineus sensu lato (s.l.). Nevertheless, in Asian countries, despite the wide presence of this tick species, data on Cercopithifilaria spp. are scant. Therefore, this study aimed to assess the occurrence of these dermal filarioids in ixodid ticks collected on dogs and cats from Asian countries, providing a better epidemiological picture on their distribution in this continent. Ticks (n = 687) of the species Rhipicephalus sanguineus s. l. (n = 667), Rhipicephalus haemaphysaloides (n = 8), Haemaphysalis longicornis (n = 7), Haemaphysalis campanulata (n = 1), Haemaphysalis wellingtoni (n = 2), Haemaphysalis hystricis (n = 1), and Ixodes sp. (n = 1) were collected on dogs and cats under the frame of previous studies in China, India, Indonesia, Malaysia, Singapore, Taiwan, Thailand, the Philippines and Vietnam. Tick samples were molecularly screened for Cercopithifilaria spp. by conventional PCR and real-time PCR using two pair of primers targeting partial sequences of cytochrome c oxidase 1 gene. Overall, Cercophitifilaria spp. DNA was detected in 9.5% (n = 65/687) of the tick specimens tested, with C. bainae being the most prevalent species (8.9%), followed by C. grassii (0.6%). Most Cercophitifilaria spp. positive ticks were collected on dogs (92.3%; 60/65); whereas ticks collected on cats represented 7.7% of the positive specimens. In addition, Cercopithifilaria spp. were mostly detected in R. sanguineus s.l. ticks (96.9%; 63/65), followed by Rhipicephalus haemaphysaloides (3.1%; 2/65). Data herein presented demonstrate the occurrence of dermal tick borne filarioids of the genus Cercopithifilaria in several Asian countries, with C. bainae being the most prevalent species. We also report for the first time the molecular detection of C. bainae in R. sanguineus s.l. ticks collected on cats, as well as in R. haemaphysaloides ticks, suggesting that the biological cycle of this filarioid species may involve other intermediate and definitive hosts than R. sanguineus s.l. and dogs. However, confirmatory studies on the role of other tick species and domestic cats on the biology of C. bainae are advocated., (Copyright © 2022. Published by Elsevier GmbH.)
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- 2022
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21. Direct healthcare costs associated with management of asthma: comparison of two treatment regimens in Indonesia, Thailand and Vietnam.
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Aggarwal B, Jones PW, Yunus F, Lan LTT, Boonsawat W, Ismaila A, and Ascioglu S
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- Administration, Inhalation, Budesonide economics, Budesonide therapeutic use, Budesonide, Formoterol Fumarate Drug Combination economics, Drug Combinations, Ethanolamines therapeutic use, Formoterol Fumarate therapeutic use, Health Care Costs, Humans, Indonesia, Thailand, Vietnam, Adrenal Cortex Hormones therapeutic use, Asthma drug therapy, Asthma economics, Budesonide, Formoterol Fumarate Drug Combination therapeutic use
- Abstract
Objective: Daily inhaled corticosteroid (ICS) and long-acting beta-2-agonist (LABA) combinations comprising either regular maintenance therapy with ICS/LABA plus as-needed short-acting beta-2-agonist (SABA) or ICS-formoterol combinations used as maintenance and reliever therapy (MART) are recommended for moderate asthma. This analysis compares the direct costs of twice-daily fluticasone propionate/salmeterol (FP/salm) and budesonide/formoterol MART in three Southeast Asian countries., Methods: A literature review identified three randomized trials in patients with asthma (≥ 12 years) comparing regular twice-daily FP/salm with as-needed SABA versus MART in moderate asthma: AHEAD (NCT00242775/17 countries/2309 patients), COMPASS (AstraZeneca study SD-039-0735/16 countries/3335 patients), and COSMOS (AstraZeneca study SD-039-0691/16 countries/2143 patients). Economic analyses, conducted from a healthcare sector perspective (medication costs + healthcare utilization costs), applied unit costs from countries where healthcare costs are publicly available: Indonesia, Thailand and Vietnam. Results are expressed in British pound sterling (GBP/patient/year)., Results: Annual exacerbation rates were low and differences between treatment strategies were small (range, FP/salm: 0.31-0.38, MART: 0.24-0.25) although statistically significant in favor of MART. Total average (minimum-maximum) direct costs (in GBP/patient/year) across the three studies were £187 (£137-£284), £158 (£125-£190), and £151 (£141-£164) for those who used FP/salm, and £242 (£217-£267), £284 (£237-£340) and £266 (£224-£315) for MART in Indonesia, Thailand and Vietnam, respectively. On average, total direct costs/patient/year with FP/salm were 22.8%, 44.6% and 43.0% lower than with MART for Indonesia, Thailand and Vietnam, respectively., Conclusions: In the three countries evaluated, total treatment costs with regular twice-daily FP/salm were consistently lower than with budesonide/formoterol MART due to lower direct healthcare costs.
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- 2022
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22. Estimates of Japanese Encephalitis mortality and morbidity: A systematic review and modeling analysis.
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Cheng Y, Tran Minh N, Tran Minh Q, Khandelwal S, and Clapham HE
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- China, Humans, Morbidity, Philippines epidemiology, Thailand, Encephalitis, Japanese epidemiology, Encephalitis, Japanese prevention & control, Japanese Encephalitis Vaccines
- Abstract
Background: Japanese Encephalitis (JE) is known for its high case fatality ratio (CFR) and long-term neurological sequelae. Over the years, efforts in JE treatment and control might change the JE fatality risk. However, previous estimates were from 10 years ago, using data from cases in the 10 years before this. Estimating JE disease severity is challenging because data come from countries with different JE surveillance systems, diagnostic methods, and study designs. Without precise and timely JE disease severity estimates, there is continued uncertainty about the JE disease burden and the effect of JE vaccination., Methodology: We performed a systematic review to collate age-stratified JE fatality and morbidity data. We used a stepwise model selection with BIC as the selection criteria to identify JE CFR drivers. We used stacked regression, to predict country-specific JE CFR from 1961 to 2030. JE morbidity estimates were grouped from similar study designs to estimate the proportion of JE survivors with long-term neurological sequelae., Principal Findings: We included 82 and 50 peer-reviewed journal articles published as of March 06 2021 for JE fatality and morbidity with 22 articles in both analyses. Results suggested overall JE CFR estimates of 26% (95% CI 22, 30) in 1961-1979, 20% (95% CI 17, 24) in 1980-1999, 14% (95% CI 11, 17) in 2000-2018, and 14% (95% CI 11, 17) in 2019-2030. Holding other variables constant, we found that JE fatality risk decreased over time (OR: 0.965; 95% CI: 0.947-0.983). Younger JE cases had a slightly higher JE fatality risk (OR: 1.012; 95% CI: 1.003-1.021). The odds of JE fatality in countries with JE vaccination is 0.802 (90% CI: 0.653-0.994; 95% CI: 0.62-1.033) times lower than the odds in countries without JE vaccination. Ten percentage increase in the percentage of rural population to the total population was associated with 15.35% (95% CI: 7.71, 22.57) decrease in JE fatality odds. Ten percentage increase in population growth rate is associated with 3.71% (90% CI: 0.23, 7.18; 95% CI: -0.4, 8.15) increase in JE fatality odds. Adjusting for the effect of year, rural population percent, age of JE cases, and population growth rate, we estimated that there was a higher odds of JE fatality in India compared to China. (OR: 5.46, 95% CI: 3.61-8.31). Using the prediction model we found that, in 2000-2018, Brunei, Pakistan, and Timor-Leste were predicted to have the highest JE CFR of 20%. Bangladesh, Guam, Pakistan, Philippines, and Vietnam had projected JE CFR over 20% for after 2018, whereas the projected JE CFRs were below 10% in China, Indonesia, Cambodia, Myanmar, Malaysia, and Thailand. For disability, we estimated that 36% (min-max 0-85) JE patients recovered fully at hospital discharge. One year after hospital discharge, 46% (min-max 0%-97%) JE survivors were estimated to live normally but 49% (min-max 3% - 86%)till had neurological sequelae., Conclusion: JE CFR estimates were lower than 20% after 2000. Our study provides an updated estimation of CFR and proportion of JE cases with long-term neurological sequelae that could help to refine cost-benefit assessment for JE control and elimination programs., Competing Interests: The authors have declared that no competing interests exist.
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- 2022
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23. Marginols A‒H, unprecedented pimarane diterpenoids from Kaempferia marginata and their NO inhibitory activities.
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Do KM, Kodama T, Shin MK, Nu LHT, Nguyen HM, Dang SV, Shiokawa KI, Hayakawa Y, and Morita H
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- Abietanes chemistry, Abietanes pharmacology, Molecular Structure, Rhizome chemistry, Thailand, Diterpenes chemistry, Zingiberaceae chemistry
- Abstract
Kaempferia marginata rhizomes are used as an herb in food and as traditional medicine for the treatment of inflammatory-related diseases in Asian countries. In contrast to the previously reported phytochemical investigation of Thai and Chinese K. marginata rhizomes, which demonstrated the presence of sandaracopimaradiene and ent-sandaracopimaradiene, our first investigation of Vietnamese K. marginata rhizomes led to the isolation of eight undescribed pimarane diterpenoids, marginols A‒H, along with 18 known pimarane diterpenoids. The structures of these compounds were elucidated by spectroscopic techniques, including 1D and 2D NMR, HRESIMS, and CD spectroscopy and/or by comparisons of their NMR data with previously reported data. Furthermore, evaluations of the NO production inhibitory activity against LPS-stimulated RAW264.7 cells revealed that the undescribed compounds, marginols B and D‒G, and the known compounds, sandaracopimaradien-6β,9α-diol-1-one and 6-acetoxysandaracopimardien-9-ol-1-one, showed potent activities. These results provide insights into the chemodiversity of Vietnamese K. marginata rhizomes as well as their traditional usage from the viewpoint of their chemical constituents., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
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- 2022
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24. An integrative taxonomic revision of slug-eating snakes (Squamata: Pareidae: Pareineae) reveals unprecedented diversity in Indochina.
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Poyarkov NA, Nguyen TV, Pawangkhanant P, Yushchenko PV, Brakels P, Nguyen LH, Nguyen HN, Suwannapoom C, Orlov N, and Vogel G
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- Animals, Phylogeny, Indochina, Asia, Southeastern, Thailand, Snakes genetics, Lizards genetics
- Abstract
Slug-eating snakes of the subfamily Pareinae are an insufficiently studied group of snakes specialized in feeding on terrestrial mollusks. Currently Pareinae encompass three genera with 34 species distributed across the Oriental biogeographic region. Despite the recent significant progress in understanding of Pareinae diversity, the subfamily remains taxonomically challenging. Here we present an updated phylogeny of the subfamily with a comprehensive taxon sampling including 30 currently recognized Pareinae species and several previously unknown candidate species and lineages. Phylogenetic analyses of mtDNA and nuDNA data supported the monophyly of the three genera Asthenodipsas , Aplopeltura , and Pareas . Within both Asthenodipsas and Pareas our analyses recovered deep differentiation with each genus being represented by two morphologically diagnosable clades, which we treat as subgenera. We further apply an integrative taxonomic approach, including analyses of molecular and morphological data, along with examination of available type materials, to address the longstanding taxonomic questions of the subgenus Pareas , and reveal the high level of hidden diversity of these snakes in Indochina. We restrict the distribution of P. carinatus to southern Southeast Asia, and recognize two subspecies within it, including one new subspecies proposed for the populations from Thailand and Myanmar. We further revalidate P. berdmorei , synonymize P. menglaensis with P. berdmorei , and recognize three subspecies within this taxon, including the new subspecies erected for the populations from Laos and Vietnam. Furthermore, we describe two new species of Pareas from Vietnam: one belonging to the P. carinatus group from southern Vietnam, and a new member of the P. nuchalis group from the central Vietnam. We provide new data on P. temporalis , and report on a significant range extension for P. nuchalis . Our phylogeny, along with molecular clock and ancestral area analyses, reveal a complex diversification pattern of Pareinae involving a high degree of sympatry of widespread and endemic species. Our analyses support the "upstream" colonization hypothesis and, thus, the Pareinae appears to have originated in Sundaland during the middle Eocene and then colonized mainland Asia in early Oligocene. Sundaland and Eastern Indochina appear to have played the key roles as the centers of Pareinae diversification. Our results reveal that both vicariance and dispersal are responsible for current distribution patterns of Pareinae, with tectonic movements, orogeny and paleoclimatic shifts being the probable drivers of diversification. Our study brings the total number of Pareidae species to 41 and further highlights the importance of comprehensive taxonomic revisions not only for the better understanding of biodiversity and its evolution, but also for the elaboration of adequate conservation actions., Competing Interests: Nikolay A. Poyarkov serves as an Academic Editor for PeerJ. The other authors declare that they have no competing interests., (© 2022 Poyarkov et al.)
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- 2022
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25. Antimicrobial stewardship capacity and manpower needs in the Asia Pacific.
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Lee TH, Lye DC, Chung DR, Thamlikitkul V, Lu M, Wong AT, Hsueh PR, Wang H, Cooper C, Wong JG, Shimono N, Pham VH, Perera J, Yang YH, Shibl AM, Kim SH, Hsu LY, and Song JH
- Subjects
- Adult, Australia, China, Humans, Singapore, Taiwan, Thailand, Vietnam, Workforce, Antimicrobial Stewardship
- Abstract
Objectives: Antimicrobial stewardship is a strategy to combat antimicrobial resistance in hospitals. Given the burden and impact of antimicrobial resistance in the Asia Pacific, it is important to document capacity and gaps in antimicrobial stewardship programmes (ASP). We aimed to understand existing capacities and practices, and define the resources needed to establish antimicrobial stewardship where it is lacking., Methods: An anonymous online survey, consisting of questions on antimicrobial control at country, hospital and programme levels, was circulated to healthcare providers in the field of infectious diseases and microbiology through Asian Network for Surveillance of Resistant Pathogens, ReAct Group and the Australasian Society for infectious Diseases., Results: 139 participants from 16 countries or regions completed the survey. The majority of participants were adult infectious diseases physicians (61/139, 43.9%) and microbiologists (31/139, 22.3%). Participants from 7 countries reported that antimicrobials can be obtained without prescriptions. Despite the high percentage (75.5%) of respondents working in large hospitals, only 22/139 participants (15.8%) from Australia, China, Singapore, Taiwan, Thailand and Vietnam reported having more than 10 infectious diseases physicians. Hospital empiric antimicrobial guidelines for common infections were available according to 110/139 (79.1%) participants. Pre-authorisation of antimicrobials was reported by 88/113 (77.9%) respondents while prospective audit and feedback was reported by 93/114 (81.6%). Automatic stop orders and culture-guided de-escalation were reported by only 52/113 (46.0%) and 27/112 (24.1%) respectively., Conclusion: The survey reveals a wide range of ASP development in Asia Pacific. Establishing national workgroups and guidelines will help advance antimicrobial stewardship in this diverse region., (Copyright © 2021 International Society for Antimicrobial Chemotherapy. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2021
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26. Increased Burden of Concordant and Sequential Anogenital Human Papillomavirus Infections Among Asian Young Adult Women With Perinatally Acquired HIV Compared With HIV-Negative Peers.
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Sohn AH, Chalermchockcharoenkit A, Teeraananchai S, Hansudewechakul R, Gatechompol S, Chokephaibulkit K, Dang HLD, Tran DNH, Achalapong J, Teeratakulpisarn N, Thamkhantho M, Phanuphak N, Ananworanich J, Reiss P, and Kerr SJ
- Subjects
- Adolescent, Adult, Child, Early Detection of Cancer, Female, Humans, Papillomaviridae genetics, Prevalence, Risk Factors, Thailand epidemiology, Young Adult, HIV Infections epidemiology, Papillomavirus Infections epidemiology, Uterine Cervical Neoplasms epidemiology
- Abstract
Background: Youth with perinatally acquired HIV (YPHIV) are at higher risk for anogenital human papillomavirus (HPV) infection., Methods: We enrolled a cohort of YPHIV and HIV-negative youth in Thailand and Vietnam, matched by age and lifetime sex partners, and followed them up for 144 weeks (to 2017). Participants had annual pelvic examinations with samples taken for HPV genotyping. Concordant infection was simultaneous HPV detection in multiple anogenital compartments (cervical, vaginal, anal); sequential infection was when the same type was found in successive compartments (cervicovaginal to/from anal). Generalized estimating equations were used to assess factors associated with concordant infection, and Cox regression was used to assess factors associated with sequential infection., Results: A total of 93 YPHIV and 99 HIV-negative women were enrolled, with a median age of 19 years (interquartile range, 18-20 years). High-risk anogenital HPV infection was ever detected in 76 (82%) YPHIV and 66 (67%) HIV-negative youth during follow-up. Concordant anogenital high-risk HPV infection was found in 62 (66%) YPHIV versus 44 (34%) HIV-negative youth. Sequential cervicovaginal to anal high-risk HPV infection occurred in 20 YPHIV versus 5 HIV-negative youth, with an incidence rate of 9.76 (6.30-15.13) versus 2.24 (0.93-5.38) per 100 person-years. Anal to cervicovaginal infection occurred in 4 YPHIV versus 0 HIV-negative women, with an incidence rate of 1.78 (0.67-4.75) per 100 person-years. Perinatally acquired HIV was the one factor independently associated with both concordant and sequential high-risk HPV infection., Conclusions: Children and adolescents with perinatally acquired HIV should be prioritized for HPV vaccination, and cervical cancer screening should be part of routine HIV care for sexually active YPHIV., Competing Interests: Conflict of Interest and Sources of Funding: A.H.S. has received grant and travel support to her institution from ViiV Healthcare. J.A. has received honoraria for participating in advisory meetings for Gilead, ViiV Healthcare, Merck, Roche, and Abbvie. P.R.'s institution, outside of the scope of the current study, has received independent scientific grant support from Gilead, Janssen, Merck, and ViiV, and P.R. has served on scientific advisory boards for Gilead, ViiV, Merck, and Teva, for which honoraria were all paid to his institution., (Copyright © 2020 American Sexually Transmitted Diseases Association. All rights reserved.)
- Published
- 2021
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27. Air quality development during the COVID-19 pandemic over a medium-sized urban area in Thailand.
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Stratoulias D and Nuthammachot N
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- Betacoronavirus, COVID-19, Cities, Environmental Monitoring, Humans, Particulate Matter analysis, SARS-CoV-2, Thailand epidemiology, Air Pollutants analysis, Air Pollution analysis, Coronavirus Infections, Pandemics, Pneumonia, Viral
- Abstract
The COVID-19 pandemic has triggered an industrial and financial slowdown due to unprecedented regulations imposed with the purpose to contain the spread of the virus. Consequently, the positive effect on the environment has been witnessed. One of the most prominent evidences has been the drastic air quality improvement, as a direct consequence of lower emissions from reduced industrial activity. While several studies have demonstrated the validity of this hypothesis in mega-cities worldwide, it is still an unsubstantiated fact whether the same holds true for cities with a smaller urban extent and population. In the present study we investigate the temporal development of atmospheric constituent concentrations as retrieved concurrently from the Sentinel-5P satellite and a ground meteorological station. We focus on the period before and during the COVID-19 pandemic over the city of Hat Yai, Thailand and present the effect of the lockdown on the atmospheric quality over this average populated city (156,000 inhabitants). NO
2 , PM2.5 and PM10 concentrations decreased by 33.7%, 21.8% and 22.9% respectively in the first 3 weeks of the lockdown compared to the respective pre-lockdown period; O3 also decreased by 12.5% and contrary to similar studies. Monthly averages of NO2 , CO and PM2.5 for the month April exhibit in 2020 the lowest values in the last decade. Sentinel-5P retrieved NO2 tropospheric concentrations, both locally over the ground station and the spatial average over the urban extent of the city, are in agreement with the reduction observed from the ground station. Numerous studies have already presented evidence of the bettering of the air quality over large metropolitan areas during the COVID-19 pandemic. In the current study we demonstrate that this holds true for Hat Yai, Thailand; we propound that the environmental benefits documented in major urban agglomerations during the lockdown may extend to medium-sized urban areas as well., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020. Published by Elsevier B.V.)- Published
- 2020
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28. Incidence and Persistence of High-risk Anogenital Human Papillomavirus Infection Among Female Youth With and Without Perinatally Acquired Human Immunodefiency Virus Infection: A 3-year Observational Cohort Study.
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Phanuphak N, Teeraananchai S, Hansudewechakul R, Gatechompol S, Chokephaibulkit K, Dang HLD, Tran DNH, Achalapong J, Teeratakulpisarn N, Chalermchockcharoenkit A, Thamkhantho M, Pankam T, Singtoroj T, Termrungruanglert W, Chaithongwongwatthana S, Kerr SJ, and Sohn AH
- Subjects
- Adolescent, Adult, Child, Cohort Studies, Female, Humans, Incidence, Papillomaviridae genetics, Prevalence, Risk Factors, Thailand, Young Adult, HIV Infections complications, HIV Infections epidemiology, Papillomavirus Infections complications, Papillomavirus Infections epidemiology
- Abstract
Background: Female youth with perinatally acquired human immunodeficiency virus (PHIV) may be at higher risk than uninfected youth for persistent anogenital human papillomavirus (HPV) infection, due to prolonged immunodeficiency., Methods: A 3-year cohort study was conducted between 2013 and 2017 among Thai and Vietnamese PHIV and HIV-uninfected females 12-24 years, matched by age group and number of lifetime sexual partners. For HPV genotyping, cervical and anal samples were obtained at baseline and annually. Vaginal samples were collected at baseline and every 6 months. Factors associated with high-risk HPV (HR-HPV) persistence and incidence were assessed., Results: We enrolled 93 PHIV and 99 HIV-uninfected females. Median age was 19 (interquartile range [IQR] 18-20) years. For the 7 HR-HPV types (16, 18, 31, 33, 45, 52, 58) in the nonavalent HPV vaccine, PHIV had significantly higher incidence (P = .03) and persistence (P = .01) than HIV-uninfected youth over a 3-year period. Having HIV (adjusted hazard ratio [aHR] 2.1, 95% confidence interval [CI] 1.1-3.9) and ever using illegal substances (aHR 4.8, 95% CI 1.8-13.0) were associated with incident 7 HR-HPV infections. HIV-positive status (adjusted prevalence ratio [aPR] 2.2, 95% CI 1.5-3.2), recent alcohol use (aPR 1.75, 95% CI 1.2-2.5), and higher number of lifetime partners (aPR 2.0, 95% CI 1.4-3.1, for 3-5 partners; aPR 1.93, 95% CI 1.2-3.2, for ≥6 partners) were significantly associated with persistent 7 HR-HPV infections., Conclusions: Female PHIV were at higher risk of having anogenital HR-HPV acquisition and persistence. Primary and secondary prevention programs for HPV infection and HPV-related diseases should be prioritized for PHIV children and youth., (© The Author(s) 2019. Published by Oxford University Press for the Infectious Diseases Society of America. All rights reserved. For permissions, e-mail: journals.permissions@oup.com.)
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- 2020
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29. Priorities for primary health care policy implementation: recommendations from the combined experience of six countries in the Asia-Pacific.
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Kassai R, van Weel C, Flegg K, Tong SF, Han TM, Noknoy S, Dashtseren M, Le An P, Ng CJ, Khoo EM, Noh KM, Lee MC, Howe A, and Goodyear-Smith F
- Subjects
- Adult, Australia, Female, Humans, Malaysia, Male, Mongolia, Myanmar, Thailand, Vietnam, Health Policy, Primary Health Care methods
- Abstract
Primary health care is essential for equitable, cost-effective and sustainable health care. It is the cornerstone to achieving universal health coverage against a backdrop of rising health expenditure and aging populations. Implementing strong primary health care requires grassroots understanding of health system performance. Comparing successes and barriers between countries may help identify mutual challenges and possible solutions. This paper compares and analyses primary health care policy in Australia, Malaysia, Mongolia, Myanmar, Thailand and Vietnam. Data were collected at the World Organization of National Colleges, Academies and Academic Associations of General Practitioners/Family Physicians (WONCA) Asia-Pacific regional conference in November 2017 using a predetermined framework. The six countries varied in maturity of their primary health care systems, including the extent to which family doctors contribute to care delivery. Challenges included an insufficient trained and competent workforce, particularly in rural and remote communities, and deficits in coordination within primary health care, as well as between primary and secondary care. Asia-Pacific regional policy needs to: (1) focus on better collaboration between public and private sectors; (2) take a structured approach to information sharing by bridging gaps in technology, health literacy and interprofessional working; (3) build systems that can evaluate and improve quality of care; and (4) promote community-based, high-quality training programs.
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- 2020
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30. Determining standardized causes of death of infants, children, and adolescents living with HIV in Asia.
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Sohn AH, Lumbiganon P, Kurniati N, Lapphra K, Law M, Do VC, Van Nguyen L, Truong KH, Wati DK, Ounchanum P, Puthanakit T, Sudjaritruk T, Ly PS, Yusoff NKN, Fong SM, Mohamed TJ, Nallusamy R, Kumarasamy N, and Kariminia A
- Subjects
- Adolescent, Anti-HIV Agents therapeutic use, CD4 Lymphocyte Count, Cambodia, Child, Child, Preschool, Female, Humans, India, Indonesia, Infant, Malaysia, Male, Retrospective Studies, Thailand, Viral Load, Young Adult, Cause of Death, HIV Infections drug therapy
- Abstract
Objective: To implement a standardized cause of death reporting and review process to systematically disaggregate causes of HIV-related deaths in a cohort of Asian children and adolescents., Design: Death-related data were retrospectively and prospectively assessed in a longitudinal regional cohort study., Methods: Children under routine HIV care at sites in Cambodia, India, Indonesia, Malaysia, Thailand, and Vietnam between 2008 and 2017 were followed. Causes of death were reported and then independently and centrally reviewed. Predictors were compared using competing risks survival regression analyses., Results: Among 5918 children, 5523 (93%; 52% male) had ever been on combination antiretroviral therapy. Of 371 (6.3%) deaths, 312 (84%) occurred in those with a history of combination antiretroviral therapy (crude all-cause mortality 9.6 per 1000 person-years; total follow-up time 32 361 person-years). In this group, median age at death was 7.0 (2.9-13) years; median CD4 cell count was 73 (16-325) cells/μl. The most common underlying causes of death were pneumonia due to unspecified pathogens (17%), tuberculosis (16%), sepsis (8.0%), and AIDS (6.7%); 12% of causes were unknown. These clinical diagnoses were further grouped into AIDS-related infections (22%) and noninfections (5.8%), and non-AIDS-related infections (47%) and noninfections (11%); with 12% unknown, 2.2% not reviewed. Higher CD4 cell count and better weight-for-age z-score were protective against death., Conclusion: Our standardized cause of death assessment provides robust data to inform regional resource allocation for pediatric diagnostic evaluations and prioritization of clinical interventions, and highlight the continued importance of opportunistic and nonopportunistic infections as causes of death in our cohort.
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- 2020
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31. Suicide Attempt and Associated Factors Among Adolescents in Five Southeast Asian Countries in 2015.
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Pengpid S and Peltzer K
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- Adolescent, Amphetamine-Related Disorders epidemiology, Anxiety epidemiology, Child, Crime Victims statistics & numerical data, Female, Humans, Indonesia epidemiology, Laos epidemiology, Male, Marijuana Use epidemiology, Parents, Peer Group, Philippines epidemiology, Risk Factors, Thailand epidemiology, Timor-Leste epidemiology, Underage Drinking statistics & numerical data, Violence statistics & numerical data, Bullying statistics & numerical data, Loneliness, Social Support, Suicidal Ideation, Suicide, Attempted statistics & numerical data
- Abstract
Background: Suicide is a major cause of death among adolescents. Aims: The study aimed to report on the prevalence and correlates of suicide attempt among in-school adolescents in five Southeast Asian countries. Method: = 1.6) that were representative of all students in secondary school in Indonesia, Laos, Philippines, Thailand, and Timor-Leste. SD The overall prevalence of past 12-month suicide attempt was 9.0%, ranging from 3.9% in Indonesia to 16.2% in the Philippines. Among those with a suicide attempt in the past 12 months, almost half (49.0%) had suicidal ideation and 47.7% had a suicide plan in the past 12 months. In adjusted Poisson regression analysis, female gender, residing in Laos, Philippines, Thailand, and Timor-Leste, no close friends, loneliness, anxiety, bullying victimization, physical attack, lack of parental support, lack of peer support, current alcohol use, lifetime cannabis use, lifetime amphetamine use, soft drink consumption, truancy, and injury were associated with suicide attempt. Results: The overall prevalence of past 12-month suicide attempt was 9.0%, ranging from 3.9% in Indonesia to 16.2% in the Philippines. Among those with a suicide attempt in the past 12 months, almost half (49.0%) had suicidal ideation and 47.7% had a suicide plan in the past 12 months. In adjusted Poisson regression analysis, female gender, residing in Laos, Philippines, Thailand, and Timor-Leste, no close friends, loneliness, anxiety, bullying victimization, physical attack, lack of parental support, lack of peer support, current alcohol use, lifetime cannabis use, lifetime amphetamine use, soft drink consumption, truancy, and injury were associated with suicide attempt. Limitations: The correlational nature of the study limits the implications of the findings. Conclusion: Almost one in 10 students had attempted suicide in the past 12 months and several factors associated with suicide attempt were identified among adolescents in five Southeast Asian countries.
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- 2020
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32. Prevalence of High-risk Nonavalent Vaccine-type Human Papillomavirus Infection Among Unvaccinated, Sexually Active Asian Female Adolescents With and Without Perinatally Acquired HIV Infection.
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Sricharoenchai S, Kerr SJ, Gatechompol S, Hansudewechakul R, Dang HLD, Tran DNH, Teeratakulpisarn N, Chalermchockcharoenkit A, Achalapong J, Teeraananchai S, Singtoroj T, Phanuphak N, Sohn AH, and Chokephaibulkit K
- Subjects
- Adolescent, Antibodies, Viral blood, Cohort Studies, Female, HIV Infections virology, Humans, Papillomaviridae classification, Papillomaviridae isolation & purification, Papillomavirus Vaccines administration & dosage, Prevalence, Sexually Transmitted Diseases blood, Sexually Transmitted Diseases epidemiology, Sexually Transmitted Diseases virology, Thailand epidemiology, Vietnam epidemiology, Young Adult, HIV Infections epidemiology, Infectious Disease Transmission, Vertical, Papillomaviridae genetics, Papillomavirus Infections epidemiology, Sexual Behavior statistics & numerical data
- Abstract
Background: We studied the prevalence of 7, high-risk human papillomavirus (HPV) types in the nonavalent vaccine (HRVT-7: HPV 16, 18, 31, 33, 45, 52, 58) among vaccine-naïve, sexually active Asian female adolescents with and without perinatally acquired HIV infection (PHIV)., Methods: PHIV female adolescents 12-24 years of age and HIV-uninfected controls matched by age and number of lifetime sex partners were enrolled in a 3-year observational cohort study in Thailand and Vietnam. Samples from the oral cavity, anus, cervix and vagina were collected for HRVT-7 HPV genotyping, and serum collected for HPV 16 and 18 antibody testing. Baseline data were analyzed using multivariable logistic regression., Results: We included 93 PHIV (median CD4 593 cells/mm, 62% with HIV RNA suppression) and 99 HIV-uninfected adolescents (median lifetime sex partners 2). The overall prevalence of HRVT-7 infection was 53% in PHIV and 49% in HIV-uninfected adolescents (P = 0.66). Cervical HRVT-7 DNA was detected more frequently in PHIV than HIV-uninfected adolescents (37% vs. 23%, P = 0.04). Overall, more lifetime partners [≥3 vs. 1; odds ratio (OR) 2.99 (1.38-6.51), P = 0.02] and having other sexually transmitted infections [OR 3.30 (1.51-7.21), P = 0.003] increased the risk of HRVT-7 infection and/or positive HPV 16/18 antibodies; while detectable HIV RNA [OR 2.78 (1.05-7.36), P = 0.04] increased the risk among PHIV adolescents., Conclusions: Half of sexually active Asian female adolescents, regardless of HIV infection, had already acquired HRVT-7 infection. This underscores the need for earlier access to HPV vaccine in the region.
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- 2020
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33. The Status of First Aid and Its Associations with Health Outcomes among Patients with Traffic Accidents in Urban Areas of Vietnam.
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Mai HT, Vu HM, Ngo TT, Vu GT, Nguyen HLT, Hoang MT, Tran BX, Latkin CA, Ho CSH, and Ho RCM
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- Cross-Sectional Studies, Humans, Outcome Assessment, Health Care, Thailand, Vietnam epidemiology, Accidents, Traffic, First Aid
- Abstract
While it is well-evident that proper first aid would significantly promote survival and later treatment outcomes, little attention has been paid to improving its capacity in Vietnam. Thus, we conducted this study to assess the status of first aid and its associations with health outcomes among patients in traffic accidents in urban areas of Vietnam. We conducted a cross-sectional study on 413 patients in traffic accidents from October to December 2018 at six hospitals in Thai Binh province. Socio-demographics, first aid characteristics, and health outcomes were collected via face-to-face interviews using a structured questionnaire. We used a chi-square test to determine the differences in health outcomes among those who received first aid and those without. In addition, a multivariable regression was performed to determine the factors associated with first aid. The results indicated that less than half of the patients received first aid (48.1%), and only one fourth received first aid within 10 min after an accident. The proportions of having problems with mobility, self-care, usual activities, and pain/discomfort were significantly lower among those who received first aid compared to those without it. The regression model showed that those with multiple injuries were less likely to receive first aid.
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- 2020
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34. The Prevalence of Alcohol and Tobacco Use Associated Risk Factor of Noncommunicable Diseases in Si Sa Ket Province, Thailand.
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Khemthong K, Turnbull N, Suwanlee SR, and Peltzer K
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- Adolescent, Adult, Alcohol Drinking, Cross-Sectional Studies, Female, Humans, Hypertension, Male, Middle Aged, Prevalence, Risk Factors, Thailand, Noncommunicable Diseases, Tobacco Use adverse effects
- Abstract
Noncommunicable diseases (NCDs) were caused by risk factors also rising rapidly and killed more people. This study aimed to explore and determine the prevalence and distribution of alcohol and tobacco use as NCDs's risk factors. We used a cross-sectional survey on Health dataset between October 2013 and April 2017 of people who were 13 years old and older. This study was investigated included demographics, alcohol consumption and tobacco use. This study found risk of NCDs 49.07%, The majority of risk factor were men (50.2 %), age_group were 40-59 years old(24.4%), The most were men having diabetes mellitus family (43.0%), hypertension family (17.9 %), alcohol consumption (26.9%), tobacco use (19.0%), most of the women were high blood pressure (23.0%), high blood sugar level (33.3%), overweight and obesity (23.4%), waist was over (22.5%) and high total cholesterol (21.4%), alcohol consumption among the gender 37.8%, most were male (26.9%), age_group mostly 45-59 years old (19.3 %), married (23.1%), agricultural (29.7%), primary school (29.7%). The prevalence of risk factors, most risk factors was tobacco use in men (18.9%), OR 16.789, (95%CI, p-value001), alcohol consumption were men (26.9%), OR 3.934 (95%CI, p-value<.001).
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- 2020
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35. Psychological Distress of Patients Experiencing Different Types of Road Traffic Injuries in Vietnam.
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Hoang CL, Vu HM, Pham HQ, Nguyen HLT, Vu LG, Tran BX, Latkin CA, Ho RCM, and Ho CSH
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- Accidents, Traffic, Automobile Driving, Female, Humans, Male, Thailand, Vietnam, Psychological Distress, Wounds and Injuries
- Abstract
Road-related injuries are often catastrophic, and the eighth leading cause of all-aged mortality. While psychological problems, including anxiety, driving phobia, and post-traumatic stress have been found to be common among injured survivors, the literature in this area is still limited. This study aimed to evaluate the prevalence of distress between different types of road injuries among 413 patients in Thai Binh hospitals from October to December 2018. The Kessler Psychological Distress Scale (K6) was used to assess mental health status. Sociodemographic and clinical characteristics were also collected. The results of Multiple Logistic and Tobit regression models were utilized. Psychological issues were found in 13.8% of the participants. In terms of K6 profile, nervous, restless/fidgety, and "everything was an effort" were the three most frequently endorsed aspects. Having soft-tissue injuries had a 0.32-time lower likelihood of psychological distress compared to those having other injuries. Additionally, patients who were diagnosed with fractures were 4.5-times more likely to report psychological distress. Our finding highlights the need for psychological screening to reduce disabilities associated with non-fatal injury related to road traffic crashes., Competing Interests: The authors declare no conflict of interest.
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- 2020
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36. Detecting geospatial patterns of Plasmodium falciparum parasite migration in Cambodia using optimized estimated effective migration surfaces.
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Li Y, Shetty AC, Lon C, Spring M, Saunders DL, Fukuda MM, Hien TT, Pukrittayakamee S, Fairhurst RM, Dondorp AM, Plowe CV, O'Connor TD, Takala-Harrison S, and Stewart K
- Subjects
- Animals, Cambodia epidemiology, Cluster Analysis, Geographic Information Systems, Humans, Thailand epidemiology, Malaria, Falciparum epidemiology, Plasmodium falciparum, Spatial Analysis
- Abstract
Background: Understanding the genetic structure of natural populations provides insight into the demographic and adaptive processes that have affected those populations. Such information, particularly when integrated with geospatial data, can have translational applications for a variety of fields, including public health. Estimated effective migration surfaces (EEMS) is an approach that allows visualization of the spatial patterns in genomic data to understand population structure and migration. In this study, we developed a workflow to optimize the resolution of spatial grids used to generate EEMS migration maps and applied this optimized workflow to estimate migration of Plasmodium falciparum in Cambodia and bordering regions of Thailand and Vietnam., Methods: The optimal density of EEMS grids was determined based on a new workflow created using density clustering to define genomic clusters and the spatial distance between genomic clusters. Topological skeletons were used to capture the spatial distribution for each genomic cluster and to determine the EEMS grid density; i.e., both genomic and spatial clustering were used to guide the optimization of EEMS grids. Model accuracy for migration estimates using the optimized workflow was tested and compared to grid resolutions selected without the optimized workflow. As a test case, the optimized workflow was applied to genomic data generated from P. falciparum sampled in Cambodia and bordering regions, and migration maps were compared to estimates of malaria endemicity, as well as geographic properties of the study area, as a means of validating observed migration patterns., Results: Optimized grids displayed both high model accuracy and reduced computing time compared to grid densities selected in an unguided manner. In addition, EEMS migration maps generated for P. falciparum using the optimized grid corresponded to estimates of malaria endemicity and geographic properties of the study region that might be expected to impact malaria parasite migration, supporting the validity of the observed migration patterns., Conclusions: Optimized grids reduce spatial uncertainty in the EEMS contours that can result from user-defined parameters, such as the resolution of the spatial grid used in the model. This workflow will be useful to a broad range of EEMS users as it can be applied to analyses involving other organisms of interest and geographic areas.
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- 2020
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37. Influence of rice straw open burning on levels and profiles of semi-volatile organic compounds in ambient air.
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Tipayarom A and Kim Oanh NT
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- Air Pollution, Environmental Monitoring, Fluorenes, Hydrocarbons, Chlorinated analysis, Pesticides analysis, Polycyclic Aromatic Hydrocarbons analysis, Seasons, Smoke, Soil, Thailand, Agriculture methods, Air Pollutants analysis, Oryza, Plant Stems, Volatile Organic Compounds analysis
- Abstract
Semi-volatile organic compounds (SVOCs) of polycyclic aromatic hydrocarbons (PAHs) and organo-chlorinated pesticides (OCPs) were sampled (24 h, Hi-Vol XAD-2) in dry and wet season, and separately analyzed for particulate and gaseous phases. To reveal the influence of rice straw open burning (RSOB), SVOC levels and profiles were comparatively analyzed between two areas, rice plantation area (KL) with intensive RSOB activities and remote national park (KY), and with fresh RSOB smoke. PAHs were significantly higher in KL than KY in both seasons. PAHs levels in KL during burning season were ∼10 times above the wet season indicating RSOB influence. In KY, however, PAHs levels in wet season were 2 times above dry season suggesting impacts of local emission transport. OCPs levels were not statistically different between 2 seasons and between 2 sites in each season. RSOB smoke contained 5880 ng/m
3 of 14 PAHs and 13.5 ng/m3 of 16 OCPs which were respectively 14 and 7 times above those in KL during burning period. The 4-ring compounds, most remarkably fluoranthene, and 5-ring (BbF and BaP) were dominant PAHs species in RSOB smoke. Similarity in PAH profiles and diagnostic ratios between KL dry season and RSOB smoke suggested its strong influence on the local air quality. Elevated OCPs levels in RSOB smoke may be associated with re-emission of the compounds accumulated in the paddy soil during the burning. RSOB in Southeast Asia has a serious implication on exposure to the toxic air pollutants hence should be eliminated with priority., (Copyright © 2019 Elsevier Ltd. All rights reserved.)- Published
- 2020
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38. Complete Range of the Universal mtDNA Gene Pool and High Genetic Diversity in the Thai Dog Population.
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Zhang L, Liu Y, Thai Ke Q, Ardalan A, Boonyaprakob U, and Savolainen P
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- Animals, Asia, Southeastern, Dogs, Europe, Gene Pool, Haplotypes genetics, Humans, Laos, Male, Myanmar, Phylogeny, Thailand, DNA, Mitochondrial genetics, Genetic Variation genetics, Genetics, Population
- Abstract
The dog population of Southern East Asia is unique in harboring virtually the full range of the universal mtDNA gene pool, and consequently, it has the highest genetic diversity worldwide. Despite this, limited research has been performed on dog genetics within this region. Here we present the first comprehensive study of a sub-region within Southern East Asia, analyzing 528bp of mtDNA for 265 dogs from Thailand, in the context of dogs from across the Old World. We found that Thailand was the only region in the world that has the full range of the universal mtDNA gene pool, that is, all 10 sub-haplogroups. Consequently, the statistics for diversity are among the highest, especially in North Thailand, which had high values for haplotype diversity and the number of haplotypes, and the lowest proportion of individuals with a universal type-derived haplotype (UTd) among all regions. As previously observed, genetic diversity is distinctly lower outside Southern East Asia and it decreases following a cline to the lowest values in western Eurasia. Thus, the limited geographical region of Thailand harbors a distinctly higher genetic diversity than much larger regions in western Eurasia, for example, Southwest Asia and Europe which have only five and four of the 10 sub-haplogroups, respectively. Within Thailand, diversity statistics for all four sub-regions follow the general pattern of Southern East Asia, but North Thailand stands out with its high diversity compared to the other regions. These results show that a small part of Southern East Asia harbors the full range of the mtDNA gene pool, and they emphasize the exceptional genetic status of Southern East Asia. This indicates that today's dogs can trace a major part of their ancestry to Southern East Asia or closely situated regions, highlighting Thailand as a region of special interest. Considering the large genetic diversity found in Thailand and that many neighboring regions, e.g., Myanmar and Laos, have not been studied for dog genetics, it is possible that large parts of the dog gene pool remain undiscovered. It will be an important task for future studies to fill in these blanks on the phylogeographic map.
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- 2020
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39. Underweight and overweight or obesity and associated factors among school-going adolescents in five ASEAN countries, 2015.
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Pengpid S and Peltzer K
- Subjects
- Adolescent, Cross-Sectional Studies, Female, Humans, Indonesia epidemiology, Laos epidemiology, Logistic Models, Male, Philippines epidemiology, Prevalence, Thailand epidemiology, Timor-Leste epidemiology, Obesity epidemiology, Overweight epidemiology, Thinness epidemiology
- Abstract
Purpose: The study examined the prevalence of underweight and overweight or obesity and its correlates among in-school adolescents in five ASEAN countries (Indonesia, Laos, Philippines, Thailand and Timor-Leste) in 2015., Methods: Cross-sectional data were analysed from 30145 school-going adolescents (median age 14 years, interquartile range = 2) from Indonesia, Laos, Philippines, Thailand and Timor-Leste that took part in the "Global School-Based Student Health Survey (GSHS)" in 2015. Body weight was examined by self-reported weight and height and the "international child body mass index standards". Associations with underweight and overweight or obesity were assessed using multinomial logistic regression analyses., Results: The prevalence of underweight was 8.7% and overweight or obesity 14.0%. In adjusted multinomial logistic regression analysis, students residing in Timor-Leste, older age, male sex, bullying victimization and parental supervision were positively associated with underweight, while residing in Laos, current alcohol use and peer support were negatively associated with underweight. Coming from the Philippines and Timor-Leste, older age, experiencing hunger, current alcohol use, and in a physical fight decreased the odds for overweight or obesity, while male sex, fruit consumption, sedentary behaviour, physically attacked and parental bonding increased the odds for overweight or obesity., Conclusion: High prevalences of underweight and overweight/obesity were identified in ASEAN countries and several correlates were identified which can help to tailor interventions., (Copyright © 2019 Diabetes India. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2019
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40. Determinants of dihydroartemisinin-piperaquine treatment failure in Plasmodium falciparum malaria in Cambodia, Thailand, and Vietnam: a prospective clinical, pharmacological, and genetic study.
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van der Pluijm RW, Imwong M, Chau NH, Hoa NT, Thuy-Nhien NT, Thanh NV, Jittamala P, Hanboonkunupakarn B, Chutasmit K, Saelow C, Runjarern R, Kaewmok W, Tripura R, Peto TJ, Yok S, Suon S, Sreng S, Mao S, Oun S, Yen S, Amaratunga C, Lek D, Huy R, Dhorda M, Chotivanich K, Ashley EA, Mukaka M, Waithira N, Cheah PY, Maude RJ, Amato R, Pearson RD, Gonçalves S, Jacob CG, Hamilton WL, Fairhurst RM, Tarning J, Winterberg M, Kwiatkowski DP, Pukrittayakamee S, Hien TT, Day NP, Miotto O, White NJ, and Dondorp AM
- Subjects
- Adolescent, Adult, Cambodia, Drug Therapy, Combination, Female, High-Throughput Nucleotide Sequencing, Humans, Male, Mefloquine therapeutic use, Membrane Transport Proteins genetics, Middle Aged, Mutation, Plasmodium falciparum drug effects, Prospective Studies, Protozoan Proteins genetics, Thailand, Treatment Failure, Vietnam, Young Adult, Antimalarials therapeutic use, Artemisinins therapeutic use, Drug Resistance, Multiple genetics, Malaria, Falciparum drug therapy, Plasmodium falciparum genetics, Quinolines therapeutic use
- Abstract
Background: The emergence and spread of resistance in Plasmodium falciparum malaria to artemisinin combination therapies in the Greater Mekong subregion poses a major threat to malaria control and elimination. The current study is part of a multi-country, open-label, randomised clinical trial (TRACII, 2015-18) evaluating the efficacy, safety, and tolerability of triple artemisinin combination therapies. A very high rate of treatment failure after treatment with dihydroartemisinin-piperaquine was observed in Thailand, Cambodia, and Vietnam. The immediate public health importance of our findings prompted us to report the efficacy data on dihydroartemisinin-piperaquine and its determinants ahead of the results of the overall trial, which will be published later this year., Methods: Patients aged between 2 and 65 years presenting with uncomplicated P falciparum or mixed species malaria at seven sites in Thailand, Cambodia, and Vietnam were randomly assigned to receive dihydroartemisinin-piperaquine with or without mefloquine, as part of the TRACII trial. The primary outcome was the PCR-corrected efficacy at day 42. Next-generation sequencing was used to assess the prevalence of molecular markers associated with artemisinin resistance (kelch13 mutations, in particular Cys580Tyr) and piperaquine resistance (plasmepsin-2 and plasmepsin-3 amplifications and crt mutations). This study is registered with ClinicalTrials.gov, number NCT02453308., Findings: Between Sept 28, 2015, and Jan 18, 2018, 539 patients with acute P falciparum malaria were screened for eligibility, 292 were enrolled, and 140 received dihydroartemisinin-piperaquine. The overall Kaplan-Meier estimate of PCR-corrected efficacy of dihydroartemisinin-piperaquine at day 42 was 50·0% (95% CI 41·1-58·3). PCR-corrected efficacies for individual sites were 12·7% (2·2-33·0) in northeastern Thailand, 38·2% (15·9-60·5) in western Cambodia, 73·4% (57·0-84·3) in Ratanakiri (northeastern Cambodia), and 47·1% (33·5-59·6) in Binh Phuoc (southwestern Vietnam). Treatment failure was associated independently with plasmepsin2/3 amplification status and four mutations in the crt gene (Thr93Ser, His97Tyr, Phe145Ile, and Ile218Phe). Compared with the results of our previous TRACI trial in 2011-13, the prevalence of molecular markers of artemisinin resistance (kelch13 Cys580Tyr mutations) and piperaquine resistance (plasmepsin2/3 amplifications and crt mutations) has increased substantially in the Greater Mekong subregion in the past decade., Interpretation: Dihydroartemisinin-piperaquine is not treating malaria effectively across the eastern Greater Mekong subregion. A highly drug-resistant P falciparum co-lineage is evolving, acquiring new resistance mechanisms, and spreading. Accelerated elimination of P falciparum malaria in this region is needed urgently, to prevent further spread and avoid a potential global health emergency., Funding: UK Department for International Development, Wellcome Trust, Bill & Melinda Gates Foundation, Medical Research Council, and National Institutes of Health., (Copyright © 2019 The Author(s). Published by Elsevier Ltd. This is an Open Access article under the CC BY-NC-ND 4·0 license. Published by Elsevier Ltd.. All rights reserved.)
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- 2019
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41. Antibiotic knowledge, attitudes and practices: new insights from cross-sectional rural health behaviour surveys in low-income and middle-income South-East Asia.
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Haenssgen MJ, Charoenboon N, Zanello G, Mayxay M, Reed-Tsochas F, Lubell Y, Wertheim H, Lienert J, Xayavong T, Khine Zaw Y, Thepkhamkong A, Sithongdeng N, Khamsoukthavong N, Phanthavong C, Boualaiseng S, Vongsavang S, Wibunjak K, Chai-In P, Thavethanutthanawin P, Althaus T, Greer RC, Nedsuwan S, Wangrangsimakul T, Limmathurotsakul D, Elliott E, and Ariana P
- Subjects
- Adult, Cross-Sectional Studies, Female, Humans, Laos, Male, Surveys and Questionnaires, Thailand, Anti-Bacterial Agents therapeutic use, Drug Resistance, Microbial, Health Knowledge, Attitudes, Practice, Rural Population statistics & numerical data
- Abstract
Introduction: Low-income and middle-income countries (LMICs) are crucial in the global response to antimicrobial resistance (AMR), but diverse health systems, healthcare practices and cultural conceptions of medicine can complicate global education and awareness-raising campaigns. Social research can help understand LMIC contexts but remains under-represented in AMR research., Objective: To (1) Describe antibiotic-related knowledge, attitudes and practices of the general population in two LMICs. (2) Assess the role of antibiotic-related knowledge and attitudes on antibiotic access from different types of healthcare providers., Design: Observational study: cross-sectional rural health behaviour survey, representative of the population level., Setting: General rural population in Chiang Rai (Thailand) and Salavan (Lao PDR), surveyed between November 2017 and May 2018., Participants: 2141 adult members (≥18 years) of the general rural population, representing 712 000 villagers., Outcome Measures: Antibiotic-related knowledge, attitudes and practices across sites and healthcare access channels., Findings: Villagers were aware of antibiotics (Chiang Rai: 95.7%; Salavan: 86.4%; p<0.001) and drug resistance (Chiang Rai: 74.8%; Salavan: 62.5%; p<0.001), but the usage of technical concepts for antibiotics was dwarfed by local expressions like 'anti-inflammatory medicine' in Chiang Rai (87.6%; 95% CI 84.9% to 90.0%) and 'ampi' in Salavan (75.6%; 95% CI 71.4% to 79.4%). Multivariate linear regression suggested that attitudes against over-the-counter antibiotics were linked to 0.12 additional antibiotic use episodes from public healthcare providers in Chiang Rai (95% CI 0.01 to 0.23) and 0.53 in Salavan (95% CI 0.16 to 0.90)., Conclusions: Locally specific conceptions and counterintuitive practices around antimicrobials can complicate AMR communication efforts and entail unforeseen consequences. Overcoming 'knowledge deficits' alone will therefore be insufficient for global AMR behaviour change. We call for an expansion of behavioural AMR strategies towards 'AMR-sensitive interventions' that address context-specific upstream drivers of antimicrobial use (eg, unemployment insurance) and complement education and awareness campaigns., Trial Registration Number: Clinicaltrials.gov identifier NCT03241316., Competing Interests: Competing interests: None declared., (© Author(s) (or their employer(s)) 2019. Re-use permitted under CC BY. Published by BMJ.)
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- 2019
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42. Alcohol Use Disorder among Patients Suffered from Road Collisions in a Vietnamese Delta Province.
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Vu HM, Tran TT, Vu GT, Nguyen CT, Nguyen CM, Vu LG, Tran TH, Tran BX, Latkin CA, Ho CSH, and Ho RCM
- Subjects
- Adult, Cross-Sectional Studies, Female, Humans, Male, Mass Media, Middle Aged, Risk Factors, Thailand, Vietnam epidemiology, Accidents, Traffic, Alcohol Drinking epidemiology, Alcoholism complications, Automobile Driving legislation & jurisprudence, Driving Under the Influence
- Abstract
Traffic collisions have continuously been ranked amongst the top causes of deaths in Vietnam. In particular, drinking has been recognized as a major factor amplifying the likelihood of traffic collisions in various settings. This study aims to examine the relationship between alcohol use and traffic collisions in the current context of Vietnam. A cross-sectional study was conducted on 413 traffic collisions patients in six health facilities in the Thai Binh Province to investigate the level of alcohol consumption and identify factors influencing alcohol use among these patients. The Alcohol Use Disorders Identification Test-Consumption (AUDIT-C) scale was used to determine the problematic drinking behavior of the participants. The percentage of patients having problematic drinking was more than 30%. Being male, having a high household income, and working as farmer/worker were risk factors for alcohol abuse. People causing accidents and patients with a traumatic brain injury had a higher likelihood of drinking alcohol before the accidents. This study highlights the necessity of more stringent laws on reducing drink-driving in Vietnam. In addition, more interventions, especially those utilizing mass media like educational campaign of good behavior on social networks, are necessary to reduce alcohol consumption in targeted populations in order to decrease the prevalence and burden of road injuries.
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- 2019
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43. The High Technology Measure the Risk of Noncommunicable Diseases, Confidence the Gender in the Prevalence of Health Information for the Decision-Making in Si Sa Ket Province, Thailand.
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Khemthong K, Turnbull N, Suwanlee SR, and Peltzer K
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- Adolescent, Adult, Aged, Cross-Sectional Studies, Female, Humans, Male, Middle Aged, Prevalence, Risk Factors, Smoking, Thailand, Young Adult, Decision Making, Computer-Assisted, Hypertension, Medical Informatics, Noncommunicable Diseases prevention & control
- Abstract
Noncommunicable diseases (NCDs) are incurable disease, which causes by the risk factors. This study aimed to determine the prevalence and distribution of the risk factors associated according to gender. A cross-sectional survey on Health dataset between October 2013 and April 2017 of people, age 13 years and older about 1,245,462 people, using the high technology and the STEPS approach questionnaire by the WHO. The questions included demographic, behaviour and metabolic. The results found that the prevalence of the risk NCDs were 611,099 people (49.07%) Most risk factors was tobacco use in men (p-value<001), waist in women (p-value<001), having diabetes mellitus family in men (p-value<001), having hypertension family in men (p-value<001), alcohol consumption in men (p-value<001), blood pressure in women (p-value<001), blood sugar level in women (p-value<001), BMI in women (p-value<001), and cholesterol level in women (p-value<001). This data indicates that the prevalence of behaviour needs to be concerning and decision-making to prevention.
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- 2019
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44. A Longitudinal Study of Behavioral Risk, Adherence, and Virologic Control in Adolescents Living With HIV in Asia.
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Ross JL, Teeraananchai S, Lumbiganon P, Hansudewechakul R, Chokephaibulkit K, Khanh TH, Van Nguyen L, Mohamed TAJ, Yusoff NKN, Fong MS, Prasitsuebsai W, Sohn AH, and Kerr SJ
- Subjects
- Adolescent, Anti-Retroviral Agents therapeutic use, Disclosure, Female, HIV Infections drug therapy, Humans, Longitudinal Studies, Malaysia, Male, Prospective Studies, Risk Factors, Risk-Taking, Sexual Behavior, Social Stigma, Thailand, Vietnam, Viral Load, Behavioral Risk Factor Surveillance System, HIV Infections psychology, Medication Adherence
- Abstract
Background: Adolescents living with HIV (ALHIV) have poorer adherence and clinical outcomes than adults. We conducted a study to assess behavioral risks and antiretroviral therapy outcomes among ALHIV in Asia., Methods: A prospective cohort study among ALHIV and matched HIV-uninfected controls aged 12-18 years was conducted at 9 sites in Malaysia, Thailand, and Vietnam from July 2013 to March 2017. Participants completed an audio computer-assisted self-interview at weeks 0, 48, 96, and 144. Virologic failure (VF) was defined as ≥1 viral load (VL) measurement >1000 copies/mL. Generalized estimating equations were used to identify predictors for VF., Results: Of 250 ALHIV and 59 HIV-uninfected controls, 58% were Thai and 51% females. The median age was 14 years at enrollment; 93% of ALHIV were perinatally infected. At week 144, 66% of ALHIV were orphans vs. 28% of controls (P < 0.01); similar proportions of ALHIV and controls drank alcohol (58% vs. 65%), used inhalants (1% vs. 2%), had been sexually active (31% vs. 21%), and consistently used condoms (42% vs. 44%). Of the 73% of ALHIV with week 144 VL testing, median log VL was 1.60 (interquartile range 1.30-1.70) and 19% had VF. Over 70% of ALHIV had not disclosed their HIV status. Self-reported adherence ≥95% was 60% at week 144. Smoking cigarettes, >1 sexual partner, and living with nonparent relatives, a partner or alone, were associated with VF at any time., Conclusions: The subset of ALHIV with poorer adherence and VF require comprehensive interventions that address sexual risk, substance use, and HIV-status disclosure.
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- 2019
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45. Three phylogenetic groups have driven the recent population expansion of Cryptococcus neoformans.
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Ashton PM, Thanh LT, Trieu PH, Van Anh D, Trinh NM, Beardsley J, Kibengo F, Chierakul W, Dance DAB, Rattanavong S, Davong V, Hung LQ, Chau NVV, Tung NLN, Chan AK, Thwaites GE, Lalloo DG, Anscombe C, Nhat LTH, Perfect J, Dougan G, Baker S, Harris S, and Day JN
- Subjects
- AIDS-Related Opportunistic Infections epidemiology, Antifungal Agents therapeutic use, Clinical Trials as Topic, Cryptococcosis epidemiology, Cryptococcus neoformans isolation & purification, Cryptococcus neoformans pathogenicity, Humans, Incidence, Laos epidemiology, Malawi epidemiology, Thailand epidemiology, Treatment Outcome, Uganda epidemiology, Vietnam epidemiology, Whole Genome Sequencing, AIDS-Related Opportunistic Infections microbiology, Cryptococcosis microbiology, Cryptococcus neoformans genetics, Genome, Fungal genetics, Phylogeny
- Abstract
Cryptococcus neoformans (C. neoformans var. grubii) is an environmentally acquired pathogen causing 181,000 HIV-associated deaths each year. We sequenced 699 isolates, primarily C. neoformans from HIV-infected patients, from 5 countries in Asia and Africa. The phylogeny of C. neoformans reveals a recent exponential population expansion, consistent with the increase in the number of susceptible hosts. In our study population, this expansion has been driven by three sub-clades of the C. neoformans VNIa lineage; VNIa-4, VNIa-5 and VNIa-93. These three sub-clades account for 91% of clinical isolates sequenced in our study. Combining the genome data with clinical information, we find that the VNIa-93 sub-clade, the most common sub-clade in Uganda and Malawi, was associated with better outcomes than VNIa-4 and VNIa-5, which predominate in Southeast Asia. This study lays the foundation for further work investigating the dominance of VNIa-4, VNIa-5 and VNIa-93 and the association between lineage and clinical phenotype.
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- 2019
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46. Do Intracerebral Cytokine Responses Explain the Harmful Effects of Dexamethasone in Human Immunodeficiency Virus-associated Cryptococcal Meningitis?
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Beardsley J, Hoang NLT, Kibengo FM, Tung NLN, Binh TQ, Hung LQ, Chierakul W, Thwaites GE, Chau NVV, Nguyen TTT, Geskus RB, and Day JN
- Subjects
- Adaptor Proteins, Signal Transducing cerebrospinal fluid, Adaptor Proteins, Signal Transducing genetics, Chemokine CCL2 cerebrospinal fluid, Chemokine CCL2 genetics, Cryptococcus drug effects, Cryptococcus growth & development, Cryptococcus pathogenicity, Epoxide Hydrolases cerebrospinal fluid, Genotype, Granulocyte-Macrophage Colony-Stimulating Factor cerebrospinal fluid, Granulocyte-Macrophage Colony-Stimulating Factor genetics, HIV growth & development, HIV pathogenicity, HIV Infections complications, HIV Infections immunology, HIV Infections mortality, Humans, Interferon-gamma cerebrospinal fluid, Interferon-gamma genetics, Interleukins cerebrospinal fluid, Interleukins genetics, Meningitis, Cryptococcal complications, Meningitis, Cryptococcal immunology, Meningitis, Cryptococcal mortality, Survival Analysis, Thailand, Treatment Outcome, Tumor Necrosis Factor-alpha cerebrospinal fluid, Tumor Necrosis Factor-alpha genetics, Uganda, Vietnam, Dexamethasone adverse effects, Epoxide Hydrolases genetics, Gene Expression drug effects, Glucocorticoids adverse effects, HIV Infections drug therapy, Meningitis, Cryptococcal drug therapy
- Abstract
Background: The CryptoDex trial showed that dexamethasone caused poorer clinical outcomes and slowed fungal clearance in human immunodeficiency virus-associated cryptococcal meningitis. We analyzed cerebrospinal fluid (CSF) cytokine concentrations from participants over the first week of treatment to investigate mechanisms of harm and test 2 hypotheses: (1) dexamethasone reduced proinflammatory cytokine concentrations, leading to poorer outcomes and (2) leukotriene A4 hydrolase (LTA4H) genotype influenced the clinical impact of dexamethasone, as observed in tuberculous meningitis., Methods: We included participants from Vietnam, Thailand, and Uganda. Using the Luminex system, we measured CSF concentrations of the following: interferon γ, tumor necrosis factor (TNF) α, granulocyte-macrophage colony-stimulating factor, monocyte chemoattractant 1, macrophage inflammatory protein 1α, and interleukin 6, 12p70, 8, 4, 10, and 17. We determined the LTA4H genotype based on the promoter region single-nucleotide polymorphism rs17525495. We assessed the impact of dexamethasone on cytokine concentration dynamics and the association between cytokine concentration dynamics and fungal clearance with mixed effect models. We measured the influence of LTA4H genotype on outcomes with Cox regression models., Results: Dexamethasone increased the rate TNF-α concentration's decline in (-0.13 log2pg/mL/d (95% confidence interval, -.22 to -.06 log2pg/mL/d; P = .03), which was associated with slower fungal clearance (correlation, -0.62; 95% confidence interval, -.83 to -.26). LTA4H genotype had no statistically significant impact on outcome or response to dexamethasone therapy. Better clinical outcomes were associated with higher baseline concentrations of interferon γ., Conclusions: Dexamethasone may slow fungal clearance and worsen outcomes by increasing TNF-α concentration's rate of decline., (© The Author(s) 2018. Published by Oxford University Press for the Infectious Diseases Society of America.)
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- 2019
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47. Sofosbuvir-velpatasvir for treatment of chronic hepatitis C virus infection in Asia: a single-arm, open-label, phase 3 trial.
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Wei L, Lim SG, Xie Q, Văn KN, Piratvisuth T, Huang Y, Wu S, Xu M, Tang H, Cheng J, Le Manh H, Gao Y, Mou Z, Sobhonslidsuk A, Dou X, Thongsawat S, Nan Y, Tan CK, Ning Q, Tee HP, Mao Y, Stamm LM, Lu S, Dvory-Sobol H, Mo H, Brainard DM, Yang YF, Dao L, Wang GQ, Tanwandee T, Hu P, Tangkijvanich P, Zhang L, Gao ZL, Lin F, Le TTP, Shang J, Gong G, Li J, Su M, Duan Z, Mohamed R, Hou JL, and Jia J
- Subjects
- Adult, China, Drug Combinations, Female, Genotype, Headache chemically induced, Hepacivirus genetics, Hepatitis C, Chronic blood, Hepatitis C, Chronic complications, Hepatitis C, Chronic virology, Humans, Liver Cirrhosis etiology, Male, Middle Aged, RNA, Viral blood, Respiratory Tract Infections chemically induced, Singapore, Sustained Virologic Response, Thailand, Treatment Outcome, Vietnam, Antiviral Agents therapeutic use, Carbamates therapeutic use, Hepatitis C, Chronic drug therapy, Heterocyclic Compounds, 4 or More Rings therapeutic use, Liver Cirrhosis blood, Sofosbuvir therapeutic use
- Abstract
Background: Treatment with combined sofosbuvir and velpatasvir has resulted in high sustained virological response rates in patients chronically infected with hepatitis C virus (HCV) with genotypes 1-6 in clinical trials and real-world settings, but its efficacy and safety has not been assessed in Asia, a region with diverse HCV genotypes., Methods: In this single-arm, open-label, phase 3 trial, we recruited patients from 38 sites across China, Thailand, Vietnam, Singapore, and Malaysia, who were chronically infected with HCV genotypes 1-6, and were HCV treatment-naive or treatment-experienced, either without cirrhosis or with compensated cirrhosis. Patients self-administered a combined sofosbuvir (400 mg) and velpatasvir (100 mg) tablet once daily for 12 weeks. The primary efficacy endpoint was sustained virological response, defined as HCV RNA less than 15 IU/mL at 12 weeks after completion of treatment (SVR12), assessed in all patients who received at least one dose of study drug. The primary safety endpoint was the proportion of adverse events leading to premature discontinuation of study drug. This trial is registered with ClinicalTrials.gov, number NCT02671500, and is completed., Findings: Between April 14, 2016, and June 30, 2017, 375 patients were enrolled in the study, of whom 374 completed the full treatment course and one discontinued treatment. Overall, 362 (97% [95% CI 94-98]) of 375 patients achieved SVR12. Among 42 patients with HCV genotype 3b, all of whom had baseline resistance-associated substitutions in NS5A, 25 (89% [95% CI 72-98]) of 28 patients without cirrhosis and seven (50% [23-77]) of 14 patients with cirrhosis achieved SVR12. The most common adverse events were upper respiratory tract infection (36 [10%] patients) and headache (18 [5%] patients). There were no discontinuations due to adverse events. Serious adverse events were reported in three (1%) patients, none of which was judged to be related to sofosbuvir-velpatasvir treatment., Interpretation: Consistent with data from other phase 3 studies, single-tablet sofosbuvir-velpatasvir for 12 weeks is an efficacious and safe treatment for Asian patients with chronic HCV infection, but might have lower efficacy in those infected with HCV genotype 3b and with cirrhosis., Funding: Gilead Sciences., (Copyright © 2019 Elsevier Ltd. All rights reserved.)
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- 2019
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48. Risk Factors for Human Papillomavirus Infection and Abnormal Cervical Cytology Among Perinatally Human Immunodeficiency Virus-Infected and Uninfected Asian Youth.
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Sohn AH, Kerr SJ, Hansudewechakul R, Gatechompol S, Chokephaibulkit K, Dang HLD, Tran DNH, Achalapong J, Teeratakulpisarn N, Chalermchockcharoenkit A, Thamkhantho M, Pankam T, Singtoroj T, Termrungruanglert W, Chaithongwongwatthana S, and Phanuphak N
- Subjects
- Adolescent, CD4 Lymphocyte Count, Female, HIV isolation & purification, HIV Infections epidemiology, Humans, Longitudinal Studies, Pregnancy, Pregnancy Complications, Infectious epidemiology, Risk Factors, Sexually Transmitted Diseases epidemiology, Thailand epidemiology, Vaginal Smears, Vietnam epidemiology, Viral Load, Young Adult, Cervix Uteri pathology, HIV Infections complications, Papillomavirus Infections epidemiology, Pregnancy Complications, Infectious virology, Sexually Transmitted Diseases complications
- Abstract
Background: Infection with high-risk human papillomavirus (HR-HPV) may be higher in perinatally human immunodeficiency virus (HIV)-infected (PHIV) than HIV-uninfected (HU) adolescents because of long-standing immune deficiency., Methods: PHIV and HU females aged 12-24 years in Thailand and Vietnam were matched by age group and lifetime sexual partners. At enrollment, blood, cervical, vaginal, anal, and oral samples were obtained for HPV-related testing. The Wilcoxon and Fisher exact tests were used for univariate and logistic regression for multivariate analyses., Results: Ninety-three PHIV and 99 HU adolescents (median age 19 [18-20] years) were enrolled (June 2013-July 2015). Among PHIV, 94% were currently receiving antiretroviral therapy, median CD4 count was 593 (392-808) cells/mm3, and 62% had a viral load <40 copies/mL. Across anogenital compartments, PHIV had higher rates of any HPV detected (80% vs 60%; P = .003) and any HR-HPV (60% vs 43%, P = .02). Higher proportions of PHIV had abnormal Pap smears (eg, atypical squamous cells of unknown significance [ASC-US], 12% vs 14%; low-grade squamous intraepithelial neoplastic lesions, 19% vs 1%). After adjusting for ever being pregnant and asymptomatic sexually transmitted infections (STI) at enrollment, PHIV were more likely to have HR-HPV than HU (odds ratio, 2.02; 95% confidence interval, 1.09-3.77; P = .03)., Conclusions: Perinatal HIV infection was associated with a higher risk of HR-HPV and abnormal cervical cytology. Our results underscore the need for HPV vaccination for PHIV adolescents and for prevention and screening programs for HPV and other STIs.
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- 2018
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49. Adherence to antiretroviral therapy, stigma and behavioral risk factors in HIV-infected adolescents in Asia.
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Prasitsuebsai W, Sethaputra C, Lumbiganon P, Hansudewechakul R, Chokephaibulkit K, Truong KH, Nguyen LV, Mohd Razali KA, Nik Yusoff NK, Fong MS, Teeraananchai S, Ananworanich J, and Durier N
- Subjects
- Adolescent, Case-Control Studies, Child, Female, HIV, Humans, Malaysia, Male, Prospective Studies, Risk Factors, Sexual Behavior, Thailand, Vietnam, Anti-HIV Agents therapeutic use, HIV Infections drug therapy, HIV Infections psychology, Medication Adherence, Risk-Taking, Social Stigma
- Abstract
We studied behavioral risks among HIV-infected and uninfected adolescents using an audio computer-assisted self-interview. A prospective cohort study was initiated between 2013 and 2014 in Malaysia, Thailand, and Vietnam. HIV-infected adolescents were matched to uninfected adolescents (4:1) by sex and age group (12-14 and 15-18 years). We enrolled 250 HIV-infected (48% male; median age 14.5 years; 93% perinatally infected) and 59 uninfected (51% male; median age 14.1 years) adolescents. At enrollment, HIV-infected adolescents were on antiretroviral therapy (ART) for a median (IQR) of 7.5 (4.7-10.2) years, and 14% had HIV-RNA >1000 copies/mL; 19% reported adherence <80%. Eighty-four (34%) HIV-infected and 26 (44%) uninfected adolescents reported having ever smoked cigarettes or drunk alcohol (p = 0.13); 10% of HIV-infected and 17% of uninfected adolescents reported having initiated sexual activity; 6 of the HIV-infected adolescents had HIV-RNA >1000 copies/mL. Risk behaviors were common among adolescents, with few differences between those with and without HIV.
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- 2018
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50. Synchrony of Dengue Incidence in Ho Chi Minh City and Bangkok.
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Hoang Quoc C, Henrik S, Isabel RB, In-Kyu Y, Chau NV, Hung NT, Tuan HM, Lan PT, Willis B, Nisalak A, Kalayanarooj S, Cummings DA, and Simmons CP
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- Adolescent, Adult, Age Distribution, Aged, Aged, 80 and over, Animals, Child, Child, Preschool, Climate, Female, Genetic Variation, Humans, Incidence, Infant, Infant, Newborn, Insect Vectors virology, Linear Models, Male, Middle Aged, Prospective Studies, Serogroup, Thailand epidemiology, Vietnam epidemiology, Young Adult, Dengue epidemiology, Dengue Virus classification
- Abstract
Background: Ho Chi Minh City and Bangkok are highly dengue endemic. The extent to which disease patterns are attributable to local versus regional dynamics remains unclear. To address this gap we compared key transmission parameters across the locations., Methods and Principal Findings: We used 2003-2009 age-stratified case data to inform catalytic transmission models. Further, we compared the spatial clustering of serotypes within each city. We found that annual case numbers were highly consistent across the two cities (correlation of 0.77, 95% CI: 0.74-0.79) as was the annual force of infection (correlation of 0.57, 95% CI: 0.46-0.68). Serotypes were less similar with serotype-specific correlations ranging from 0.65 for DENV1 to -0.14 for DENV4. Significant spatial clustering of serotypes was observed in HCMC at distances <500m, similar to previous observations from Bangkok., Discussions: Dengue dynamics are comparable across these two hubs. Low correlation in serotype distribution suggests that similar built environments, vector populations and climate, rather than viral flow drives these observations., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2016
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