Search

Malignant rhabdoid tumor (MRT) is a highly malignant and often lethal childhood cancer. MRTs are genetically defined by bi-allelic inactivating mutations in SMARCB1, a member of the BRG1/BRM-associated factors (BAF) chromatin remodeling complex. Mutations in BAF complex members are common in human cancer, yet their contribution to tumorigenesis remains in many cases poorly understood. Here, we study derailed regulatory landscapes as a consequence of SMARCB1 loss in the context of MRT. Our multi-omics approach on patient-derived MRT organoids reveals a dramatic reshaping of the regulatory landscape upon SMARCB1 reconstitution. Chromosome conformation capture experiments subsequently reveal patient-specific looping of distal enhancer regions with the promoter of the MYC oncogene. This intertumoral heterogeneity in MYC enhancer utilization is also present in patient MRT tissues as shown by combined single-cell RNA-seq and ATAC-seq. We show that loss of SMARCB1 activates patient-specific epigenetic reprogramming underlying MRT tumorigenesis. The regulatory landscape of malignant rhabdoid tumor (MRT) due to SMARCB1 loss remains to be explored. Here, the authors perform multi-omics analysis using patient-derived MRT organoids and characterise the epigenetic reprogramming events underlying SMARCB1 loss. [ABSTRACT FROM AUTHOR]

Copyright of Journal of Soil Sciences & Agricultural Engineering is the property of Egyptian National Agricultural Library (ENAL) and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

We are living in the 'plasticene' era. Marine plastic pollution is a global problem, and increasing effort and funds are being invested towards identifying and implementing solutions. It is well accepted that the implemented solutions should take into account local specificities and culture, which requires the involvement and engagement of local decision-makers and key actors. This paper presents how the DeCyDe-4 method, which is based on a participatory decision-support concept, was implemented to develop community-based policy tools and action plans to combat marine litter. Through a presentation of the step-by-step implementation of the method at a 3-day workshop in the Paphos District of Cyprus, the DeCyDe-4 method is unfolded so as to showcase how a multi-disciplinary group of local stakeholders can co-create a Policy Tool, and identify and prioritize measures and solutions to marine litter. The case study shows that DeCyDe-4 can support a varied group of stakeholders to negotiate a complex environmental problem such as marine litter, and to make informed, unbiased decisions, through a process that encourages active participation and dialogue, so that opposite opinions are heard, consensus is reached and ownership of the solutions is achieved. [ABSTRACT FROM AUTHOR]

A succession of Ce3+ and Tb3+ co-doped BaF2 nanoparticles were synthesized by co-precipitation and hydrothermal methods. The structure, morphology, elemental composition and photoluminescence characteristics of the doped samples were studied by X-ray diffractometry (XRD), transmission electron microscopy (TEM), X-ray energy spectrometry (EDX), photoluminescence emission spectroscopy (PL) and photoluminescence excitation spectroscopy (PLE). The phosphor has a cubic structure. According to the energy level relationship between Ce3+ and Tb3+, the energy transfer mechanism of Ce3+ and Tb3+ co-doped BaF2 samples was analyzed. Ce3+, Tb3+ co-doped BaF2 shows a strong green emission, and its fluorescence emission intensity is about 9 times higher than that of Tb3+ single doped BaF2. The energy transfer efficiency from Ce3+ to Tb3+ was calculated using a formula, and it was found that the energy transfer efficiency could reach up to 88.22%. The detection solution was prepared by uniformly dispersing the phosphor in absolute ethanol. Through a comparative study of a series of metal ions, it was found that the detection solution has a peculiar sensitivity to aqueous solutions containing Cu2+. At the same time, the relationship between the fluorescence intensity of the detection solution and the concentration of Cu2+ was studied, and the cause of fluorescence quenching caused by Cu2+ ions was analyzed from the perspective of energy transfer. From this work, it is considered that the phosphor has a great potential application in the determination of Cu2+ in practical wastewater. [ABSTRACT FROM AUTHOR]

The subject of this paper is a reconstruction of the architectural decoration of a façade of the House of Aion in Nea Paphos. During an excavation carried out in 1997 several pieces of decorated architectural elements were uncovered in room 19, among others the fragments of an arch, a lintel, an engaged column, an impost and two consoles. Those blocks served as a base for the reconstruction of the architectural frame of the main gateway. It took the form of a cantilevered, blind arcade of five spans erected above the main gate. Each span consisted of two engaged columns supporting an arch with a shallow niche underneath it, probably for a kind of decorative element. The reconstruction was based on similar architectural details known from the main room of the House of Aion, the Porta Aurea at the palace of Diocletian in Split, and the western façade of the Felix Romuliana Palace in Gamzigrad. [ABSTRACT FROM AUTHOR]

During the 2014 season a late Hellenistic well was explored as part of the excavations on the Nea Paphos Agora. Many special finds, including ceramic vessels, iron and bronze items, and lamps were found. Moreover, on the bottom of the well a piece of textile attached to metal application was discovered. In our paper, we would like to present preliminary examination of that artefact, which is very uncommon considering the rarity of such remains in Cyprus. [ABSTRACT FROM AUTHOR]

Oil lamps as archaeological finds and in museum collections provide a wealth of information. Various types of studies may be applied to investigate their meaning in ancient times. When several methods are used simultaneously, the objects may be interpreted according to distinct aspects, enabling us to study this group of ceramic objects from a multidisciplinary, comprehensive perspective. Such aspects are described in this paper, supplemented by a case study concerning oil lamps from the Agora in Nea Paphos, Cyprus. [ABSTRACT FROM AUTHOR]

TeO2-BaF2-Er2O3-Dy2O3 laser glasses were prepared using the melt-quenching method. The bound water that can capture the excited state energy was reduced by physical and chemical methods. We did not observe a significant Er3+ emission peak at 2.7 μm in fluorescence spectra, which may be due to the efficient energy transfer process (ET2). Meanwhile, we found a broadband gain span of approximately 400 nm in fluorescence spectra at the 2.85 μm band, attributed to the 'vector summation' of the energy level radiation transition and the change of the glass network. Subsequently, we explored the structural properties of the glass. The results indicated that the Gaussian peak located at 250 cm−1 drifts toward 370 cm−1, which may be caused by the fracture or recombination of Te-O-Te and a decrease in the bridge oxygen content with the increasing concentration of Er2O3. The topology cage structure around the luminescence center of rare earth ions is changed and the stability of the optically active center is enhanced, finally contributing to the enhancement of luminescence. Meanwhile, the maximum σemi and gain coefficient of Dy3+ reach up to 7.22 × 10−21 cm2 and 7.37 cm−1, respectively. The comprehensive results show that the fluorotellurite glass designed in this study is expected to be a gain medium for mid-infrared lasers in remote sensing monitoring, military, and other fields. [ABSTRACT FROM AUTHOR]

Group 3 medulloblastoma is one of the most aggressive types of childhood brain tumors. Roughly 30% of cases carry genetic alterations in MYC, SMARCA4, or both genes combined. While overexpression of MYC has previously been shown to drive medulloblastoma formation in mice, the functional significance of SMARCA4 mutations and their suitability as a therapeutic target remain largely unclear. To address this issue, we combined overexpression of MYC with a loss of SMARCA4 in granule cell precursors. Both alterations did not increase proliferation of granule cell precursors in vitro. However, combined MYC overexpression and SMARCA4 loss successfully induced tumor formation in vivo after orthotopic transplantation in recipient mice. Resulting tumors displayed anaplastic histology and exclusively consisted of SMARCA4-negative cells although a mixture of recombined and non-recombined cells was injected. These observations provide first evidence for a tumor-promoting role of a SMARCA4 deficiency in the development of medulloblastoma. In comparing the transcriptome of tumors to the cells of origin and an established Sonic Hedgehog medulloblastoma model, we gathered first hints on deregulated gene expression that could be specifically involved in SMARCA4/MYC driven tumorigenesis. Finally, an integration of RNA sequencing and DNA methylation data of murine tumors with human samples revealed a high resemblance to human Group 3 medulloblastoma on the molecular level. Altogether, the development of SMARCA4-deficient medulloblastomas in mice paves the way to deciphering the role of frequently occurring SMARCA4 alterations in Group 3 medulloblastoma with the perspective to explore targeted therapeutic options. [ABSTRACT FROM AUTHOR]

A series of CoCrFeNiMn high-entropy alloy matrix self-lubricating composites were prepared by spark plasma sintering. The composites are composed of an FCC phase, Cr7C3, Ag, and eutectic fluoride BaF2/CaF2 phases. The microstructure of the composites is uniform. The additional phases distribute along the boundary of equiaxed grains of the FCC phase. The compressive yield strength and fracture toughness decrease with the increase of eutectic fluoride BaF2/CaF2. The composites are susceptible to brittle cleavage fracture. [ABSTRACT FROM AUTHOR]

Alternative techniques have been investigated for effectiveness in caries removal because conventional metallic dental burs can lead to an excessive loss of sound tissue. The aim of the present study is to realize a preliminary approach in obtaining effective polymer mixtures for polymeric bur development, capable of removing primary dental caries using combinations of polymers to ensure the requirements for such instruments, but also a greater compatibility with the teeth structure. This study assessed the main mechanical properties, water sorption, solubility and microscopic structure of four new polymer mixture recipes to provide essential features in obtaining experimental self-limited dental burs. Two mixtures have in their composition polymer mixtures of Bis-phenol A diglycidyl ether dimethacrylate/Triethylene glycol dimethacrylate/Urethane dimethacrylates (R1, R2), and two other mixtures have Bis-phenol A diglycidyl ether dimethacrylate/Polymethyl methacrylate/Methyl methacrylates (R3, R4). The incorporation of nanoparticles into the polymer matrix has become essential due to the need of polymer biocompatibility increasing along with teeth surface remineralization, so that the powder charge was added to four recipes, such as 5% glass with BaF2 and 0.5% graphene with silver particles. All data sets were analyzed using the One-Way ANOVA test. R3, R4 showed higher compressive strength and diametrical compression values; these values increased when glass and graphene were added. Moreover, the addition of glass particles lead to an increase in flexural strength. Regarding the sorption, sample R3 had the most significant differences between day 69 and the rest of the investigation days, while the solubility varied at different intervals. From the mechanical evaluation, we could conclude that the Bis-GMA/PMMA/MMA mixtures fit the mechanical characteristics supported by polymer burs, following future studies regarding their use on the affected dentin. [ABSTRACT FROM AUTHOR]

Q960 high-strength steel is widely used in pressure vessels, bridges, offshore platforms and other important steel structural components because of its high strength and good plastic toughness, but alloy elements added to this kind of steel have strong hardenability, especially after welding, so the strength and toughness cannot meet the requirements, which limits its application in a wider range. In this paper, from the point of view of the metallurgical treatment of the weld, the goal is to improve the strength and toughness of the Q960 high strength steel weld metal In order to analyze the influence of Zr on the welding process of Q960 steel and the strengthening and toughening effect of weld metal, this paper takes Fe-Mn-Mo-Cr-Ni as the main alloy system, BaF2-CaF2-Al-Mg as the basic slag system, and adopts the method of melting consumable electrode self-shielded for welding, and analyzes the welding process, microstructure, tensile property and impact toughness of the welded joint. The experimental results show that when the weld metal contains 0.0061% Zr, the minimum spatter rate is only 7%, the maximum slag removal rate is 95%, the maximum hardness is 357HV, the maximum elongation is 34%, and the impact toughness is the highest. At this time, the acicular ferrite content in the weld microstructure is the highest, and there is a certain amount of equiaxed fine-grained ferrite, and the content of proeutectoid ferrite is the least, which effectively improves the strength and toughness of the weld metal. [ABSTRACT FROM AUTHOR]

The Australian archaeological mission to Nea Paphos in Cyprus has begun exploring the remains of a structure to the rear of the cavea of the ancient theatre on the southeastern edge of the hill known as Fabrika. The preliminary results of this excavation suggest a significantly large post-medieval building constructed using stone taken from the former theatre. The building appears to have been used in some sort of industrial production, the precise nature of which is not yet determined, and is perhaps the source of the etymology of the name of the hill. This paper discusses a need for a reassessment of this area of the city of Nea Paphos in its more recent history, and discusses the needs for a better understanding of the urban relationship between Fabrika and the theatrical precinct during the Hellenistic and Roman periods. [ABSTRACT FROM AUTHOR]

This paper analyses current trends and approaches towards the conservation of abandoned monuments, demonstrating different strategies applied to historical buildings in Cyprus with an emphasis on medieval monasteries. Through the examination of two cases - the restoration of Panayia tou Sinti Monastery in Paphos and the revival of Ayios Nicolaos Monastery in Orounda - the positive and negative consequences of the different philosophy and strategy followed in each case is demonstrated. With the involvement of the authors, the monastery of Panayia tou Sinti was partly restored in the form of ruins and became an open-air museum, whereas the monastery of Ayios Nicolaos underwent a comprehensive maintenance and new extensions were designed by the authors using appropriate materials and forms. Through these examples, the different concepts of conserving historic complexes - such as 'museum' conservation, final form of ruins, matters of authenticity, dynamic maintenance, compatibility of materials, structural reinforcement - are discussed. This paper demonstrates that before making final decisions for the strategy to be followed for the conservation of a historic abandoned building, investigation and assessment of all its values within the philosophical framework of international principles for rehabilitation should be conducted. [ABSTRACT FROM AUTHOR]

Glasses with the mol% compositions 1.88 Na2O·15.04 K2O·7.52 Al2O3·69.56 SiO2·6.00 BaF2 and 1.88 Na2O·15.03 K2O·7.52 Al2O3·69.52 SiO2·6.00 BaF2·0.05 SmF3 were studied using X-ray diffraction, transmission electron microscopy, and anomalous small-angle X-ray scattering (ASAXS). While the glass doped with samarium showed liquid/liquid phase separation of droplets with sizes of around 100 nm, the glass without samarium did not. The samples were annealed at 580 °C or at 600 °C which led to the crystallization of cubic BaF2. The X-ray diffraction patterns showed strongly broadened lines. Hence, the BaF2 crystals possess sizes in the nm range. ASAXS gave evidence of a core shell structure. In agreement with earlier studies, it is assumed that the shell acts as a diffusion barrier that hinders crystal growth. Surprisingly, the cores and shells from the crystallization of the homogeneous glass and from the second glass, which is Sm-doped and shows liquid/liquid phase separation, both possess similar dimensions, even though the origin of the barrier is very different. The doped samples show long luminescence lifetimes of nearly 5 ms at a wavelength of 600 nm, which is nearly as long as those in fluoride phosphate glasses. [ABSTRACT FROM AUTHOR]

A simple and general dried droplet calibration approach was developed for the quantitative analysis of elements in inorganic nonmetallic materials using laser ablation inductively coupled plasma mass spectrometry (LA-ICP-MS). For quantitative analysis, the elemental distribution in dried droplets was improved by optimizing the amount of a surfactant (Pluronic F-127) added into the calibration solutions and the drying temperature. Under optimal conditions, at 2.0 wt% Pluronic F-127 in the calibration solutions and a drying temperature of 85 °C, the relative standard deviation of the signal intensity obtained from multi-line ablation mode is less than 20% for dried droplets. Meanwhile, the experimental results revealed that dried droplets have no effect on the ablation of the sample and dried droplets can be totally ablated in one ablation raster. Further, the method was applied to analyze several inorganic non-metallic materials such as yttrium aluminum garnet (YAG) ceramic, BaF2 crystal, and NIST SRM 612 glass. The linear correlation coefficients of the calibration curves ranged from 0.9936 to 0.9999 without any internal standard correction. Moreover, the results agree well with the results obtained by inductively coupled plasma atomic emission spectrometry or inductively coupled plasma atomic mass spectrometry and certified values. [ABSTRACT FROM AUTHOR]

We report different growth modes and corresponding magnetic properties of thin EuSe films grown by molecular beam epitaxy on BaF2, Pb1−xEuxSe, GaAs, and Bi2Se3 substrates. We show that EuSe grows predominantly in the (001) orientation on GaAs(111) and Bi2Se3, but along the (111) crystallographic direction on BaF2 (111) and Pb1−xEuxSe (111). High resolution transmission electron microscopy measurements reveal a sharp and highly crystalline interface for both (001) and (111) EuSe films. In agreement with previous studies, ordered magnetic phases include antiferromagnetic, ferrimagnetic, and ferromagnetic phases. In contrast to previous studies, we found a strong hysteresis of the antiferromagnetic–ferrimagnetic transition. The ability to grow epitaxial films of EuSe on Bi2Se3 and of Bi2Se3 on EuSe enables further investigation of interfacial exchange interactions between various phases of an insulating metamagnetic material and a topological insulator. [ABSTRACT FROM AUTHOR]

The aim of image-based localization (IBL) is to localize the real location of query image by matching reference image in database with GNSS-tags. Popular methods related to IBL commonly use street-level images, which have high value in practical application. Using street-level image to tackle IBL task has the primary challenges: existing works have not made targeted optimization for urban IBL tasks. Besides, the matching result is over-reliant on the quality of image features. Methods should address their practicality and robustness in engineering application, under metropolitan-scale. In response to these, this paper made following contributions: firstly, given the critical of buildings in distinguishing urban scenes, we contribute a feature called Building-Aware Feature (BAF). Secondly, in view of negative influence of complex urban scenes in retrieval process, we propose a retrieval method called Patch-Region Retrieval (PRR). To prove the effectiveness of BAF and PRR, we established an image-based localization experimental framework. Experiments prove that BAF can retain the feature points that fall on the building, and selectively lessen the feature points that fall on other things. While this effectively compresses the storage amount of feature index, we can also improve recall of localization results; implemented in the stage of geometric verification, PRR compares matching results of regional features and selects the best ranking as final result. PRR can enhance effectiveness of patch-regional feature. In addition, we fully confirmed the superiority of our proposed methods through a metropolitan-scale street-level image dataset. [ABSTRACT FROM AUTHOR]

New coordination polymers with 2D network structures with fluorine directly coordinated to the metal ion were prepared both via mechanochemical synthesis and fluorolytic sol–gel synthesis. Depending on the synthesis route, the samples show different particle sizes, according to SEM imaging. The crystal structures of barium acetate fluoride, strontium acetate fluoride, and lead acetate fluoride (BaF(CH3COO), SrF(CH3COO) and PbF(CH3COO)) were solved from X-ray powder diffraction data. The structure solution is backed by the results from 19 F MAS NMR, FT IR data, and thermal analysis. The calculated chemical shifts of the 19 F MAS NMR spectra coincide well with the measured ones. It turns out that the grinding conditions have a remarkable influence on the mechanochemical synthesis and its products. Our systematic study also indicates a strong influence of the atomic radii of Ca, Sr, Ba, and Pb on the success of the syntheses. [ABSTRACT FROM AUTHOR]

Phase pure BaF2 doped with Ce3+ (0.1%) nanocrystals are synthesized using an ionic liquid (IL) ([C4mim][BF4]) assisted solvothermal method where the IL is not only used as a reaction medium and a capping agent, but also as a reaction partner. Subsequently, upon calcining the as-prepared nanocrystals at various temperatures (200, 400, 600 and 800 °C), athough the crystal phase remains the same, however, a significant change in the lattice strain and morphology is observed. Tensile strain appears in the nanocrystals calcined at temperatures up to 400 °C, but a reversal of the strain, i.e. compressive strain, takes place when calcination is performed at 600 °C and onwards. Nanoflakes are obtained until calcination at 400 °C. However on calcination at 600 °C and beyond, a drastic modification in the morphology is observed. Layer or step-like structures appear due to secondary nucleation of nanoparticles. Meanwhile, the photoluminescence (PL) intensity of Ce3+ ions gradually decreases with the calcination temperature and finally vanishes at 600 °C/800 °C. To investigate the reasons for the quenching of the PL intensity, thermally stimulated luminescence (TSL) and thermally stimulated exoelectron emission (TSEE) measurements are performed. The TSL and TSEE results indicate that in addition to the domination of deeper electron traps that appear as a high-temperature shift of TSEE glow peaks for both 600 °C and 800 °C, some new types of defects like F vacancies (F-centers) can be present, especially in the 800 °C calcined sample. The conditions leading to the quenching of Ce3+ luminescence in the nanoparticles are analyzed and discussed. [ABSTRACT FROM AUTHOR]

We study the self-collimation phenomenon in photonic crystals (PhC) of wide bandgap materials for ultra-fast and high spatial resolution x-ray detection. We work on various heavy inorganic scintillators: BaF2, GaN, ZnO, CsI:Tl, NaI:Tl, LYSO, WO4 compounds, and plastic scintillators. Conventional scintillator detectors do not rely on a direct detection mechanism; hence, they require intricate design and fabrication processes. We offer a PhC design to observe self-collimation phenomena and overcome the ongoing spatial resolution challenges with these types of materials. We investigate the photonic band diagrams and iso-frequency contours. Fourier transforms based on finite-difference time-domain and frequency domain simulations are done for verifying and analyzing the self-collimation with the selected material. Light extraction efficiency at the PhC–air interface, depending on the truncation distance from the excitation point, is measured. Beam divergence values are calculated at 1 mm propagation distance. The vertical field profiles are obtained to observe the confinement. For the spatial resolution analysis, cross-sectional beam profiles have been examined. Gaussian envelopes are fitted to beam profiles for a consistent data analysis, and full-width-at-half-maximum values are considered. As a result, we theoretically prove and demonstrate the spatially resolved x-ray detection at the sub-micrometer level for a wide range of scintillator materials. [ABSTRACT FROM AUTHOR]

A measurement of the magnitude of the electric dipole moment of the electron (eEDM) larger than that predicted by the Standard Model (SM) of particle physics is expected to have a huge impact on the search for physics beyond the SM. Polar diatomic molecules containing heavy elements experience enhanced sensitivity to parity (P) and time-reversal (T)-violating phenomena, such as the eEDM and the scalar–pseudoscalar (S–PS) interaction between the nucleons and the electrons, and are thus promising candidates for measurements. The NL-eEDM collaboration is preparing an experiment to measure the eEDM and S–PS interaction in a slow beam of cold BaF molecules [P. Aggarwal et al., Eur. Phys. J. D 72, 197 (2018)]. Accurate knowledge of the electronic structure parameters, Wd and Ws, connecting the eEDM and the S–PS interaction to the measurable energy shifts is crucial for the interpretation of these measurements. In this work, we use the finite field relativistic coupled cluster approach to calculate the Wd and Ws parameters in the ground state of the BaF molecule. Special attention was paid to providing a reliable theoretical uncertainty estimate based on investigations of the basis set, electron correlation, relativistic effects, and geometry. Our recommended values of the two parameters, including conservative uncertainty estimates, are 3.13 ± 0.12 × 1 0 24 Hz e cm for Wd and 8.29 ± 0.12 kHz for Ws. [ABSTRACT FROM AUTHOR]

The city of Nea Paphos is the only ancient city of Cyprus to have preserved much of the painted decoration of its buildings and tombs and the following paper aims to present a fresco that has recently come to light in one of the cemeteries of the city. The newly found painting was discovered on the right-hand side of the entranceway to the funerary chamber of a tomb of Hellenistic and Roman date and may be part of a larger decoration that has been destroyed. A human figure, possibly a young man, is depicted inside a frame created by branches bearing pomegranates. The figure is holding a fruit and is turned to his right, possibly towards another person. Behind him, an open mirror hangs from the wall over something that looks like a funerary monument. Although fragmentary, the scene depicts features that have a deeply symbolic meaning observed for the first time in Paphos. It presents an opportunity to examine new funerary iconography and discuss issues concerning afterlife beliefs in the ancient city. [ABSTRACT FROM AUTHOR]

The word 'Paphos' emerged as early as the 7th century BC and was subsequently written in varying manners, firstly on inscriptions and later in literary texts. Yet it is only from about the second half of the 4th century BC that it appears inscribed on coins, solely in Greek alphabetic characters. The word is abbreviated to one, two or four letters, which sometimes form a monogram. On the extremely rare silver coins of the last king of Paphos, Nikokles, Paphos is written in a related form, ΠAΦIΟΝ and the exact meaning of this word will be considered in this paper. A further legend, ΠΒA, written behind the neck of a crowned female head on these late coins and the identification of the head itself have prompted several differing interpretations. The exceptional crown of this figure, the legend and the depiction as a whole will be studied within the political, historical and religious context of Paphos. [ABSTRACT FROM AUTHOR]

In September 2008, over the course of excavations at the Early Roman House, the bust of a young man was discovered in Room 24. He is depicted with curly hair and is wearing a conical cap. The author of this paper discusses the possible identification of the sculpture. There are two differing ideas. According to the first, the young man could be identified as one of the Dioskouroi, while the other theory considers him to be Attis. The author does not determine conclusively which of the concepts is appropriate, because both are supported by strong evidence. [ABSTRACT FROM AUTHOR]

Background: Disrupted intestinal epithelial barrier is one of the major causes of Crohn's disease (CD). Novel molecular targets for intestinal epithelial barrier are essential to treatment of CD. Transmembrane and immunoglobulin domain-containing protein 1 (TMIGD1) is an adhesion molecule that regulates cell adhesion, migration, and enterocyte differentiation. However, the function and mechanism of TMIGD1 in CD and intestinal epithelial barrier has rarely been studied. Furthermore, the association between TMIGD1 and the clinical features of CD remains unclear. Methods: Transcriptome analysis on colonic mucosa from CD patients and healthy individuals were performed to identify dysregulated genes. Multi-omics integration of the 1000IBD cohort including genomics, transcriptomics of intestinal biopsies, and serum proteomics identified the association between genes and characteristics of CD. Inflammation was assessed by cytokine production in cell lines, organoids and intestinal-specific Tmigd1 knockout (Tmigd1INT-KO) mice. Epithelial barrier integrity was evaluated by trans-epithelium electrical resistance (TEER), paracellular permeability, and apical junction complex (AJC) expression. Co-immunoprecipitation, GST pull-down assays, mass spectrometry, proteomics, and transcriptome analysis were used to explore downstream mechanisms. Results: Multi-omics integration suggested that TMIGD1 was negatively associated with inflammatory characteristics of CD. TMIGD1 was downregulated in inflamed intestinal mucosa of patients with CD and mice colitis models. Tmigd1INT-KO mice were more susceptible to chemically induced colitis. In epithelial cell lines and colonic organoids, TMIGD1 knockdown caused impaired intestinal barrier integrity evidenced by increased paracellular permeability and reduced TEER and AJC expression. TMIGD1 knockdown in intestinal epithelial cells also induced pro-inflammatory cytokine production. Mechanistically, TMIGD1 directly interacted with cytoplasmic BAF nuclear assembly factor 1 (BANF1) to inhibit NF-κB activation. Exogenous expression of TMIGD1 and BANF1 restored intestinal barrier function and inhibited inflammation in vitro and in vivo. TMIGD1 expression predicted response to anti-TNF treatment in patients with CD. Conclusions: Our study demonstrated that TMIGD1 maintained intestinal barrier integrity and inactivated inflammation, and was therefore a potential therapeutic target for CD. [ABSTRACT FROM AUTHOR]

Simple Summary: The generation of an artificial intestine could minimize the use of in vivo trials, which are presently necessary for testing aquafeeds. As well as being lengthy and expensive, they also require the use of many animals. Furthermore, although in vivo screening allows for a precise evaluation of the final effect of each feed, it does not improve our basic knowledge of the cellular and molecular mechanisms that determine the end results. This, in turn, severely limits our ability to understand and predict the biological value of ingredients, both individually and in differing combinations thereof. To circumvent these constraints, we previously derived and characterized two novel cell lines from the proximal (RTpi-MI) and distal intestine (RTdi-MI) of rainbow trout (Oncorhynchus mykiss), demonstrating that the two cell lines retain the main properties of the intestinal tracts from which they originate. In the present work, we used these cells to set up a functional intestinal barrier on a permeable membrane support to investigate the digestion and absorption of dietary amino acids in fish feed. The results demonstrate that the procedure we developed enables the quantification of individual amino acids that cross the intestinal wall. This new platform will now be used to screen and select new feed ingredients/formulations. The ever-increasing number and variation of raw materials utilized to provide alternative feed formulations continues to allow for a more sustainable and flexible approach. Testing all these options in vivo is still the most robust and reliable manner to pick the best raw material candidates, but it requires the use of large numbers of animals and is time-consuming and expensive. Therefore, we are developing an in vitro platform that can provide a reliable evaluation of new ingredients. The main aim of this work was to combine an in vitro digestion protocol of extruded, commercially relevant aquafeeds with the exposure of intestinal epithelial cells to the extracted bio-available fraction (BAF). The results show that 250,000 cells/cm2 represents the optimal seeding density and that up to 50% BAF concentration for up to 24 h had no negative effects on the epithelial barrier morphology and function. It is possible to determine amino acid digestibility and bioavailability in all the experimental conditions (with and without BSA, at 25% and 50% dilution) and at all time points (0, 6, and 24 h). However, BAF concentration, the medium used for its dilution, and the length of exposure to the different epithelial cell lines can all influence the results and, therefore, must be selected according to the final aim of the experiment. [ABSTRACT FROM AUTHOR]

Heavy metals (HMs) have the characteristics of high toxicity, long residual time, and difficult degradation, which pose a potential threat to aquatic ecosystems. The distribution and migration of HMs in different media can reflect their potential impact on aquatic ecosystem health. In this study, we analyzed the distribution characteristics of seven HMs (Zn, Cu, Cr, Ni, Hg, As, and Pb) in the water and sediment and five groups of organisms (fish, Crustacean, cephalopod, bivalvia, and gastropoda) in the sea ranching area of Haizhou Bay and explored the regularity of HM accumulation from water and sediments to organisms. The results showed that in the water, Zn and Hg had the smallest concentrations in the nearshore area, Cr had the lowest concentrations in the offshore area, and As, Cu, Pb, and Ni had the lowest concentrations in the central area. In the sediment, Hg had the smallest concentrations in the nearshore area and As, Pb, Cr, Cu, Ni, and Zn had the lowest concentrations in the offshore area; the average contents of seven heavy metals all meet the Class I standard of sediments in China. The concentrations of Cu and Zn in crustaceans were significantly higher than those in fishes (p < 0.05), and As showed a higher enrichment effect in cephalopods. Under the influence of feeding habits and habitat environment, the BAF value of benthic crustaceans and bivalvia accumulated HMs from sediments is high, and the BAF value of fish accumulated HMs from water and sediments is low. Overall, the concentration of HMs in water is high, and HMs in sediments are in good condition, crustaceans and bivalviaa have a strong ability to accumulate HMs from water and sediments, while fish are weak. Therefore, in order to ensure the safety of biological quality, it is necessary to focus on the discharge of heavy metal pollutants near the coast in the future. [ABSTRACT FROM AUTHOR]

Selenium (Se) is an essential microelement for human or animal health. At high concentrations, it can cause Se poisoning. Human activities (such as coal burning and mining) threaten soil biota by mobilizing high levels of Se. We used the earthworm Eisenia fetida as a bio-indicator of environmental pollutants to investigate Se acute toxicity, enrichment, and distribution through exposure tests using filter paper, artificial soil and cow manure. The 24 h- and 48 h-LC 50 for the filter paper contact test were 2.7 and 1.52 μg/cm2. In artificial soil test, the 14 d-LC 50 and 14 d-biomass inhibition concentration (IC 20) were 63.86 and 59.81 mg/kg, respectively. The cow manure resulted in a 2.2- and 2.6-fold higher LC 50 and IC 20 than artificial soil results, respectively. Earthworms accumulated the largest Se load (89.47 mg/kg) in artificial soil containing 80 mg Se/kg and only accumulated 90.3 mg/kg in cow manure containing 160 mg Se/kg; 46.6–60.59% of the total Se was distributed in the tail of E. fetida. The Se enrichment rate (SER Se) and bioaccumulation factor (BAF Se) scored higher in artificial soil than in cow manure with the same Se concentration exposure, and the highest SER Se was 6.21 and 6.31 mg Se/kg earthworm/d, respectively. The highest BAF Se was 1.49 in artificial soil and 0.75 in cow manure. Our results demonstrate that selenite is more toxic to earthworms living in artificial soil than in cow manure. E. fetida possesses certain Se detoxification mechanisms by distributing Se in the tail. [Display omitted] • 48 h LC 50 of selenite toxicity to earthworm was 1.52 μg/cm2 in the filter paper test. • Earthworms exposed to artificial soil had lower LC 50 and IC 20 than in cow manure. • Earthworms suffered greater Se burden in artificial soil compared to cow manure. • Earthworm mainly distributed Se in the tail to alleviate Se toxicity. • Selenite was more toxic to earthworms in artificial soil than that in cow manure. [ABSTRACT FROM AUTHOR]

ErF3-doped TeO2–Ga2O3–BaF2–AlF3–Y2O3 (TGBAY) glasses with high fluorescence efficiency and a high thermal damage threshold were developed for potential mid-infrared fiber laser applications. A model 2.7-μm fiber laser based on this material was analyzed using rate and propagation equations. Under 808 and 980 nm laser pumping, fluorescence emissions with central wavelength at 1.55 and 2.73 μm were detected. Based on the Judd–Ofelt (J–O) theory, the intensity parameters (Ωλ, λ = 2, 4, and 6) and radiative transition property were calculated and characterized through absorption and emission spectra. The results indicated that tellurite–gallium oxyfluoride glass had a high glass transition temperature (Tg, ∼391 °C), large emission cross sections at 1.55 μm (6.32 × 10−21 cm2) and 2.73 μm (9.68 × 10−21 cm2) as well as a longer fluorescence lifetime (6.84 ms at 1.55 μm and 262 μs at 2.73 μm) relative to the conventional Er3+-doped tellurite glass. The temperature dependence of the emission spectra indicated that TGBAY-2Er glass was more favorable to achieve infrared emission at low temperatures. Numerical simulation revealed the feasibility of achieving a ∼2.7 μm fiber laser operation based on the developed Er3+-doped tellurite–gallium oxyfluoride glass fiber. [ABSTRACT FROM AUTHOR]

Abstract In this paper, BaAl 11 O 16 N (BAON) based oxynitride phosphors have been synthesized via the employment of the flux method and Eu2+/Mn2+ co-doped technique. The effects of different fluxes on phase formation of the phosphor have been investigated. It has been found that BaF 2 is the best flux to prepare BAON as it can decrease the pure phase-forming temperature (∼1550 °C) than the normal solid state synthesis (∼1700 °C). It also gives the best luminescence quantum efficiency. The crystallinity, morphology and grain size of the phosphor can be improved when more BaF 2 flux has been added. The photoluminescence (PL) spectra and decay curves for Eu2+/Mn2+co-doped BAON phosphors reveal that an efficient energy transfer (ET) from Eu2+ to Mn2+ takes place in the BAON host. The corresponding ET efficiencies and mechanisms are evaluated and the critical distance (R c) is calculated in terms of the experimental data and analysis. The emission colors of the co-doped phosphors can be tuned from blue to green by simply varying the doping concentrations of Mn2+. White light-emitting diodes (WLEDs) are fabricated by coating the as-prepared samples on a near ultraviolet (n- UV) LED chip to explore the real application potentials. The excellent performance of this WLEDs verifies that the co-doped phosphor can be used as an efficient green component. Graphical abstract Image 1 Highlights • A simple flux fusion routine for synthesizing BaAl 11 O 16 N:Eu2+,Mn2+ oxynitride phosphors. • Energy transfer between Eu2+ and Mn2+ takes a place in the BaAl 11 O 16 N host. • The WLEDs based on the as-prepared phosphors presents excellent warm white light performance. [ABSTRACT FROM AUTHOR]

Abstract In this paper, we studied the gamma photon attenuation properties for different germanate glasses systems with composition Sb 2 O 3 –GeO 2 –SiO 2 –Al 2 O 3 , TeO 2 –WO 3 –GeO 2 , GeO 2 –TeO 2 /SiO 2 –PbO–CaO–Tm 2 O 3 and B 2 O 3 –GeO 2 –Gd 2 O 3 –Eu 2 O 3 –GdF 3 –BaF 2. The mass attenuation coefficients (μ/ρ) for the selected germanate glasses were calculated at different energies (between 0.015 MeV and 15 MeV) using the MCNPX code. The calculated MCNPX μ/ρ values then compared with the WinXCom data to check the accuracy in the results. The results showed that the Sb 2 O 3 replacement by SiO 2 causes a decrease in μ/ρ for Sb 2 O 3 –GeO 2 –SiO 2 –Al 2 O 3 glass system. Also, it is found that for TeO 2 –WO 3 –GeO 2 glass system, μ/ρ decreases as GeO2 content increases from 1 to 20 mol%. While for GeO 2 –TeO 2 /SiO 2 –PbO–CaO–Tm 2 O 3 glass system, the results revealed that the glass samples contain TeO 2 possess higher μ/ρ values than the samples contain SiO 2. For the B 2 O 3 –GeO 2 –Gd 2 O 3 –Eu 2 O 3 –GdF 3 –BaF 2 glasses, we found that the μ/ρ values decrease as BaF 2 is increased from 0 to 15 mol%. Moreover, it is found that 50Sb-0Ge for series 1, TWG0 for series 2, 2G4T for series 3 and X = 0 for series 4 glass samples among the studied glasses have the highest effective atomic number values. On the basis of the results achieved, 50Sb-0Ge, TWG0, 2G4T and X = 0 samples have the best radiation shielding characteristics among the selected glasses. Highlights • Radiation shielding characteristics of different germanate glasses have been investigated. • The μ/ρ for the selected germanate glasses was evaluated by MCNPX simulation code at different energies. • The HVL results for the present germanate glasses suggested that the gamma photons absorption capacity increases as the density of the sample increases. [ABSTRACT FROM AUTHOR]

WRKY transcription factors (TFs) play an important role in regulating plant growth and responses to environmental stress. However, the molecular mechanism of WRKY to cadmium (Cd) stress is unclear, which prevents phytoremediation of Cd-contaminated soil from widely application. To determine the underlying mechanism, PyWRKY48 -overexpressing poplars were obtained (OE-32 and OE-67) to study the Cd tolerance and accumulation in poplars. Results showed that the Cd content in the aboveground part of the two transgenic poplar lines were 1.57 and 1.99 times higher than that of wild type (WT), and lateral roots, GSH, PCs content and GST activity increased significantly. RNA-seq. data about transgenic and WT poplars revealed that 2074 differentially expressed genes (DEGs) in roots, 4325 in leaves, and 499 in both tissues. And these DEGs were mainly concentrated in ABC transport protein (PaABC), heavy-metal binding protein (PaHIPP), and transportation and loading of xylem (PaNPF , PaBSP) proteins, and they enhanced Cd accumulation. Meanwhile, PyWRKY48 increased the Cd tolerance of transgenic poplars by up-regulating the expression of PaGRP , PaPER and PaPHOS , which encode cell wall proteins, antioxidant enzyme, and heavy metal-associated proteins, respectively. In addition, overexpression PyWRKY48 promoted poplar growth by increasing the chlorophyll a nd carotenoid content. This study generated PyWRKY48 -overexpressing poplars and functionally verified them in Cd-contaminated soil, to analyze the effects of the gene on poplar growth, Cd tolerance and Cd accumulation. RNA seq. data revealed that several genes are involved in Cd exposure. This may provide a strong molecular basis and new ideas for improving the phytoremediation efficiency of Cd-contaminated soils. Importantly, the transgenic poplars grew better and accumulated more Cd than the wild-type. Therefore, PyWRKY48 -overexpressing poplars could be considered useful for mitigating environmental pollution. • Overexpressed PyWRKY48 poplars grew better than the wild type. • Overexpressed PyWRKY48 poplars enhanced cadmium tolerance and accumulation. • PaABC , PaHIPP , PaNPF , PaBSP , etc. may involve in cadmium stress induced by PyWRKY48. [ABSTRACT FROM AUTHOR]

Perfluorooctanoic acid (PFOA) is a representative persistent organic pollutant and its disposal by mechanochemical (MC) technology emerges in recent years. However, degradation mechanism of PFOA especially rupture of C−F bonds during MC process is still unclear. Therefore, we innovatively employed barium titanate as co-milling reagent in MC system to disclose an electron-dominated reduction process. By stimulating piezoelectric effect of BaTiO 3 under MC impact, free electrons were generated. The results implied more than 95.00% degradation and 60.00% defluorination efficiency were obtained after 6 h′ ball milling. DPPH• was used as probe to confirm the existence of piezo-excited electrons, which were further verified to be major reactive species by atmosphere experiments. Thus, PFOA destruction was dominated by reduction process, characterizing by breakage of C−F bonds induced by electrons. Accordingly, the fate of organic fluorides was explored and BaF 2 was identified as final product. The cleavage of carboxyl group initiated PFOA decomposition, following by successive removal of CF 2 groups and elimination of F−. Moreover, the practical experiments and reusable trials implied promising application of this method. Overall, this paper provides a novel perspective for reductive decomposition of PFOA by MC technology and reveals the major role of electrons during reaction process. [Display omitted] • PFOA is reductive degraded in solid phase by MC technology using BaTiO 3. • Free electrons generated by piezoelectric effect is main reactive species. • Organic fluorine detaches from carbon chain and converts into BaF 2. • Effects of soil matrix is systematically evaluated. [ABSTRACT FROM AUTHOR]

Growing concerns over environmental issues and sustainable living have resulted in increased interest in renewable energy and energy efficiency. The real estate market is no exception, with homeowners increasingly considering the market value of green and sustainable buildings, which can offer both energy efficiency and potential health benefits. This study investigates the level of interest among homeowners in investing in renewable energy sources and energy efficiency measures for their homes and how it relates to their perception of the market value of green or sustainable buildings in the real estate market. A survey was conducted in the Paphos urban complex in Cyprus, with 180 participants over the age of 18. The participants were selected through a random sampling method and were representative of the general population in terms of gender, age, and income. Data were collected on their attitudes towards renewable energy sources and energy efficiency, as well as their perceptions of the market value of green buildings. The data collected were analyzed using various statistical methods, including Cronbach's α coefficient, the non-parametric Friedman test, descriptive statistics, and factor analysis, with the Statistical Package for the Social Sciences (SPSS) being used for coding and analysis. Results indicate that 64% of the homeowners surveyed were interested in investing in renewable energy sources, and 72% were interested in energy efficiency measures. Additionally, findings suggest a moderate level of interest (58%) among homeowners in investing in renewable energy sources and that this is positively associated with their perception of the market value of green buildings. Furthermore, homeowners with higher income and education levels tend to be more interested in investing in renewable energy sources and energy efficiency measures and perceive green buildings as having higher market value. This study provides insights into the factors that drive homeowners' investment in renewable energy sources and energy efficiency measures, shedding light on the relationship between homeowners' perceptions of the market value of green buildings and their interest in such investments. [ABSTRACT FROM AUTHOR]

Diffuse midline gliomas (DMGs) including diffuse intrinsic pontine gliomas (DIPGs) bearing lysine-to-methionine mutations in histone H3 at lysine 27 (H3K27M) are lethal childhood brain cancers. These tumors harbor a global reduction in the transcriptional repressive mark H3K27me3 accompanied by an increase in the transcriptional activation mark H3K27ac. We postulated that H3K27M mutations, in addition to altering H3K27 modifications, reprogram the master chromatin remodeling switch/sucrose nonfermentable (SWI/SNF) complex. The SWI/SNF complex can exist in two main forms termed BAF and PBAF that play central roles in neurodevelopment and cancer. Moreover, BAF antagonizes PRC2, the main enzyme catalyzing H3K27me3. We demonstrate that H3K27M gliomas show increased protein levels of the SWI/SNF complex ATPase subunits SMARCA4 and SMARCA2, and the PBAF component PBRM1. Additionally, knockdown of mutant H3K27M lowered SMARCA4 protein levels. The proteolysis targeting chimera (PROTAC) AU-15330 that simultaneously targets SMARCA4, SMARCA2, and PBRM1 for degradation exhibits cytotoxicity in H3.3K27M but not H3 wild-type cells. AU-15330 lowered chromatin accessibility measured by ATAC-Seq at nonpromoter regions and reduced global H3K27ac levels. Integrated analysis of gene expression, proteomics, and chromatin accessibility in AU-15330-treated cells demonstrated reduction in the levels of FOXO1, a key member of the forkhead family of transcription factors. Moreover, genetic or pharmacologic targeting of FOXO1 resulted in cell death in H3K27M cells. Overall, our results suggest that H3K27M up-regulates SMARCA4 levels and combined targeting of SWI/SNF ATPases in H3.3K27M can serve as a potent therapeutic strategy for these deadly childhood brain tumors. [ABSTRACT FROM AUTHOR]

The altered lysosomal function can induce drug redistribution which leads to drug resistance and poor prognosis for cancer patients. V-ATPase, an ATP-driven proton pump positioned at lysosomal surfaces, is responsible for maintaining the stability of lysosome. Herein, we reported that the potassium voltage-gated channel subfamily J member 15 (KCNJ15) protein, which may bind to V-ATPase, can regulate the function of lysosome. The deficiency of KCNJ15 protein in breast cancer cells led to drug aggregation as well as reduction of drug efficacy. The application of the V-ATPase inhibitor could inhibit the binding between KCNJ15 and V-ATPase, contributing to the amelioration of drug resistance. Clinical data analysis revealed that KCNJ15 deficiency was associated with higher histological grading, advanced stages, more metastases of lymph nodes, and shorter disease free survival of patients with breast cancer. KCNJ15 expression level is positively correlated with a high response rate after receiving neoadjuvant chemotherapy. Moreover, we revealed that the small molecule drug CMA/BAF can reverse drug resistance by disrupting the interaction between KCNJ15 and lysosomes. In conclusion, KCNJ15 could be identified as an underlying indicator for drug resistance and survival of breast cancer, which might guide the choice of therapeutic strategies. [ABSTRACT FROM AUTHOR]

We have optimized the growth conditions of the buffer layer for further deposition of Pb1–xSnxTe (x ≥ 0.4), which has the properties of a crystalline topological insulator. To this end, a three-component heterostructure consisting of CaF2, BaF2, and Pb0.7Sn0.3Te:In layers was formed and optimized on the Si(111) surface. The surface morphology of this structure was studied depending on the temperature growth regimes and the optimal combination of growth parameters was selected from the point of view of smoothness and crystalline quality. [ABSTRACT FROM AUTHOR]

This work aimed to detect changes in trace element chemical speciation in sewage sludge (SS) after the ozonation process. The modified Community Bureau of Reference (BCR) sequential extraction procedure was performed to determine the chemical speciation of trace elements in SS after the ozonation process. To assess potential soil contamination with trace elements from sewage sludge after the ozonation process, the risk assessment code (RAC) coefficient was used. The bioaccumulation factor (BAF) and translocation factor (TF) values were also calculated to characterize the efficiency of trace element accumulation in the studied plant species from soil fertilized with sludges after the ozonation process. Generally, the mean concentration of total trace elements in the SS after the ozonation process was higher, but the differences were statistically significant only in the case of Mn, Cu, Pb, and Cd. The dominant fraction of Fe, Cr, Pb, and Cd was the residual fraction F4, while the extractable/exchangeable fraction F1 was present in the smallest amount. Therefore, in the case of Mn, Zn, and Ni, the ozonation process had a significant impact on the increase in the content of these elements in the F1 fraction. The application of the SS stabilized by ozonation process for maize and wheat fertilization did not significantly affect the bioaccumulation of most of the analyzed metals in aboveground biomass. Higher values of BAF coefficients after the application of ozonated SS were found only in the case of Cu and Ni. In turn, the determined TF coefficients were lower than 1 in most cases. The obtained results showed that the slight change in the concentration of Zn, Mn, and Ni in fraction F1 causes a specific risk of their mobility in the soil environment. It should be noted that due to the variable composition of sewage sludge, an analysis of the content of individual trace elements in chemical fractions should be carried out to assess its actual impact on the environment. This can help to indicate further actions that should be undertaken to limit their negative impact on the environment. [ABSTRACT FROM AUTHOR]

The short-wavelength sub-nanosecond luminescence in BaF 2 material, discovered in the early 80s, gave a new direction to research into fast scintillators and phosphors. In contrast to 'typical' luminescence occurring within the forbidden band gap, the new type of emission was due to transitions between the upper core and valence bands. Thus it was named core-valence luminescence (CVL); the terms cross-luminescence and Auger-free luminescence have also been used. Given its unusual nature, this new luminescence process has attracted considerable interest in the field of condensed matter physics. During the sequent decades (till the end of the previous century) CVL has been experimentally observed in several dozen compounds and the conditions for detecting CVL have been established. Interest in this kind of luminescence increased in recent years due to the emergence of new methods of crystal synthesis, the development of high-speed solid-state photodetectors, and the construction of unique modern set-ups using synchrotron radiation. This paper analyzes the numerous studies of CVL, obtained mainly over the past decade. Experimental and theoretical data on this topic are considered in detail. Special attention is given to new results on scintillation characteristics of BaF 2 in the form of single crystals, ceramics, nanoparticles, and composites. The features of CVL in binary and ternary compounds are discussed. Some Cs- and Ba-based ternary halides show relatively high light yields and represent promising fast scintillators. The prospects of using materials with CVL as fast scintillators for time-of-flight positron emission tomography and other applications are deliberated. • Overview of recent theoretical and experimental findings on Core Valence luminescence. • Most attractive CVL crystals for ultrafast scintillator applications analyzed. • Prospects for future studies and underexplored CVL materials listed. [ABSTRACT FROM AUTHOR]

In spin noise spectroscopy, the magnetic susceptibility spectrum is known to be provided by the spin-system untouched by any external perturbation, or, better to say, disturbed only by its thermal bath. We propose a new version of spin noise spectroscopy, with the detected magnetization (Faraday-rotation) noise being "stimulated" by an external fluctuating magnetic field with a quasiwhite spectrum. An experimental study of the stimulated spin noise performed on a BaF 2 : U 3 + crystal in a longitudinal magnetic field has revealed specific features of this approach and allowed us to identify the Van-Vleck and population-related contributions to the AC susceptibility of the system and to discover unusual magnetic-field dependence of the longitudinal spin relaxation rate in low magnetic fields. It is shown that spectra of the stimulated and spontaneous spin noise, being both closely related to the spin-system magnetic susceptibility, are still essentially different. Distinctions between the two types of the spin-noise spectra and two approaches to spin noise spectroscopy are discussed. [ABSTRACT FROM AUTHOR]

The NL-eEDM collaboration is building an experimental setup to search for the permanent electric dipole moment of the electron in a slow beam of cold barium fluoride molecules [NL-eEDM Collaboration, Eur. Phys. J. D 72, 197 (2018)]. Knowledge of the molecular properties of BaF is thus needed to plan the measurements and, in particular, to determine the optimal laser-cooling scheme. Accurate and reliable theoretical predictions of these properties require the incorporation of both high-order correlation and relativistic effects in the calculations. In this work, theoretical investigations of the ground and lowest excited states of BaF and its lighter homologs, CaF and SrF, are carried out in the framework of the relativistic Fock-space coupled cluster and multireference configuration interaction methods. Using the calculated molecular properties, we determine the Franck-Condon factors (FCFs) for the A 2 Π 1 / 2 → X 2 Σ 1 / 2 + transition, which was successfully used for cooling CaF and SrF and is now considered for BaF. For all three species, the FCFs are found to be highly diagonal. Calculations are also performed for the B 2 Σ 1 / 2 + → X 2 Σ 1 / 2 + transition recently exploited for laser-cooling of CaF; it is shown that this transition is not suitable for laser-cooling of BaF, due to the nondiagonal nature of the FCFs in this system. Special attention is given to the properties of the A′2Δ state, which in the case of BaF causes a leak channel, in contrast to CaF and SrF species where this state is energetically above the excited states used in laser-cooling. We also present the dipole moments of the ground and excited states of the three molecules and the transition dipole moments (TDMs) between the different states. Finally, using the calculated FCFs and TDMs, we determine that the A 2 Π 1 / 2 → X 2 Σ 1 / 2 + transition is suitable for transverse cooling in BaF. [ABSTRACT FROM AUTHOR]

Gammaherpesviruses, including Kaposi sarcoma-associated herpesvirus (KSHV) and Epstein-Barr virus (EBV), are DNA viruses that are globally associated with human cancers and establish lifelong latency in the human population. Detection of gammaherpesviral infection by the cGAS-STING innate immune DNA-sensing pathway is critical for suppressing viral reactivation from latency, a process that promotes viral pathogenesis and transmission. We report that barrier-to-autointegration factor 1 (BAF)-mediated suppression of the cGAS-STING signaling pathway is necessary for reactivation of KSHV and EBV. We demonstrate a role for BAF in destabilizing cGAS expression and show that inhibiting BAF expression in latently infected, reactivating, or uninfected cells leads to increased type I interferon-mediated antiviral responses and decreased viral replication. Furthermore, BAF overexpression resulted in decreased cGAS expression at the protein level. These results establish BAF as a key regulator of the lifecycle of gammaherpesviruses and a potential target for treating viral infections and malignancies. Barrier-to-autointegration factor 1 (BAF) is a DNA binding protein involved in numerous pathways including transcriptional regulation, DNA damage response and nuclear assembly. Here, Broussard and colleagues characterise its role in gammaherpesvirus reactivation. [ABSTRACT FROM AUTHOR]

Although China has been the main manufacturer and consumer of phthalate esters (PAEs), human health ambient water quality criteria (AWQCs) have not been proposed for these chemicals. In this study, the distribution and bioaccumulation of six PAEs (dimethyl phthalate (DMP), diethyl phthalate (DEP), di-n-butyl phthalate (DBP), butyl benzyl phthalate (BBP), bis (2-ethylhexyl) phthalate (DEHP), and di-n-octyl phthalate (DnOP)) were investigated in 11 edible fish species collected from Poyang Lake, China. The results showed that the total concentrations of the six PAEs in the fish ranged between 118.63 and 819.84 μg/kg wet weight (mean of 327.50 ± 190.44 μg/kg). DMP, DEP, DBP, and DEHP were detected in all samples, of which DEHP and DBP were two of the most predominant phthalates, accounting for more than 90% of the total PAEs. The DEHP concentrations in fish with different habitat preferences were different, demersal species were significantly higher than pelagic species (p < 0.05). The mean natural logarithmic bioaccumulation factors (log BAFs) of PAEs increased with increasing lipophilicity of the substances, which yielded the following regression equation: log BAF (L/kg) = 0.103 log Kow + 2.158 (r2 = 0.940, p < 0.05, n = 4). Using this quantitative structure–activity relationship to calculate BAFs for the remaining undetected substances (BBP and DnOP) to derive AWQCs. According to the natural parameters, the human health AWQCs relating to PAE concentrations for water and fish consumption were derived as 9.4 × 103 (DMP), 5.0 × 102 (DEP), 4.2 × 101 (DBP), 1.1 (BBP), 8.6 × 10− 2 (DEHP), and 2.0 (DnOP) μg/L. Human health risk assessment indicated that the dietary intake of DEHP may exert a carcinogenic effect on residents of the Poyang Lake region. The results provide important input to assess the health risk posed by PAEs contaminated surface water. [ABSTRACT FROM AUTHOR]

Mutations in DNAJC5/CSPα are associated with adult neuronal ceroid lipofuscinosis (ANCL), a dominant-inherited neurodegenerative disease featuring lysosome-derived autofluorescent storage materials (AFSMs) termed lipofuscin. Functionally, DNAJC5 has been implicated in chaperoning synaptic proteins and in misfolding-associated protein secretion (MAPS), but how DNAJC5 dysfunction causes lipofuscinosis and neurodegeneration is unclear. Here we report two functionally distinct but coupled chaperoning activities of DNAJC5, which jointly regulate lysosomal homeostasis: While endolysosome-associated DNAJC5 promotes ESCRT-dependent microautophagy, a fraction of perinuclear and non-lysosomal DNAJC5 mediates MAPS. Functional proteomics identifies a previously unknown DNAJC5 interactor SLC3A2/CD98hc that is essential for the perinuclear DNAJC5 localization and MAPS but dispensable for microautophagy. Importantly, uncoupling these two processes, as seen in cells lacking SLC3A2 or expressing ANCL-associated DNAJC5 mutants, generates DNAJC5-containing AFSMs resembling NCL patient-derived lipofuscin and induces neurodegeneration in a Drosophila ANCL model. These findings suggest that MAPS safeguards microautophagy to avoid DNAJC5-associated lipofuscinosis and neurodegeneration. Abbreviations: 3-MA: 3-methyladenine; ACTB: actin beta; AFSM: autofluorescent storage materials; ANCL: adult neuronal ceroid lipofuscinosis; Baf. A1: bafilomycin A1; CLN: ceroid lipofuscinosis neuronal; CLU: clusterin; CS: cysteine string domain of DNAJC5/CSPα; CUPS: compartment for unconventional protein secretion; DN: dominant negative; DNAJC5/CSPα: DnaJ heat shock protein family (Hsp40) member C5; eMI: endosomal microautophagy; ESCRT: endosomal sorting complex required for transport; GFP: green fluorescent protein; HSPA8/HSC70: heat shock protein family A (Hsp70) member 8; INCL: infant neuronal ceroid lipofuscinosis; JNCL: juvenile neuronal ceroid lipofuscinosis; KO: knockout; LAMP1: lysosomal associated membrane protein 1; LAPTM4B: lysosomal protein transmembrane 4 beta; LN: linker domain of DNAJC5/CSPα; MAPS: misfolding-associated protein secretion; mCh/Ch: mCherry; mCi/Ci: mCitrine; MTOR: mechanistic target of rapamycin kinase; NCL: neuronal ceroid lipofuscinosis; PPT1: palmitoyl-protein thioesterase 1; PQC: protein quality control; SBP: streptavidin binding protein; SGT: small glutamine-rich tetratricopeptide repeat; shRNA: short hairpin RNA; SLC3A2/CD98hc: solute carrier family 3 member 2; SNCA/α-synuclein: synuclein alpha; TMED10: transmembrane p24 trafficking protein 10; UV: ultraviolet; VPS4: vacuolar protein sorting 4 homolog; WT: wild type. [ABSTRACT FROM AUTHOR]

BAF and PBAF are mammalian SWI/SNF family chromatin remodeling complexes that possess multiple histone/DNA-binding subunits and create nucleosome-depleted/free regions for transcription activation. Despite previous structural studies and recent advance of SWI/SNF family complexes, it remains incompletely understood how PBAF-nucleosome complex is organized. Here we determined structure of 13-subunit human PBAF in complex with acetylated nucleosome in ADP-BeF3-bound state. Four PBAF-specific subunits work together with nine BAF/PBAF-shared subunits to generate PBAF-specific modular organization, distinct from that of BAF at various regions. PBAF-nucleosome structure reveals six histone-binding domains and four DNA-binding domains/modules, the majority of which directly bind histone/DNA. This multivalent nucleosome-binding pattern, not observed in previous studies, suggests that PBAF may integrate comprehensive chromatin information to target genomic loci for function. Our study reveals molecular organization of subunits and histone/DNA-binding domains/modules in PBAF-nucleosome complex and provides structural insights into PBAF-mediated nucleosome association complimentary to the recently reported PBAF-nucleosome structure. BAF and PBAF are SWI/SNF family chromatin remodeling complexes that create nucleosome-depleted regions for transcription activation. Here the authors report the structure of a 13-subunit human PBAF in complex with acetylated nucleosome in ADP-BeF3-bound state that provides structural insights into PBAF-mediated nucleosome association. [ABSTRACT FROM AUTHOR]

Haemoglobinopathies, including thalassaemias and sickle-cell syndromes, are demanding, lifelong conditions that pose a significant burden to patients, families, and healthcare systems. Despite the therapeutic advances and the resulting improvements in prognosis accomplished in past decades, these patients still face important challenges, including suboptimal access to quality care in areas with developing economies, changing epidemiology due to massive migration flows, an evolving clinical spectrum due to ageing in well-treated patients, and limited access to novel high-cost therapies. We herein describe the organization of healthcare services for haemoglobinopathies in Cyprus--with particular focus on beta-thalassaemia, the most prevalent condition in this region--along with selected patient outcomes. This report aims at underscoring the fact that nationally funded and well-coordinated prevention and care programmes for chronic and complex conditions, such as haemoglobinopathies, with active involvement from patient organizations lead to effective disease control and excellent outcomes in survival, quality of life, social adaptation, and public health savings, and allow timely and effective responses to emerging crises, such as the COVID-19 pandemic. The Cyprus paradigm could therefore serve as a blueprint for the organization or adaptation of haemoglobinopathy programs in other countries since these disorders are still widely occurring. [ABSTRACT FROM AUTHOR]

Double-PHD fingers 3 (DPF3) is a BAF-associated human epigenetic regulator, which is increasingly recognised as a major contributor to various pathological contexts, such as cardiac defects, cancer, and neurodegenerative diseases. Recently, we unveiled that its two isoforms (DPF3b and DPF3a) are amyloidogenic intrinsically disordered proteins. DPF3 isoforms differ from their C-terminal region (C-TERb and C-TERa), containing zinc fingers and disordered domains. Herein, we investigated the disorder aggregation properties of C-TER isoforms. In agreement with the predictions, spectroscopy highlighted a lack of a highly ordered structure, especially for C-TERa. Over a few days, both C-TERs were shown to spontaneously assemble into similar antiparallel and parallel β-sheet-rich fibrils. Altered metal homeostasis being a neurodegeneration hallmark, we also assessed the influence of divalent metal cations, namely Cu2+, Mg2+, Ni2+, and Zn2+, on the C-TER aggregation pathway. Circular dichroism revealed that metal binding does not impair the formation of β-sheets, though metal-specific tertiary structure modifications were observed. Through intrinsic and extrinsic fluorescence, we found that metal cations differently affect C-TERb and C-TERa. Cu2+ and Ni2+ have a strong inhibitory effect on the aggregation of both isoforms, whereas Mg2+ impedes C-TERb fibrillation and, on the contrary, enhances that of C-TERa. Upon Zn2+ binding, C-TERb aggregation is also hindered, and the amyloid autofluorescence of C-TERa is remarkably red-shifted. Using electron microscopy, we confirmed that the metal-induced spectral changes are related to the morphological diversity of the aggregates. While metal-treated C-TERb formed breakable and fragmented filaments, C-TERa fibrils retained their flexibility and packing properties in the presence of Mg2+ and Zn2+ cations. [ABSTRACT FROM AUTHOR]

The two-meter-long DNA is compressed into chromatin in the nucleus of every cell, which serves as a significant barrier to transcription. Therefore, for processes such as replication and transcription to occur, the highly compacted chromatin must be relaxed, and the processes required for chromatin reorganization for the aim of replication or transcription are controlled by ATP-dependent nucleosome remodelers. One of the most highly studied remodelers of this kind is the BRG1- or BRM-associated factor complex (BAF complex, also known as SWItch/sucrose non-fermentable (SWI/SNF) complex), which is crucial for the regulation of gene expression and differentiation in eukaryotes. Chromatin remodeling complex BAF is characterized by a highly polymorphic structure, containing from four to 17 subunits encoded by 29 genes. The aim of this paper is to provide an overview of the role of BAF complex in chromatin remodeling and also to use literature mining and a set of computational and bioinformatics tools to analyze structural properties, intrinsic disorder predisposition, and functionalities of its subunits, along with the description of the relations of different BAF complex subunits to the pathogenesis of various human diseases. [ABSTRACT FROM AUTHOR]

Fiber-based mid-infrared (MIR) supercontinuum (SC) sources benefit from their spectral brightness and spatial coherence that are needed for many applications, such as spectroscopy and metrology. In this paper, an SC spanning from to is demonstrated in cascaded ZrF4–BaF2–LaF3–AlF3–NaF (ZBLAN) and As2Se3 step-index fibers. The pump source is a ZBLAN fiber-based MIR SC laser with abundant high-peak-power soliton pulses between 3000 nm and 4200 nm. By concatenating the ZBLAN fiber and the As2Se3 fiber, efficient cascading red-shifts are obtained in the normal dispersion region of the As2Se3 fiber. The spectral behavior of cascaded SC generation shows that the long-wavelength proportion of MIR SC generated in the ZBLAN fiber plays a critical role for further spectral extension in the As2Se3 fiber. [ABSTRACT FROM AUTHOR]