1. Why Replacing Different Oxygens of Thymine with Sulfur Causes Distinct Absorption and Intersystem Crossing
- Author
-
Mario Barbatti, Shuming Bai, Institut de Chimie Radicalaire (ICR), Aix Marseille Université (AMU)-Institut de Chimie du CNRS (INC)-Centre National de la Recherche Scientifique (CNRS), ANR-11-IDEX-0001,Amidex,INITIATIVE D'EXCELLENCE AIX MARSEILLE UNIVERSITE(2011), and ANR-10-EQPX-0029,EQUIP@MESO,Equipement d'excellence de calcul intensif de Mesocentres coordonnés - Tremplin vers le calcul petaflopique et l'exascale(2010)
- Subjects
basis-sets ,Absorption spectroscopy ,6-aza-2-thiothymine ,dna ,4-dithiothymine ,010402 general chemistry ,Photochemistry ,01 natural sciences ,Molecular physics ,chemistry.chemical_compound ,0103 physical sciences ,orbital methods ,Molecule ,Singlet state ,Physical and Theoretical Chemistry ,Triplet state ,density-functional theory ,Molecular Structure ,010304 chemical physics ,photosensitization ,0104 chemical sciences ,Thymine ,Oxygen ,[CHIM.THEO]Chemical Sciences/Theoretical and/or physical chemistry ,excited-state dynamics ,4-thiothymidine ,Intersystem crossing ,chemistry ,triplet-state ,13. Climate action ,Quantum Theory ,Density functional theory ,Absorption (chemistry) ,Sulfur - Abstract
WOS:000381778400004; International audience; Recent experiments replacing oxygen atoms by sulfur in thymine have revealed that absorption and intersystem crossing properties of these derivatives are strongly dependent on the position and number of the substitutions, affecting their potential performance for photodynamical therapy. Using multireference quantum chemical methods (CASPT2 and DFT/MRCI), we calculated absorption spectra and spin orbit coupling matrix elements for thymine (Thy), 2-thiothymine (2tThy), 4-thiothymine (4tThy), and 2,4-dithiothymine (2,4dtThy), to investigate this relation between structure and photophysics. The simulations showed that a simple 4-electrons/4-orbital minimum model can explain the main experimentally observed spectral features. Moreover, the computational estimate of intersystem crossing lifetimes in this sequence of molecules revealed that the experimental value attributed to thymine in water might be underestimated by a factor 20, most probably due to an overlap of singlet/triplet absorption signals in the transient absorption spectrum. The difference between the absorptivity of 2tThy and 2tThd was also investigated, but no conclusive explanation could be found.
- Published
- 2016
- Full Text
- View/download PDF