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Otariid gammaherpesvirus 1 (OtGHV1) is associated with high rates of urogenital carcinoma in free-ranging California sea lions (Zalophus californianus; CSL), and until recently was reported only in the Northern Hemisphere. The objective of this study was to survey free-ranging South American sea lions (Otaria byronia; SASL) and South American fur seals (Arctocephalus australis: SAFS) in Punta San Juan, Peru for OtGHV1 and to determine prevalence characteristics. Twenty-one percent (14/67) of urogenital swabs collected over three years (2011, 2014, 2015) from live pinnipeds of both species tested positive with a pan-herpesvirus conventional PCR. Sequencing of SAFS amplicons revealed 100% homology to OtGHV1 at the DNA polymerase, glycoprotein B, and viral bcl2-like genes. Sequencing of SASL amplicons revealed a novel related virus, herein called Otariid gammaherpesvirus 8 (OtGHV8). For comparison of sample sites, urogenital, conjunctival, and oropharyngeal swabs collected from 136 live pinnipeds of both species at Punta San Juan between 2011–2018 were then assayed using quantitative PCR for a segment of the OtGHV1/8 DNA polymerase gene using a qPCR assay now determined to cross-react between the two viruses. In total, across both species, 38.6% (51/132) of urogenital swabs, 5.6% (4/71) of conjunctival swabs, and 1.1% (1/90) of oropharyngeal swabs were positive for OtGHV1/8, with SASL only positive on urogenital swabs. Results from SASL were complicated by the finding of OtGHV8, necessitating further study to determine prevalence of OtGHV1 versus OtGHV8 using an alternate assay. Results from SAFS suggest a potential relationship between OtGHV1 in SAFS and CSL. Though necropsy surveillance in SAFS is very limited, geographic patterns of OtGHV1-associated urogenital carcinoma in CSL and the tendency of herpesviruses to cause more detrimental disease in aberrant hosts suggests that it is possible that SAFS may be the definitive host of OtGHV1, which gives further insight into the diversity and phyogeography of this clade of related gammaherpesviruses. [ABSTRACT FROM AUTHOR]

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Determining trophic habits of predator communities is essential to measure interspecific interactions and response to environmental fluctuations. South American fur seals, Arctocephalus australis (SAFS) and sea lions Otaria byronia (SASL), coexist along the coasts of Peru. Recently, ocean warming events (2014–2017) that can decrease and impoverish prey biomass have occurred in the Peruvian Humboldt Current System. In this context, our aim was to assess the effect of warming events on long-term inter- and intra-specific niche segregation. We collected whisker from SAFS (55 females and 21 males) and SASL (14 females and 22 males) in Punta San Juan, Peru. We used δ13C and δ15N values serially archived in otariid whiskers to construct a monthly time series for 2005–2019. From the same period we used sea level anomaly records to determine shifts in the predominant oceanographic conditions using a change point analysis. Ellipse areas (SIBER) estimated niche width of species-sex groups and their overlap. We detected a shift in the environmental conditions marking two distinct periods (P1: January 2005—October 2013; P2: November 2013—December 2019). Reduction in δ15N in all groups during P2 suggests impoverished baseline values with bottom-up effects, a shift towards consuming lower trophic level prey, or both. Reduced overlap between all groups in P2 lends support of a more redundant assemblage during the colder P1 to a more trophically segregated assemblage during warmer P2. SASL females show the largest variation in response to the warming scenario (P2), reducing both ellipse area and δ15N mean values. Plasticity to adapt to changing environments and feeding on a more available food source without fishing pressure can be more advantageous for female SASL, albeit temporary trophic bottom-up effects. This helps explain larger population size of SASL in Peru, in contrast to the smaller and declining SAFS population. [ABSTRACT FROM AUTHOR]

The undesirable presence of plastic wastes in the marine environment is well known. Reports of effects of plastic wastes on inland continental species are very rare. This report concerns the use of plastic waste by the white-naped squirrel (Simosciurus nebouxii) in agricultural areas of northern Peru. Among the residues observed, single-use plastic bags were prominent. The proximity of solid waste accumulations to all the nests probably may explain why such debris was chosen, except that other nests nearby did not contain plastics. Future studies are recommended to understand the consequences for terrestrial continental fauna of using such materials. [ABSTRACT FROM AUTHOR]

Arias-Schreiber (2003) found that 20% of SAFS and 32% of SASL samples contained cephalopod beaks, whereas in our study cephalopod consumption was significantly different between otariids, with 32% in SAFS in comparison with 1.6% in SASL. Trophic overlap was detected in the austral summer and fall of 2015 during an extraordinary El Niño event, in which both otariids consumed similar proportions of Peruvian anchovy (55% SAFS, 48.6% SASL), cephalopods (21.7% SAFS, 13.6% SASL) and red squat lobsters (9% SAFS, 2% SASL). Keywords: diet; foraging ecology; fur seal; Peru; sea lion EN diet foraging ecology fur seal Peru sea lion 775 790 16 05/13/22 20220601 NES 220601 Abstract Resource partitioning can contribute to species coexistence by reducing interspecific competition. In regard to crustaceans, Arias-Schreiber (2003) found 8% of SAFS and 60% of SASL samples contained red squat lobster, similar to the 5% and 70% for SAFS and SASL, respectively, found in our study. [Extracted from the article]

This study investigates the trophic interactions and As and Cd transfer along seven marine ecosystems in Peru. Five of these ecosystems are driven by aquaculture of the Peruvian scallop Argopecten purpuratus. A southward increased gradient of δ15N was observed among the three examined regions along the Peruvian coast. The stable isotope analysis in R (SIAR)‐stable isotope mixing models helped to clarify the feeding ecology of A. purpuratus and its important predators (e.g., Bursa ventricosa, Romaleon setosum). The food items of A. purpuratus can be ranked in decreasing order of importance: seston > sediment > particulate organic matter (POM) > brackish‐and‐fresh water POM input, while A. purpuratus itself was found to be the main prey item for predators. The highest trophic magnification factors (TMFs) were 1.46 and 1.07 for As and Cd, respectively, and were both found at the location in front of the Illescas Reserve Zone (northern Peru). Metal biomagnification and non‐biomagnification effects were found in the Peruvian marine food webs, but A. purpuratus always fitted the trophic metal magnification or bio‐dilution regression model as intermediate consumer and/or prey. The TMFs and linear metal relationships implied that As contamination is a serious concern in marine ecosystems in Peru. [ABSTRACT FROM AUTHOR]

Marine debris, in particular plastic debris and debris related to fishing activities, have an impact on marine mammals and seabirds. In marine-coastal species such as otariids, we can detect the incidence of these interactions through land-based observations. In this study, we recorded and described interactions between marine debris and the otariids Arctocephalus australis and Otaria byronia in a natural protected area in Peru, according to age class categories. Between 2016 and 2020, we recorded 151 animals that were directly impacted and/or were observed interacting with marine debris. Residual collars from fishing gear, ropes, plastic bags and unidentified material were recorded. Direct interactions with debris at colonies (e.g., plastic bags) were also recorded, as well as animals evidenced interacting with hooks. The age class category and species with the highest number of individuals impacted by residual collars were adult female A. australis and subadult male O. byronia. Single-use plastics were the most commonly bitten/moved waste by animals in the reserve. In the case of hooks, these were mostly lodged in the mouths of otariids. Our results highlight the importance of continuing to promote segregation at source, as well as the correct disposal of waste, locally and globally, to mitigate impacts on marine fauna. [Display omitted] • Between 2016 and 2020, 151 animals were recorded impacting or interacting with marine debris. • Residual collars belonged to materials associated with fishing activities, single-use plastics, ropes and unknown materials. • Single-use plastics such as plastic bags were the most commonly chewed or moved debris. • Hooks were mostly lodged in the animals' snouts. [ABSTRACT FROM AUTHOR]

Sympatric species evolve mechanisms to avoid competition and coexist. In the Humboldt Current System (HCS), populations of South American sea lions (SASL, Otaria byronia) and South American fur seals (SAFS, Arctocephalus australis) fluctuate mostly due to ENSO events and prey availability. We evaluate population trajectories of Peruvian sympatric otariids and discuss mechanisms for competition and/or resource limitation. For this purpose, we analyzed population trajectories of SASL and SAFS in a sympatric breeding site in Punta San Juan, Peru between 2001 and 2019. Wavelet analysis was used to extract trends and derivatives to estimate rates and turning points. Age-class proportions and biomass times series were constructed from weekly counts and evaluated. Both populations show a growth phase and subsequent decline. SAFS started to decline ~2.25 years before and at a rate 1.5 times faster than SASL. Decrease in juvenile age-class suggests that resource limitation is the main contributing factor for current population decline. [Display omitted] • Limitations in population growth of Peruvian sympatric otariid populations. • Sea lions are the current 'dominating' otariid species in Peru. • Decrease in juveniles contributes towards population decline. • Resource partitioning between otariids needs to be further explored in Humboldt Current System. [ABSTRACT FROM AUTHOR]

Repeated reports of microplastic pollution in the marine pinniped diet have emerged in the last years. However, only few studies address the drivers of microplastics presence and the potential implications for monitoring microplastic pollution in the ocean. This study monitored their in the scats (N = 205) of four pinniped species/subspecies at five different locations in the southern Pacific Ocean (Peru and Chile). Samples from all rookeries contained microplastics, and overall, 68% of the examined scats contained fragments/fibers, mostly blue colored. We confirmed that 81.5% of the fragments/fibers were anthropogenic in origin , but only 30% were polymers. Scats from Juan Fernández Archipelago presented higher microplastic concentrations than continental rookeries. Also, the common diet in each location may influence the levels found in the samples. This study presents a useful non-invasive technique to track plastic pollution in top predator diets as bioindicators for future surveillance/management plans applied to different location. Unlabelled Image • Blue microfiber are the most abundant microplastics in otariids diet along Perú and Chile coastline. • Of the anthropogenic origin confirmed fragments/fibers (81.5 %), 51.5% was Cotton and 30% as polymers. • Home range and type of prey (crustacean or fish) on otariid species may explain most of the microplastic levels differences. [ABSTRACT FROM AUTHOR]

Summary: Peru has the second-highest diversity of birds in the world, but little is known about the interactions between birds and plastic waste. To fill this knowledge gap, we searched the scientific literature, collected information from social networks such as Facebook and databases such as Macaulay Library and iNaturalist and solicited records through messaging with researchers and bird enthusiasts. We found 119 bird interactions with plastic debris involving 39 species from 20 families, with the red-legged cormorant Phalacrocorax gaimardi and the neotropical cormorant Phalacrocorax brasilianus being the most affected species. By type of interaction category, plastic waste in nests was the most abundant, followed by entanglement, capture and handling and ingestion. Ropes, nets and soft plastics such as bags were the most frequently reported types of waste. As our methodology has limitations, it is probable that other species that also interact with plastic waste have not been reported, so we recommend further study. [ABSTRACT FROM AUTHOR]

The Humboldt Current System presents high interannual variability, influenced by the El Niño Southern Oscillation (ENSO), whose implications in wildlife are not fully understood. We studied the isotopic niche of wild Humboldt penguins at Punta San Juan (Peru) during the pre-moult foraging trip in 4 consecutive years (2008–2011) under known oceanographic (ENSO) conditions. Our results show that there is a clear isotopic niche segregation (on both δ13C and δ15N values) of wild Humboldt penguins among all years. Besides isotopic niche segregation, niche width also varied significantly among years. The larger isotopic niche displayed in 2008 reflected the opportunistic feeding behaviour of Humboldt penguins when oceanographic conditions were unfavourable (i.e. El Niño of strong intensity). In contrast, and despite strong segregation, penguins displayed a more specialist behaviour in years of mild environmental conditions (i.e. 2009 "warm-weak", 2010 "neutral" and 2011 "warm-moderate"). No evidence of sexual segregation in wild Humboldt penguins during the pre-moulting foraging trip was found. This study highlights the coping mechanisms of an endangered species to changes in environmental conditions (i.e. overall, from strong to neutral El Niño events), which should have important ramifications in the management of the marine ecosystem in Peru, particularly the one related to the anchovy industry. • Strong inter-annual isotopic niche segregation in pre-moulting wild Humboldt Penguins. • Significant variation in the isotopic niche width among years. • No sexual segregation during the pre-moult foraging trip. [ABSTRACT FROM AUTHOR]

The Humboldt penguin ( Spheniscus humboldti ) population at the Punta San Juan Marine Protected Area in Peru is considered critical to the long-term sustainability of this endangered species in Peru. Exposure of the rookery to environmental toxicants is a mounting concern because of regional growth of industries and human populations. Whole blood samples were collected from 30 free-ranging penguins in 2011 as part of a broader population health monitoring program. Dried blood spots (DBS) containing 50 µl of blood were prepared and analyzed to assess exposure to five groups of environmental contaminants. Concentrations of elements arsenic, cadmium, iron, lead, mercury, selenium, and thallium were analyzed using inductively coupled plasma mass spectrometry. Persistent organic pollutant concentrations were measured using gas chromatography-tandem mass spectrometry to analyze organochlorine pesticides (OCP; p,p'-DDT, p,p'-DDE, β-hexachlorocyclohexane, t-nonachlor, and oxychlordane), polychlorinated biphenyls (congeners 138 and 153), and polybrominated flame retardants (polybrominated biphenyl-153 and polybrominated diphenyl ether congeners 47 and 99). Per- and polyfluoroalkyl substances, including perfluorooctane sulfonate (PFOS) and perfluorooctanoic acid were measured using liquid chromatography-tandem mass spectrometry. Results revealed low levels of exposure to these selected contaminants, at levels not considered to be of concern for wildlife health. DBS methodology was considered effective in a field-based setting for quantification of whole blood concentrations of environmental contaminants in penguins.

South American sea lions (Otaria byronia) and Peruvian fur seals (Arctocephalus australis) are sympatric species inhabiting the coastal Peruvian marine ecosystem. Declining abundance has prompted population health monitoring programs, including temporal monitoring of blood parameters. Several methods exist to determine total leukocyte count, yet no studies have evaluated agreement between methods in pinnipeds. We assessed agreement between total leukocyte counts determined by blood film estimate, Leuko-TIC, HemoCue, and UNOPETTE methods by using archival results from pinnipeds at Punta San Juan, Peru. Blood film estimates were prospectively performed, and resulting data were compared with retrospective leukocyte counts obtained from both species between 2009 and 2019 by using the other methodologies. Agreement in hematologic counts between methods was evaluated using Passing-Bablok regression and Bland-Altman plots (α=0.05). In total, 295 individuals (201 A. australis and 94 O. byronia) were included in the analysis. The blood film estimate method resulted in the highest leukocyte values (P<0.0001). Leuko-TIC counts were significantly higher than HemoCue counts (P<0.0001). Constant and proportional error was present in the agreement between the blood film estimate method and the other methods. Given the variation demonstrated between the different methodologies, additional research is needed to further evaluate agreement between these methodologies. The results underscore the importance of maintaining consistency in leukocyte count methodology for monitoring trends in population health over time. Method consistency may be the more important clinical consideration for assessing changes in leucocyte count over time and avoiding apparent changes depending on the methodology used., (© Wildlife Disease Association 2023.)

Infections with herpesvirus have contributed to respiratory, enteric, and neurological disease reports in avian species worldwide. Herpesviruses have been detected in penguin species before but have not been studied extensively. To better understand the impact of these viruses in free-living populations, an initial retrospective survey was performed on a wild population of Humboldt penguins ( Spheniscus humboldti ) in the Punta San Juan Marine Protected Area, Peru (15°22'S, 75°12'W) using tracheal swabs collected from 28 penguins in 2016 and 34 penguins in 2018. DNA extracted from these swabs was analyzed using a consensus herpesviral PCR assay targeting the DNA polymerase gene, and positive samples were sequenced. A single sample from 2016 was positive for spheniscid alpha-herpesvirus-1 (SpAHV-1), establishing an overall sample prevalence of 1.6% (95% CI: 0-8.6%). The positive animal was an adult male that did not show any clinical signs of herpesviral infection and was otherwise healthy based on physical exam and laboratory findings. This is the first detection of a herpesvirus in penguins at Punta San Juan, Peru, and the first step toward characterizing the implications of SpAHV-1 for Humboldt penguins. This investigation highlights the importance of continual disease surveillance in wild populations over time to monitor for changes that may impact long-term population viability.

Ocular disease in pinnipeds under human care is well described, and intraocular pressure (IOP) can be impacted by a variety of ophthalmic conditions. Species-specific reference parameters from clinically normal animals are instrumental for understanding how ophthalmic diseases may impact ocular pressures. IOP measurements were obtained using rebound tonometry from free-ranging Peruvian fur seals ( Arctocephalus australis unnamed subspecies) at Punta San Juan, Peru, over a 6-yr period (2010-2016). Retrospective data obtained from 108 (81 adults and 27 neonates comprising 69 females and 39 males) anesthetized fur seals with normal anterior segment ophthalmic examinations was included in the analysis. Differences in IOP from each eye were compared to categorical variables (age, year, sex, restraint) using an independent-samples t test. All univariate results with a significance of P < 0.05 were included in multivariate analysis. Of the 13 general linear models evaluated, the top two for both the right and the left eye included age class when all variables were evaluated simultaneously. Neonates had significantly lower IOP values than adults in both the right eye (17.5 mm Hg; 95% confidence interval [CI]: 14.0-21.1 mm Hg compared to 33.5 mm Hg; 95% CI: 31.0-36.1 mm Hg, respectively) and the left eye (18.4 mm Hg; 95% CI: 14.4-22.5 mm Hg compared to 32.3 mm Hg; 95% CI: 29.3-35.3 mm Hg, respectively). Anesthesia method was not statistically significant ( P > 0.05). This is the first report of normal IOP measurements for any fur seal species. Described data can be used to improve diagnosis and management of ocular alterations in pinnipeds.

Free-ranging Humboldt penguin (HP, Spheniscus humboldti) populations are under pressure from resource competition with industrial fisheries, habitat loss, and El Niño Southern Oscillation events. Foraging patterns for this top marine predator change during periods of aberrant oceanographic conditions and scarce fish stock numbers. These radical dietary fluctuations can lead to poor fertility, early embryonic death, poor hatchability, suppressed immune function, high chick mortality, and illness. To understand the variability of nutrient status in reproductive seasons, we measured select circulating nutrient concentrations (fat-soluble vitamins A, D, E, and carotenoids, fatty acids, amino acids, minerals, and electrolytes) of 105 HP at Punta San Juan, Peru during the first reproductive seasons of 2007 and 2008. We determined significant differences in nutrient status between sexes, years of sampling, and reproductive stages. Males (4.5 ± 0.38 kg) weighed more than females (4.0 ± 0.29 kg) and exhibited higher concentrations of vitamin A (0.71 ± 0.11 vs. 0.61 ± 0.12 µg/ml) and docosahexaenoic acid (6.70 ± 1.61 vs. 5.65 ± 1.59%). Males also displayed lower concentrations of β-carotene (0.01 ± 0.01 vs. 0.012 ± 0.001 µg/ml) and phosphorus (3.43 ± 0.83 vs. 4.40 ± 1.66 mg/dl). Comparison between the 2 years showed most circulating amino acid concentrations were higher in 2007. Significant differences in circulating amino acids and vitamins were also noted between different reproductive stages. These results demonstrate concentrations of nutrients can vary due to the physiological state of the animal, as well as the overall dynamics of their marine ecosystem habitat., (© 2020 Wiley Periodicals, Inc.)

Whole blood, serum, and feather samples from 29 Humboldt Penguins ( Spheniscus humboldti) at the Punta San Juan Marine Protected Area, Peru, were analyzed for 55 toxic and essential elements by using inductively coupled plasma mass spectrometry. Mercury (Hg) was analyzed by cold vapor atomic fluorescence. Maximum Hg concentrations in serum (0.0056 mg/g), whole blood (0.297 mg/kg), and feathers (1.8 mg/kg dry weight) were at levels generally not considered to cause health impairment. Of the elements analyzed, only eight (aluminum, calcium, iron, Hg, potassium, magnesium, sodium, and zinc) were detected in serum. These elements, plus selenium and titanium, were also quantifiable in whole blood. Feather analysis detected quantifiable values for the elements found in serum, plus arsenic, boron, barium, copper, manganese, and titanium. Results indicate this important breeding population of endangered penguins did not appear to be exposed to environmental elemental contaminants at levels detrimental to health and reproductive success. However, identification of measurable concentrations of toxic elements at low levels underscores the need for continued environmental monitoring, particularly in the face of expanding regional human populations and industrial growth. These results provide important reference data for temporospatial monitoring of this and other penguin populations.

The tissues and parasites collected from Peruvian fur seals (Arctocephalus australis) and South American sea lions (Otaria byronia) found dead at Punta San Juan, Peru were examined. The respiratory mite, Orthohalarachne attenuata infected 3 out of 32 examined fur seals and 3 out of 8 examined sea lions, however caused moderate to severe lymphohistiocytic pharyngitis only in fur seals. Hookworms, Uncinaria sp, infected 6 of the 32 examined fur seals causing variable degrees of hemorrhagic and eosinophilic enteritis. This parasite caused the death of 2 of these pups. In fur seals and sea lions, Corynosoma australe and Contracaecum osculatum were not associated with significant tissue alterations in the intestine and stomach respectively. Respiratory mites and hookworms have the potential to cause disease and mortality among fur seals, while parasitic infections do not impact significatively the health of sea lions at Punta San Juan, Peru.

The Peruvian population of the South American fur seal ( Arctocephalus australis ) is a distinct evolutionarily significant unit that is endangered. One of the largest rookeries for this species in Peru is located within the Punta San Juan marine protected area (15°22'S, 75°12'W). To better understand the current health status of this population, exposure to 10 pinniped pathogens was evaluated in adult female fur seals (n=29) via serology and polymerase chain reaction (PCR) techniques in November 2010. The results suggest this population is naïve to canine and phocine distemper viruses (serum neutralization test), five Leptospira interrogans serovars (microscopic agglutination test), and Brucella canis (card test). Indirect fluorescent antibody testing for Toxoplasma gondii , Neospora caninum , and Sarcocystis neurona was also uniformly negative. PCR testing of nasal swabs using previously described Mycoplasma spp. primers was positive in 37.9% (11/29) of samples. One animal was positive via card test for Brucella abortus , whereas 53.7% (15/28) were positive or suspect using a marine Brucella competitive enzyme-linked immunosorbent assay. Antibody to phocine herpesvirus-1 (PHV-1) was identified in 85.7% (24/28) of the sampled population by serum neutralization testing. Overall, exposure to Mycoplasma spp., Brucella spp., and PHV-1 was observed, but results demonstrated low to no exposure to many key pinniped pathogens. The expansion of human populations, agriculture, and industry along the Peruvian coast may lead to increased pathogen exposure from human, domestic, and wild animal sources. The naïve nature of this key population of South American fur seals raises concerns about potential risk for disease outbreaks.