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Increased habitat diversity is often predicted to promote the diversity of animal communities because a greater variety of habitats increases the opportunities for species to specialize on different resources and coexist. Although positive correlations between the diversities of habitat and associated animals are often observed, the underlying mechanisms are only now starting to emerge, and none have been tested specifically in the marine environment. Scieractinian corals constitute the primary habitat-forming organisms on coral reefs and, as such, play an important role in structuring associated reef fish communities. Using the same field experimental design in two geographic localities differing in regional fish species composition, we tested the effects of coral species richness and composition on the diversity, abundance, and structure of the local fish community. Richness of coral species overall had a positive effect on fish species richness but had no effect on total fish abundance or evenness. At both localities, certain individual coral species supported similar levels of fish diversity and abundance as the high coral richness treatments, suggesting that particular coral species are disproportionately important in promoting high local fish diversity. Furthermore, in both localities, different microhabitats (coral species) supported very different fish communities, indicating that most reef fish species distinguish habitat at the level of coral species. Fish communities colonizing treatments of higher coral species richness represented a combination of those inhabiting the constituent coral species. These findings suggest that mechanisms underlying habitat-animal interaction in the terrestrial environment also apply to marine systems and highlight the importance of coral diversity to local fish diversity. The loss of particular key cOral species is likely to have a disproportionate impact on the biodiversity of associated fish communities. [ABSTRACT FROM AUTHOR]

Recent studies have suggested that corallivorous fishes may be vectors for coral disease, but the extent to which fishes actually feed on and thereby potentially transmit coral pathogens is largely unknown. For this study, in situ video observations were used to assess the level to which fishes fed on diseased coral tissues at Lizard Island, northern Great Barrier Reef. Surveys conducted at multiple locations around Lizard Island revealed that coral disease prevalence, especially of brown band disease (BrB), was higher in lagoon and backreef locations than in exposed reef crests. Accordingly, video cameras were deployed in lagoon and backreef habitats to record feeding by fishes during 1-h periods on diseased sections of each of 44 different coral colonies. Twenty-five species from five fish families (Blennidae, Chaetodontidae, Gobiidae, Labridae and Pomacentridae) were observed to feed on infected coral tissues of staghorn species of Acropora that were naturally infected with black band disease (BBD) or brown band disease (BrB). Collectively, these fishes took an average of 18.6 (±5.6 SE) and 14.3 (±6.1 SE) bites per hour from BBD and BrB lesions, respectively. More than 40% (408/948 bites) and nearly 25% (314/1319 bites) of bites were observed on lesions associated with BBD and BrB, respectively, despite these bands each representing only about 1% of the substratum available. Moreover, many corallivorous fishes ( Labrichthys unilineatus, Chaetodon aureofasciatus, C. baronessa, C. lunulatus, C. trifascialis, Cheiloprion labiatus) selectively targeted disease lesions over adjacent healthy coral tissues. These findings highlight the important role that reef fishes may play in the dynamics of coral diseases, either as vectors for the spread of coral disease or in reducing coral disease progression through intensive and selective consumption of diseased coral tissues. [ABSTRACT FROM AUTHOR]

Spatial distributions of coral reef fish species are potentially determined by habitat preferences and behavioural interactions. However, the relative importance of these factors and whether or not behavioural interactions reinforce or disrupt habitat associations are poorly understood. This paper explores the degree to which habitat and social preferences explain the association that three common coral reef cardinalfish species ( Zoramia leptacanthus, Archamia zosterophora and Cheilodipterus quinquelineatus; family Apogonidae) have with coral substrata at Lizard Island, Great Barrier Reef. At diurnal resting sites, species were strongly associated with branching corals, with 80-90% of each species inhabiting one branching coral species, Porites cylindrica. Species were also highly gregarious, forming large con-specific and hetero-specific aggregations in coral heads, potentially reinforcing habitat associations. Three-way choice experiments were conducted to test fishes habitat preferences for living coral over dead substrata, for particular coral species, and the influence of gregarious behaviour on these habitat choices. The strength of habitat preferences differed among species, with Z. leptacanthus preferring live coral and P. cylindrica, A. zosterophora preferring P. cylindrica, whether live or dead and C. quinquelineatus exhibiting no preferences. All species were attracted to conspecifics, and for C. quinquelineatus and A. zosterophora, conspecific attraction resulted in stronger preferences for live corals. Gregarious behaviour also increased C. quinquelineatus associations with P. cylindrica. The relative strength of social attraction versus habitat preferences was investigated by comparing fish habitat preferences in the presence and/or absence of conspecifics. The presence of conspecifics on non-preferred rubble habitat reduced each species association with live coral. This study's results indicate that in the field, habitat preferences and conspecific attraction combine to reinforce the association between cardinalfishes and a narrow range of coral substrata. [ABSTRACT FROM AUTHOR]

Temporal variance in species abundance, a potential driver of extinction, is linked to mean abundance through Taylor's power law, the empirical observation of a linear log-log relationship with a slope between 1 and 2 for most species. Here we test the idea that the slope of Taylor's power law can vary both among species and spatially as a function of habitat area and isolation. We used the world's most extensive database of coral reef fish communities comprising a 15-year series of fish abundances on 43 reefs of Australia's Great Barrier Reef. Greater temporal variances were observed at small and isolated reefs, and lower variances at large and connected ones. The combination of reef area and isolation was associated with an even greater effect on temporal variances, indicating strong empirical support for the idea that populations on small and isolated reefs will succumb more frequently to local extinction via higher temporal variability, resulting in lower resilience at the community level. Based on these relationships, we constructed a regional predictive map of the dynamic fragility of coral reef fish assemblages on the Great Barrier Reef. [ABSTRACT FROM AUTHOR]

The potential for environmental and physiological modification of elemental incorporation in otoliths is significant and must be validated before otoliths can be used reliably to estimate water parameters over the life history of a fish. We experimentally manipulated temperature and diet quantity for juvenile, sub-adult, and adult Acanthochromis polyacanthus, a tropical damselfish of the SW Pacific. Significant interactive effects between life history stage, temperature and food quantity were observed for otolith Ba/Ca, while significant interactions between stage and food were observed for Sr/Ca. Specific growth rates were negatively correlated with D and D for juveniles and sub-adults. These interactions indicated elemental incorporation dynamics varied depending on the life history stage, suggesting variation in effects of stage-specific metabolism or reproductive status. Our results highlight complex responses of elemental incorporation to both endogenous and exogenous factors. Interpretations of life history transects across otoliths must account for these effects to avoid confounding environmental variability with ontogenetic changes in physiology. [ABSTRACT FROM AUTHOR]

The response of species to global warming depends on how different populations are affected by increasing temperature throughout the species' geographic range. Local adaptation to thermal gradients could cause populations in different parts of the range to respond differently. In aquatic systems, keeping pace with increased oxygen demand is the key parameter affecting species' response to higher temperatures. Therefore, respiratory performance is expected to vary between populations at different latitudes because they experience different thermal environments. We tested for geographical variation in respiratory performance of tropical marine fishes by comparing thermal effects on resting and maximum rates of oxygen uptake for six species of coral reef fish at two locations on the Great Barrier Reef (GBR), Australia. The two locations, Heron Island and Lizard Island, are separated by approximately 1200 km along a latitudinal gradient. We found strong counter-gradient variation in aerobic scope between locations in four species from two families (Pomacentridae and Apogonidae). High-latitude populations (Heron Island, southern GBR) performed significantly better than low-latitude populations (Lizard Island, northern GBR) at temperatures up to 5°C above average summer surface-water temperature. The other two species showed no difference in aerobic scope between locations. Latitudinal variation in aerobic scope was primarily driven by up to 80% higher maximum rates of oxygen uptake in the higher latitude populations. Our findings suggest that compensatory mechanisms in high-latitude populations enhance their performance at extreme temperatures, and consequently, that high-latitude populations of reef fishes will be less impacted by ocean warming than will low-latitude populations. [ABSTRACT FROM AUTHOR]

The article discusses a study which investigates the effects of temperature and ocean acidification on the aerobic scope of the cardinalfish species, Ostorhinchus doederleini and Ostorhinchus cyanosoma, from the Great Barrier Reef in Queensland. In this study, respirometry is applied to find out these effects on the cardinalfish species and resting and maximum rate of dioxide consumption are measured for each of these species. Results show that ocean acidification will limit low latitude locations and levels of atmospheric carbon dioxide will affect the success of tropical marine fishes.

Aim To determine whether the diversity of resident and transient coral-dwelling fish responds differentially to gradients in regional species richness. Location Three regions in the Indo-Pacific (Red Sea, western Indian Ocean, Great Barrier Reef) which contain increasingly larger regional diversities of reef fish. Methods I surveyed fish residing within branching coral species. Fish species were a priori categorized as resident or transient based on the degree of affiliation between the fish and live coral. To compare among regions that differ in coral diversity I used a modified species–volume relationship (SVR). Each point in the SVR represents the total number of fish species, resident or transient, found within the cumulative volume of a specific coral species. Empirical SVRs were further compared with random-placement null models. Results For transient species, I found that the observed SVRs did not differ consistently from those expected from random samples drawn from the corresponding regional species pools. In addition, for a given volume of coral, more fish species were found in richer regions, indicating strong regional influences on local diversity. In contrast, resident richness was lower than that expected from random samples of the species pool, and richness in rich regions was reduced comparably more than in poor regions. The SVRs of resident species were similar among regions with different regional diversities. Main conclusion These results suggest that, within coral species, transient fish richness is mostly influenced by stochastic allocation of species from the regional pool. Conversely, richness of resident species within a coral species is limited, making it independent of regional diversity. Since higher regional diversity of resident fish was not accompanied by higher richness per coral species or by decreased niche breadth, higher regional diversity of resident fish species must be rooted in higher coral richness. Consequently, ecological interactions between functional groups (coral and fish) can be powerful drivers of regional biodiversity. [ABSTRACT FROM AUTHOR]

The capacity for marine fishes to perform aerobically (aerobic scope) is predicted to control their thermal tolerance and, thus, the impact that rapid climate change will have on their populations. We tested the effect of increased water temperatures on the resting and maximum rates of oxygen consumption in five common coral reef fishes at Lizard Island on the northern Great Barrier Reef, Australia. All species exhibited a decline in aerobic capacity at elevated water temperatures (31, 32 or 33 °C) compared with controls (29 °C); however, the response was much stronger in two cardinalfishes, Ostorhinchus cyanosoma and O. doederleini, compared with three damselfishes, Dascyllus anuarus, Chromis atripectoralis and Acanthochromis polyacanthus. Aerobic scope of the two cardinalfishes was reduced by nearly half at 31 °C compared with 29 °C, and virtually all capacity for additional oxygen uptake was exhausted by 33 °C. In contrast, the three damselfishes retained over half their aerobic scope at 33 °C. Such differences in thermal tolerance between species, and possibly families, suggest that the community structure of reef fish assemblages might change significantly as ocean temperatures increase. Populations of thermally tolerant species are likely to persist at higher temperatures, but populations of thermally sensitive species could decline on low-latitude reefs if individual performance falls below levels needed to sustain viable populations. [ABSTRACT FROM AUTHOR]

Aim We examined comparative data for cryptobenthic reef fishes to determine how variation in regional species richness relates to local species richness, abundance, and taxonomic and trophic composition, and to test whether systems with higher species richness exhibit finer habitat partitioning. Locations Lizard Island, Great Barrier Reef (GBR), Australia; Bahía de Loreto, Gulf of California (GoC), Mexico. Methods Cryptobenthic reef fish assemblages from four habitats (coral heads, rubble, and horizontal and vertical surfaces of boulders) were collected using clove oil. Differences in density, species richness and biomass were examined between regions and among habitats. Habitat associations were identified for each habitat/location based on multivariate ordination, and the statistical significance of patterns was tested using analysis of similarity (ANOSIM). In addition, the trophic group composition of the assemblages for both regions was examined. Results A total of 91 species in 20 families were recorded (GBR, 66 species; GoC, 25 species). Total and habitat species richness were higher on the GBR, whereas biomass was higher in the GoC. No difference in fish density between regions was found. Habitat division among assemblages was greater in the depauperate GoC. Only coral head associations proved to be distinctive on the GBR, whereas three sample groups were found in the GoC (coral heads, horizontal boulders and vertical boulders/rubble). Trophic composition in the two regions was markedly different, with omnivores dominating the GBR fauna and planktivores the GoC. Main conclusions A positive regional–local relationship in fish diversity was found between regions, but fish abundance in both regions remained similar. Contrary to expectations, habitat partitioning, at a community level, was greater in the depauperate GoC. Differences in trophic composition and patterns of habitat use appear to reflect the disparate history of the regions, whereas patterns of abundance may reflect the influence of fundamental relationships between size and abundance in communities. This study highlights the potential of reef faunas to conform to universal numerical trends while maintaining an ability to respond ecologically to local/evolutionary influences. The GoC fauna appears to be exceptionally vulnerable to natural and anthropogenic disturbance owing to the high numerical dominance of habitat-specific species and to the limited potential for functional redundancy within the system. [ABSTRACT FROM AUTHOR]

Habitat perturbations play a major role in shaping community structure; however, the elements of disturbance-related habitat change that affect diversity are not always apparent. This study examined the effects of habitat disturbances on species richness of coral reef fish assemblages using annual surveys of habitat and 210 fish species from 10 reefs on the Great Barrier Reef (GBR). Over a period of 11 years, major disturbances, including localised outbreaks of crown-of-thorns sea star (Acanthaster planci), severe storms or coral bleaching, resulted in coral decline of 46-96% in all the 10 reefs. Despite declines in coral cover, structural complexity of the reef framework was retained on five and species richness of coral reef fishes maintained on nine of the disturbed reefs. Extensive loss of coral resulted in localised declines of highly specialised coral-dependent species, but this loss of diversity was more than compensated for by increases in the number of species that feed on the epilithic algal matrix (EAM). A unimodal relationship between areal coral cover and species richness indicated species richness was greatest at approximately 20% coral cover declining by 3-4 species (6-8% of average richness) at higher and lower coral cover. Results revealed that declines in coral cover on reefs may have limited short-term impact on the diversity of coral reef fishes, though there may be fundamental changes in the community structure of fishes. [ABSTRACT FROM AUTHOR]

Gnathiids are common isopod crustaceans that feed on blood and plasma from a wide range of reef fishes. Although parasitic gnathiid isopods are active during both day and night on the Great Barrier Reef, little is known about their behaviour and ecology due to difficulty with species identification. Information about nocturnal gnathiids is especially lacking because of logistical constraints. This study shows that a gnathiid species captured at night, Gnathia falcipenis, has a larger eye diameter than that of a taxonomically undescribed sympatric diurnal species, Gnathia sp. A. When tested in a phototaxis experiment with this diurnal species, G. falcipenis moved towards a light source at much lower levels of light intensity than the diurnal species. Their willingness to feed in lab tests with live host fish was also strongly linked to light conditions. This gnathiid appears to have visual adaptations that have evolved for foraging under very low light levels, and is probably completely nocturnal. These results are discussed with reference to the availability of different host fishes during the day and night, the risk of predation that gnathiids may encounter during these periods, and the possibility of an unappreciated diversity of gnathiid taxa that may have a range of foraging strategies. [ABSTRACT FROM AUTHOR]

The bioerosive potential of the intertidal chiton Acanthopleura gemmata on One Tree Reef was determined by quantification of CaCO3 in daily faecal pellet production of individuals transplanted into mesocosms after nocturnal-feeding forays. Mean bioerosive potential was estimated at 0.16 kg CaCO3 chiton-1 yr-1. Bioerosion rates were estimated for populations on two distinct chiton habitats, reef margin (0.013 kg CaCO3 m-2 yr-1) and beachrock platform (0.25 kg CaCO3 m-2 yr-1). Chiton density on the platform was orders of magnitude greater than on the reef margin. The surface-lowering rate (0.16 mm m-2 yr) due to bioerosion by the beachrock population is a substantial contribution to the total surface-lowering rate of 2 mm m-2 yr-1 previously reported for One Tree Reef across all erosive agents. At high densities, the contribution of A. gemmata to coral reef bioerosion budgets may be comparable to other important bioeroders such as echinoids and fish. [ABSTRACT FROM AUTHOR]

Juvenile and adult reef fishes often undergo migration, ontogenic habitat shifts, and nocturnal foraging movements. The orientation cues used for these behaviours are largely unknown. In this study, the use of sound as an orientation cue guiding the nocturnal movements of adult and juvenile reef fishes at Lizard Island, Great Barrier Reef was examined. The first experiment compared the movements of fishes to small patch reefs where reef noise was broadcast, with those to silent reefs. No significant responses were found in the 79 adults that were collected, but the 166 juveniles collected showed an increased diversity each morning on the reefs with broadcast noise, and significantly greater numbers of juveniles from three taxa (Apogonidae, Gobiidae and Pinguipedidae) were collected from reefs with broadcast noise. The second experiment compared the movement of adult and juvenile fishes to reefs broadcasting high (>570 Hz), or low (<570 Hz) frequency reef noise, or to silent reefs. Of the 122 adults collected, the highest diversity was seen at the low frequency reefs; and adults from two families (Gobiidae and Blenniidae) preferred these reefs. A similar trend was observed in the 372 juveniles collected, with higher diversity at the reefs with low frequency noises. This preference was seen in the juvenile apogonids; however, juvenile gobiids were attracted to both high and low sound treatments equally, and juvenile stage Acanthuridae preferred the high frequency noises. This evidence that juvenile and adult reef fishes orientate with respect to the soundscape raises important issues for management, conservation and the protection of sound cues used in natural behaviour. [ABSTRACT FROM AUTHOR]

This study compared the catch composition, catch per unit effort, and incidental impacts of spearfishers and linefishers engaged in a structured fishing program whereby fishing effort was standardized across time, space and skill level. It was found that (1) the catch composition of both groups of fishers overlapped considerably, (2) the numbers of target fish caught by spearfishers (156) and linefishers (168) were not significantly different, (3) the mean size of target fish caught by spearfishers (1.95 ± 0.1 kg, ±SE) was significantly larger than the mean size of target fish caught by linefishers (1.27 ± 0.06 kg), and (4) spear-fishers retained 43% more biomass of target species than did linefishers (304 versus 213 kg, respectively). However, linefishers used ∼1 kg of bait for every 3 kg of target fish that were captured. Linefishers also caught far more undersized, undesirable, or protected fishes (i.e., bycatch) and caused far more pollution (i.e., lost gear) than did spearfishers. It is concluded that the overall impacts of recreational spearfishing and linefishing on fishery resources of the Great Barrier Reef are broadly equivalent (per unit of fishing effort), and that management regulations should be applied equitably across both fishing sectors. A management strategy of this type will simplify enforcement of fisheries regulations and avoid discrimination of particular fishers in local communities where both fishing methods are socially or culturally important. [ABSTRACT FROM AUTHOR]

Background: Management strategies for coral reefs are dependant on information about the spatial population structure and connectivity of reef organisms. Genetic tools can reveal important information about population structure, however, this information is lacking for many reef species. We used a mitochondrial molecular marker to examine the population genetic structure and the potential for metapopulation dynamics in a direct developing coral reef fish using 283 individuals from 15 reefs on the Great Barrier Reef, Australia. We employed a hierarchical sampling design to test genetic models of population structure at multiple geographical scales including among regions, among shelf position and reefs within regions. Predictions from island, isolation-by-distance and meta-population models, including the potential for asymmetric migration, local extinction and patterns of re-colonisation were examined. Results: Acanthochromis polyacanthus displayed strong genetic structure among regions (ΦST = 0.81, P < 0.0001) that supported an equilibrium isolation-by-distance model (r = 0.77, P = 0.001). Significant structuring across the continental shelf was only evident in the northern region (ΦST = 0.31, P < 0.001) and no evidence of isolation-by-distance was found within any region. Pairwise ΦST values indicated overall strong but variable genetic structure (mean ΦST among reefs within regions = 0.28, 0.38, 0.41), and asymmetric migration rates among reefs with low genetic structure. Genetic differentiation among younger reefs was greater than among older reefs supporting a meta-population propagule-pool colonisation model. Variation in genetic diversities, demographic expansion and population growth estimates indicated more frequent genetic bottlenecks/founder effects and subsequent population expansion in the central and southern regions compared to the northern one. Conclusion: Our findings provide genetic evidence for meta-population dynamics in a direct developing coral reef fish and we reject the equilibrium island and isolation-by distance models at local spatial scales. Instead, strong non-equilibrium genetic structure appears to be generated by genetic bottlenecks/founder effects associated with population reductions/extinctions and asymmetric migration/(re)-colonisation of such populations. These meta-population dynamics varied across the geographical range examined with edge populations exhibiting lower genetic diversities and higher rates of population expansion than more central populations. Therefore, coral reef species may experience local population reductions/extinctions that promote overall meta-population genetic differentiation. [ABSTRACT FROM AUTHOR]

The redhead goby Paragobiodon echinocephalus lives exclusively within the branching coral Stylophora pistillata. While in the Great Barrier Reef fish occupation rate of large coral is higher than that of small coral, an opposite pattern exists in the northern Red Sea. It is suggested that this pattern is caused by a limitation on the adult body size of fish in the northern Red Sea. [ABSTRACT FROM AUTHOR]

The effects of territorial damselfish on coral reef benthos have been well-studied for a few relatively large-bodied species with visually distinct territories. Despite a growing body of research demonstrating their abundance, and their effects on algae, corals and other grazers, there has been little research on the effects of the territorial damselfish community as a whole. This study investigated the space occupation, territory composition, and diet of ten damselfish species at three locations: Magnetic and Orpheus Islands (Great Barrier Reef), and Kimbe Bay (Papua New Guinea). Territories were measured, and the composition of benthic communities inside and outside territories was assessed both in situ and from algal collections. The stomach contents of territorial damselfishes were also quantified. Although the larger, previously well-studied species had the most visible effect on the benthic community in their territories, all the smaller species also significantly affected the algal composition, normally with an increase of palatable algae. However, the composition of algal assemblages inside the territories of different species varied considerably. Damselfish territories were highly individual, not just among species, but also among locations. Diets were diverse and indicated a greater degree of omnivory and detritivory than previously thought. At all locations, territories occupied a substantial proportion of the substratum: >25% on Magnetic Island, >50% at Orpheus Island, and ~50% in Kimbe Bay. Within individual zones, this figure was as high as 70%. The contribution of territorial damselfishes to a range of benthic patterns and processes is considerable, and future benthic studies may need to distinguish more closely between territory and non-territory areas. [ABSTRACT FROM AUTHOR]

Few studies have examined the relative functional impacts of individual herbivorous fish species on coral reef ecosystem processes in the Indo-Pacific. This study assessed the potential grazing impact of individual species within an inshore herbivorous reef fish assemblage on the central Great Barrier Reef (GBR), by determining which fish species were able to remove particular macroalgal species. Transplanted multiple-choice algal assays and remote stationary underwater digital video cameras were used to quantify the impact of local herbivorous reef fish species on 12 species of macroalgae. Macroalgal removal by the fishes was rapid. Within 3 h of exposure to herbivorous reef fishes there was significant evidence of intense grazing. After 12 h of exposure, 10 of the 12 macroalgal species had decreased to less than 15% of their original mass. Chlorodesmis fastigiata (Chlorophyta) and Galaxaura sp. (Rhodophyta) showed significantly less susceptibility to herbivorous reef fish grazing than all other macroalgae, even after 24 h exposure. Six herbivorous and/or nominally herbivorous reef fish species were identified as the dominant grazers of macroalgae: Siganus doliatus, Siganus canaliculatus, Chlorurus microrhinos, Hipposcarus longiceps, Scarus rivulatus and Pomacanthus sexstriatus. The siganid S. doliatus fed heavily on Hypnea sp., while S. canaliculatus fed intensively on Sargassum sp. Variation in macroalgal susceptibility was not clearly correlated with morphological and/or chemical defenses that have been previously suggested as deterrents against herbivory. Nevertheless, the results stress the potential importance of individual herbivorous reef fish species in removing macroalgae from coral reefs. [ABSTRACT FROM AUTHOR]

Gnathiid isopods are one of the most abundant groups of ectoparasites on coral reef fishes. They, and other isopods, have been shown to significantly affect the health and behaviour of many reef fish. Whether isopod emergence differs among habitats on coral reefs is not known. In this study, we measured emergence rates of parasitic isopods (Gnathiidea and Flabellifera) in six habitats at two sites at Lizard Island during new moon periods in March and December 2004. Isopods were collected from the periphery and centres of micro-reefs, patch reefs, continuous reefs, and from inter-reefal habitats (sand or rubble) with 1 m2 emergence traps. Sites (Casuarina and Coconut Beach) were located on opposite sides of Lizard Island. Live gnathiids were collected with light traps in November 2005 to investigate species differences between sites. At both sites, the most abundant gnathiid species was exclusive to that site. More gnathiid larvae emerged at night, and emergence of fed gnathiids (pranizae) and flabelliferan isopods was almost exclusively nocturnal. Diurnal emergence was greater at Coconut Beach than Casuarina Beach. Although emergence counts were not consistently affected by parameters such as habitat, site, or sampling period, gnathiid size and feeding state were. Where significant differences existed, gnathiids were larger and more often fed over reef borders than centrally. We suggest first stage larvae (Z1) have the largest influence on total abundance and are patchily distributed in accordance with adults from which they have recently hatched. As later stage larvae depend on fish, more successful (fed) and older larvae are found on the edges of reefs where appropriate hosts may be more abundant, or predation is lower. Gnathiids were over-dispersed in all habitats investigated, including apparently homogeneous beds of coral rubble and sand. This indicates that their distributions may be better predicted by very fine scale differences in substrate or that aggregations are the result of gregariousness and may be difficult to predict on the basis of substrate. Emergence traps collected comparatively few parasitic flabelliferan isopods. This community differed greatly from the previously described community of scavenging isopods at Lizard Island. These differences are probably the result of differences in trapping methodology. [ABSTRACT FROM AUTHOR]

Abstract: We assess the use of otolith weight to predict population age structure of an important harvested coral reef fish at different temporal scales up to 4 years, and explore the implications of age prediction for estimates of key fishery parameters. Fish age and otolith weight relationships were estimated for common coral trout, Plectropomus leopardus (Serranidae: Epinephelinae), at 24 coral reefs located in four different regions spanning 7° of latitude along the Great Barrier Reef of Australia from 1995 to 1999. We explored the robustness of predictions of population age structures from otolith weights where age structure in 1 year was derived from otolith weights using the age–otolith weight relationships derived in another year up to 4 years earlier. The accuracy of predictions of age structure varied depending upon the temporal scale over which the prediction was made. Predictive accuracy was highest for predictions in the same year as the age–otolith weight relationship was derived and worst at the longest scale, when predictions spanned 4 years. Predictions of age based on the age–otolith weight relationships generally overestimated the minimum age of a population and underestimated the maximum age. Mean predicted age was generally within ±1% difference of the mean observed age while mean predicted length at modal age (growth index) was largely within ±5% difference of mean observed length at modal age. Predicted age structures gave less accurate estimates of total mortality rate than those estimated from directly determined age structures. Fish age–otolith weight relationships generally predicted modal age within ±1 year at all temporal scales. These results have significance for making rapid, initial estimates of key parameters for long-term monitoring of tropical reef fish stocks, especially in circumstances where available resources are insufficient for a comprehensive program of direct age estimation. [Copyright &y& Elsevier]

The reproductive biology of coral trout, Plectropomus leopardus, from the Great Barrier Reef (Australia) was investigated by correlating gonadal condition with plasma levels of gonadal steroids. Female Wsh were found to be regressed from mid-summer to early spring, after which rapid and cyclical increases in gonado-somatic index (IG), maximum oocyte diameter (MOD) and plasma concentrations of estradiol-17β and testosterone were detected. Male fish, in contrast, commenced recrudescence slightly earlier in winter and responded with less dramatic increases in both IG and plasma concentrations of testosterone and 11-ketotestosterone. The mode of oocyte development was multiple group-synchronous, and cyclical fluctuations in reproductive parameters (IG, MOD and gonadal steroid concentrations) were synchronized with new-moon lunar phases. It is likely, therefore, that individual P. leopardus have the capacity to spawn on multiple occasions, with lunar periodicity. However, evidence suggests that early bouts of reproduction may be more important in terms of reproductive investment than subsequent bouts later in the same season. It is concluded that patterns of gametogenesis and steroidogenesis in P. leopardus are similar to the patterns displayed by other tropical groupers, suggesting that management regimes and propagation protocols developed for these fishes may also be appropriate for use with P. leopardus. [ABSTRACT FROM AUTHOR]

We investigated spatial patterns of synchrony among coral reef fish populations and environmental variables over an eight-year period on the Great Barrier Reef, Australia. Our aims were to determine the spatial scale of intra- and interspecific synchrony of fluctuations in abundance of nine damselfish species (genus Pomacentrus) and assess whether environmental factors could have influenced population synchrony. All species showed intraspecific synchrony among populations on reefs separated by ≤100 km, and interspecific synchrony was also common at this scale. At greater spatial scales, only four species showed intraspecific synchrony, over distances ranging from 100–300 km to 500–800 km, and no cases of interspecific synchrony were recorded. The two mechanisms most likely to cause population synchrony are dispersal and environmental forcing through regionally correlated climate (the Moran effect). Dispersal may have influenced population synchrony over distances up to 100 km as this is the expected spatial range for ecologically significant reef fish dispersal. Environmental factors are also likely to have synchronized population fluctuations via the Moran effect for three reasons: (1) dispersal could not have caused interspecific synchrony that was common over distances ≤100 km because dispersal cannot link populations of different species, (2) variations in both sea surface temperature and wind speed were synchronized over greater spatial scales (>800 km) than fluctuations in damselfish abundance (≤800 kin) and were correlated with an index of global climate variability, the El Niño-Southern Oscillation (ENSO), and (3) synchronous population fluctuations of most damselfish species were correlated with ENSO; large population increases often followed ENSO events. We recorded regional variations in the strength of population synchrony that we suspect are due to spatial differences in geophysical, oceanographic, and population characteristics, which act to dilute or enhance the effects of synchronizing mechanisms. We conclude that synchrony is common among Pomacentrus populations separated by tens of kilometers but less prevalent at greater spatial scales, and that environmental variation linked to global climate is likely to be a driving force behind damselfish population synchrony at all spatial scales on the Great Barrier Reef. [ABSTRACT FROM AUTHOR]

1. Environmentally induced maternal effects are known to affect offspring phenotype, and as a result, the dynamics and evolution of populations across a wide range of taxa. 2. In a field experiment, we manipulated maternal condition by altering food availability, a key factor influencing maternal energy allocation to offspring. We then examined how maternal condition at the time of gametogenesis affects the relationships among early life-history traits and survivorship during early development of the coral reef fish Pomacentrus amboinensis. 3. Maternal condition did not affect the number of embryos that hatched or the number of hatchlings surviving to a set time. 4. We found no significant difference in egg size in relation to the maternal physiological state. However, eggs spawned by supplemented mothers were provisioned with greater energy reserves (yolk-sac and oil globule size) than nonsupplemented counterparts, suggesting that provision of energy reserves rather than egg size more closely reflected the maternal environment. 5. Among offspring originating from supplemented mothers, those with larger yolk-sacs were more likely to successfully hatch and survive for longer periods after hatching. However, among offspring from nonsupplemented mothers, yolk-sac size was either inconsequential to survival or offspring with smaller yolk-sac sizes were favoured. Mothers appear to influence the physiological capacity of their progeny and in turn the efficiency of individual offspring to utilize endogenous reserves. 6. In summary, our results show that the maternal environment influences the relationship between offspring characteristics and survival and suggest that energy-driven selective mechanisms may operate to determine progeny viability. [ABSTRACT FROM AUTHOR]

This study documented temporal variation in the abundance of butterflyfishes (Chaetodontidae) at Trunk Reef, on the central Great Barrier Reef, Australia, from May 2000 to March 2005. During this period, live coral cover declined by >90%, mostly due to severe coral bleaching. There were no short-term changes (within 4 months) in the abundance of butterflyfishes following initial declines in live coral cover. Surveys conducted in 2005, however, revealed significant declines in the abundance of Chaetodon baronessa, Chaetodon lunulatus, Chaetodon trifascialis, Chaetodon plebeius and Chaetodon rainfordi, all of which are obligate hard-coral feeders. In contrast, there was no significant change in the abundance of Chaetodon auriga, Chaetodon aureofasciatus, Chaetodon citrinellus, Chaetodon melannotus or Chaetodon vagabundus, which are much less reliant on scleractinian coral for food. Clearly, extensive coral depletion, such as that caused by severe coral bleaching, can have a major effect on the abundance of butterflyfishes. Specific responses of butterflyfishes varied according to their reliance on hard corals for food and their ability to utilize alternate prey types. [ABSTRACT FROM AUTHOR]

Pelagic larval duration (PLD) is a commonly used proxy for dispersal potential in coral reef fishes. Here we examine the relationship between PLD, genetic structure and genetic variability in geographically widespread and ecological generalist species from one coral reef fish family (Pomacentridae) that differs in mean larval duration by more than a month. The genetic structure was estimated in eight species using a mitochondrial molecular marker (D-loop) and in a sub-set of five species using nuclear molecular markers (ISSRs). Estimates of genetic differentiation were similar among species with pelagic larvae, but differed between molecular markers. The mtDNA indicated no structure in all species except one, while the ISSR indicated some structure between the sampling locations in all species. We detected a relationship between PLD and genetic structure using both markers. These relationships, however, were caused by a single species, Acanthochromis polyacanthus, which differs from all the other species examined here in lacking a larval phase. With this species excluded, there was no relationship between PLD and genetic structure using either marker despite a range of PLDs of more than 20 days. Genetic diversities were generally high in all species and did not differ significantly among species and locations. Nucleotide diversity and total heterozygosity were negatively related to maximum PLD but again these relationships were caused by A. polyacanthus and disappeared when this species was excluded. These genetic patterns are consistent with moderate gene flow among well-connected locations and indicate that at this phylogenetic level (i.e., within family) the duration of the pelagic larval phase is unrelated to the patterns of genetic differentiation. [ABSTRACT FROM AUTHOR]

Hybrid zones are natural laboratories offering insights into speciation processes. Narrow hybrid zones are less common in the sea than on land consistent with higher dispersal among marine populations. Acanthochromis polyacanthus is an unusual bony marine fish with philopatric dispersal that exists as allopatric stocks of white, bicoloured and black fish on the Great Barrier Reef (GBR). At two latitudes, different morphs coexist and hybridize at narrow contact zones. Sequence data from mitochondrial Hypervariable Region 1 revealed contrasting patterns of introgression across these zones. At the northern hybrid zone, a single clade of mitochondrial haplotypes was found in all white fish, hybrids and tens of kilometres into pure bicoloured stock. At the southern hybrid zone, there was no introgression of mitochondrial genes into black fish and hybrids shared the bicoloured haplotypes. Based on this asymmetry, we postulate that black fish from the southern GBR have experienced a selective sweep of their mitochondrial genome, which has resulted in almost total reproductive isolation. [ABSTRACT FROM AUTHOR]

We evaluated the spatial and temporal scales over which otolith signatures varied in a reef fish on the Great Barrier Reef (GBR) using the non-dispersing damselfish Acanthochromis polyacanthus. We found a robust multi-element separation in otolith signatures from reef clusters in the northern and southern GBR. Variance components indicated that this spatial scale accounted for the majority of the variation in two elemental ratios (Ba/Ca and Sr/Ca) over the 2 years of the study. There was also significant variation in elemental signatures between otoliths collected over two consecutive years, as well as within a season. Individual reefs within clusters were less distinguishable based on otolith chemistry and were probably observed by differences within reefs (among sites and broods within sites). These results indicate that it may be difficult to determine the reef of origin for individual fish using otolith chemistry, while determining natal region seems a realistic goal. [ABSTRACT FROM AUTHOR]

At Heron Island reef, Great Barrier Reef Australia, biomass densities and mean wet mass of Ward's damselfish Pomacentrus wardi and the jewelled blenny Salarias fasciatus were not significantly different at 2·37 v. 2·95 g m−2 and 8·7 v. 7·9 g, respectively. Whereas S. fasciatus significantly exceeded P. wardi in (1) total number of bites per day (3427 v. 1155), (2) the mass of epilithic algal community consumed per bite (2·19 v. 0·14 mg) and (3) total organic carbon consumed per day (487·31 v. 35·46 mg C m−2 day−1). Territorial behaviour differed also between the two species. Pomacentrus wardi chased from their territories a smaller proportion of blennies than roving grazers ( i.e. scarids, acanthurids, siganids and pomacentrids) relative to S. fasciatus. Salarias fasciatus chased c. 90% of other blennies from their territories, while chasing only c. 20% of all damsels that entered. Both P. wardi and S. fasciatus rarely chased non-grazers. The chasing behaviour of S. fasciatus was size dependent, with resident fish chasing only individuals of its own family ( i.e. Blenniidae) that were the same or smaller size. Pomacentrus wardi may have tolerated S. fasciatus grazing within its territory, as it contributes to territory defence from other blennies. The possibility that the interaction between the two species is facilitative, rather than competitive, is discussed. It was concluded that salariine blennies play an important, and previously underestimated role in coral reef trophodynamics. [ABSTRACT FROM AUTHOR]

Evidence for competitive lotteries among reef fishes has remained elusive despite this being the group of organisms for which the lottery model was first developed. I used a combination Of laboratory and field experiments to test the mechanisms of co-existence between two closely related species of coral-dwelling goby, Gobiodon histrio and G. erythrospilus, that occur in similar abundance at Lizard Island on the Great Barrier Reef These two species exhibited similar patterns of habitat use and nearly identical ability to compete for vacant corals. Furthermore, there was a priority effect where the first species to occupy a vacant coral excluded an interspecific intruder of similar body size. The relative abundance of recruit and juvenile G. histrio and G. erythrospilus in the field matched the relative abundance of adults, as expected where there is no post-recruitment displacement by a competitive hierarchy. Finally, a reciprocal competitor-reduction experiment confirmed that G. histrio and G. erythrospilus compete for vacant space, with the removal of either, species leading to an increase in the abundance of the other species. Therefore. these two species are nearly ecologically equivalent and appear to coexist by means of a competitive lottery for vacant space. [ABSTRACT FROM AUTHOR]

Here I investigate whether patterns of scarid biomass across the continental shelf of the northern Great Barrier Reef can be explained by species associating with particular characteristics of the reef environment. Despite the widely documented tendency of scarids to graze and browse over exposed calcareous reef surfaces, scarid biomass was not significantly correlated with the availability of feeding substrata for any species investigated. Indeed positive correlations between biomass and substrata variables were rare for the 18 species investigated, indicating that biomass in these taxa was not strongly reliant on the availability of preferred substrata quantified at the spatial scale of sites (1620 m2). Rather, species specific biomass was commonly highly variable between sites, suggesting that local aggregation of scarids commonly occurs at this scale. Such spatial patchiness potentially reflects the effects of spatially variable recruitment, fishes associating with unmeasured habitat characteristics or aggregating prior to spawning. Despite variability in the biomass of individual species between replicate sites within exposure regimes, exposure was generally a far more reliable predictor of biomass than the other variables quantified. This study provides little evidence to indicate that adult scarids have strict habitat requirements, rather they appear to be habitat generalists whose biomass is strongly influenced by exposure but weakly related to the cover of particular reef substratum. [ABSTRACT FROM AUTHOR]

Presents a study that investigated the demographic basis of differences in the size structure of coral reef fishes in the Great Barrier Reef in Queensland. Spatial analysis of the demographic patterns of Chlorurus sordidus and Scarus frenatus; Differences in the growth profile of the reef fishes; Assessment of the age structure of the reef fishes.

Reports on the diel patterns of abundance of presettlement reef fishes and pelagic larvae at One Tree Island, Great Barrier Reef in Queensland. Mean abundance of preflexion and postflexion reef fish at three times of sampling during day and night; Vertical distributions of presettlement fish; Patterns of settlement on patch reefs in One Tree Island Lagoon.