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With five currently recognized species that form several secondary contact zones, slow worms (Anguidae: Anguis) offer a valuable model to study the fate of evolutionary lineages in the face of hybridization and genetic introgression. The relationships between the Western Slow Worm Anguis fragilis and the Italian Slow Worm Anguis veronensis are particularly puzzling. Their respective distributions remain poorly known on the edges of their parapatric ranges, as both species lack external differentiation. Contra earlier mitochondrial phylogenies, new phylogenomic inferences have shown that A. fragilis and A. veronensis are sister taxa, thus casting doubts on their specific status. In this study, we analyze the A. fragilis / veronensis transition in southeastern France, based on one mitochondrial (ND2) and two nuclear (PRLR and HA1) genetic markers in 81 specimens from 61 localities. The ranges of A. fragilis and A. veronensis roughly extends northwest and southeast of the Rhône-Durance valleys, respectively, with clear signs of introgressive hybridization in the areas of contact (notably the eastern parts of the lower Rhône valley). Based on the three molecular markers analyzed, gene flow does not seem to reach outside the narrow hybrid zone, which likely indicates (incomplete) intrinsic reproductive isolation. Hence, we provisionally suggest maintaining A. veronensis as a separate species from A. fragilis. More generally, patterns of genetic divergence, external differentiation, and hybridization (both historical and contemporary) in Anguis ssp. supports a speciation continuum spanning from cryptic, genetically compatible alloparapatric lineages to phenotypically distinct, deeply diverged and fully reproductively isolated taxa able to coexist in sympatry. [ABSTRACT FROM AUTHOR]

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In the south of France, the so-called climate hiatus from 1998 to 2013 was associated with a late winter cooling which has affected the phenology of several reptiles and amphibian species, delaying their dates of first appearances in spring. This episode has been related to a period of frequently negative values of the North Atlantic Oscillation index (NAOi). The recent increase of this index after this episode marks the end of the "hiatus" and provides an opportunity to verify the impact of the North Atlantic Oscillation (NAO) on the fauna of the North Mediterranean region. Most of the emergence dates of amphibians and reptiles in spring have rapidly advanced from 1983 to 1997 and then receded or stabilized from 1998 to 2010. They began to advance again since 2010. These phenological changes covary with the temperature of February–March in the study area, which is itself related to the variations of the NAO index. These changes confirm the influence of the NAO on the phenology of terrestrial organisms in northern Mediterranean where its influence is sometimes assumed to be attenuated. [ABSTRACT FROM AUTHOR]

The ocellated lizard Timon lepidus (Sauria; Lacertidae) has declined throughout most of its range. Habitat fragmentation and habitat loss seem to be mainly responsible for the species' decline. The ocellated lizard population of Oleron Island, confined to a longshore dune of 140 ha, is the subject of a long-term monitoring study established in 2007. The monitoring method consists of 70 plots (50 × 50 m) randomly placed within a study area divided into six distinct zones. Three surveys were conducted in the study area over the spring season of 2007. During each survey, we counted the individuals in each plot. These counts were analyzed with the PRESENCE 2.0 and the R package Unmarked software using two different modeling approaches, the 'site-occupancy model' and the 'N-mixture model'. Estimates resulting from our analyses indicated the proportion of occupied plots to be 0.76. Our results indicated that the ocellated lizard has a highly heterogeneous distribution on Oleron Island, with parts of the dune sheltering clusters of lizards, and other areas totally unoccupied. The population size was estimated to be 516 individuals (95% CI 248-783). The relative abundance of ocellated lizards on the island can be principally explained by the presence of permanent shelters (used both during winter and the lizards' active period), including rabbit and rodent burrows and artificial shelters. This monitoring survey will be replicated every three years to enable us to calculate the species' colonization and local extinction probabilities. These results will help in evaluating and guiding management and conservation measures. [ABSTRACT FROM AUTHOR]

Copyright of Natures Sciences Sociétés is the property of EDP Sciences and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Over a period of two years we used radiology to investigate breeding traits in females of two western populations of the threatened Hermann's tortoise Testudo hermanni hermanni. The main purpose of the study was to see if reproductive traits – clutch size, clutch frequency, annual egg production and egg width – varied between populations in Corsica (France) and the Ebro Delta (Spain), and if these traits were affected by female body size and amounts of spring rainfall. All the breeding traits analysed were greater in the Corsican population than in the Ebro Delta population. These differences were also significant when we used female body size as a covariable. In both populations the amount of spring rainfall affected breeding traits but not clutch size. Nevertheless, only in the Corsican population did clutch frequency, annual egg production and egg width increase significantly in the year with a wet spring. Contrary to the predictions of Optimal Propagule Size theory, we found that egg size and clutch size increased with female size, and that both variables were independent. On the other hand, clutch frequency was not related to female body size. Thus, in the Hermann's tortoise, as clutch size did not change between years and clutch frequency was independent of female size, all females are able to increase their reproductive output in years with favourable conditions by increasing their clutch frequency. Nevertheless, other factors besides female size and rainfall may influence in a highly complex way variability in breeding traits among populations. [ABSTRACT FROM AUTHOR]

We investigated long term changes in an amphibian community in the Languedoc area of Southern France by comparing results of a survey of 56 ponds made in the early 1970s with results of a survey of the same localities in 2001. Based on the frequency of new occurrences and disappearances of species in the sample ponds, there is no sign of a general decline of amphibians in this area. Most species showed non-significant variation in frequency of occurrence or had increased. “Green frogs” (Rana perezi/ridibunda/kl. grafi) showed clear signs of decline, but this is a local phenomenon rather than a decline at the regional scale. Pelodytes punctatus probably declined also, possibly due to its sensitivity to fish introduction. The species richness in the ponds has also remained stable except in ponds where fish have been introduced. The only adverse impact of human activities that we could detect was thus the introduction of fish, which had a significantly adverse effect on amphibian species richness. [Copyright &y& Elsevier]

Historical factors, current population size, population connectivity and selective processes at linked loci contribute to shaping contemporary patterns of neutral genetic diversity. It is now widely acknowledged that nuclear and mitochondrial markers react differently to current demography as well as to past history, so the use of both types of markers is often advocated to gain insight on both historical and contemporary processes. We used 12 microsatellite loci genotyped in 13 populations of a mountain lizard (Iberolacerta bonnali) to test whether the historical scenario favoured by a previous mitochondrial study was also supported by nuclear markers and thereby evaluated the consequences of postglacial range movements on nuclear diversity. Congruent signals of recent history were revealed by nuclear and mitochondrial markers using an Approximate Bayesian computation approach, but contemporary patterns of mtDNA and nuclear DNA diversity were radically different. Although dispersal in this species is probably highly restricted at all spatial scales, colonization abilities have been historically good, suggesting capability for reestablishment of locally extinct populations except in fully disconnected habitats., (© 2014 John Wiley & Sons Ltd.)

The Orsini's viper (Vipera ursinii) is one of the most threatened snakes in Europe due to its highly fragmented distribution and specific open environment (steppic habitat) requirement. French populations are isolated on top of mountain massifs of the southern Prealps/Alps. Mitochondrial sequences (cytochrome b) and 6 microsatellite loci have been used to estimate the levels of genetic diversity and isolation within and among 11 French fragmented populations (a total of 157 individuals). Eleven cytochrome b haplotypes with a limited divergence were observed (mean divergence between haplotypes: 0.31%). However, we detected considerable genetic differentiation among populations (global F(ST) = 0.76 and 0.26 for mitochondrial and nuclear DNA, respectively). Results indicate that 3 populations possibly went through a bottleneck and 1 population showed low genetic diversity compared with the others. Although a significant isolation by distance was detected for both markers, strong differentiation was also observed between geographically close populations, probably due to the ragged landscape that constitutes a serious barrier to gene flow owing to the limited dispersal capability of the viper. Despite some discrepancies between the 2 markers, 8 Management Units have been identified and should be considered for future management projects.

Within the current context of biodiversity loss a number of biodiversity indicators have been developed to help measure the state of nature and how it is changing. However, most indicators are derived from bird populations. Reptiles and amphibians could be useful ecosystem indicators, but this requires obtaining precise and unbiased population parameters. This is a particularly challenging task for these two groups of species, because individuals are extremely difficult to detect for various reasons. We illustrate the use of a sampling and analytical method that explicitly takes into account imperfect detection to assess the population dynamics of a reptile species and its temporal and spatial variation. European pond turtles (Emys orbicularis) were sampled at two different locations during a 10-year study. The two sites differed by their water management regimes and number of livestock. At each site and for each sex, the data were modeled using a robust design capture-mark-recapture framework to obtain and compare estimates of survival, temporary emigration, time-specific abundance, density, and population growth rate, while taking into account effects of individual heterogeneity, trap-response, and time on capture probabilities. Temporary emigration was higher in males (0.344 +/- 0.046) (mean +/- SE) than in females (0.228 +/- 0.071), did not differ between sites for each sex, and was mainly Markovian. Apparent adult survival was higher in females (0.966 +/- 0.031) than in males (0.864 +/- 0.024), and was negatively related to the proportion of individuals with repaired shell fractures in the population. Average density was 63.7 +/- 6.6 turtles/km2 but was higher for females (39.2 +/- 14.0 females/km2) than for males (23.5 +/- 5.7 males/km2). The population sizes of males and females decreased where long periods of artificial drought and the highest density of livestock occurred. This research highlights differences in demographic parameters according to sex and site in a turtle species, and it provides evidence that significant human-induced disturbance represents a potential risk to European pond turtle populations. The sampling and analytical approaches illustrated in this study are applicable to many other species of reptiles and amphibians, and estimated population parameters could be combined to produce population indicators useful for conservation and management.