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Invasive nostocalean cyanobacteria (INC) were first reported in tropical regions and are now globally spreading rapidly due to climate change, appearing in temperate regions. INC require continuous monitoring for water resource management because of their high toxin production potential. However, it is difficult to analyze INC under a microscope because of their morphological similarity to nostocalean cyanobacteria such as the genus Aphanizomenon. This study calculates the gene copy number per cell for each target gene through quantitative gene analysis on the basis of genus-specific primers of genera Cylindrospermopsis, Sphaerospermopsis, and Cuspidothrix, and the toxin primers of anatoxin-a, saxitoxin, and cylindrospermopsin. In addition, quantitative gene analysis was performed at eight sites in the Nakdong River to assess the appearance of INC and their toxin production potential. Genera Cylindrospermopsis and Sphaerospermopsis did not exceed 100 cells mL−1 at the maximum, with a low likelihood of related toxin occurrence. The genus Cuspidothrix showed the highest cell density (1759 cells mL−1) among the INC. Nakdong River has potential for the occurrence of anatoxin-a through biosynthesis by genus Cuspidothrix because the appearance of this genus coincided with that of the anatoxin-a synthesis gene (anaF) and the detection of the toxin by ELISA. [ABSTRACT FROM AUTHOR]

• Invasive nostocalean cyanobacteria have been found in temperate region, nakdong River, korea. • A low quantity of invasive nostocalean cyanobacteria occurred from spring to winter. • Three genera, four species, and twenty-four strains of invasive nostocalean cyanobacteria were isolated from the nakdong river. • Neurotoxin anatoxin-a was verified in the nakdong river cuspidothrix issatschenkoi isolates. The extent and frequency of harmful cyanobacterial blooms are increasing, owing to the climate change caused by global warming, and some harmful filamentous cyanobacteria that were first reported in the tropics are spreading to temperate regions, such as North America, Europe, and Northeast Asia. Although these exotic invasive cyanobacteria have a high toxigenic potential, they are not targeted in management plans in many countries. This study analyzed the occurrence of and potential toxin and off-flavor secondary metabolite production by invasive nostocalean cyanobacteria in the Nakdong River in Korea, which is a temperate region. The occurrence of four species belonging to three genera of cyanobacteria was confirmed in the Nakdong River. The quantities of cyanobacteria in the Nakdong River were mostly low, fewer than 1,000 cells mL−1. Twenty-four strains belonging to four species in three genera of cyanobacteria were isolated from the Nakdong River. Analysis revealed no off-flavor secondary metabolite production by any of the isolates, and those belonging to Cylindrospermopsis raciborskii, Sphaerospermopsis aphanizomenoides, and S. reniformis were identified as nontoxic strains. However, anatoxin-a production was observed in two of the eleven isolates of Cuspidothrix issatschenkoi. Given the sites and the timing of its occurrence, C. issatschenkoi had the highest potential for toxin production among the invasive nostocalean cyanobacteria appearing in the Nakdong River. [ABSTRACT FROM AUTHOR]