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2. North Asia target market; Grass-fed beef finds favour in Asia
- Author
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Stringleman, Hugh
- Published
- 2005
3. Operating in Asia : the evidence from case studies
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Stringer, Christina A and Haworth, Nigel
- Published
- 2003
4. Asia crisis presents new opportunities
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Stringleman, Hugh
- Published
- 1998
5. SPORT : Mission impossible
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Stratford, Trish
- Published
- 1988
6. Impact of global environmental changes on the range contraction of Eurasian moose since the Late Pleistocene.
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Niedziałkowska M, Górny M, Gornia J, Popović D, Baca M, Ratajczak-Skrzatek U, Kovalchuk O, Sykut M, Suska-Malawska M, Mackiewicz P, Hofman-Kamińska E, Kowalczyk R, Czarniauski M, Pawłowska K, Makowiecki D, Tataurova L, Bondarev A, Shpansky A, Protopopov AV, Sorokin AD, Saarma U, Kosintsev P, Schmölcke U, Wilczyński J, Lipecki G, Nadachowski A, Boeskorov GG, Baryshnikov GF, Zorzin R, Vorobiova N, Moskvitina NS, Leshchinskiy S, Malikov D, Berdnikov IM, Balasescu A, Boroneant A, Klementiev A, Fyfe R, Woodbridge J, and Stefaniak K
- Subjects
- Animals, Europe, Animal Distribution, Asia, Ecosystem, Deer physiology, Climate Change
- Abstract
Climatic oscillations are considered primary factors influencing the distribution of various life forms on Earth. Large species adapted to cold climates are particularly vulnerable to extinction due to climate changes. In our study, we investigated whether temperature increase since the Late Pleistocene and the contraction of environmental niche during the Holocene were the main factors contributing to the decreasing range of moose (Alces alces) in Europe. We also examined whether there were significant differences in environmental conditions between areas inhabited by moose in Europe and Asia, that could support the division of moose into western and eastern forms, as suggested by genetic and morphological data. We analysed environmental conditions in the locations of 655 subfossil and modern moose occurrences over the past 50,000 years in Eurasia. We found that the most limiting climatic factor for the moose distribution since the Late Pleistocene was July temperature. More than 90 % of moose records were found in areas where mean summer temperature was below 19 °C, with July temperatures showing over 3 times narrower interquartile range compared to January temperatures. We identified significant differences in environmental conditions between areas inhabited by the European and Asiatic moose. In Europe, the species occurred in regions with milder climates, higher primary productivity, and more frequently within forest biomes compared to Asiatic individuals. The moose range shifted more in the west-east than in the south-north direction during the Holocene climate warming in Europe. We conclude that although the area of suitable moose habitat has increased since 12-8 ka years BP, as demonstrated by environmental niche modeling, the retreat of A. alces in large areas of Europe was likely caused by anthropogenic landscape change (e.g., deforestation) and overhunting by humans during the late Holocene rather than by climate warming during the Pleistocene to Holocene transition., Competing Interests: Declaration of competing interest Due to the Ukrainian laws established since the Russian invasion in February 2022, Ukrainian scientists employed in the Ukrainian institutions are not allowed to be included as co-authors in the same papers with Russian researchers. That is why the name of professor Bogdan Ridush from the Yuriy Fedkovych Chernivtsi National University in Ukraine, who participated in this study, based on his request, has been excluded from the list of authors and moved to the Acknowledgements., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)
- Published
- 2024
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7. 2024 European Heart Rhythm Association/Heart Rhythm Society/Asia Pacific Heart Rhythm Society/Latin American Heart Rhythm Society expert consensus statement on catheter and surgical ablation of atrial fibrillation.
- Author
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Tzeis S, Gerstenfeld EP, Kalman J, Saad EB, Shamloo AS, Andrade JG, Barbhaiya CR, Baykaner T, Boveda S, Calkins H, Chan NY, Chen M, Chen SA, Dagres N, Damiano RJ, De Potter T, Deisenhofer I, Derval N, Di Biase L, Duytschaever M, Dyrda K, Hindricks G, Hocini M, Kim YH, la Meir M, Merino JL, Michaud GF, Natale A, Nault I, Nava S, Nitta T, O'Neill M, Pak HN, Piccini JP, Pürerfellner H, Reichlin T, Saenz LC, Sanders P, Schilling R, Schmidt B, Supple GE, Thomas KL, Tondo C, Verma A, and Wan EY
- Subjects
- Humans, Asia, Europe, Latin America, Societies, Medical standards, Atrial Fibrillation surgery, Atrial Fibrillation physiopathology, Catheter Ablation methods, Catheter Ablation standards, Consensus
- Abstract
In the last three decades, ablation of atrial fibrillation (AF) has become an evidence-based safe and efficacious treatment for managing the most common cardiac arrhythmia. In 2007, the first joint expert consensus document was issued, guiding healthcare professionals involved in catheter or surgical AF ablation. Mounting research evidence and technological advances have resulted in a rapidly changing landscape in the field of catheter and surgical AF ablation, thus stressing the need for regularly updated versions of this partnership which were issued in 2012 and 2017. Seven years after the last consensus, an updated document was considered necessary to define a contemporary framework for selection and management of patients considered for or undergoing catheter or surgical AF ablation. This consensus is a joint effort from collaborating cardiac electrophysiology societies, namely the European Heart Rhythm Association, the Heart Rhythm Society, the Asia Pacific Heart Rhythm Society, and the Latin American Heart Rhythm Society., Competing Interests: Data availability No new data were generated or analyzed in support of this research., (Copyright © 2024. Published by Elsevier Inc.)
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- 2024
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8. Traditional multilocus phylogeny fails to fully resolve Palearctic ground squirrels (Spermophilus) relationships but reveals a new species endemic to West Siberia.
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Simonov E, Lopatina NV, Titov SV, Ivanova AD, Brandler OV, Surin VL, Matrosova VA, Dvilis AE, Oreshkova NV, Kapustina SY, Golenishchev FN, and Ermakov OA
- Subjects
- Animals, Siberia, Phylogeny, Asia, Sciuridae genetics, Genetic Introgression
- Abstract
Previous efforts to reconstruct evolutionary history of Palearctic ground squirrels within the genus Spermophilus have primarily relied on a single mitochondrial marker for phylogenetic data. In this study, we present the first phylogeny with comprehensive taxon sampling of Spermophilus via a conventional multilocus approach utilizing five mitochondrial and five nuclear markers. Through application of the multispecies coalescent model, we constructed a species tree revealing four distinct clades that diverged during the Late Miocene. These clades are 1) S. alaschanicus and S. dauricus from East Asia; 2) S. musicus and S. pygmaeus from East Europe and northwestern Central Asia; 3) the subgenus Colobotis found across Central Asia and its adjacent regions and encompassing S. brevicauda, S. erythrogenys, S. fulvus, S. major, S. pallidicauda, S. ralli, S. relictus, S. selevini, and S. vorontsovi sp. nov.; and 4) a Central/Eastern Europe and Asia Minor clade comprising S. citellus, S. taurensis, S. xanthoprymnus, S. suslicus, and S. odessanus. The latter clade lacked strong support owing to uncertainty of taxonomic placement of S. odessanus and S. suslicus. Resolving relationships within the subgenus Colobotis, which radiated rapidly, remains challenging likely because of incomplete lineage sorting and introgressive hybridization. Most of modern Spermophilus species diversified during the Early-Middle Pleistocene (2.2-1.0 million years ago). We propose a revised taxonomic classification for the genus Spermophilus by recognizing 18 species including a newly identified one (S. vorontsovi sp. nov.), which is found only in a limited area in the southeast of West Siberia. Employing genome-wide single-nucleotide polymorphism genotyping, we substantiated the role of the Ob River as a major barrier ensuring robust isolation of this taxon from S. erythrogenys. Despite its inherent limitations, the traditional multilocus approach remains a valuable tool for resolving relationships and can provide important insights into otherwise poorly understood groups. It is imperative to recognize that additional efforts are needed to definitively determine phylogenetic relationships between certain species of Palearctic ground squirrels., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Inc. All rights reserved.)
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- 2024
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9. Shaping a greener future: The role of geopolitical risk, renewable energy and financial development on environmental sustainability using the LCC hypothesis.
- Author
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Wang W, Balsalobre-Lorente D, Anwar A, Adebayo TS, Cong PT, Quynh NN, and Nguyen MQ
- Subjects
- Reproducibility of Results, Asia, Renewable Energy, Economic Development, Carbon Dioxide, Climate Change, Policy
- Abstract
The recent progress report of Sustainable Development Goals (SDG) 2023 highlighted the extreme reactions of environmental degradation. This report also shows that the current efforts for achieving environmental sustainability (SDG 13) are inadequate and a comprehensive policy agenda is needed. However, the present literature has highlighted several determinants of environmental degradation but the influence of geopolitical risk on environmental quality (EQ) is relatively ignored. To fill this research gap and propose a inclusive policy structure for achieving the sustainable development goals. This study is the earliest attempt that delve into the effects o of geopolitical risk (GPR), financial development (FD), and renewable energy consumption (REC) on load capacity factor (LCF) under the framework of load capacity curve (LCC) hypothesis for selected Asian countries during 1990-2020. In this regard, we use several preliminary sensitivity tests to check the features and reliability of the dataset. Similarly, we use panel quantile regression for investigating long-run relationships. The factual results affirm the existence of the LCC hypothesis in selected Asian countries. Our findings also show that geopolitical risk reduces environmental quality whereas financial development and REC increase environmental quality. Drawing from the empirical findings, this study suggests a holistic policy approach for achieving the targets of SDG 13 (climate change)., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)
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- 2024
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10. Experience and impact of stigma in people with chronic hepatitis B: a qualitative study in Asia, Europe, and the United States.
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Toumi M, Wallace J, Cohen C, Marshall C, Kitchen H, Macey J, Pegram H, Slagle AF, Gish RG, Ning Q, Yatsuhashi H, Cornberg M, Brunetto M, van Bömmel F, Xie Q, Lee D, Habuka N, Sbarigia U, Beumont-Mauviel M, Keever AV, Takahashi Y, Lu Y, Liu A, Chen Q, Ito T, Radunz O, Puggina A, Hilgard G, Chan EKH, and Wang S
- Subjects
- Adult, Humans, United States epidemiology, Quality of Life, Social Stigma, Asia, Europe, Hepatitis B, Chronic psychology, Hepatitis B psychology
- Abstract
Background: People with chronic hepatitis B (CHB) commonly experience social and self-stigma. This study sought to understand the impacts of CHB-related stigma and a functional cure on stigma., Methods: Adults with CHB with a wide range of age and education were recruited from 5 countries and participated in 90-minute qualitative, semi-structured interviews to explore concepts related to CHB-associated stigma and its impact. Participants answered open-ended concept-elicitation questions regarding their experience of social and self-stigma, and the potential impact of reduced CHB-related stigma., Results: Sixty-three participants aged 25 to 71 years (15 from the United States and 12 each from China, Germany, Italy, and Japan) reported emotional, lifestyle, and social impacts of living with CHB, including prejudice, marginalization, and negative relationship and work experiences. Self-stigma led to low self-esteem, concealment of CHB status, and social withdrawal. Most participants stated a functional cure for hepatitis B would reduce self-stigma., Conclusions: CHB-related social and self-stigma are widely prevalent and affect many aspects of life. A functional cure for hepatitis B may reduce social and self-stigma and substantially improve the health-related quality of life of people with CHB. Incorporating stigma into guidelines along with infectivity considerations may broaden the patient groups who should receive treatment., (© 2024. The Author(s).)
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- 2024
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11. Analysis of >3400 worldwide eggplant accessions reveals two independent domestication events and multiple migration-diversification routes.
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Barchi L, Aprea G, Rabanus-Wallace MT, Toppino L, Alonso D, Portis E, Lanteri S, Gaccione L, Omondi E, van Zonneveld M, Schafleitner R, Ferrante P, Börner A, Stein N, Díez MJ, Lefebvre V, Salinier J, Boyaci HF, Finkers R, Brouwer M, Bovy AG, Rotino GL, Prohens J, and Giuliano G
- Subjects
- Domestication, Fruit genetics, Asia, Solanum melongena genetics, Solanum lycopersicum
- Abstract
Eggplant (Solanum melongena) is an important Solanaceous crop, widely cultivated and consumed in Asia, the Mediterranean basin, and Southeast Europe. Its domestication centers and migration and diversification routes are still a matter of debate. We report the largest georeferenced and genotyped collection to this date for eggplant and its wild relatives, consisting of 3499 accessions from seven worldwide genebanks, originating from 105 countries in five continents. The combination of genotypic and passport data points to the existence of at least two main centers of domestication, in Southeast Asia and the Indian subcontinent, with limited genetic exchange between them. The wild and weedy eggplant ancestor S. insanum shows admixture with domesticated S. melongena, similar to what was described for other fruit-bearing Solanaceous crops such as tomato and pepper and their wild ancestors. After domestication, migration and admixture of eggplant populations from different regions have been less conspicuous with respect to tomato and pepper, thus better preserving 'local' phenotypic characteristics. The data allowed the identification of misclassified and putatively duplicated accessions, facilitating genebank management. All the genetic, phenotypic, and passport data have been deposited in the Open Access G2P-SOL database, and constitute an invaluable resource for understanding the domestication, migration and diversification of this cosmopolitan vegetable., (© 2023 The Authors. The Plant Journal published by Society for Experimental Biology and John Wiley & Sons Ltd.)
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- 2023
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12. The validity of Okun's Law in the case of Central Asia: The role of weather and energy factors.
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Apergis N and Kuziboev B
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- Asia, Weather, Temperature, Renewable Energy, Economic Development, Carbon Dioxide analysis
- Abstract
This study investigates a modified version of the Okun's Law that incorporates energy consumption and temperature for five Central Asian countries, while it employs the ARDL methodology, spanning the period 1995-2018. While the original Okun's Law is not supported, the analysis does find support for the modified Law, suggesting the importance of regional specific factors. The results document the presence of a negative association between unemployment and real GNP both in the short and in the long run. The impact of energy consumption on unemployment is positive in the long run, while the temperature impacts unemployment both in the short and in the long run., (© 2023. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)
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- 2023
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13. Question of agent of camel balantidiosis solved: Molecular identity, taxonomic solution and epidemiological considerations.
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Esteban-Sánchez L, Panayotova-Pencheva M, Qablan M, Modrý D, Hofmannová L, and Ponce-Gordo F
- Subjects
- Cattle, Animals, Humans, Camelus parasitology, Zoonoses epidemiology, Asia, Africa, Balantidiasis veterinary, Cattle Diseases
- Abstract
Domestic camels (Camelus bactrianus, the Bactrian camel; and Camelus dromedarius, the dromedary) are pseudo-ruminant herbivores kept as livestock in rural, inhospitable regions (cold deserts and dry steppes of Asia, arid to semi-arid regions of Africa, western and central Asia). Their close contact with humans makes them a potential reservoir for zoonotic parasite infections, as has been suggested for human balantidiasis. However, there is confusion about the ciliate species that infects camels: Infundibulorium cameli was originally described in dromedaries, but this name has almost never been used and most authors identified their findings as Balantioides coli and, to a lesser extent, Buxtonella sulcata, a cattle ciliate. To clarify the taxonomic status of the parasite and the corresponding zoonotic significance for camels, we performed morphological characterization of cysts and genetic analysis (SSU-rDNA and ITS markers) of B. coli-like isolates from Bactrian camels from Bulgaria and from dromedaries from Spain and the United Arab Emirates. Our results indicate that the camel ciliate is not B. coli, nor is it B. sulcata, but is a different species that should be placed in the same genus as the latter. Thus, camels are not a reservoir for human balantidiasis. Although the correct genus name would be Infundibulorium according to the principle of priority, this would lead to confusion since this name has almost fallen into disuse since its initial description, but Buxtonella is almost universally used by researchers and veterinarians for the cattle ciliate. We therefore propose to apply the reversal of precedence and use Buxtonella as the valid genus name. Consequently, we propose Buxtonella cameli n.comb. as the name for the camel ciliate., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Francisco Ponce-Gordo reports financial support was provided by Research Group on Epidemiology, Diagnosis and Antiparasitic Therapy of the Complutense University (group number 911120)., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)
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- 2023
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14. Phenolic Compounds and Antioxidant and Anti-Enzymatic Activities of Selected Adaptogenic Plants from South America, Asia, and Africa.
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Gębalski J, Małkowska M, Graczyk F, Słomka A, Piskorska E, Gawenda-Kempczyńska D, Kondrzycka-Dąda A, Bogucka-Kocka A, Strzemski M, Sowa I, Wójciak M, Grzyb S, Krolik K, Ptaszyńska AA, and Załuski D
- Subjects
- Polyphenols pharmacology, Africa, Asia, South America, Flavonoids, Acetylcholinesterase, Antioxidants pharmacology, Phenols
- Abstract
Despite the fact that there are many studies related to the adaptogenic and pro-healthy activities of plant-based compounds, there are some adaptogenic plants whose activities are not fully known, especially those coming from the wild regions of Asia, Africa, and South America. The aim of these studies was to examine the contents of non-nutritional compounds, such as polyphenols, flavonoids, and phenolic acids in ten adaptogenic species ( Astragalus membranaceus (AM), Uncaria rhynchophylla (UR), Polygonum multiflorum (PM), Angelica sinensis (AS), Andrographis paniculatea (AP), Tinospora cordifolia (TC), Uncaria tomentosa (UT), Pfaffia paniculate (PP), Sutherlandia frutescens (SF), and Rhaponticum carthamoides (RC)). Considering biological activity, their antioxidant (DPPH, ABTS, FRAP, and ferrous-ion-chelating ability assays), anti-acetylcholinesterase, anti-hyaluronidase, and anti-tyrosinase activities were evaluated. The richest in polyphenols, flavonoids, and phenolic acids was UR (327.78 mg GAE/g, 230.13 mg QE/g, and 81.03 mg CA/g, respectively). The highest inhibitions of acetylcholinesterase, hyaluronidase, and tyrosinase were observed for TC, UR, and PM, respectively. In the case of antioxidant properties, extract from PM appeared to most strongly reduce DPPH, extract from UR inhibited ABTS, and extract from SF showed the best chelating properties. It should be noted that a particularly interesting plant was Ulcaria rhynchophylla . The results mean that there were compounds in UR with broad biological activities, and this species should be explored in more detail. Additionally, our results justify the traditional use of these species in the nutripharmacological or ethnopharmacological care systems of different regions.
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- 2023
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15. First record of the human infection of Brucella melitensis in Kyrgyzstan: evidence from whole-genome sequencing-based analysis.
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Kydyshov K, Usenbaev N, Berdiev S, Dzhaparova A, Abidova A, Kebekbaeva N, Abdyraev M, Wareth G, Brangsch H, Melzer F, Neubauer H, and Pletz MW
- Subjects
- Humans, Kyrgyzstan epidemiology, Asia, Computational Biology, Iran, Brucella melitensis genetics
- Abstract
Background: Brucellosis, a zoonosis mainly transmitted by consumption of unpasteurized dairy products as well as direct contact with infected animals, is endemic in Kyrgyzstan. However, Brucella species in humans have not been investigated and the origin of the disease remains poorly known in wide parts of Сentral Asia. Thus, molecular characterization of the circulating strains is a critical first step in understanding Brucella diversity in the country., Methods: In this study, isolates were collected from patients with suspected brucellosis from different regions in Kyrgyzstan between 2019 and 2020. The detection and identification of Brucella was carried out by Bruce-ladder PCR. Next generation sequencing was used to sequence the 89 Brucella isolates, which were genotyped by cgSNP and cgMLST to identify epidemiological connection between Brucella isolates as well as placing them in the context of the global Brucella phylogeny., Results: The Brucella strains isolated from all regions of Kyrgyzstan were identified as B. melitensis. Based on cgSNP analysis, 18 sequence types were differentiated. The highest numbers of different sequence types were found in Batken (n = 8), Osh (n = 8) and Jalal-Abad (n = 6) oblasts. According to cgSNP and cgMLST analyses, different B. melitensis lineages circulate in Kyrgyzstan, all of them belonging to the Eastern Mediterranean group of the global Brucella phylogeny with the highest similarity to strains from Turkmenistan, Iran and Turkey., Conclusion: In the present study, B. melitensis was identified as a causative agent of human brucellosis in Kyrgyzstan and different lineages could be identified. Since this study focused on isolates of human origin, the identity of Brucella species and lineages circulating among animal populations remains elusive. Implementing culture techniques and use of most recent molecular, bioinformatic and epidemiological tools are needed to set up a One Health approach to combat brucellosis in Kyrgyzstan. Further, other Сentral Asian countries need to take part in this effort as brucellosis is a transboundary disease in these regions., (© 2022. The Author(s).)
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- 2022
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16. Taxonomic diversity of the Hipposideros larvatus species complex (Chiroptera: Hipposideridae) in mainland Asia.
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Yuzefovich AP, Artyushin IV, Skopin AE, Son NT, and Kruskop SV
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- Animals, Phylogeny, Asia, Chiroptera
- Abstract
Hipposideros larvatus sensu lato constitutes a widespread species complex consisting of morphologically similar forms with a taxonomy that is in need of a revision. Here we present the results of a phylogenetic analysis of members of this species complex based on two mitochondrial (CytB and COI) and seven nuclear (ABHD11, ACOX2, COPS, RAG2, ROGDI2, SORBS2 and THY) genes, and a morphometric analysis. Morphological data, although showing certain diversity, does not allow an accurate delimitation of the taxonomic boundaries and occasionally contradict to genetic grouping. The molecular analyses based on mitochondrial data support the paraphyly of the H. larvatus species complex, with H. armiger recovered nested within. The nuclear data recovered all the lineages of H. larvatus sensu lato forming a monophyletic clade. Within it, apparently four different species-level clades could be revealed in Southeast Asia. One is distributed in northern Myanmar, southern China (including Hainan) and northern Vietnam, and also reaches into central Vietnam along the coast (Cham Islands). The valid name for this taxon must be H. poutensis Allen. The second clade is comprised by populations inhabiting the Malay Peninsula and the Sunda Islands, we identify this taxon as H. larvatus sensu stricto. The third taxon was identified only from southern Myanmar. The fourth taxon is distributed in southern and central Indochina. Its representatives were not related to any of the forms identified in Myanmar, and therefore, its previous identification with H. grandis sounds questionable. Since both the third and fourth taxa cannot now be unambiguously associated with a particular named form, we conventionally designate them as H. cf. grandis 1 and 2.
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- 2022
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17. Disentangling phylogenetic relations and biogeographic history within the Cucujus haematodes species group (Coleoptera: Cucujidae).
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Kadej M, Zając K, Gutowski JM, Jaworski T, Plewa R, Ruta R, Sikora K, Smolis A, Magoga G, Montagna M, Eckelt A, Birkemoe T, Bonacci T, Brandmayr P, Heibl C, Cizek L, Algis Davenis S, Fuchs L, Horák J, Kapla A, Kulijer D, Merkl O, Müller J, Noordijk J, Saluk S, Sverdrup-Thygeson A, Vrezec A, and Kajtoch Ł
- Subjects
- Animals, Asia, North America, Phylogeny, Refugium, Coleoptera genetics
- Abstract
Recent progress in the taxonomy of flat bark beetles (Cucujidae), specifically, in the genus Cucujus, has revealed great diversity in subtropical Asia, but the seemingly well-known temperate and boreal taxa need further attention because of their conservation status. Here, we used an integrative approach using morphology, DNA, and species distribution modelling to disentangle phylogenetic relations, verify the number of species, and understand the historical biogeography of Palearctic and Nearctic Cucujus beetles, particularly the C. haematodes species group. Species distinctiveness was supported for C. cinnaberinus, but present-day C. haematodes turned out to be a species complex made up of separate lineages in the western, middle and eastern parts of its Palearctic range. Cucujus muelleri was a member of that complex, being sister to Asian C. haematodes. Moreover, C. haematodes caucasicus was found to be phylogenetically closely related to Italian C. tulliae, and both to be sister to European C. haematodes. North American C. clavipes clavipes and C. c. puniceus resulted to be enough divergent to be considered different species. Interestingly, western American C. puniceus turned out to be closely related to the C. haematodes complex, whereas eastern American C. clavipes constituted a separate lineage, being distantly related to both C. puniceus and C. cinnaberinus. These patterns suggest former trans-continental connections among the ancestors of extant flat bark beetle species. Moreover, a divergent lineage of C. cinnaberinus was found in Calabria, which should be regarded at the very least as a subspecies. The ancestor of C. hameatodes group originated in mid-Miocene, and next, ca. 6.2 Mya, a line leading to C. cinnaberinus had split. Speciation of the American lineages occurred during Pliocene (4.4 Mya for C. clavipes and 3.3 Mya for C. puniceus). Species classified as C. haematodes, C. tulliae and C. muelleri, as well as distinct lineages within C. cinnaberinus split during mid Pleistocene (ca. 1.5 Mya). A comparison of species climatic requirements and their present distribution allowed to identify glacial refugia in south-eastern areas of North America (C. clavipes), south-western areas of North America (C. puniceus), and the Mediterranean and Caspian Sea Basins (European Cucujus species), or south-eastern areas of Asia and the foothills of the central Asian mountains (eastern C. haematodes). Subsequent climatic changes in the Holocene forced these beetles to move their ranges northwards along the coasts of the Pacific (C. puniceus) or Atlantic (C. clavipes), north-eastwards to central, northern, and eastern Europe (C. cinnaberinus and European C. haematodes) or Siberia (Asian C. haematodes). The combined use of molecular, morphological and climatic data allows a comprehensive understanding of the phylogenetic relations and past distributions of Cucujus beetles, highlighting the complexity of C. haematodes species group evolution., (Copyright © 2022 Elsevier Inc. All rights reserved.)
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- 2022
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18. Oriental freshwater mussels arose in East Gondwana and arrived to Asia on the Indian Plate and Burma Terrane.
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Bolotov IN, Pasupuleti R, Subba Rao NV, Unnikrishnan SK, Chan N, Lunn Z, Win T, Gofarov MY, Kondakov AV, Konopleva ES, Lyubas AA, Tomilova AA, Vikhrev IV, Pfenninger M, Düwel SS, Feldmeyer B, Nesemann HF, and Nagel KO
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- Animals, Asia, India, Bivalvia anatomy & histology, Bivalvia classification, Bivalvia physiology, Phylogeny, Fossils, Biological Evolution, Unionidae physiology, Unionidae anatomy & histology, Fresh Water
- Abstract
Freshwater mussels cannot spread through oceanic barriers and represent a suitable model to test the continental drift patterns. Here, we reconstruct the diversification of Oriental freshwater mussels (Unionidae) and revise their taxonomy. We show that the Indian Subcontinent harbors a rather taxonomically poor fauna, containing 25 freshwater mussel species from one subfamily (Parreysiinae). This subfamily most likely originated in East Gondwana in the Jurassic and its representatives arrived to Asia on two Gondwanan fragments (Indian Plate and Burma Terrane). We propose that the Burma Terrane was connected with the Indian Plate through the Greater India up to the terminal Cretaceous. Later on, during the entire Paleogene epoch, these blocks have served as isolated evolutionary hotspots for freshwater mussels. The Burma Terrane collided with mainland Asia in the Late Eocene, leading to the origin of the Mekong's Indochinellini radiation. Our findings indicate that the Burma Terrane had played a major role as a Gondwanan "biotic ferry" alongside with the Indian Plate., (© 2022. The Author(s).)
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- 2022
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19. Phylogenetic reconstruction of the initial stages of the spread of the SARS-CoV-2 virus in the Eurasian and American continents by analyzing genomic data.
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Bukin YS, Bondaryuk AN, Kulakova NV, Balakhonov SV, Dzhioev YP, and Zlobin VI
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- Animals, Asia epidemiology, COVID-19 history, COVID-19 transmission, COVID-19 virology, Chiroptera virology, Europe epidemiology, Genomics methods, History, 20th Century, History, 21st Century, Humans, Middle East epidemiology, North America epidemiology, Phylogeny, Polymorphism, Genetic, SARS-CoV-2 classification, SARS-CoV-2 pathogenicity, South America epidemiology, COVID-19 epidemiology, Evolution, Molecular, Genome, Viral, Mutation Rate, SARS-CoV-2 genetics
- Abstract
Samples from complete genomes of SARS-CoV-2 isolated during the first wave (December 2019-July 2020) of the global COVID-19 pandemic from 21 countries (Asia, Europe, Middle East and America) around the world, were analyzed using the phylogenetic method with molecular clock dating. Results showed that the first cases of COVID-19 in the human population appeared in the period between July and November 2019 in China. The spread of the virus into other countries of the world began in the autumn of 2019. In mid-February 2020, the virus appeared in all the countries we analyzed. During this time, the global population of SARS-CoV-2 was characterized by low levels of the genetic polymorphism, making it difficult to accurately assess the pathways of infection. The rate of evolution of the coding region of the SARS-CoV-2 genome equal to 7.3 × 10
-4 (5.95 × 10-4 -8.68 × 10-4 ) nucleotide substitutions per site per year is comparable to those of other human RNA viruses (Measles morbillivirus, Rubella virus, Enterovirus C). SARS-CoV-2 was separated from its known close relative, the bat coronavirus RaTG13 of the genus Betacoronavirus, approximately 15-43 years ago (the end of the 20th century)., (Copyright © 2021 Elsevier B.V. All rights reserved.)- Published
- 2021
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20. Taxonomic notes on two endemic geometrine genera from Middle Asia (Lepidoptera: Geometridae, Geometrinae).
- Author
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Viidalepp J and Kostjuk I
- Subjects
- Animals, Asia, Female, Male, Lepidoptera, Moths
- Abstract
The genus Hissarica Viidalepp (Geometridae, Geometrinae) is restored from synonymy with Xenochlorodes Warren. The moths and their male and female genitalia are illustrated and characterized in comparison with those of Hierochthonia Prout and Xenochlorodes. Taxonomic positions of Hierochthonia alexandraria Prout and Eucrostes petitaria Christoph are discussed and the new genus Ratsa Viidalepp Kostjuk gen. nov. is established for them, creating the new combinations Ratsa alexandraria Prout and Ratsa petitaria Christoph.
- Published
- 2021
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21. The impact of demographic disparities in the presentation of sarcoidosis: A multicenter prospective study.
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Zhou Y, Gerke AK, Lower EE, Vizel A, Talwar D, Strambu I, Francesqui J, Sellares J, Sawahata M, Obi ON, Nagai S, Tanizawa K, Judson MA, Jeny F, Valeyre D, Cunha Castro MD, Pereira C, Balter M, and Baughman RP
- Subjects
- Adult, Age Factors, Americas epidemiology, Asia epidemiology, Cardiomyopathies, Europe epidemiology, Eye Diseases epidemiology, Female, Humans, Lung Diseases epidemiology, Male, Middle Aged, Multicenter Studies as Topic, Prospective Studies, Racial Groups, Sex Factors, Skin Diseases epidemiology, Time Factors, Demography, Sarcoidosis epidemiology
- Abstract
Objective: To study how demographic differences impact disease manifestation of sarcoidosis using the WASOG tool in a large multicentric study., Methods: Clinical data regarding 1445 patients with sarcoidosis from 14 clinical sites in 10 countries were prospectively reviewed from Feb 1, 2020 to Sep 30, 2020. Organ involvement was evaluated for the whole group and for subgroups differentiated by sex, race, and age., Results: The median age of the patients at diagnosis was 46 years old; 60.8% of the patients were female. The most commonly involved organ was lung (96%), followed by skin (24%) and eye (22%). Black patients had more multiple organ involvement than White patients (OR = 3.227, 95% CI: 2.243-4.643) and females had more multiple organ involvement than males (OR = 1.238, 95% CI: 1.083-1.415). Black patients had more frequent involvement of neurologic, skin, eye, extra thoracic lymph node, liver and spleen than White and Asian patients. Women were more likely to have eye (OR = 1.522, 95%CI: 1.259-1.838) or skin involvement (OR = 1.369, 95%CI: 1.152-1.628). Men were more likely to have cardiac involvement (OR = 1.326, 95%CI: 1.096-1.605). A total of 262 (18.1%) patients did not receive systemic treatment for sarcoidosis. Therapy was more common in Black patients than in other races., Conclusion: The initial presentation and treatment of sarcoidosis was related to sex, race, and age. Black and female individuals are found to have multiple organ involvement more frequently. Age at diagnosis<45, Black patients and multiple organ involvement were independent predictors of treatment., (Copyright © 2021. Published by Elsevier Ltd.)
- Published
- 2021
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22. Mitogenome Phylogeny Including Data from Additional Subspecies Provides New Insights into the Historical Biogeography of the Eurasian lynx Lynx lynx .
- Author
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Mengüllüoğlu D, Ambarlı H, Barlow A, Paijmans JLA, Sayar AO, Emir H, Kandemir İ, Hofer H, Fickel J, and Förster DW
- Subjects
- Animals, Asia, DNA, Mitochondrial genetics, Europe, Evolution, Molecular, Genome, Mitochondrial, Lynx genetics, Phylogeography
- Abstract
Previous molecular studies of the wide-ranging Eurasian lynx Lynx lynx focused mainly on its northern Palearctic populations, with the consequence that the reconstruction of this species' evolutionary history did not include genetic variation present in its southern Palearctic distribution. We sampled a previously not considered Asian subspecies ( L. l. dinniki ), added published data from another Asian subspecies ( L. l. isabellinus ), and reassessed the Eurasian lynx mtDNA phylogeny along with previously published data from northern Palearctic populations. Our mitogenome-based analyses revealed the existence of three major clades (A: Central Asia, B: SE Europe/SW Asia, C: Europe and Northern Asia) and at least five lineages, with diversification in Lynx lynx commencing at least 28kyr earlier than hitherto estimated. The subspecies L. l. isabellinus harbors the most basal matriline, consistent with the origin of Lynx lynx in this subspecies' current range. L. l. dinniki harbors the second most basal matriline, which is related to, and may be the source of, the mtDNA diversity of the critically endangered Balkan lynx L. l. balcanicus . Our results suggest that the Anatolian peninsula was a glacial refugium for Eurasian lynx, with previously unconsidered implications for the colonization of Europe by this species.
- Published
- 2021
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23. Unravelling the genetic diversity and relatedness of Echinococcus multilocularis isolates in Eurasia using the EmsB microsatellite nuclear marker.
- Author
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Umhang G, Bastid V, Avcioglu H, Bagrade G, Bujanić M, Bjelić Čabrilo O, Casulli A, Dorny P, van der Giessen J, Guven E, Harna J, Karamon J, Kharchenko V, Knapp J, Kolarova L, Konyaev S, Laurimaa L, Losch S, Miljević M, Miterpakova M, Moks E, Romig T, Saarma U, Snabel V, Sreter T, Valdmann H, and Boué F
- Subjects
- Animals, Asia, Echinococcosis parasitology, Estonia, Foxes parasitology, Genotype, Mitochondria genetics, Rodentia parasitology, Zoonoses parasitology, Echinococcus multilocularis genetics, Echinococcus multilocularis isolation & purification, Genetic Variation genetics, Microsatellite Repeats genetics
- Abstract
The cestode Echinococcus multilocularis is the causative agent of alveolar echinococcosis, a severe helminthic zoonotic disease distributed in the Northern Hemisphere. The lifecycle of the parasite is mainly sylvatic, involving canid and rodent hosts. The absence of genetic data from most eastern European countries is a major knowledge gap, affecting the study of associations with parasite populations in Western Europe. In this study, EmsB microsatellite genotyping of E. multilocularis was performed to describe the genetic diversity and relatedness of 785 E. multilocularis isolates from four western and nine eastern European countries, as well as from Armenia and the Asian parts of Russia and Turkey. The presence of the same E. multilocularis populations in the Benelux resulting from expansion from the historical Alpine focus can be deduced from the main profiles shared between these countries. All 33 EmsB profiles obtained from 528 samples from the nine eastern European countries belonged to the European clade, except one Asian profile form Ryazan Oblast, Russia. The expansion of E. multilocularis seems to have progressed from the historical Alpine focus through Hungary, Slovakia, the Czech Republic and southern Poland towards Latvia and Estonia. Most of the samples from Asia belong to the Asian clade, with one EmsB profile shared between Armenia and Turkey, and two between Turkey and Russia. However, two European profiles were described from two foxes in Turkey, including one harboring worms from both European and Asian clades. Three EmsB profiles from three Russian samples were associated with the Arctic clade. Two E. multilocularis profiles from rodents from Lake Baikal belonged to the Mongolian clade, described for the first time here using EmsB. Further worldwide studies on the genetic diversity of E. multilocularis using both mitochondrial sequencing and EmsB genotyping are needed to understand the distribution and expansion of the various clades., (Copyright © 2021 Elsevier B.V. All rights reserved.)
- Published
- 2021
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24. Incidence and Characteristics of Retinoblastoma in Poland: The First Nationwide Study 2010-2017.
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Nowak MS, Romanowska-Dixon B, Grabska-Liberek I, and Żurek M
- Subjects
- Asia, Child, Europe, Humans, Incidence, Infant, North America, Poland epidemiology, Retrospective Studies, Retinal Neoplasms epidemiology, Retinoblastoma epidemiology
- Abstract
Background : The present study aimed to investigate the incidence and characteristics of retinoblastoma in the overall population of Poland. Methods : The retrospective survey of both National Health Fund (NHF) and National Cancer Registry (NCR) databases were performed to identify all retinoblastoma cases in Poland in the years 2010-2017. Results : During 2010-2017, the mean age-standardised incidence of retinoblastoma (the unit of incidence is per 1,000,000 person-years) was 10.15 (95% CI 7.23-13.08) among children aged 0 to 4 years and 5.39 (95% CI 4.18-6.60) in those aged 0 to 9 years. During 2010-2014 (to allow 5 years of follow-up), the mean incidence of retinoblastoma by birth cohort analysis in Poland was 4.89 (95% CI 4.04-5.74) per 100,000 live births, corresponding to an incidence of 1 per 20,561 (95% CI 15,855-25,267) live births. In Poland, 14.6% of children with retinoblastoma had enucleation of the eye globe, 76.8% received different types of chemotherapy combined with focal treatment, 5.9% were treated with external beam radiotherapy, and 2.7% were treated with focal treatments only. Conclusions : The incidence of retinoblastoma and the pattern of medical management of retinoblastoma in Poland was similar to that reported in developed countries in Western Europe, Asia, and North America.
- Published
- 2021
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25. Phytochemical and Ethnopharmacological Perspectives of Ehretia laevis .
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Sharma P, Shri R, Ntie-Kang F, and Kumar S
- Subjects
- Animals, Anti-Inflammatory Agents chemistry, Anti-Inflammatory Agents pharmacology, Asia, Ethnopharmacology methods, Humans, Medicine, Traditional methods, Reproducibility of Results, Boraginaceae chemistry, Phytochemicals chemistry, Phytochemicals pharmacology, Plant Extracts chemistry, Plant Extracts pharmacology
- Abstract
Ehretia laevis Roxb. (Boraginaceae) has been extensively used as a traditional remedy for the treatment of a diverse range of ailments related to the respiratory system, the gastrointestinal tract, the reproductive system, and against several infections. This review critically assesses and documents, for the first time, the fragmented information on E. laevis , including its botanical description, folklore uses, bioactive phyto metabolites and pharmacological activities. The goal is to explore this plant therapeutically. Ethnomedicinal surveys reveal that E. laevis has been used by tribal communities in Asian countries for the treatment of various disorders. Quantitative and qualitative phytochemical investigations of E. laevis showed the presence of important phytoconstituents such as pentacyclic triterpenoids, phenolic acids, flavonoids, fatty acids, steroids, alkaloids, aliphatic alcohols, hydrocarbons, amino acids, carbohydrates, vitamins and minerals. Fresh plant parts, crude extracts, fractions and isolated compounds have been reported to exhibit broad spectrum of therapeutic activities viz., antioxidant, antiarthritic, antidiabetic, anti-inflammatory, antiulcer, antidiarrheal, antidysenteric, wound healing and anti-infective activities. E. laevis is shown to be an excellent potential source of drugs for the mitigation of jaundice, asthma, dysentery, ulcers, diarrhea, ringworm, eczema, diabetes, fissure, syphilis, cuts and wounds, inflammation, liver problems, venereal and infectious disorders. Although few investigations authenticated its traditional uses but employed uncharacterized crude extracts of the plant, the major concerns raised are reproducibility of therapeutic efficacy and safety of plant material. The outcomes of limited pharmacological screening and reported bioactive compounds of E. laevis suggest that there is an urgent need for in-depth pharmacological investigations of the plant.
- Published
- 2021
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26. Molecular characterization of Glaesserella parasuis strains isolated from North America, Europe and Asia by serotyping PCR and LS-PCR.
- Author
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Macedo N, Gottschalk M, Strutzberg-Minder K, Van CN, Zhang L, Zou G, Zhou R, Marostica T, Clavijo MJ, Tucker A, and Aragon V
- Subjects
- Animals, Asia epidemiology, Europe epidemiology, Haemophilus Infections epidemiology, Haemophilus Infections microbiology, North America epidemiology, Polymerase Chain Reaction veterinary, Prevalence, Seroepidemiologic Studies, Serotyping veterinary, Sus scrofa, Swine, Swine Diseases microbiology, Haemophilus Infections veterinary, Haemophilus parasuis genetics, Swine Diseases epidemiology
- Abstract
Glaesserella parasuis strains were characterized by serotyping PCR, vtaA virulence marker Leader Sequence (LS)-PCR, clinical significance, and geographic region. Overall, the serovars 4, 5/12, 7, 1, and 13 were the most commonly detected. Serovars of greatest clinical relevance were systemic isolates that had a higher probability of being serovar 5/12, 13, or 7. In comparison, pulmonary isolates had a higher likelihood of being serovars 2, 4, 7, or 14. Serovars 5/12 and 13 have previously been considered disease-associated, but this study agrees with other recent studies showing that serovar 7 is indeed associated with systemic G. parasuis disease. Serovar 4 strains illustrated how isolates can have varying degrees of virulence and be obtained from pulmonary, systemic, or nasal sites. Serovars 8, 9, 15, and 10 were predominantly obtained from nasal samples, which indicates a limited clinical significance of these serovars. Additionally, most internal G. parasuis isolates were classified as virulent by LS-PCR and were disease-associated isolates, including serovars 1, 2, 4, 5/12, 7, 13, and 14. Isolates from the nasal cavity, including serovars 6, 9, 10, 11, and 15, were classified as non-virulent by LS-PCR. In conclusion, the distribution of G. parasuis serovars remains constant, with few serovars representing most of the strains isolated from affected pigs. Moreover, it was confirmed that the LS-PCR can be used for G. parasuis virulence prediction of field strains worldwide.
- Published
- 2021
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27. African and Asian leopards are highly differentiated at the genomic level.
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Paijmans JLA, Barlow A, Becker MS, Cahill JA, Fickel J, Förster DWG, Gries K, Hartmann S, Havmøller RW, Henneberger K, Kern C, Kitchener AC, Lorenzen ED, Mayer F, OBrien SJ, von Seth J, Sinding MS, Spong G, Uphyrkina O, Wachter B, Westbury MV, Dalén L, Bhak J, Manica A, and Hofreiter M
- Subjects
- Animals, Asia, Cats, Ecosystem, Genomics, Phylogeography, Panthera
- Abstract
Leopards are the only big cats still widely distributed across the continents of Africa and Asia. They occur in a wide range of habitats and are often found in close proximity to humans. But despite their ubiquity, leopard phylogeography and population history have not yet been studied with genomic tools. Here, we present population-genomic data from 26 modern and historical samples encompassing the vast geographical distribution of this species. We find that Asian leopards are broadly monophyletic with respect to African leopards across almost their entire nuclear genomes. This profound genetic pattern persists despite the animals' high potential mobility, and despite evidence of transfer of African alleles into Middle Eastern and Central Asian leopard populations within the last 100,000 years. Our results further suggest that Asian leopards originated from a single out-of-Africa dispersal event 500-600 thousand years ago and are characterized by higher population structuring, stronger isolation by distance, and lower heterozygosity than African leopards. Taxonomic categories do not take into account the variability in depth of divergence among subspecies. The deep divergence between the African subspecies and Asian populations contrasts with the much shallower divergence among putative Asian subspecies. Reconciling genomic variation and taxonomy is likely to be a growing challenge in the genomics era., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2021 Elsevier Inc. All rights reserved.)
- Published
- 2021
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28. Further analysis of 1532 deciduous woody species from North America, Europe, and Asia supports continental-scale differences in red autumn colouration: A response to Peña-Novas & Archetti (2020) 'Biogeography and evidence for adaptive explanations of autumn colors'.
- Author
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Renner SS and Zohner CM
- Subjects
- Asia, Color, Europe, North America, Temperature, Plant Leaves
- Published
- 2020
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29. SARS-CoV-2 infections and COVID-19 mortalities strongly correlate with ACE1 I/D genotype.
- Author
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Yamamoto N, Ariumi Y, Nishida N, Yamamoto R, Bauer G, Gojobori T, Shimotohno K, and Mizokami M
- Subjects
- Angiotensin-Converting Enzyme 2, Asia epidemiology, Asia ethnology, Betacoronavirus metabolism, COVID-19, Coronavirus Infections epidemiology, Europe epidemiology, Europe ethnology, Gene Frequency genetics, Genotype, Humans, Pandemics, Pneumonia, Viral epidemiology, Polymorphism, Single Nucleotide genetics, Risk, Risk Factors, SARS-CoV-2, Severity of Illness Index, Treatment Outcome, Coronavirus Infections mortality, Peptidyl-Dipeptidase A genetics, Pneumonia, Viral mortality
- Abstract
Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) causes coronavirus disease 2019 (COVID-19). The relentless spread and pathogenicity of the virus have become a global public health emergency. One of the striking features of this pandemic is the pronounced impact on specific regions and ethnic groups. In particular, compared with East Asia, where the virus first emerged, SARS-CoV-2 has caused high rates of morbidity and mortality in Europe. This has not been experienced in past global viral infections, such as influenza, severe acute respiratory syndrome (SARS) and Middle East respiratory syndrome (MERS) and is unique to SARS-CoV-2. For this reason, we investigated the involvement of genetic factors associated with SARS-CoV-2 infection with a focus on angiotensin-converting enzyme (ACE)-related genes, because ACE2 is a receptor for SARS-CoV-2. We found that the ACE1 II genotype frequency in a population was significantly negatively correlated with the number of SARS-CoV-2 cases. Similarly, the ACE1 II genotype was negatively correlated with the number of deaths due to SARS-CoV-2 infection. These data suggest that the ACE1 II genotype may influence the prevalence and clinical outcome of COVID-19 and serve as a predictive marker for COVID-19 risk and severity., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020 Elsevier B.V. All rights reserved.)
- Published
- 2020
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30. GalliForm, a database of Galliformes occurrence records from the Indo-Malay and Palaearctic, 1800-2008.
- Author
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Boakes EH, Fuller RA, Mace GM, Ding C, Ang TT, Auffret AG, Clark NE, Dunn J, Gilbert J, Golovnyuk V, Gupta G, Irlich U, Joachim E, O' Connor K, Potapov E, Potapov R, Schleicher J, Stebbing S, Townshend T, and McGowan PJK
- Subjects
- Animals, Asia, Biodiversity, Europe, Geographic Mapping, Animal Distribution, Databases, Factual, Galliformes
- Abstract
Historical as well as current species distribution data are needed to track changes in biodiversity. Species distribution data are found in a variety of sources, each of which has its own distinct bias toward certain taxa, time periods or places. We present GalliForm, a database that comprises 186687 galliform occurrence records linked to 118907 localities in Europe and Asia. Records were derived from museums, peer-reviewed and grey literature, unpublished field notes, diaries and correspondence, banding records, atlas records and online birding trip reports. We describe data collection processes, georeferencing methods and quality-control procedures. This database has underpinned several peer-reviewed studies, investigating spatial and temporal bias in biodiversity data, species' geographic range changes and local extirpation patterns. In our rapidly changing world, an understanding of long-term change in species' distributions is key to predicting future impacts of threatening processes such as land use change, over-exploitation of species and climate change. This database, its historical aspect in particular, provides a valuable source of information for further studies in macroecology and biodiversity conservation.
- Published
- 2020
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31. The international discussion and the new regulations concerning transvaginal mesh implants in pelvic organ prolapse surgery.
- Author
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Ng-Stollmann N, Fünfgeld C, Gabriel B, and Niesel A
- Subjects
- Asia, Australia, Canada, Europe, France, Humans, Pelvic Organ Prolapse surgery, Surgical Mesh
- Abstract
The use of transvaginal mesh implants for POP and urinary incontinence is currently being extensively debated among experts as well as the general public. Regulations surrounding the use of these implants differ depending on the country. Although in the USA, the UK, in Canada, Australia, New Zealand, and France, transvaginal mesh implants have been removed from the market, in most mainland European countries, Asia, and South America, they are still available as a surgical option for POP correction. The aim of this review is to provide an overview of the historical timeline and the current situation worldwide, as well as to critically discuss the implications of the latest developments in urogynecological patient care and the training of doctors.
- Published
- 2020
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32. Effects of International Labour Migration on the Mental Health and Well-Being of Left-Behind Children: A Systematic Literature Review.
- Author
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Antia K, Boucsein J, Deckert A, Dambach P, Račaitė J, Šurkienė G, Jaenisch T, Horstick O, and Winkler V
- Subjects
- Asia, Child, Cross-Sectional Studies, Female, Humans, Male, Parent-Child Relations, Emigration and Immigration, Mental Health, Transients and Migrants
- Abstract
Labour migration is a challenge for the globalised world due to its long-term effects such as the formation of transnational families. These families, where family members of migrant workers are "left-behind", are becoming a common phenomenon in many low- and middle-income countries. Our systematic literature review investigated the effects of international parental labour migration on the mental health and well-being of left-behind children. Following the PRISMA guidelines, we performed searches in PubMed, PsychINFO, Web of Science, Cochrane Library and Google Scholar, resulting in 30 finally included studies. We found that mental health and well-being outcomes of left-behind children differed across and sometimes even within regions. However, only studies conducted in the Americas and South Asia observed purely negative effects. Overall, left-behind children show abnormal Strengths and Difficulties Questionnaire scores and report higher levels of depression and loneliness than children who do not live in transnational families. Evidence from the studies suggests that gender of the migrant parent, culture and other transnational family characteristics contribute to the well-being and mental health of left-behind children. Further research utilising longitudinal data is needed to better understand the complex and lasting effects on left-behind children.
- Published
- 2020
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33. Origin and domestication of Cucurbitaceae crops: insights from phylogenies, genomics and archaeology.
- Author
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Chomicki G, Schaefer H, and Renner SS
- Subjects
- Africa, Archaeology, Asia, Domestication, Genomics, Phylogeny, Cucurbitaceae genetics
- Abstract
Some of the World's most valuable crops, including watermelon, honey melon, cucumber, squash, zucchini and pumpkin, belong to the family Cucurbitaceae. We review insights on their domestication from new phylogenies, archaeology and genomic studies. Ancestral state estimation on the most complete Cucurbitaceae phylogeny to date suggests that an annual life cycle may have contributed to domestication. Domestication started c. 11 000 years ago in the New World and Asia, and apparently more recently in Africa. Some cucurbit crops were domesticated only once, others multiple times (e.g. melon from different Asian and African populations). Most wild cucurbit fruits are bitter and nonpalatable to humans, and nonbitterness of the pulp apparently was a trait favoured early during domestication, with genomic data showing how bitterness loss was achieved convergently. The genetic pathways underlying lycopene accumulation, red or orange pulp colour, and fruit size and shape are only just beginning to be understood. The study of cucurbit domestication in recent years has benefitted from the increasing integration of archaeological and genomic data with insights from herbarium collections, the most efficient way to understand species' natural geographic ranges and climate adaptations., (© 2019 The Authors. New Phytologist © 2019 New Phytologist Trust.)
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- 2020
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34. The genus Semicerura (Collembola; Isotomidae) in Asia.
- Author
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Potapov M, Xie Z, Kuprin A, and Sun X
- Subjects
- Animal Distribution, Animals, Asia, Arthropods
- Abstract
Two new species, Semicerura bryophila sp. nov. and S. draconis sp. nov., are described from the Far East of Russia and north-eastern part of China. S. goryshini Martynova, 1969 is redescribed based on the type material and fresh materials from China and South Korea. The holotype of S. bishopi Maynard, 1951 (eastern areas of the U.S.A.) was studied and commented on. Taxonomic remarks to s-chaetotaxy and the labium of the genus are given.
- Published
- 2020
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35. Araucarioid wood from the late Oligocene-early Miocene of Hainan Island: first fossil evidence for the genus Agathis in the Northern Hemisphere.
- Author
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Oskolski AA, Huang L, Stepanova AV, and Jin J
- Subjects
- Asia, Australia, China, Asia, Eastern, Islands, Phylogeny, Araucariaceae, Fossils, Wood
- Abstract
Although many fossil and molecular data suggest migrations from Malesia and Asia to Australia appear to dominate floristic exchange between Australian and Asian rainforests, evidence is emerging that demonstrate dispersal of plant groups from Australia to Asia. In this paper, a new species Agathis ledongensis sp. nov. is described on the basis of silicified wood from the late Oligocene-early Miocene of the Qiutangling Formation in Ledong, Hainan Island, South China. It is the first fossil record of Agathis in the Northern Hemisphere, and the only known fossil evidence of its dispersal outside of Gondwana. The close affinity of the fossil wood from Ledong with the genus Agathis was confirmed by comparing quantitative traits in 31 wood samples of 20 species representing all three extant genera of the Araucariaceae. The percentage of tracheids with uniseriate pitting on radial walls is shown as an additional diagnostic trait for separating Agathis and Wollemia from Araucaria. The wood of Agathis ledongensis provides evidence for the dispersal of this important plant group from Australia, or another Gondwanan terrane, to eastern Asia based on reliable fossil data. It records the occurrence of this genus in Hainan Island by the early Miocene, i.e. at the beginning of the formation of the island chains between Australia and the South-East Asia and thus the provision of a land migration route. As the land routes between these continents were restricted at that time, the migration of Agathis to Malesia and Asia was presumably facilitated by long-distance dispersal of its winged seeds by wind.
- Published
- 2020
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36. Review of the subtribe Gyrophaenina Kraatz 1856 (Coleoptera: Staphylinidae: Aleocharinae: Homalotini) of Middle Asia, with emphasis on the fauna of Kazakhstan.
- Author
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Enushchenko IV
- Subjects
- Animal Distribution, Animals, Asia, China, Kazakhstan, Kyrgyzstan, Tajikistan, Coleoptera
- Abstract
A taxonomic and biogeographic review of thirteen species of Encephalus Stephens 1832 and Gyrophaena Mannerheim 1830 (Aleocharinae: Gyrophaenina) of Middle Asia, with an emphasis on the fauna of Kazakhstan is provided. Gyrophaena (s.str.) aryanamensis Enushchenko, sp. nov. from Tajikistan and Kyrgyzstan, and G. (s.str.) hochhuthi Bernhauer 1908 are re-(described) and illustrated. Several synonymies are established: Encephalus (s.str.) angusticollis Sahlberg 1880 = E. solskyi Heyden 1880 (replacement name of E. kraatzi Solsky 1875; not synonym of G. nitidula (Gyllenhal 1810)), resyn., = E. torosus Eppelsheim 1893, syn. nov.; G. (s.str.) affinis Mannerheim 1830 = G. glareicola Pace 2010, syn. nov., = G. kangasi Rutanen 1994, syn. nov., = G. ranongensis Pace 2005, syn. nov., = G. rosskotheni Wüsthoff 1937, syn. nov. Illustrations of habitus and sexual characters of E. angusticollis are provided. A key to the species of Gyrophaena of the laetula group of Kazakhstan is given. Several members of Gyrophaenina are recorded for the first time: E. angusticollis, G. (s.str.) bihamata Thomson 1867, G. (s.str.) congrua Erichson 1837, G. (s.str.) joyi Wendeler 1924, G. (s.str.) obsoleta Ganglbauer 1895, G. (Phaenogyra) strictula Erichson 1839 from Kazakhstan and Middle Asia, and G. (s.str.) hochhuthi from Kazakhstan, Kyrgyzstan, and China.
- Published
- 2019
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37. Lemyra kaikarisi, a new species from China (Lepidoptera, Erebidae, Arctiinae).
- Author
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Saldaitis A, Volynkin AV, and Duda J
- Subjects
- Animals, Asia, China, Moths
- Abstract
The genus Lemyra Walker, 1856 is widely distributed in Asia. It is subdivided into two subgenera, Lemyra and Thyrgorina Walker, 1864 [1865] and includes more than 100 valid species, many of which were described during last three decades (Thomas 1990; Fang 1993; Inoue 1993; Tshistjakov Kishida 1994; Kirti Gill 2008; Černý 2011; 2014; Černy Pinratana 2009; Dubatolov 2007; Kirti Singh 2016; Saldaitis et al. 2018).
- Published
- 2019
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38. Lead (Pb) in the tissues of Anatidae, Ardeidae, Sternidae and Laridae of the Northern Hemisphere: a review of environmental studies.
- Author
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Korbecki J, Gutowska I, Chlubek D, and Baranowska-Bosiacka I
- Subjects
- Animals, Asia, Bone and Bones chemistry, Charadriiformes, Ducks, Environmental Monitoring, Europe, Feathers chemistry, Geese, North America, Birds, Lead analysis, Water Pollutants, Chemical analysis, Water Pollution, Chemical analysis
- Abstract
Due to the ability of birds to travel long distances in the air, the potential feeding area of each individual is much larger than that of typical terrestrial animals. This makes birds a convenient indicator of environmental lead (Pb) pollution over large areas, in particular areas of inland and coastal waters. The aim of this study was to assess the concentrations of Pb in various organs of water birds from a variety of locations. The focus was on ducks, geese and swans (Anatidae); herons and egrets (Ardeidae); terns (Sternidae); and gulls (Laridae). This article describes the level of lead in the most commonly studied tissue types: feathers, bones and the liver. The study also presents data concerning the concentration of lead in the eggs of water birds. The highest levels of lead pollution can be observed in China and Korea, related to their high level of industrialization. In Iran too, environmental lead pollution is high, likely due to the developed petrochemical industry. Lead pollution in Japan, as well as in Western European countries (Spain, France, Italy), seems to be much lower than in China, India or Iran. Nevertheless, the level of pollution in Europe is higher than satisfactory, despite the introduction of a number of bans related to, for example, the use of leaded petrol or lead-containing paints. Finally, the USA and Canada appear to be the areas with the lowest lead pollution, possibly due to their low population densities.
- Published
- 2019
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39. Leonurus cardiaca L. as a Source of Bioactive Compounds: An Update of the European Medicines Agency Assessment Report (2010).
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Fierascu RC, Fierascu I, Ortan A, Fierascu IC, Anuta V, Velescu BS, Pituru SM, and Dinu-Pirvu CE
- Subjects
- Amenorrhea drug therapy, Asia, Cardiotonic Agents chemistry, Dysmenorrhea drug therapy, Europe, Female, Humans, Menopause drug effects, Phytochemicals chemistry, Plant Extracts chemistry, Cardiotonic Agents therapeutic use, Leonurus chemistry, Phytochemicals therapeutic use, Plant Extracts therapeutic use
- Abstract
Leonurus cardiaca L. (motherwort) is a perennial herb, native to Asia and southeastern Europe, with widespread global occurrence in present days. The plant was historically used as cardiotonic and for treating gynaecological afflictions (such as amenorrhea, dysmenorrhea, menopausal anxiety, or postpartum depression). Although its use in oriental and occidental medicine is relatively well documented, the recent progress registered raises the need for an update of the Medicines Agency assessment report on Leonurus cardiaca L., herba (2010). The current study presents the progress made within the 2010-2018 timeframe regarding the potential applications and scientific evidences supporting the traditional use of motherwort, in the same time suggesting future research opportunities.
- Published
- 2019
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40. Species and site contributions to β-diversity in fleas parasitic on the Palearctic small mammals: ecology, geography and host species composition matter the most.
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Krasnov BR, Shenbrot GI, Warburton EM, van der Mescht L, Surkova EN, Medvedev SG, Pechnikova N, Ermolova N, Kotti BK, and Khokhlova IS
- Subjects
- Africa, Northern epidemiology, Animal Distribution, Animals, Asia epidemiology, Europe epidemiology, Flea Infestations epidemiology, Flea Infestations parasitology, Host-Parasite Interactions, Biodiversity, Eulipotyphla, Flea Infestations veterinary, Lagomorpha, Rodentia, Siphonaptera physiology
- Abstract
The β-diversity of fleas parasitic on small mammals in 45 regions of the Palearctic was partitioned into species [species contributions to β-diversity (SCBD)] and site ( = assemblage) contributions [local contributions to β-diversity (LCBD)]. We asked what are the factors affecting SCBD and LCBD and tested whether (a) variation in ecological, morphological, life history and geographic traits of fleas can predict SCBD and (b) variation in flea and host community metrics, off-host environmental factors, host species composition of flea assemblages can predict LCBD. We used spatial variables to describe geographic distribution of flea assemblages with various LCBD values. SCBD significantly increased with an increase in abundance and a decrease in phylogenetic host specificity of a flea as well as with size and latitude of its geographic range, but was not associated with any morphological/life history trait. LCBD of flea assemblages did not depend on either flea or host species richness or environmental predictors, but was significantly affected by compositional uniqueness ( = LCBD) of regional host assemblages and variables describing their species composition. In addition, variation in LCBD was also explained by broad-to-moderate-scale spatial variables. We conclude that SCBD of fleas could be predicted via their ecological and geographic traits, whereas LCBD of their assemblages could be predicted via host composition.
- Published
- 2019
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41. New species of Ischalia Pascoe, 1860 (Coleoptera: Ischaliidae), with a key to aposematically coloured species from continental Asia, and new notes on their mimicry.
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Kazantsev SV and Telnov D
- Subjects
- Animal Distribution, Animal Structures, Animals, Asia, Body Size, Laos, Male, Organ Size, Vietnam, Coleoptera
- Abstract
Three new species of false fire-coloured beetles, namely Ischalia (s. str.) ancora, I. (s. str.) holzschuhi, and I. (s. str.) laosensis spp. n., are described from Laos and Vietnam. Ischalia (s. str.) martensi Paulus, 1971 is redescribed from the type and additional material. Male genitalia are for the first time illustrated in I. (Eupleurida) sichuanensis Young, 2008. A key to aposematically coloured species from the Asian continent is presented for the first time. Their mimicry association is further investigated and a new case involving Anthicidae is reported.
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- 2019
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42. Pathogenic and Non-Pathogenic Microorganisms in the Rapid Alert System for Food and Feed.
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Pigłowski M
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- Animals, Asia, Environmental Monitoring, Europe, European Union, Fruit microbiology, Humans, Meat microbiology, Seafood microbiology, South America, Vegetables microbiology, Animal Feed microbiology, Disease Outbreaks statistics & numerical data, Food Contamination analysis, Food Microbiology statistics & numerical data, Food Safety methods, Foodborne Diseases microbiology, Risk Assessment statistics & numerical data
- Abstract
The most frequently notified pathogenic microorganisms in the RASFF in 1980⁻2017 were Salmonella sp., Listeria , Escherichia and Vibrio , whereas, among the notified non-pathogenic microorganisms were unspecified microorganisms, Enterobacteriaceae, Salmonella sp. and Coliforms. Microorganisms were reported mainly in poultry meat, meat, fish, molluscs, crustaceans, fruits, vegetables, herbs, spices, nuts, milk, cereals (in food) and in feed materials and pet food (in feed). The number of notifications decreased at the turn of 2005 and 2006, but has steadily increased since then. The notification basis were official controls, border controls and company's checks. Products were notified mainly by Italy, France, United Kingdom, Germany and Netherlands. The reported products originated from Brazil, European Union countries and India, Thailand and Vietnam. The notification types were alerts, information and border rejections. The distribution status was often not specified or distribution on the market was possible. The risk decision was usually not made. Products were re-dispatched, import was not authorised or products were withdrawn from the market, destroyed and recalled from the market. Proper cooperation within the framework of the RASFF can contribute to shaping public health law and reducing outbreaks associated with microorganisms.
- Published
- 2019
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43. Ancient genomes suggest the eastern Pontic-Caspian steppe as the source of western Iron Age nomads.
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Krzewińska M, Kılınç GM, Juras A, Koptekin D, Chyleński M, Nikitin AG, Shcherbakov N, Shuteleva I, Leonova T, Kraeva L, Sungatov FA, Sultanova AN, Potekhina I, Łukasik S, Krenz-Niedbała M, Dalén L, Sinika V, Jakobsson M, Storå J, and Götherström A
- Subjects
- Asia, Chromosomes, Human, Y, DNA, Mitochondrial, Europe, Asia, Eastern, Genetic Drift, Genetics, Population, Haplotypes, History, Ancient, Humans, Male, White People genetics, Genome, Human genetics, Human Migration history
- Abstract
For millennia, the Pontic-Caspian steppe was a connector between the Eurasian steppe and Europe. In this scene, multidirectional and sequential movements of different populations may have occurred, including those of the Eurasian steppe nomads. We sequenced 35 genomes (low to medium coverage) of Bronze Age individuals (Srubnaya-Alakulskaya) and Iron Age nomads (Cimmerians, Scythians, and Sarmatians) that represent four distinct cultural entities corresponding to the chronological sequence of cultural complexes in the region. Our results suggest that, despite genetic links among these peoples, no group can be considered a direct ancestor of the subsequent group. The nomadic populations were heterogeneous and carried genetic affinities with populations from several other regions including the Far East and the southern Urals. We found evidence of a stable shared genetic signature, making the eastern Pontic-Caspian steppe a likely source of western nomadic groups.
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- 2018
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44. The bacteriome at the onset of type 1 diabetes: A study from four geographically distant African and Asian countries.
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Cinek O, Kramna L, Mazankova K, Odeh R, Alassaf A, Ibekwe MU, Ahmadov G, Elmahi BME, Mekki H, Lebl J, and Abdullah MA
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- Adolescent, Adult, Africa epidemiology, Asia epidemiology, Child, Child, Preschool, Diabetes Mellitus, Type 1 epidemiology, Diabetes Mellitus, Type 1 genetics, Female, High-Throughput Nucleotide Sequencing, Humans, Male, RNA, Bacterial genetics, RNA, Ribosomal, 16S genetics, Young Adult, Bacteria genetics, Diabetes Mellitus, Type 1 microbiology, Feces microbiology, Gastrointestinal Microbiome genetics
- Abstract
Objectives: Gut bacteriome profiling studies in type 1 diabetes (T1D) to date are mostly limited to populations of Europe, with two studies from China and one study each from Mexico and the USA. We therefore sought to characterize the stool bacteriome in children after onset of T1D along with age- and place-matched control subjects from four geographically distant African and Asian countries., Methods: Samples were collected from 73 children and adolescents shortly after T1D onset (Azerbaijan 19, Jordan 20, Nigeria 14, Sudan 20) and 104 matched control subjects of similar age and locale. Genotyping of major T1D susceptibility genes was performed using saliva or blood samples. The bacteriome was profiled by next-generation sequencing of 16S rDNA. Negative binomial regression was used to model associations, with adjustment for the matched structure of the study., Results: A significant positive association with T1D was noted for the genus Escherichia (class Gammaproteobacteria, phylum Proteobacteria), whereas Eubacterium and Roseburia, two genera of class Clostridia, phylum Firmicutes, were inversely associated with T1D. We also confirmed a previously observed inverse association with Clostridium clusters IV or XIVa. No associations were noted for richness, evenness, or enterotypes., Conclusions: Based on our results, some type of distortion of the gut bacteriome appears to be a global feature of T1D, and our findings for four distant populations add new candidates to the existing list of bacteria. It remains to be established whether the observed associations are markers or causative factors., (Copyright © 2018 Elsevier B.V. All rights reserved.)
- Published
- 2018
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45. Biogeography of parasite abundance: latitudinal gradient and distance decay of similarity in the abundance of fleas and mites, parasitic on small mammals in the Palearctic, at three spatial scales.
- Author
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van der Mescht L, Warburton EM, Khokhlova IS, Stanko M, Vinarski MV, Korallo-Vinarskaya NP, and Krasnov BR
- Subjects
- Animals, Asia epidemiology, Biodiversity, Environment, Europe epidemiology, Flea Infestations epidemiology, Flea Infestations parasitology, Host Specificity, Mite Infestations epidemiology, Mite Infestations parasitology, Phylogeography, Rodent Diseases epidemiology, Rodentia, Flea Infestations veterinary, Mite Infestations veterinary, Rodent Diseases parasitology, Shrews parasitology
- Abstract
We tested whether biogeographic patterns characteristic for biological communities can also apply to populations and investigated geographic patterns of variation in abundance of ectoparasites (fleas and mites) collected from bodies of their small mammalian hosts (rodents and shrews) in the Palearctic at continental, regional and local scales. We asked whether (i) there is a relationship between latitude and abundance and (ii) similarity in abundance follows a distance decay pattern or it is better explained by variation in extrinsic biotic and abiotic factors. We analysed the effect of latitude on mean intraspecific abundance using general linear models including proportional abundance of its principal host as an additional predictor variable. Then, we examined the relative effect of geographic distance, biotic and abiotic dissimilarities among regions, subregions or localities on the intraspecific dissimilarity in abundance among regions, subregions or localities using Generalized Dissimilarity Modelling. We found no relationship between latitude and intraspecific flea or mite abundance. In both taxa, environmental dissimilarity explained the largest part of the deviance of spatial variation in abundance, whereas the effect of the dissimilarity in the principal host abundance was of secondary importance and the effect of geographic distance was minor. These patterns were generally consistent across the three spatial scales, although environmental variation and dissimilarity in principal host abundance were equally important at the local scale in fleas but not in mites. We conclude that biogeographic patterns related to latitude and geographic distance do not apply to spatial variation of ectoparasite abundance. Instead, the geographic distribution of abundance in arthropod ectoparasites depends on their responses, mainly to the off-host environment and to a lesser extent the abundance of their principal hosts., (Copyright © 2018 Australian Society for Parasitology. Published by Elsevier Ltd. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
46. From America to Eurasia: a multigenomes history of the genus Abies.
- Author
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Semerikova SA, Khrunyk YY, Lascoux M, and Semerikov VL
- Subjects
- Abies classification, Americas, Asia, Bayes Theorem, Cell Nucleus genetics, DNA, Chloroplast genetics, DNA, Mitochondrial genetics, Ecotype, Europe, Geography, Phylogeny, Time Factors, Abies genetics, Genome, Plant
- Abstract
The origin of conifer genera, the main components of mountain temperate and boreal forests, was deemed to arise in the Mesozoic, although paleontological records and molecular data point to a recent diversification, presumably related to Neogene cooling. The geographical area(s) where the modern lines of conifers emerged remains uncertain, as is the sequence of events leading to their present distribution. To gain further insights into the biogeography of firs (Abies), we conducted phylogenetic analyses of chloroplast, mitochondrial and nuclear markers. The species tree, generated from ten single-copy nuclear genes, yielded probably the best phylogenetic hypothesis available for Abies. The tree obtained from five regions of chloroplast DNA largely corresponded to the nuclear species tree. Ancestral area reconstructions based on fossil calibrated chloroplast DNA and nuclear DNA trees pointed to repeated intercontinental migrations. The mitochondrial DNA haplotype tree, however, disagreed with nuclear and chloroplast DNA trees. It consisted of two clusters: one included mainly American haplotypes, while the other was composed of only Eurasian haplotypes. Presumably, this conflict is due to inter-continental migrations and introgressive hybridization, accompanied by the capture of the mitotypes from aboriginal species by the invading firs. Given that several species inhabiting Northeastern Asia carry American mitotypes and mutations typical for the American cluster, whereas no Asian mitotypes were detected within the American species, we hypothesize that Abies migrated from America to Eurasia, but not in the opposite direction. The direction and age of intercontinental migrations in firs are congruent with other conifers, such as spruces and pines of subsection Strobus, suggesting that these events had the same cause., (Copyright © 2018 Elsevier Inc. All rights reserved.)
- Published
- 2018
- Full Text
- View/download PDF
47. Ability of phages to infect Acinetobacter calcoaceticus-Acinetobacter baumannii complex species through acquisition of different pectate lyase depolymerase domains.
- Author
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Oliveira H, Costa AR, Konstantinides N, Ferreira A, Akturk E, Sillankorva S, Nemec A, Shneider M, Dötsch A, and Azeredo J
- Subjects
- Asia, Base Sequence, Europe, Genome, Viral genetics, Podoviridae classification, Podoviridae genetics, Protein Domains physiology, Virion genetics, Acinetobacter baumannii virology, Acinetobacter calcoaceticus virology, Host Specificity physiology, Podoviridae metabolism, Polygalacturonase metabolism, Polysaccharide-Lyases metabolism
- Abstract
Bacteriophages are ubiquitous in nature and represent a vast repository of genetic diversity, which is driven by the endless coevolution cycle with a diversified group of bacterial hosts. Studying phage-host interactions is important to gain novel insights into their dynamic adaptation. In this study, we isolated 12 phages infecting species of the Acinetobacter baumannii-Acinetobacter calcoaceticus complex which exhibited a narrow host range and similar morphological features (podoviruses with short tails of 9-12 nm and isometric heads of 50-60 nm). Notably, the alignment of the newly sequenced phage genomes (40-41 kb of DNA length) and all Acinetobacter podoviruses deposited in Genbank has shown high synteny, regardless of the date and source of isolation that spans from America to Europe and Asia. Interestingly, the C-terminal pectate lyase domain of these phage tail fibres is often the only difference found among these viral genomes, demonstrating a very specific genomic variation during the course of their evolution. We proved that the pectate lyase domain is responsible for phage depolymerase activity and binding to specific Acinetobacter bacterial capsules. We discuss how this mechanism of phage-host co-evolution impacts the tail specificity apparatus of Acinetobacter podoviruses., (© 2017 Society for Applied Microbiology and John Wiley & Sons Ltd.)
- Published
- 2017
- Full Text
- View/download PDF
48. Dynamic CT myocardial perfusion imaging identifies early perfusion abnormalities in diabetes and hypertension: Insights from a multicenter registry.
- Author
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Vliegenthart R, De Cecco CN, Wichmann JL, Meinel FG, Pelgrim GJ, Tesche C, Ebersberger U, Pugliese F, Bamberg F, Choe YH, Wang Y, and Schoepf UJ
- Subjects
- Aged, Asia, Blood Flow Velocity, Coronary Artery Disease etiology, Coronary Artery Disease physiopathology, Coronary Vessels physiopathology, Diabetic Angiopathies etiology, Diabetic Angiopathies physiopathology, Early Diagnosis, Europe, Female, Humans, Hypertension diagnosis, Male, Middle Aged, Predictive Value of Tests, Prognosis, Registries, Retrospective Studies, Risk Assessment, Risk Factors, United States, Computed Tomography Angiography, Coronary Angiography methods, Coronary Artery Disease diagnostic imaging, Coronary Circulation, Coronary Vessels diagnostic imaging, Diabetic Angiopathies diagnostic imaging, Hypertension complications, Myocardial Perfusion Imaging methods
- Abstract
Background: To identify patients with early signs of myocardial perfusion reduction, a reference base for perfusion measures is needed., Objective: To analyze perfusion parameters derived from dynamic computed tomography perfusion imaging (CTPI) in patients with suspected coronary artery disease (CAD), and relationship with risk factors., Methods: In this multicenter study, coronary CT angiography (cCTA) and dynamic CTPI were performed by second-generation dual-source CT in patients suspected of CAD. Risk factors were collected from hospital records. Patients with visual perfusion defects on CTPI, previous coronary intervention, or missing risk factor details were excluded. This analysis included 98 patients (mean age ± standard deviation [SD], 59.0 ± 8.6yrs; 73 male). Global measures of left ventricular myocardial blood flow (MBF), myocardial blood volume (MBV) and volume transfer constant (K(trans)) were calculated., Results: Mean MBF was 139.3 ± 31.4 mL/100 mL/min, MBV 19.1 ± 2.7 mL/100 mL, and Ktrans 85.0 ± 17.5 mL/100 mL/min. No significant differences in perfusion parameters were found by gender or age category. Hypertension and diabetes mellitus resulted in lower perfusion parameters (hypertension vs normotension: MBV 18.5 ± 3.0 vs 19.7 ± 2.3 mL/100 mL and K(trans) 82.0 ± 18.0 vs 89.0 ± 16.0, p < 0.05; diabetes vs no diabetes: MBF 128.5 ± 31.5 vs 144.0 ± 30.5 mL/100 mL/min and MBV 17.9 ± 2.4 vs 19.4 ± 2.8 mL/100 mL, p < 0.05). In patients with hyperlipidemia, MBF was higher (146.8 ± 34.4 vs 130.7 ± 24.3 mL/100 mL/min, p < 0.05). Smoking and family history did not show perfusion parameter differences., Conclusions: Dynamic CTPI identifies early perfusion disturbances in conditions like diabetes and hypertension. With further standardization, absolute perfusion measures may improve CAD risk stratification in patients without visual perfusion defects., (Copyright © 2016 Society of Cardiovascular Computed Tomography. Published by Elsevier Inc. All rights reserved.)
- Published
- 2016
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49. Distinguishing commercially grown Ganoderma lucidum from Ganoderma lingzhi from Europe and East Asia on the basis of morphology, molecular phylogeny, and triterpenic acid profiles.
- Author
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Hennicke F, Cheikh-Ali Z, Liebisch T, Maciá-Vicente JG, Bode HB, and Piepenbring M
- Subjects
- Asia, Belgium, China, Europe, Fruiting Bodies, Fungal chemistry, Molecular Structure, Spectrometry, Mass, Electrospray Ionization, Ganoderma chemistry, Phylogeny, Triterpenes chemistry, Triterpenes isolation & purification
- Abstract
In China and other countries of East Asia, so-called Ling-zhi or Reishi mushrooms are used in traditional medicine since several centuries. Although the common practice to apply the originally European name 'Ganoderma lucidum' to these fungi has been questioned by several taxonomists, this is still generally done in recent publications and with commercially cultivated strains. In the present study, two commercially sold strains of 'G. lucidum', M9720 and M9724 from the company Mycelia bvba (Belgium), are compared for their fruiting body (basidiocarp) morphology combined with molecular phylogenetic analyses, and for their secondary metabolite profile employing an ultra-performance liquid chromatography-electrospray ionization mass spectrometry (UPLC-ESIMS) in combination with a high resolution electrospray ionization mass spectrometry (HR-ESI-MS). According to basidiocarp morphology, the strain M9720 was identified as G. lucidum s.str. whereas M9724 was determined as Ganoderma lingzhi. In molecular phylogenetic analyses, the M9720 ITS and beta-tubulin sequences grouped with sequences of G. lucidum s.str. from Europe whereas those from M9724 clustered with sequences of G. lingzhi from East Asia. We show that an ethanol extract of ground basidiocarps from G. lucidum (M9720) contains much less triterpenic acids than found in the extract of G. lingzhi (M9724). The high amount of triterpenic acids accounts for the bitter taste of the basidiocarps of G. lingzhi (M9724) and of its ethanol extract. Apparently, triterpenic acids of G. lucidum s.str. are analyzed here for the first time. These results demonstrate the importance of taxonomy for commercial use of fungi., (Copyright © 2016 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2016
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50. The 5300-year-old Helicobacter pylori genome of the Iceman.
- Author
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Maixner F, Krause-Kyora B, Turaev D, Herbig A, Hoopmann MR, Hallows JL, Kusebauch U, Vigl EE, Malfertheiner P, Megraud F, O'Sullivan N, Cipollini G, Coia V, Samadelli M, Engstrand L, Linz B, Moritz RL, Grimm R, Krause J, Nebel A, Moodley Y, Rattei T, and Zink A
- Subjects
- Asia, Chromosome Mapping, DNA, Bacterial genetics, DNA, Bacterial isolation & purification, Europe, Helicobacter pylori isolation & purification, Human Migration, Humans, Ice Cover microbiology, Mummies microbiology, Phylogeny, Phylogeography, Sequence Analysis, DNA, Genome, Bacterial genetics, Helicobacter Infections microbiology, Helicobacter pylori genetics, Hybridization, Genetic, Stomach microbiology
- Abstract
The stomach bacterium Helicobacter pylori is one of the most prevalent human pathogens. It has dispersed globally with its human host, resulting in a distinct phylogeographic pattern that can be used to reconstruct both recent and ancient human migrations. The extant European population of H. pylori is known to be a hybrid between Asian and African bacteria, but there exist different hypotheses about when and where the hybridization took place, reflecting the complex demographic history of Europeans. Here, we present a 5300-year-old H. pylori genome from a European Copper Age glacier mummy. The "Iceman" H. pylori is a nearly pure representative of the bacterial population of Asian origin that existed in Europe before hybridization, suggesting that the African population arrived in Europe within the past few thousand years., (Copyright © 2016, American Association for the Advancement of Science.)
- Published
- 2016
- Full Text
- View/download PDF
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