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Simple Summary: Talaromyces species are distributed all around the world and occur in various environments, e.g., soil, air, living or rotten plants, and indoors. Some of them produce enzymes and pigments of industrial importance, while some cause Talaromycosis. Talaromyces marneffei, a well-known and important human pathogen, is endemic to Southeast Asia and causes high mortality, especially in HIV/AIDS patients and those with other immunodeficiencies. China covers 3 of the 35 global biodiversity hotspots. During the explorations of fungal diversity in soil samples collected at different sites of southwestern China, two new Talaromyces species, T. chongqingensis X.C. Wang and W.Y. Zhuang and T. wushanicus X.C. Wang and W.Y. Zhuang, were discovered based on phylogenetic analyses and morphological comparisons. They are described and illustrated in detail. Six phylogenetic trees of the sections Talaromyces and Trachyspermi were constructed based on three-gene datasets and revealed the phylogenetic positions of the new species. This work provided a better understanding of biodiversity and phylogeny of the genus. The results make the concepts of the two sections of Talaromyces well-established. The discovery will be beneficial for future evaluation of the potential usages and functions of the new species. Southwestern China belongs among the global biodiversity hotspots and the Daba Mountains are recognized as one of the priority conservation areas. During the exploration of fungal biodiversity from soil samples collected from Mount Daba, two species of Talaromyces were discovered as new to science based on phylogenetic analyses and morphological comparisons. Talaromyces chongqingensis sp. nov. is a sister taxon of T. minioluteus and T. minnesotensis in the section Trachyspermi; and T. wushanicus sp. nov., affiliated to the section Talaromyces, is closely related to T. cnidii and T. siamensis. The new species differ from their sisters in DNA sequences, growth rates, and morphological characteristics. Descriptions and illustrations of them are provided in detail. [ABSTRACT FROM AUTHOR]