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Aim Conservation plans often struggle to account for connectivity in spatial prioritization approaches for the protection of migratory species. Protection of such species is challenging because their movements may be uncertain and variable, span vast distances, cross international borders and traverse land and sea habitats. Often we are faced with small samples of information from various sources and the collection of additional data can be costly and time-consuming. Therefore it is important to evaluate what degree of spatial information provides sufficient results for directing management actions. Here we develop and evaluate an approach that incorporates habitat and movement information to advance the conservation of migratory species. We test our approach using information on threatened loggerhead sea turtles ( C aretta caretta) in the Mediterranean. Location The Mediterranean Sea. Methods We use Marxan, a spatially explicit decision support tool, to select priority conservation areas. Four approaches with increasing amounts of information about the loggerhead sea turtle are compared, ranging from (1) the broad distribution, (2) multiple habitat types that represent foraging, nesting and inter-nesting habitats, (3) mark-recapture movement information to (4) telemetry-derived migration tracks. Results We find that spatial priorities for sea turtle conservation are sensitive to the information used in the prioritization process. Setting conservation targets for migration tracks altered the location of conservation priorities, indicating that conservation plans designed without such data would miss important sea turtle habitat. We discover that even a small number of tracks make a significant contribution to a spatial conservation plan if those tracks are substantially different. Main conclusions This study presents a novel approach to improving spatial prioritization for conserving migratory species. We propose that future telemetry studies tailor their efforts towards conservation prioritization needs, meaning that spatially dispersed samples rather than just large numbers should be obtained. This work highlights the valuable information that telemetry research contributes to the conservation of migratory species. [ABSTRACT FROM AUTHOR]