Search

Selection, both natural and artificial, leaves patterns on the genome during domestication of animals and leads to changes in allele frequencies among populations. Detecting genomic regions influenced by selection in livestock may assist in understanding the processes involved in genome evolution and discovering genomic regions related to traits of economic and ecological interests. In the current study, genetic diversity analyses were conducted on 34,206 quality‐filtered SNP positions from 450 individuals in 15 sheep breeds, including six indigenous breeds from the Middle East, namely Iranian Balouchi, Afshari, Moghani, Qezel, Karakas and Norduz, and nine breeds from Europe, namely East Friesian Sheep, Ile de France, Mourerous, Romane, Swiss Mirror, Spaelsau, Suffolk, Comisana and Engadine Red Sheep. The SNP genotype data generated by the Illumina OvineSNP50 Genotyping BeadChip array were used in this analysis. We applied two complementary statistical analyses, FST (fixation index) and xp‐EHH (cross‐population extended haplotype homozygosity), to detect selection signatures in Middle Eastern and European sheep populations. FST and xp‐EHH detected 629 and 256 genes indicating signatures of selection, respectively. Genomic regions identified using FST and xp‐EHH contained the CIDEA, HHATL, MGST1, FADS1, RTL1 and DGKG genes, which were reported earlier to influence a number of economic traits. Both FST and xp‐EHH approaches identified 60 shared genes as the signatures of selection, including four candidate genes (NT5E, ADA2, C8A and C8B) that were enriched for two significant Gene Ontology (GO) terms associated with the adenosine metabolic procedure. Knowledge about the candidate genomic regions under selective pressure in sheep breeds may facilitate identification of the underlying genes and enhance our understanding on these genes role in local adaptation. [ABSTRACT FROM AUTHOR]

In this study, a comparative analysis was presented to detect the quota of urban and rural areas from total greenhouse gas (GHG) emissions in 26 selected countries of the Middle East and Central Asia (MECA) during 1994–2014. For this purpose, 18 independent variables such as land area, population characteristics, energy use and consumption, gross domestic product (GDP), CO2 emissions, etc., were considered in addition to one dependent variable of total GHG emissions. Statistical modeling to investigate GHG emissions was constructed comprising the quantitative procedures of the correlation test and clustering analysis, which can be considered as the fundamental basis of each econometric analysis. The GHG emissions from the urban (rural) sector of total countries in 2014 were obtained as 3313.4 (1135.6) Mt of CO2 equivalents, which is about 74.5% (25.5%) of the total GHG emissions (4449.1 Mt of CO2 equivalents) in the MECA region. The correlation test between GHG emissions and urban indicators revealed the significant records (R from 0.745 to 0.981) compared with rural indicators (R from 0.337 to 0.890). Based on the clustering analysis of the countries, Cluster A, comprised of three countries of Iran, Saudi Arabia, and Turkey, was categorized as countries with very high contributing to the total GHG emissions in the MECA region (~ 43.3%). The quotas of emissions from urban and rural sectors in the Cluster A were estimated as 83.1% and 16.9% from the total GHG emissions in 2014 (1921.3 Mt of CO2), while the same quotas were predicted as 73.1% and 26.9% from the total GHG emissions in 2030 (1921.3 Mt of CO2). This study carried out comprehensive research on the GHG emissions from the urban and rural areas in a crucial region of the world, which is faced with the rising growth of population, urbanization, globalization, high-energy use, and fuel consumption. [ABSTRACT FROM AUTHOR]