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Digital elevation models (DEMs) have a wide range of applications and play a crucial role in many studies. Numerous public DEMs, frequently acquired using radar and optical satellite imagery, are currently available; however, DEM datasets tend to exhibit elevation values influenced by vegetation height and coverage, compromising the accuracy of models in representing terrain elevation. In this study, we developed a digital terrain model for South America using a novel methodology to remove vegetation bias in the Copernicus DEM GLO-30 (COPDEM) model using machine learning, Global Ecosystem Dynamics Investigation (GEDI) elevation data, and multispectral remote sensing products. Our results indicate considerable improvements compared to COPDEM in representing terrain elevation, reducing average errors (BIAS) from 9.6 m to 1.5 m. Furthermore, we evaluated our product (ANADEM) by comparison with other global DEMs, obtaining more accurate results for different conditions of vegetation fraction cover and land use. As a publicly available and open-source dataset, ANADEM will play a crucial role in advancing studies that demand accurate terrain elevation representations at large scales. [ABSTRACT FROM AUTHOR]

This study examined the spatial and temporal patterns of the canopy layer urban heat islands (UHIUCL) in a small city in southeastern Brazil using the local climate zone (LCZ) system. We analysed the influence of weather conditions, LCZs characteristics, and local surface relief on the UHIUCL magnitudes. Mobile traverses were used to measure air temperatures during representative nights of wet and dry seasons. Daily maximum magnitudes were observed in compact classes (LCZs 3 and 7) under ideal weather conditions (dry, clear skies, and calm) and higher anthropogenic heat release (weekdays). Seasonal effects on LCZ thermal differences were negligible. The peripheral landscapes were warmer than the city centre in both seasons. Among the warmer areas in the city, magnitudes in compact LCZs 3 and 7 were consistently higher than in LCZ 6. In general, representative sites of the main 'built' LCZs in the study area exhibit similar inter‐zone temperature patterns to those reported for cities of different sizes from tropical and midlatitude regions. Thermal contrasts of ΔTLCZ 3 − D in the study area reveal significant evidence that small cities can have as strong heat islands as bigger cities. These findings highlight the importance of the LCZ system to identify the main controlling factors driving such thermal differences and the need to extend the application of this approach in other South American cities to yield systematic data of UHIUCL for urban planning given the coming challenges of climate change over the region. [ABSTRACT FROM AUTHOR]

Objectives: The aim of this study is to evaluate some mechanisms of the immune response of people infected with SARS-CoV-2 in both acute infection and early and late convalescence phases. Methods: This is a cohort study of 70 cases of COVID-19, confirmed by RT-PCR, followed up to 60 days. Plasma Samples and clinical data were. Viral load, blood count, indicators inflammation were the parameters evaluated. Cellular immune response was evaluated by flow cytometry and Luminex immunoassays. Results: In the severe group, hypertension was the only reported comorbidity. Non severe patients have activated memory naive CD4+ T cells. Critically ill patients have central memory CD4+ T cell activation. Severe COVID-19 patients have both central memory and activated effector CD8+ T cells. Non-severe COVID-19 cases showed an increase in IL1β, IL-6, IL-10 and TNF and severely ill patients had higher levels of the cytokines IL-6, IL-10 and CXCL8. Conclusions: The present work showed that different cellular responses are observed according to the COVID-19 severity in patients from Brazil an epicenter the pandemic in South America. Also, we notice that some cytokines can be used as predictive markers for the disease outcome, possibility implementation of strategies effective by health managers. [ABSTRACT FROM AUTHOR]

Pumping systems, especially those used in the water supply sector and in industrial and hydroelectric facilities, are commonly infested by the golden mussel. This causes an increase in maintenance operations (e.g., system shutdowns for cleaning) that can generate an increased energy cost. The geographical expansion of the golden mussel in Latin America presents an economic risk, not only to the ecosystem in general, but also to the energy sector. The imminence of its spread in the Amazon region, one of the main river basins in South America, is cause for concern with regard to the problems that bioinvasion of this species can cause. Given the absence of studies on the loss of energy efficiency in pumping systems impacted by the golden mussel, this study proposes a methodology to estimate the increase in energy consumption and costs of pumping under such bioinfestation. For the standardization of the methodology and development of mathematical calculations (both novel and improved equations), data from the literature (the growth of the golden mussel as a function of infestation time) and an analysis of the dimensions (length and height) of a sample of mussels available in the laboratory were considered. These data were used to calculate the roughness generated by the mussel infestation in the pumping suction and discharger pipe, which was necessary to determine the loss of energy efficiency (load loss, power consumption, and cost of pumping) resulting from the increase in energy consumption for pumping. This methodology was applied to a pumping station representative of the Brazilian Amazon as a case study. The results show an average increase in economic indicators (consumption and cost of pumping) after the system undergoes bioinfestation. This total increase corresponded to 19% and 44% in the first and second years, respectively, achieving a stabilization of the increase in the cost of pumping at 46%, in the 30 months of operation. Our results demonstrate the pioneering nature of the proposal, since these are the first quantitative data on the energy efficiency of pumping systems associated with bioinfestation by the golden mussel. These results can also be used to estimate the increase in costs caused by golden mussel bioinfestation in the raw water pumping systems of other facilities. [ABSTRACT FROM AUTHOR]

Persons living with HIV engage in routine clinical care, generating large amounts of data in observational HIV cohorts. These data are often error‐prone, and directly using them in biomedical research could bias estimation and give misleading results. A cost‐effective solution is the two‐phase design, under which the error‐prone variables are observed for all patients during Phase I, and that information is used to select patients for data auditing during Phase II. For example, the Caribbean, Central, and South America network for HIV epidemiology (CCASAnet) selected a random sample from each site for data auditing. Herein, we consider efficient odds ratio estimation with partially audited, error‐prone data. We propose a semiparametric approach that uses all information from both phases and accommodates a number of error mechanisms. We allow both the outcome and covariates to be error‐prone and these errors to be correlated, and selection of the Phase II sample can depend on Phase I data in an arbitrary manner. We devise a computationally efficient, numerically stable EM algorithm to obtain estimators that are consistent, asymptotically normal, and asymptotically efficient. We demonstrate the advantages of the proposed methods over existing ones through extensive simulations. Finally, we provide applications to the CCASAnet cohort. [ABSTRACT FROM AUTHOR]

Background. Terrestrial biomes in South America are likely to experience a persistent increase in environmental temperature, possibly combined with moisture reduction due to climate change. In addition, natural fire ignition sources, such as lightning, can become more frequent under climate change scenarios since favourable environmental conditions are likely to occur more often. In this sense, changes in the frequency and magnitude of natural fires can impose novel stressors on different ecosystems according to their adaptation to fires. By focusing on Brazilian biomes, we use an innovative combination of techniques to quantify fire persistence and occurrence patterns over time and evaluate climate risk by considering key fire-related climatic characteristics. Then, we tested four major hypotheses considering the overall characteristics of firedependent, fire-independent, and fire-sensitive biomes concerning (1) fire persistence over time; (2) the relationship between climate and fire occurrence; (3) future predictions of climate change and its potential impacts on fire occurrence; and (4) climate risk faced by biomes. Methods. We performed a Detrended Fluctuation Analysis to test whether fires in Brazilian biomes are persistent over time. We considered four bioclimatic variables whose links to fire frequency and intensity are well-established to assess the relationship between climate and fire occurrence by confronting these climate predictors with a fire occurrence dataset through correlative models. To assess climate risk, we calculated the climate hazard, sensitivity, resilience, and vulnerability of Brazilian biomes, and then we multiplied the Biomes' vulnerability index by the hazards. Results. Our results indicate a persistent behaviour of fires in all Brazilian biomes at almost the same rates, which could represent human-induced patterns of fire persistence. We also corroborated our second hypothesis by showing that most fire-dependent biomes presented high thermal suitability to fire, while the fireindependent biome presented intermediate suitability and fire-sensitive biomes are the least suitable for fire occurrence. The third hypothesis was partially corroborated since fire-dependent and independent biomes are likely to increase their thermal suitability to fire, while fire-sensitive biomes are likely to present stable-to-decreasing thermal suitability in the future. Finally, our fourth hypothesis was partially corroborated since most fire-dependent biomes presented low climate risk, while the fire-independent biome presented a high risk and the fire-sensitive biomes presented opposite trends. In summary, while the patterns of fire persistence and fire occurrence over time are more likely to be related to human-induced fires, key drivers of burned areas are likely to be intensified across Brazilian biomes in the future, potentially increasing the magnitude of the fires and harming the biomes' integrity. [ABSTRACT FROM AUTHOR]

Anablepsoides is a widely distributed Neotropical killifish genus found in shallow streams, in both dense forests and open areas, throughout northern and northeastern South America. The phylogenetic and biogeographic relationships of the genus are here analysed, based on two nuclear and four mitochondrial genes of 26 species and six out‐groups. The origin of Anablepsoides was recovered in Early Miocene in an area corresponding to the Paleo‐Amazon‐Orinoco system. The current analyses indicate that the initial diversification of the genus in two main clades was associated with marine transgressions related to the formation of the Pebas mega‐wetland isolating each MRCA of those main clades in the upper Amazon river basin and river basins of the Guiana Shield. The diversification of the genus and the colonisation of new areas may be associated with Miocene and Pliocene events such as changes in the sea level, formation and extinction of wetlands, rupture of the Purus arch and Amazon river assuming the current flow to the East. Also, the evolution of Anablepsoides could be associated with the diversification of several other Neotropical lineages, so that the present study leads to a better understanding of the evolution of the Neotropical freshwater biota and South American geological history. [ABSTRACT FROM AUTHOR]

Tovomitopsis Planch. & Triana is a Brazilian Atlantic Forest endemic genus composed of two species: T. paniculata (Spreng.) Planch. & Triana and T. saldanhae Engl. An investigation was conducted to clarify the nomenclatural history of Tovomitopsis. We report the results of this investigation, provide an updated description of the genus, and propose lectotypes for T. paniculata and its synonyms: Tovomita foliosa C.Presl and Tovomita paniculata Cambess. We also propose lectotypes for T. saldanhae and for the new synonym Clusia angustifolia Engl. [ABSTRACT FROM AUTHOR]

The list of threatened species (Red List), established by the International Union for Conservation of Nature (IUCN), aims to provide global assessments on the extinction risk of species. However, protecting vulnerable populations requires establishing threat criteria at sub-global scales, e.g., national Red Lists. In data-poor contexts, typical of many developing countries, assessing threat status by applying IUCN criteria constitutes a major challenge, which may be one reason for mismatches between national and global Red List assessments. Despite the intense harvesting of threatened elasmobranchs species in Brazilian waters, Brazilian fisheries monitoring has ceased to exist for nearly a decade. This jeopardizes accurate assessment of species' conservation status at a local scale. In the absence of fisheries records, local ecological knowledge (LEK) provides an alternative option to obtain reliable information on targeted species. We interviewed 186 fishers from four Brazilian Northeastern states, whose recollections spanned six decades and documented catches or sightings of 19 shark species. For eight species with sufficient data, temporal trends in maximum length of sharks caught by fishers of different age-classes were statistically tested. Four species' maximum length declined over time, while four were primarily captured by elderly fishers, with few or no recent catches reported. Of these species, one is classified more conservatively in the national Red List vs. IUCN Red List, which is supported by LEK results. Contrastingly, two species are classified less conservatively at the national level than by IUCN, such that upgrading and matching IUCN's conservation criteria is warranted. We suggest that LEK provides support for conservation status listing in data-poor contexts. [ABSTRACT FROM AUTHOR]

• A novel multilocus and highly supported phylogeny clarify several previously uncertain relationships in Myrcia. • Our results provide a solid backbone for further evolutionary and taxonomic work. • Previously unplaced Myrcia species formed a new circumscribed clade. • The first phylogenetic relationships for Myrcia sect. Gomidesia are shown with a morphological trait evolution and geographic range distribution approaches. • The inclusion of previously available molecular data with novel sequences of Myrcia and relatives significantly improved our phylogenetic estimates. Myrcia is the largest exclusively Neotropical genus of the plant family Myrtaceae with c. 770 species. Although several studies have elucidated the relationships within particular sections of the genus, to date no phylogeny has been produced that includes a broad taxonomic and geographic representation. Here we present a phylogenetic hypothesis of Myrcia and close relatives comprising 253 species and based on two nuclear and seven plastid markers. We combine previously available sequence data with 234 new sequences of the genus Myrcia for this study. We use this phylogeny to investigate the evolution of selected morphological traits and to infer the biogeographic history of the genus. Our results yield a highly supported phylogenetic tree where the Myrceugenia group is sister to the Myrcia and Plinia groups. Five Myrcia species previously considered unplaced emerge in a newly circumscribed clade. The monophyly of two Myrcia sections previously considered uncertain, Aulomyrcia and Gomidesia, are confirmed with strong support. Flowers with free calyx lobes, 2-locular ovaries, and anthers with symmetrical thecae are ancestral features of Myrcia. The Myrcia sect. Gomidesia is highly supported and recovered as monophyletic, with asymmetric anthers that retain their curvature after dehiscence as a morphological synapomorphy. The Atlantic Forest is the most likely ancestral area of the genus and most of its internal clades, from where multiple lineages colonized different regions of South and Central America, in particular the Brazilian Cerrado through multiple unidirectional range expansions. The southern Atlantic Forest is the ancestral area for Myrcia sect. Gomidesia , with lineages reaching the northern Atlantic Forest, Cerrado, Yungas, and other savanna vegetation of South America. Our results provide a solid backbone for further evolutionary and taxonomic work and clarify several previously uncertain relationships in this mega-diverse plant group, and shed light on its geographical range evolution. [ABSTRACT FROM AUTHOR]

Climatic and ecological factors can influence the parasite load of a host. Variation in rainfall, body size, and sex of the hosts may be related to the abundance of parasites. This study investigated the helminth fauna associated with a population of Norops brasiliensis, together with the effect of host biology (sex, body size, and mass) and variation in rainfall regime on the abundance of helminths. Species of three groups of endoparasites were found (Nematoda, Cestoda, and Trematoda), with nematodes as the most representative taxa with eight species, prevalence of 63.2 %, mean intensity of 4.0 ± 0.58 (1 – 25), and mean abundance of 2.66 ± 0.44 (0 – 25). Nine helminth species are new host records for N. brasiliensis. The nematode Rhabdias sp. had the highest prevalence (53.3 %). There was no significant relationship between abundance of the trematode Mesocoelium monas and host sex or season, although the abundance of this parasite increased significantly with host body size and mass, while abundance of nematodes was related to season and host mass. This study increases the knowledge about the diversity of helminth fauna associated with N. brasiliensis, revealing infection levels of hosts from northeastern Brazil. [ABSTRACT FROM AUTHOR]

Copyright of Revista Evidenciação Contábil & Finanças is the property of Revista Evidenciacao Contabil & Financas and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

The high diversity of Neotropical fishes has been attributed to major South American palaeogeographic events, such as Andean uplift, rise of the Isthmus of Panama and marine transgressions. However, the unavailability of temporal information about evolution and diversification of some fish groups prevents the establishment of robust hypotheses about correlations between species diversification and proposed palaeogeographical events. One example is the Anablepidae, a family of teleost fishes found mostly in coastal habitats of Central and South America, but also in some inner river basins of South America. Historical aspects of the distribution patterns of the Anablepidae were never analysed and no accurate estimation of time of its origin and diversification is presently available. A multi-gene analysis was performed to estimate Anablepidae phylogenetic position, age and biogeography, comprising seven nuclear genes. The suborder Cyprinodontoidei was recovered in three major clades, one comprising all the Old World Cyprinodontoidei and two comprising New World lineages. Anablepidae was recovered as the sister group of the New World Poeciliidae, with the Amazonian genus Fluviphylax as their sister group. The ages found for the origin and diversification of Cyprinodontiformes were congruent with the pattern recorded for other vertebrate groups, with an origin anterior to the Cretaceous-Paleogene (K-Pg) transition and diversification during the Paleogene. The age estimated for the split between the Atlantic and Pacific lineages of Anableps was congruent with the rise of Panamanian Isthmus. The results suggest Miocene marine transgressions as determinant to the current distribution of Jenynsia. [ABSTRACT FROM AUTHOR]

Background: Sloths of the species Bradypus variegatus are mammals with peculiar habits, which feed mostly young leaves of 'embaúba' and occur broadly in Central and South America. This specie has the greatest occurrence in Brazilian Northeast, making it a biological model for several researches in the fields as anatomy, physiology, genetics, pathology, histology and ecology, which provide data to literature in order to benefit maintenance and preservation of these animals. This study aimed to describe unpublished data about small and large intestine anatomy of the sloth Bradypus variegatus, in order to collaborate for knowledge of its digestive processes. Materials, Methods & Results: In order to perform this present research, 10 corpses of specie Bradypus variegatus belonged to the acquis of Anatomy Division, Department of Animal Morphology and Physiology (DMFA); Federal Rural University of Pernambuco (UFRPE), with 5 males and 5 females, the study was authorized by Animal Use and Experimentation Ethic Committee license (CEUA-UFRPE), n° 034/2015. All 10 animals used had natural death, were obtained through a donation of CETAS Tangará (Centro de Triagem de Animais Silvestres - Wildlife Screening Center), and located in the city of Recife. Animals were dissected at abdominal and pelvic portion, from a median sagittal incision, followed by lateral folding of skin, muscle and withdrawal of pubis portion for exposition and description of intestines, with analysis of syntopy and measurement of these organs. A relation was observed among external holes of urinary, reproductive and digestive systems. A relation was still observed among intestines and stomach, liver, kidneys, bladder and abdominal cavity wall. Some animals had absence of sigmoid colon, ventral and dorsal descendent colon. Regarding measurement, small intestine ranged from 147.09 to 163.59 cm for males and 117.44 to 151.28 cm for females, while large intestine varied between 39.68 and 43.35 cm for males, and 33.19 and 44.47 cm for females. Urinary and reproductive systems had a same external hole at perineal portion for both gender. Whereas digestive system ended at anus as occur commonly among mammals. Discussion: Among specimens described, most had the same anatomic profile regarding the intestinal portions and syntopy performed over other abdominal cavity organs. A difference was observed on liver size, increment of 20% for females and males sampled, excluding animals that had absence of structure that were minority, once 40% of females had no ventral descending colon, 20% of males and females had no sigmoid colon, and 20% of males had no dorsal descending colon. However, some animals that had absence demonstrated increase of other adjacent structures, for example, male that had no dorsal descending colon developed the largest sigmoid colon observed among animals measured for portions of duodenum, ventral descending colon, ascending colon and dorsal descending colon. Regarding the measurement of small and large intestine, Bradypus variegatus had differences compared to other herbivores, what suggests that this fact is associated to a restricted diet, in which that animal is submitted. Because of literature shortage about digestive system of specie Bradypus variegatus and other species of wild animals in general, it still difficult to infer or plot more accurate affirmations about this subject. [ABSTRACT FROM AUTHOR]

Aim The main goals were to assess the distributional concordance among taxa of the xeric clade of Pitcairnioideae (Bromeliaceae) to establish biogeographical units (i.e. endemic areas), and to use the results to identify conservation priorities. Location Geographical data were analysed between parallels −1° and −47° S and meridians 35°6′ and 80°1′ W, which includes the Andean region, the Chacoan subregion and the South American Transition Zone, and three global hotspots (Atlantic Forest, Cerrado and Tropical Andes). Methods Two methods were employed, parsimony analysis of endemicity ( PAE) and endemicity analysis ( EA), to search for the biogeographical congruence between endemic areas for 220 species. Two grid cell sizes (2° and 3°) and three criteria were employed to delimit the areas of endemism. Results The results of the PAE demonstrated eight candidate areas of endemism when applying a grid cell size of 2° and six areas of endemism with 3°. The EA optimization method, using a grid size of 2°, recovered six (consensus 75%) and four (consensus 5%) areas, and a size of 3° recovered eight (consensus 75%) and three (consensus 5%) areas. Based on consistent results of the three combined criteria and the congruence of areas of endemism, we delimited three biogeographical areas of endemism for the clade in the Chacoan subregion of South America. The following areas in Brazil were delimited: (1) south-eastern Minas Gerais, (2) north-eastern Minas Gerais, and (3) north-eastern Goiás. Main conclusions Endemic species with congruent occurrence patterns were identified to propose primary biogeographical homologies and to highlight areas that should be prioritized for conservation of species in the xeric clade of Pitcairnioideae. Furthermore, we suggest that evolutionary and historical processes (adaptive radiation; glacial and interglacial period in the Quaternary), as well as ecological factors, could have induced the high diversification rates for this clade in South America. [ABSTRACT FROM AUTHOR]

Invertebrates are harmed by pollution of their habitats. Litter-dwelling sedentary scorpions, such as Tityus pusillus , studied here, may be good models for examining the genotoxic effects of xenobiotics in soil. Thirty specimens were collected from five sites in Northeast Brazil with different levels of human disturbance, as well as a laboratory group. The comet assay was performed on hemolymph cell samples. Damage Index (DI) and Damage Frequency (DF%) were measured. Much higher genotoxicity was observed in animals collected in an area with human interference and solid waste, compared to those obtained in more pristine areas or the laboratory. T. pusillus may be a useful model for environmental genotoxicity assays. • For the first time, the comet assay was applied to animals in the Scorpiones order. • Human disturbance (such as garbage disposal) of habitats may be genotoxic to scorpions. • Tityus pusillus is a valuable species for ecology research in South America. [ABSTRACT FROM AUTHOR]

Internal fertilization is a widespread mode of reproduction in chondrichthyans and tetrapods, but uncommon in actinopterygian fishes. In killifishes of the suborder Aplocheiloidei, internal fertilization is restricted to two genera, Campellolebias and Cynopoecilus , both containing species adapted to life in seasonal pools of subtropical South America and exhibiting elaborated inseminating structures. Phylogenetic studies involving these genera are scarce and limited to morphological characters and fragments of mitochondrial DNA sequences available for a few taxa, providing incongruent results and thus impeding hypotheses on the evolution of insemination and related morphological traits. We analyzed three nuclear loci ( GLYT1 , ENC1 , Rho ) for 13 aplocheiloid taxa obtaining the first well-supported phylogeny for cynopoecilines, thus providing a significant background to interpret evolutionary changes within the group. Like in killifishes of the suborder Cyprinodontoidei, the evolution of internal fertilization in aplocheiloids is associated with deep changes in the structure of male anal fin. The phylogenetic analyses indicate that internal fertilization corresponds to a single evolutionary event during the evolution of aplocheiloid killifishes. The analyses also indicate that male specialized muscle characters, comprising a muscular ejaculatory pump in the urogenital region and hypertrophied inclinatores and depressores anales, arose in the ancestor of the clade comprising Campellolebias and Cynopoecilus . On the other hand, anal fin specialized structures including the male inseminating tube of Campellolebias and the male inseminating fan of Cynopoecilus evolved independently in each genus. [ABSTRACT FROM AUTHOR]

Abstract: Crotoxin (CTX), a neurotoxin isolated from the venom of the South American rattlesnake Crotalus durissus terrificus, induces analgesia. In this study, we evaluated the antinociceptive effect of CTX in a model of neuropathic pain induced by rat sciatic nerve transection. Hyperalgesia was detected 2 h after nerve transection and persisted for 64 days. Immersion of proximal and distal nerve stumps in CTX solution (0.01 mM for 10 s), immediately after nerve transection, blocked hyperalgesia. The antinociceptive effect of CTX was long-lasting, since it was detected 2 h after treatment and persisted for 64 days. CTX also delayed, but did not block, neurectomy-induced neuroma formation. The effect of CTX was blocked by zileuton (100 mg/kg, p.o.) and atropine (10 mg/kg, i.p.), and reduced by yohimbine (2 mg/kg, i.p.) and methysergide (5 mg/kg, i.p.). On the other hand, indomethacin (4 mg/kg, i.v.), naloxone (1 mg/kg, i.p.), and N-methyl atropine (30 mg/kg, i.p.) did not interfere with the effect of CTX. These results indicate that CTX induces a long-lasting antinociceptive effect in neuropathic pain, which is mediated by activation of central muscarinic receptors and partially, by activation of α-adrenoceptors and 5-HT receptors. Eicosanoids derived from the lipoxygenase pathway modulate the action of crotoxin. [Copyright &y& Elsevier]

Copyright of Brazilian Journal of Biology is the property of Instituto Internacional de Ecologia and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Faunal mortality from roadkill has a negative impact on global biodiversity, and bats are among the roadkilled animals. In South America, the Atlantic Forest covers southeastern Brazil, a region which sustains a large bat diversity. In this biome, the Sooretama reserves are crossed by the federal highway BR-101, one of the busiest in Brazil. We analyzed bats roadkilled along the 25 km stretch of highway that crosses the Sooretama reserves. Data were collected between the years 2010 and 2015. In total, 773 individuals distributed among 47 bat species were roadkilled during this period. The insectivorous feeding guild was the most affected, accounting for 25 species and 74% of the recorded roadkill, and those flying in the open area were the most frequently roadkilled (41.9%). Bat mortality rates did not differ between months of the year. However, the relation between rainy days and roadkill was negative. Monitoring by foot was more efficient than by car for detection of bat carcasses. Radars with a speed limit below 60 km/h reduced the rates of roadkill. The diversity of deceased bats found in this study represents 40% of the known species in the Atlantic Forest, and is the largest among current studies of species killed on highways globally. The present study raises concerns about the high diversity and abundance of roadkilled insectivorous bats and the conservation of these animals in the Neotropical region. [ABSTRACT FROM AUTHOR]

Simple Summary: The population's growing concern for health and the increased consumption of natural products have led to the study of the use of bioactive compounds in animal feed, especially those containing antioxidants. An example of this is yerba mate (Ilex paraguariensis), a plant highly consumed in South America due to its antioxidant properties, which benefit human health and can reduce the incidence of cardiovascular diseases. However, the effects of yerba mate on animal feed as well as the composition and preservation of meat products are unknown. Therefore, the objective of the current study was to evaluate the effects of the inclusion level of yerba mate extract in the lamb's diet on meat quality traits, antioxidant activity, and shelf-life. Our results showed that the use of the extract in lamb feed did not negatively affect the characteristics of lamb meat nor increase lipoperoxidation during a six-day storage period. The inclusion of 4% yerba mate extract (YME) resulted in a higher value in the yellow colour of the meat. The present study investigated the inclusion of yerba mate extract (YME) in the lamb's diet on meat quality traits, antioxidant activity, and shelf-life. Thirty–six lambs were distributed according to a block design with the following groups: control group without YME (0%) and three treatment groups with 1, 2, and 4% YME inclusion in the dry matter. The animals were fed these diets for 53 days. Samples were collected from the Longissimusthoracis (LT) muscle to analyze antioxidant activity and meat quality. Samples were placed on a counter display simulating a retail environment for 0, 3, and 6 days at 4 ± 2 °C. All data were analyzed using a MIXED model with orthogonal contrasts. Inclusion of 1 and 4% YME in the diet changed the yellow (b*) and the chroma (C*) of the meat (p ≤ 0.05). The pH, colour, thiobarbituric acid reactive substances, and carbonyl values were influenced by the retail display time for all the evaluated treatments (p ≤ 0.03). However, neither diet nor the retail display time influenced the oxidation of proteins or the antioxidant enzyme activities of catalase (CAT), superoxide dismutase (SOD), glutathione peroxidase (GPX) and glutathione activity (GSH) in meat. Therefore, the inclusion of 4% YME showed positive results in the yellow and colour stability parameters of the meat without increasing the lipid peroxidation values or altering the normal meat quality parameters in lambs. [ABSTRACT FROM AUTHOR]

• The Rhammatocerus brasiliensis mitogenome is similar to that of most insects. • The R. brasiliensis phylogenetic positioning supports the paraphily of Gomphocerinae. • R. brasiliensis is the oldest species of New World, with mitogenome characterized. • Gomphocerinae probably originated in South America. Acrididae family is characterized by diverse phylogenetic uncertainties, with different paraphyletic subfamilies. This study characterized the mitogenome of the grasshopper Rhammatocerus brasiliensis and determined its phylogenetic position in the family Acrididae. Sequencing was performed on an Illumina platform. The Short Oligonucleotide Analysis Package (SOAP) was used for genome assembly and the MITOS Web Server for annotation. Phylogenetic analysis was performed using mtDNA nucleic acid and protein sequences of R. brasiliensis and more 63 species belonging to 12 subfamilies of Acrididae. Phylogenetic trees were reconstructed using Bayesian inference with a relaxed molecular clock to estimate the speciation divergence time between taxa. The mitochondrial genome of R. brasiliensis has 15,571 bp of length, is rich in AT (72%), and contains 37 genes, including 13 protein-encoding genes, 22 genes encoding transfer RNA and two genes encoding ribosomal RNA. In addition, we also have annotated intergenic spacers and gene overlaps. The phylogenetic trees based on nucleic acid and amino acid sequences showed similar topologies. Phylogenetic analysis revealed that R. brasiliensis is grouped as an early offset of the Acrididae family. Phylogenetic analyses also corroborated the presence of several paraphyletic subfamilies in the family Acrididae including Gomphocerinae. The positioning of R. brasiliensis in the mtDNA phylogenetic tree further supports paraphyly of this subfamily. Moreover, the basal position of R. brasiliensis suggests that Gomphocerinae probably originated in South America. [ABSTRACT FROM AUTHOR]

Scientists have long been trying to understand why the Neotropical region holds the highest diversity of birds on Earth. Recently, there has been increased interest in morphological variation between and within species, and in how climate, topography, and anthropogenic pressures may explain and affect phenotypic variation. Because morphological data are not always available for many species at the local or regional scale, we are limited in our understanding of intra‐ and interspecies spatial morphological variation. Here, we present the ATLANTIC BIRD TRAITS, a data set that includes measurements of up to 44 morphological traits in 67,197 bird records from 2,790 populations distributed throughout the Atlantic forests of South America. This data set comprises information, compiled over two centuries (1820–2018), for 711 bird species, which represent 80% of all known bird diversity in the Atlantic Forest. Among the most commonly reported traits are sex (n = 65,717), age (n = 63,852), body mass (n = 58,768), flight molt presence (n = 44,941), molt presence (n = 44,847), body molt presence (n = 44,606), tail length (n = 43,005), reproductive stage (n = 42,588), bill length (n = 37,409), body length (n = 28,394), right wing length (n = 21,950), tarsus length (n = 20,342), and wing length (n = 18,071). The most frequently recorded species are Chiroxiphia caudata (n = 1,837), Turdus albicollis (n = 1,658), Trichothraupis melanops (n = 1,468), Turdus leucomelas (n = 1,436), and Basileuterus culicivorus (n = 1,384). The species recorded in the greatest number of sampling localities are Basileuterus culicivorus (n = 243), Trichothraupis melanops (n = 242), Chiroxiphia caudata (n = 210), Platyrinchus mystaceus (n = 208), and Turdus rufiventris (n = 191). ATLANTIC BIRD TRAITS (ABT) is the most comprehensive data set on measurements of bird morphological traits found in a biodiversity hotspot; it provides data for basic and applied research at multiple scales, from individual to community, and from the local to the macroecological perspectives. No copyright or proprietary restrictions are associated with the use of this data set. Please cite this data paper when the data are used in publications or teaching and educational activities. [ABSTRACT FROM AUTHOR]

The Atlantic Rainforest is one of the global conservation hotspots, representing a seriously threatened area with high levels of endemism and species richness. The fishes from the Atlantic Rainforest are one of the most exploited vertebrate groups by the international aquarium commerce, with an annual trade volume of about U$15-25 billions, now aggravated by the Internet e-Commerce and playing a crucial role on the sales and distribution of these species. The Cichlidae is one of the most exploited groups with several species being commonly sold in several online sites and aquarium stores all around the world. In this sense, our aim is to study the genetic diversity of the native cichlid Geophagus brasiliensis from the South American Atlantic Rainforest in Brazil. We constructed a database including 75 sequences from Geophagus brasiliensis from the Ubatiba river with 540 bp of the mtDNA D-loop region using primers H16498 and L15774M and conducted molecular analyses with Geneious v4.82, DnaSP v5, Arlequin v3.5 and PopART. Our results point show that although G. brasiliensis is considered as a territorialist species, which exhibits parental care and small movement rates, population genetic structure could not be observed along the sample area, suggesting the existence of considerable gene flow at least among the sampled populations. [ABSTRACT FROM AUTHOR]

Abstract: This work aimed to prove that Brazil, Argentina and Colombia, although share similar history, are different in a genetic point of view—by analysis of STR markers. Therefore the use of a genetic databank to South America must be seen with extra care. [Copyright &y& Elsevier]

Phyllomedusa azurea is a frog species well distributed geographically in South America, including Brazilian biomes as Pantanal and Cerrado. Compared with other anurans from the Phyllomedusinae family, there are few reports on the bioactive potential of skin-derived molecules from this species. In this perspective, the aim of the present study was to evaluate the in vitro antibacterial activity of skin secretion of P. azurea by detection of Minimum Inhibitory Concentration (MIC) of the growth of bacterial indicator strains and to determine if occurs a changing in the bacterial cell envelope permeability. The MIC determination was carried out by the microdilution plate method. The absorbance was measured and analyzed statistically using the t-test to compare two groups (0.05% of significance). The impact of the crude extract on cell envelope permeability of Staphylococcus aureus ATCC 25923 was conducted by the crystal violet assay, and the absorbance was measured spectrophotometry followed by the calculation of the crystal violet uptake percentage. The specific MIC for S. aureus ATCC 25923 and Escherichia coli ATCC 25922 was 31.25 µg/mL, while for Bacillus subtilis ATCC 6633 was 125 µg/mL and Pseudomonas aeruginosa ATCC 27853 was 250 µg/mL. The treatment with crescent concentrations of frog skin secretion increased the crystal violet uptake by S. aureus ATCC 25923 cells, suggesting an action on the cell plasma membrane. The results demonstrated that the skin secretion of P. azurea presents antibacterial activity and merit further investigations to characterize the bioactive molecules. [ABSTRACT FROM AUTHOR]

The article discusses a study of Mycetophilidae from Colombia to unveil possible neotropical, circum-antarctic and nearctic overlaps. The report studies specimens collected from Colombia between 2000- 2004. Several genera which show characteristics found in Central and South America have overlaps with nearctic and neotropical elements and those with circum-antartic distribution. According to the article, more studies are needed on the species and phylogeny of the Mycetophilidae fauna to explain the biogeographic history of northern South America.

Magellanic penguins, Spheniscus magellanicus , are the most abundant penguins living in temperate regions of South America and are good indicators of environmental pollution in the region. Persistent organic pollutants (POPs) were detected in the liver of Magellanic penguins found debilitated or dead on the beaches of Brazil (states of Rio de Janeiro, Sao Paulo, Santa Catarina and Rio Grande do Sul) between 2008 and 2012 as well as in Uruguay and Chile in 2011. Polychlorinated biphenyls (PCBs) were more prevalent than organochlorine pesticides (DDTs ∼ HCB ∼ Drins) and polybrominated diphenyl ethers (PBDEs). Among PCBs, penta-, hexa- and hepta-chlorinated congeners were predominant. Concentrations of POPs were similar between the Pacific and Atlantic penguin populations, except for PCBs, which were relatively higher in the Pacific population. During the study years (2008–2012), large variations were found in organochlorine pesticides and PCBs tended to decline. Overall, the southern portion of South America has low concentrations of POPs, with either a constant trend or evidence of decline. [ABSTRACT FROM AUTHOR]

Running a cost-effective human blood transfusion supply chain challenges decision makers in blood services world-wide. In this paper, we develop a Markov decision process with the objective of minimising the overall costs of internal and external collections, storing, producing and disposing of blood bags, whilst explicitly considering the probability that a donated blog bag will perish before demanded. The model finds an optimal policy to collect additional bags based on the number of bags in stock rather than using information about the age of the oldest item. Using data from the literature, we validate our model and carry out a case study based on data from a large blood supplier in South America. The study helped achieve an overall increase of 4.5% in blood donations in one year. [ABSTRACT FROM AUTHOR]