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The biogeography of bacterial communities is a key topic in Microbial Ecology. Regarding continental water, most studies are carried out in the northern hemisphere, leaving a gap on microorganism's diversity patterns on a global scale. South America harbours approximately one third of the world's total freshwater resources, and is one of these understudied regions. To fill this gap, we compiled 16S rRNA amplicon sequencing data of microbial communities across South America continental water ecosystems, presenting the first database µSudAqua[db]. The database contains over 866 georeferenced samples from 9 different ecoregions with contextual environmental information. For its integration and validation we constructed a curated database (µSudAqua[db.sp]) using samples sequenced by Illumina MiSeq platform with commonly used prokaryote universal primers. This comprised ~60% of the total georeferenced samples of the µSudAqua[db]. This compilation was carried out in the scope of the µSudAqua collaborative network and represents one of the most complete databases of continental water microbial communities from South America. Measurement(s) taxonomic diversity assessment by targeted gene survey Technology Type(s) next generation DNA sequencing Sample Characteristic - Organism Bacteria • Archaea Sample Characteristic - Environment aquatic environment Sample Characteristic - Location South America [ABSTRACT FROM AUTHOR]

Abstract: We examined the zooplankton abundance and composition of Laguna Grande, a floodplain wetland of the Lower Paraná Basin (Argentina), during an extraordinary drought–flood cycle that affected both the environment and the biological conditions of the lake. Low waters were characterised by remarkably high conductivities and pH values, and high phytoplankton and bacterioplankton abundances with cyanobacterial blooms, while high waters showed opposite features. In relation to zooplankton, the mean abundances of all the taxonomic groups (rotifers, cladocerans, copepods, ciliates, and heterotrophic nanoflagellates) were slightly higher at low waters. Major changes were observed in the specific composition of metazooplankton: the euryhaline species assemblage that dominated in the dry warm period was replaced by several oligohaline littoral and planktonic species characteristic of the Paraná River Basin, when the water level rose. Mean species richness values at high waters doubled those of low waters and were directly correlated to water depth. Most of the rotifers of the genus Brachionus and the cladoceran Moina micrura switched from parthenogenetic to sexual reproduction during low waters, as a response to a harsh environment and crowding. We suggest that the main changes in the environmental conditions in this eutrophic floodplain lake are driven by the hydrology, which regulates the zooplankton succession. The herein described shifts in the zooplankton structure and dynamics of Laguna Grande over an extraordinary drought–flood cycle contribute to the understanding of the processes that might occur under the scenarios predicted by climate change models. [Copyright &y& Elsevier]