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This paper proposes an improved attitude estimation algorithm based on the extended Kalman filter (EKF), and it is applied to suppress the accuracy reduction in attitude estimation caused by fusing magnetometer data under large angular motion. In the proposed attitude estimation structure, the approximate variance of the estimated horizontal northbound magnetic vector is used to dynamically adjust the participation of magnetometer data in attitude estimation, as the approximate variance increases significantly under large angular motion and fusing magnetometer data will reduce estimation accuracy. A three-axis position-velocity controlled turntable is used to conduct rocking experiments for validating the proposed attitude estimation algorithm. The results show a significant improvement in yaw angle estimation accuracy with the proposed attitude estimation algorithm and correspondingly enhance the distribution of pitch and roll angle errors. [ABSTRACT FROM AUTHOR]