40 results on '"Wingfield, Michael J."'
Search Results
2. No to Neocosmospora: Phylogenomic and Practical Reasons for Continued Inclusion of the Fusarium solani Species Complex in the Genus Fusarium
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O’Donnell, Kerry, Al-Hatmi, Abdullah MS, Aoki, Takayuki, Brankovics, Balázs, Cano-Lira, José F, Coleman, Jeffrey J, de Hoog, G Sybren, Di Pietro, Antonio, Frandsen, Rasmus JN, Geiser, David M, Gibas, Connie FC, Guarro, Josep, Kim, Hye-Seon, Kistler, H Corby, Laraba, Imane, Leslie, John F, López-Berges, Manuel S, Lysøe, Erik, Meis, Jacques F, Monod, Michel, Proctor, Robert H, Rep, Martijn, Ruiz-Roldán, Carmen, Šišić, Adnan, Stajich, Jason E, Steenkamp, Emma T, Summerell, Brett A, van der Lee, Theo AJ, van Diepeningen, Anne D, Verweij, Paul E, Waalwijk, Cees, Ward, Todd J, Wickes, Brian L, Wiederhold, Nathan P, Wingfield, Michael J, Zhang, Ning, and Zhang, Sean X
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Microbiology ,Biological Sciences ,Infectious Diseases ,Infection ,Good Health and Well Being ,Antifungal Agents ,Fusarium ,Phylogeny ,clinical mycology ,evolution ,fungi ,phylogenetics ,taxonomy ,Immunology - Abstract
This article is to alert medical mycologists and infectious disease specialists of recent name changes of medically important species of the filamentous mold FusariumFusarium species can cause localized and life-threating infections in humans. Of the 70 Fusarium species that have been reported to cause infections, close to one-third are members of the Fusarium solani species complex (FSSC), and they collectively account for approximately two-thirds of all reported Fusarium infections. Many of these species were recently given scientific names for the first time by a research group in the Netherlands, but they were misplaced in the genus Neocosmospora In this paper, we present genetic arguments that strongly support inclusion of the FSSC in Fusarium There are potentially serious consequences associated with using the name Neocosmospora for Fusarium species because clinicians need to be aware that fusaria are broadly resistant to the spectrum of antifungals that are currently available.
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- 2020
3. No to Neocosmospora: Phylogenomic and Practical Reasons for Continued Inclusion of the Fusarium solani Species Complex in the Genus Fusarium.
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O'Donnell, Kerry, Al-Hatmi, Abdullah MS, Aoki, Takayuki, Brankovics, Balázs, Cano-Lira, José F, Coleman, Jeffrey J, de Hoog, G Sybren, Di Pietro, Antonio, Frandsen, Rasmus JN, Geiser, David M, Gibas, Connie FC, Guarro, Josep, Kim, Hye-Seon, Kistler, H Corby, Laraba, Imane, Leslie, John F, López-Berges, Manuel S, Lysøe, Erik, Meis, Jacques F, Monod, Michel, Proctor, Robert H, Rep, Martijn, Ruiz-Roldán, Carmen, Šišić, Adnan, Stajich, Jason E, Steenkamp, Emma T, Summerell, Brett A, van der Lee, Theo AJ, van Diepeningen, Anne D, Verweij, Paul E, Waalwijk, Cees, Ward, Todd J, Wickes, Brian L, Wiederhold, Nathan P, Wingfield, Michael J, Zhang, Ning, and Zhang, Sean X
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Fusarium ,Antifungal Agents ,Phylogeny ,clinical mycology ,evolution ,fungi ,phylogenetics ,taxonomy ,Infectious Diseases ,Infection - Abstract
This article is to alert medical mycologists and infectious disease specialists of recent name changes of medically important species of the filamentous mold Fusarium Fusarium species can cause localized and life-threating infections in humans. Of the 70 Fusarium species that have been reported to cause infections, close to one-third are members of the Fusarium solani species complex (FSSC), and they collectively account for approximately two-thirds of all reported Fusarium infections. Many of these species were recently given scientific names for the first time by a research group in the Netherlands, but they were misplaced in the genus Neocosmospora In this paper, we present genetic arguments that strongly support inclusion of the FSSC in Fusarium There are potentially serious consequences associated with using the name Neocosmospora for Fusarium species because clinicians need to be aware that fusaria are broadly resistant to the spectrum of antifungals that are currently available.
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- 2020
4. Calonectria species, including four novel taxa, associated with Eucalyptus in Malaysia
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Pham, Nam Q., Marincowitz, Seonju, Chen, ShuaiFei, Yaparudin, Yani, and Wingfield, Michael J.
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- 2022
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5. Diversity of Calonectria species from leaves and soils in diseased southern China Eucalyptus plantation.
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Liu, QianLi, Wingfield, Michael J., Duong, Tuan A., Wingfield, Brenda D., and Chen, ShuaiFei
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ELONGATION factors (Biochemistry) , *FUNGI classification , *RNA polymerases , *SPECIES distribution , *PLANT diseases , *EUCALYPTUS - Abstract
Calonectria leaf blight (CLB) is one of the best-known diseases of Eucalyptus spp., particularly in Asia and South America. Recently, typical symptoms of leaf and shoot blight caused by Calonectria spp. Were observed in a Eucalyptus plantation in the YunNan Province of southwestern China. Isolations were made from diseased leaves and top soil collected below the diseased trees to determine the causal agent of the disease and to consider the distribution characteristics of the Calonectria species. This resulted in 417 isolates, of which 228 were from leaves and 189 were from soil. Based on comparisons of DNA sequences for the act (actin), cmdA (calmodulin), his3 (histone H3), rpb2 (the second largest subunit of RNA polymerase), tef1 (translation elongation factor 1-alpha) and tub2 (β-tubulin) gene regions, as well as morphological characteristics, 11 Calonectria species were identified. These included Calonectria aciculata (0.7 %), Ca. colhounii (1.2 %), Ca. eucalypti (10.6 %) and Ca. honghensis (43.2 %) in the Ca. colhounii species complex, and Ca. aconidialis (15.3 %), Ca. asiatica (9.8 %), Ca. hongkongensis (1.0 %), Ca. ilicicola (6.0 %), Ca. kyotensis (0.5 %), and Ca. yunnanensis (11.3 %) in the Ca. kyotensis species complex. In addition, a novel species, accounting for 0.5 % of the isolates, was discovered and is described here as Ca. dianii sp. nov. in the Ca colhounii species complex. Most (99.1 %) of the isolates collected from the leaves resided in the Ca. colhounii species complex and a majority (95.8 %) of those from the soils were in Ca. kyotensis species complex. These results suggest that Calonectria spp. in the Ca. colhounii species complex infecting leaves might be adapted to that niche and that those in the Ca. kyotensis species complex are better adapted to a soil habitat. Calonectria leaf blight (CLB) is one of the best-known diseases of Eucalyptus spp., particularly in Asia and South America. A large number of Calonectria isolates were obtained from diseased leaves and soil samples collected from below the infected Eucalyptus trees in one plantation in China. A rich Calonectria diversity in the sampled Eucalyptus plantation were revealed. There were clear differences in species diversity and distribution relating to either the leaf or soil environments where they were found. It is becoming increasingly apparent that some species are predominantly soil inhabitants and different to those that cause plant diseases. [ABSTRACT FROM AUTHOR]
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- 2024
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6. A new genus and species of Cryphonectriaceae causing stem cankers on plantation eucalypts in South Africa.
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Suzuki, Hiroyuki, Marincowitz, Seonju, Roux, Jolanda, Paap, Trudy, Wingfield, Brenda D., and Wingfield, Michael J.
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EUCALYPTUS ,SPECIES ,EUCALYPTUS grandis ,RIBOSOMAL DNA ,PLANTATIONS ,TREE farms - Abstract
Fungi in the Cryphonectriaceae are important canker pathogens of woody shrubs and trees in the Melastomataceae and Myrtaceae (Myrtales). During 2021 disease surveys in KwaZulu‐Natal (South Africa) plantations, a serious stem canker disease was discovered on species of Eucalyptus and Corymbia. The cankers had structures on their surfaces typical of fungi in the Cryphonectriaceae. The aims of the study were to identify the fungus associated with the disease and to test its pathogenicity. Morphological characteristics of both sexual and asexual structures and phylogenetic analyses based on partial sequences of the conserved nuclear large subunit (LSU) ribosomal DNA, the internal transcribed spacer (ITS) regions including the 5.8S gene of the ribosomal DNA operon, and two β‐tubulin (BT1/BT2) regions were used for identification purposes. Phylogenetic analyses of the sequence data and morphological characteristics supported the establishment of a new genus in the Cryphonectriaceae, for which the name Xanthoporthe myrticola gen. et sp. nov. is provided. Pathogenicity trials showed that isolates were pathogenic on tested Eucalyptus grandis and hybrids as well as Corymbia henryi. The results suggest that this is an emerging pathogen that could influence the sustainability of plantation forestry in South Africa. [ABSTRACT FROM AUTHOR]
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- 2024
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7. Phylogenetic and Morphological Re-Evaluation of the Botryosphaeria Species Causing Diseases of Mangifera indica
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Slippers, Bernard, Johnson, Greg I., Crous, Pedro W., Coutinho, Teresa A., Wingfield, Brenda D., and Wingfield, Michael J.
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- 2005
8. Two New Species of Fusarium Section Liseola Associated with Mango Malformation
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Britz, Henriette, Steenkamp, Emma T., Coutinho, Teresa A., Wingfield, Brenda D., and Wingfield, Michael J.
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- 2002
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9. Variation in Botryosphaeriaceae from Eucalyptus plantations in YunNan Province in southwestern China across a climatic gradient
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Li, Guoqing, Slippers, Bernard, Wingfield, Michael J., and Chen, Shuaifei
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- 2020
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10. New Botryosphaeriales on native red milkwood (Mimusops caffra)
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Jami, Fahimeh, Marincowitz, Seonju, Slippers, Bernard, and Wingfield, Michael J.
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- 2018
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11. Uromycladium acaciae, the cause of a sudden, severe disease epidemic on Acacia mearnsii in South Africa
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McTaggart, Alistair R., Doungsa-ard, Chanintorn, Wingfield, Michael J., and Roux, Jolanda
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- 2015
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12. Taxonomy and phylogeny of the Leptographium procerum complex, including Leptographium sinense sp. nov. and Leptographium longiconidiophorum sp. nov.
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Yin, Mingliang, Duong, Tuan A., Wingfield, Michael J., Zhou, XuDong, and de Beer, Z. Wilhelm
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- 2015
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13. Seven New Species of the Botryosphaeriaceae from Baobab and Other Native Trees in Western Australia
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Pavlic, Draginja, Wingfield, Michael J., Barber, Paul, Slippers, Bernard, Hardy, Giles E. St. J., and Burgess, Treena I.
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- 2008
14. Teratosphaeria pseudonubilosa sp. nov., a serious Eucalyptus leaf pathogen in the Teratosphaeria nubilosa species complex
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Pérez, Guillermo, Burgess, Treena I., Slippers, Bernard, Carnegie, Angus J., Wingfield, Brenda D., and Wingfield, Michael J.
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- 2014
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15. Surveys of soil and water reveal a goldmine of Phytophthora diversity in South African natural ecosystems
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Oh, Eunsung, Gryzenhout, Marieka, Wingfield, Brenda D., Wingfield, Michael J., and Burgess, Treena I.
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- 2013
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16. A new Ophiostoma species from loblolly pine roots in the southeastern United States
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Zanzot, James W., de Beer, Z. Wilhelm, Eckhardt, Lori G., and Wingfield, Michael J.
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- 2010
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17. Soil-borne Calonectria (Hypocreales, Nectriaceae) associated with Eucalyptus plantations in Colombia.
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Pham, Nam Q., Marincowitz, Seonju, Chen, Shuai Fei, Rodas, Carlos A., and Wingfield, Michael J.
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EUCALYPTUS ,TREE farms ,PLANTATIONS ,HYPOCREALES ,NUCLEOTIDE sequence ,SOIL sampling - Abstract
Eucalyptus spp. are widely planted in Colombia as an important component of a growing paper and pulp industry. Leaf and shoot blight caused by Calonectria spp. was one of the first disease problems to emerge in these plantations. A survey of Eucalyptus plantations in four forestry regions of Colombia during 2016 resulted in a large number of Calonectria isolates from soil samples collected in the understories of trees having symptoms of Calonectria leaf and shoot blight. The aim of this study was to identify and resolve the phylogenetic relationships for these isolates using DNA sequence comparisons of six gene regions as well as morphological characters. From a collection of 107 isolates, seven Calonectria species residing in three species complexes were identified. Two of these represented undescribed species, namely C. exiguispora sp. nov. and C. guahibo sp. nov. Calonectria parvispora and C. spathulata were the most commonly isolated species, each of which accounted for approximately 30% of the isolates. The results suggest that Colombia has a wide diversity of Calonectria spp. and that these could challenge Eucalyptus plantation forestry in the future. [ABSTRACT FROM AUTHOR]
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- 2022
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18. Diversity and Distribution of Calonectria Species from Plantation and Forest Soils in Fujian Province, China.
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Liu, Qianli, Wingfield, Michael J., Duong, Tuan A., Wingfield, Brenda D., and Chen, Shuaifei
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FOREST soils , *TREE farms , *SPECIES distribution , *EUCALYPTUS , *CHINA fir , *WOOD-pulp , *RNA polymerases - Abstract
To meet the growing demand for wood and pulp products, Eucalyptus plantations have expanded rapidly during the past two decades, becoming an integral part of the southern China landscape. Leaf blight caused by various Calonectria spp., is a serious threat to these plantations. In order to explore the diversity and distribution of Calonectria spp. in Fujian Province soils, samples were collected in Eucalyptus plantations and adjacent plantings of Cunninghamia lanceolata, Phyllostachys heterocycle and Pinus massoniana as well as in natural forests. Three hundred and fifty-three Calonectria isolates were recovered from soil samples and they were identified based on a comparison of multilocus DNA sequence data for the act (actin), cmdA (calmodulin), his3 (histone H3), rpb2 (the second largest subunit of RNA polymerase), tef1 (translation elongation factor 1-alpha) and tub2 (β-tubulin) gene regions, as well as morphological characteristics. Six known taxa including Calonectria aconidialis, Ca. hongkongensis, Ca. ilicicola, Ca. kyotensis, Ca. pacifica, Ca. pseudoreteaudii and one novel species described here as Ca. minensis sp. nov. were identified. Of these, Ca. aconidialis and Ca. kyotensis were the most prevalent species, and found in eight and seven sites, and four and five forest types, respectively. Calonectria spp. were most abundant in soils from Eucalyptus stands, followed by P. heterocycle and natural forests. Relatively few species were found in the soils associated with Cunninghamia lanceolata and Pinus massoniana. The abundance of known Calonectria spp. suggests that these fungi have been relatively well sampled in Fujian. The results are also consistent with the fact that most Calonectria diseases are found on Angiosperm as opposed to Gymnosperm plants. [ABSTRACT FROM AUTHOR]
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- 2022
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19. The granulate ambrosia beetle, Xylosandrus crassiusculus (Coleoptera Curculionidae, Scolytinae), and its fungal symbiont found in South Africa
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Nel, Wilma J., Beer, Z. Wilhelm De, Wingfield, Michael J., and Duong, Tuan A.
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Biodiversity ,Taxonomy - Abstract
Nel, Wilma J., Beer, Z. Wilhelm De, Wingfield, Michael J., Duong, Tuan A. (2020): The granulate ambrosia beetle, Xylosandrus crassiusculus (Coleoptera Curculionidae, Scolytinae), and its fungal symbiont found in South Africa. Zootaxa 4838 (3): 427-435, DOI: https://doi.org/10.11646/zootaxa.4838.3.7
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- 2020
20. Characterisation of the Coniothyrium stem canker pathogen onEucalyptus camaldulensis in Ethiopia
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Gezahgne, Alemu, Cortinas, Maria-Noel, Wingfield, Michael J, and Roux, Jolanda
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- 2005
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21. A newLeptographium species associated withTomicus piniperda in south-western China
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Dong Zhou, Xu, Jacobs, Karin, Morelet, Michel, Ye, Hui, Lieutier, Francois, and Wingfield, Michael J.
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- 2000
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22. Botryosphaeriaceae diversity on Eucalyptus clones in different climate zones of Indonesia.
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Jami, Fahimeh, Marincowitz, Seonju, Durán, Alvaro, Slippers, Bernard, Abad, Jupiter I. M., Chen, ShuaiFei, and Wingfield, Michael J.
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BOTRYOSPHAERIACEAE ,PLANT clones ,EUCALYPTUS ,CLIMATIC zones ,MYCOSES ,WOODY plants - Abstract
The Botryosphaeriaceae is an important and diverse family of latent fungal pathogens of woody plants, including Eucalyptus. These fungi live within infected plant tissues for extended periods without causing symptoms, but emerge to cause severe disease when their hosts are subjected to stress. In this study, we compared the diversity of the Botryosphaeriaceae in samples from nine different Eucalyptus clones growing in North and Central Sumatra, Indonesia, having distinct climates. Samples were taken from asymptomatic trees as well as those damaged by a sucking insect (Helopeltis sp.: Miridae), a stem boring moth (Polyphagozerra coffeae: Cossidae) and a Eucalyptus scab and shoot malformation fungal disease caused by Elsinoe necatrix. In total, 215 Botryosphaeriaceae isolates were obtained from which 13 species were identified based on rDNA‐ITS, TEF‐1α, β‐tubulin and rpb2 sequence data. These species included seven Lasiodiplodia species, four Neofusicoccum species as well as Endomelanconiopsis endophytica and Cophinforma atrovirens. A new species of Lasiodiplodia arose from collections and for which the name L. riauensis is provided. Two species, L. theobromae and L. brasiliensis, were found in both climatic zones, whereas other species were specific to the areas from which they were collected. No correlation was found between the Botryosphaeriaceae species diversity and damage to trees caused by insects or E. necatrix disease. [ABSTRACT FROM AUTHOR]
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- 2022
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23. Phylogenetic re-evaluation of the Grosmannia penicillata complex (Ascomycota, Ophiostomatales), with the description of five new species from China and USA.
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Yin, Mingliang, Wingfield, Michael J., Zhou, Xudong, and de Beer, Z. Wilhelm
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BARK beetles , *WOOD-decaying fungi , *SPECIES , *STAINS & staining (Microscopy) , *CALMODULIN , *ASCOMYCETES , *FUNGAL communities - Abstract
The Grosmannia penicillata complex (Ophiostomatales, Ascomycota) is one of the major species complexes in Leptographium sensu lato. Most of these are wood staining fungi associated with conifer-infesting bark beetles, and the complex encompasses the type species of the genus Grosmannia. Yet the phylogenetic relationships of species within the complex is unresolved. The aim of this study was to re-evaluate the circumscriptions of all known species in the G. penicillata complex, as well as isolates resembling G. penicillata obtained from a recent survey in China. Phylogenetic analyses of four gene regions: Internal transcribed spacer 2 and large subunit (ITS2-LSU), beta-tubulin (TUB), calmodulin (CAL), and translation elongation factor 1 alpha (TEF-1α) resolved the relationships of 15 species, including four new species (Grosmannia xianmiense sp nov., Grosmannia purpurea sp. nov., Grosmannia crassifolia sp. nov. and Grosmannia maixiuense sp. nov.), from China. Some isolates from pine in the USA that had previously been identified as Grosmannia abietina , represented a distinct taxon that is described here as Grosmannia xeno-abietina sp. nov. • Phylogenetic analyses of four gene regions (ITS2-LSU, β-tubulin, calmodulin, translation elongation factor 1-α) were used. • Four new species from China and one new species from USA associated with conifer-infesting bark beetles were described. • One lectotype was designated, and seven new combinations were provided. [ABSTRACT FROM AUTHOR]
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- 2020
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24. Taxonomy and phylogeny of the Leptographium olivaceum complex (Ophiostomatales, Ascomycota), including descriptions of six new species from China and Europe.
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Mingliang Yin, Wingfield, Michael J., Xudong Zhou, Linnakoski, Riikka, and de Beer, Z. Wilhelm
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BARK beetles , *PHYLOGENY , *SPECIES , *TAXONOMY , *EPITOPES , *ASCOMYCETES , *FUNGAL communities - Abstract
The Leptographium olivacea complex encompasses species in the broadly defined genus Leptographium (Ophiostomatales, Ascomycota) that are generally characterized by synnematous conidiophores. Most species of the complex are associates of conifer-infesting bark beetles in Europe and North America. The aims of this study were to reconsider the delineation of known species, and to confirm the identity of several additional isolates resembling L. olivacea that have emerged from recent surveys in China, Finland, Poland, Russia, and Spain. Phylogenetic analyses of sequence data for five loci (ACT, TUB, CAL, ITS2-LSU, and TEF-1α) distinguished 14 species within the complex. These included eight known species (L. cucullatum, L. davidsonii, L. erubescens, L. francke-grosmanniae, L. olivaceum, L. olivaceapini, L. sagmatosporum, and L. vescum) and six new species (herein described as L. breviuscapum, L. conplurium, L. pseudoalbum, L. rhizoidum, L. sylvestris, and L. xiningense). New combinations are provided for L. cucullatum, L. davidsonii, L. erubescens, L. olivaceum, L. olivaceapini, L. sagmatosporum and L. vescum. New Typifications: Lectotypes are designated for L. olivaceum, L. erubescens and L. sagmatosporum. Epitypes were designated for L. olivaceapini and L. sagmatosporum. In addition to phylogenetic separation, the synnematous asexual states and ascomata with almost cylindrical necks and prominent ostiolar hyphae, distinguish the L. olivaceum complex from others in Leptographium. [ABSTRACT FROM AUTHOR]
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- 2019
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25. Ten new species of Calonectria from Indonesia and Vietnam.
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Pham, Nam Q., Barnes, Irene, Chen, ShuaiFei, Liu, FeiFei, Dang, Quynh N., Pham, Thu Q., Lombard, Lorenzo, Crous, Pedro W., and Wingfield, Michael J.
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TREE farms ,FUNGI imperfecti ,NUCLEOTIDE sequence ,PLANT diseases - Abstract
Vietnam and Indonesia have rapidly growing and extensive plantation forestry programs, especially of Acacia spp. and Eucalyptus spp. As these plantations expand, the threat from pests and diseases also increases. Calonectria species are among those pathogens causing diseases of trees in plantations and nurseries in these countries. Extensive surveys were conducted across plantations and nurseries of Vietnam and parts of Indonesia, where a large number of Calonectria isolates were retrieved from diseased leaves and soils associated with symptomatic trees. The aim of this study was to identify and resolve the phylogenetic relationships among these isolates using DNA sequence comparisons of four gene regions as well as morphological characters. From a collection of 165 isolates, the study revealed five known and 10 undescribed species. The relatively high diversity of Calonectria species found in this study supports the view that many more species in this genus remain to be discovered in other areas of Southeast Asia. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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26. New species of Cylindrocladiella from plantation soils in South-East Asia.
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Pham, Nam Q., Barnes, Irene, ShuaiFei Chen, Pham, Thu Q., Lombard, Lorenzo, Crous, Pedro W., and Wingfield, Michael J.
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SOIL fungi ,SAPROPHYTES - Abstract
Cylindrocladiella spp. are widely distributed especially in tropical and sub-tropical regions, where they are mainly known as saprobes although some species are plant pathogens. Very little is known about these fungi in South-East Asia. The aim of this study was to identify a collection of Cylindrocladiella isolates from soils collected in forest nurseries and plantations in Vietnam and Malaysia. This was achieved using DNA sequence comparisons and morphological observations. The study revealed two previously described species, Cy. lageniformis and Cy. peruviana as well as five novel taxa, described here as Cy. arbusta sp. nov., Cy. malesiana sp. nov., Cy. obpyriformis sp. nov., Cy. parvispora sp. nov. and Cy. solicola sp. nov. A relatively small collection of isolates from a limited geographic sampling revealed an unexpectedly high level of Cylindrocladiella diversity suggesting that many more species in this genus await discovery in South-East Asia. [ABSTRACT FROM AUTHOR]
- Published
- 2018
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27. Multigene phylogenies and morphological characterization of five new Ophiostoma spp. associated with spruce-infesting bark beetles in China.
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Yin, Mingliang, Wingfield, Michael J., Zhou, Xudong, and de Beer, Z. Wilhelm
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FUNGAL phylogeny , *FUNGAL morphology , *OPHIOSTOMA , *SPRUCE bark beetles , *PATHOGENIC fungi , *TIMBER - Abstract
Ophiostoma spp. (Ophiostomatales, Ascomycota) are well-known fungi associated with bark beetles (Coleoptera: Scolytinae). Some of these are serious tree pathogens, while the majority is blue-stain agents of timber. In recent years, various bark beetle species have been attacking spruce forests in Qinghai province, China, causing significant damage. A preliminary survey was done to explore the diversity of the ophiostomatoid fungal associates of these beetles. The aims of the present study were to identify and characterize new Ophiostoma spp. associated with spruce-infesting bark beetles in Qinghai Province, and to resolve phylogenetic relationships of Ophiostoma spp. related to the Chinese isolates, using multigene phylogenetic analyses. Results obtained from four gene regions (ribosomal internal transcribed spacer regions, β-tubulin, calmodulin, translation elongation factor-1α) revealed five new Ophiostoma spp. from Qinghai. These included O. nitidus sp. nov., O. micans sp. nov., and O. qinghaiense sp. nov. in a newly defined O. piceae complex. The other two new species, O. poligraphi sp. nov. and O. shangrilae sp. nov., grouped in the O. brunneo-ciliatum complex. Based on DNA sequence and morphological comparisons, we also show that O. arduennense and O. torulosum are synonyms of O. distortum , while O. setosum is a synonym of O. cupulatum . [ABSTRACT FROM AUTHOR]
- Published
- 2016
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28. Steinernema fabii n. sp. (Rhabditida: Steinernematidae), a new entomopathogenic nematode from South Africa.
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ABATE, Birhan A., MALAN, Antoinette P., TIEDT, Louwrens R., WINGFIELD, Michael J., SLIPPERS, Bernard, and HURLEY, Brett P.
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STEINERNEMA ,STEINERNEMATIDAE ,NEMATODE physiology ,INSECT genetics ,RHABDITIDA - Abstract
A new species of entomopathogenic nematode, Steinernema fabii n. sp., was isolated by trapping with wax moth (Galleria mellonella) larvae from soil in an Acacia meamsii plantation in the Mpumalanga province of South Africa. The new species is morphologically characterised by the length of the infective juvenile (IJ) of 641 (590-697) pm, by a tail length of 58 (52-64) pm, ratio a = 24 (21-41), H% = 53 (37-61) and E% = 93 (83-105). The pattern of the lateral field of the IJ of the new species is 2, 5, 2 ridges (3, 6, 3 incisures). The male of the first generation can be recognised by the long spicule of 90 (79-106) pm and gubernaculum of 66 (56-77) pm; D% = 64 (52-75) and GS% = 73 (63-86). The first generation female can be recognised by a protruding vulva with a short, double-flapped epiptygmata, and the lack of a postanal swelling, while the second generation differs in having a postanal swelling and a conical, sharply pointed tail. Analysis of DNA sequences for the ITS and D2-D3 gene regions showed S. fabii n. sp. to differ from all other Steinernema species and to belong to a new monophyletic group, the 'Cameroonian' clade, consisting of S. cameroonense, S. nyetense, S. sacchari and S. fabii n. sp., all from the African continent. This group is closely related to species in the feltiae-kraussei-oregonense Clade III. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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29. Ganoderma species, including new taxa associated with root rot of the iconic Jacaranda mimosifolia in Pretoria, South Africa.
- Author
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Coetzee, Martin P. A., Marincowitz, Seonju, Muthelo, Vuledzani G., and Wingfield, Michael J.
- Subjects
GANODERMA ,TAXONOMY ,BUTT rots ,NUCLEOTIDE sequence - Abstract
Jacaranda mimosifolia trees have been progressively dying due to Ganoderma root and butt rot disease in Pretoria (the "City of Jacarandas") for many years. Ganoderma austroafricanum was described from these trees previously but this was based on a single collection. This study treats a substantially expanded collection of isolates of Ganoderma made from all dying trees where basidiomes were present in a Pretoria suburb. DNA sequences were obtained from the ITS and LSU region for the isolates and compared against sequences on GenBank. Phylogenetic analyses were used to compare sequences with those for other Ganoderma species. Based on sequence comparisons and morphological characters, two new Ganoderma species were discovered and these are described here as G. enigmaticum and G. destructans spp. nov. Interestingly, the previously described G. austroafricanum was not found, G. enigmaticum was found on only one Ceratonia siliqua tree and G. destructans was found on all other trees sampled. The latter species appears to be the primary cause of root rot of J. mimosifolia in the area sampled. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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30. Surveys of soil and water reveal a goldmine of Phytophthora diversity in South African natural ecosystems.
- Author
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Eunsung Oh, Gryzenhout, Marieka, Wingfield, Brenda D., Wingfield, Michael J., and Burgess, Treena I.
- Subjects
PHYTOPHTHORA diseases ,FUNGAL diseases of plants ,OOMYCETES ,ECOSYSTEMS ,PHYLOGENY - Abstract
Phytophthora species are well-known as destructive plant pathogens, especially in natural ecosystems. It is ironic, therefore, how little is known regarding the Phytophthora diversity in South African natural woody ecosystems. In this study, Phytophthora species were isolated using standard baiting techniques from 182 soil and water samples and these were identified based on ITS and coxI sequence data. The 171 resulting Phytophthora isolates resided in 14 taxa including six known species (P. multivora, P. capensis, P. cryptogea, P. frigida, P. cinnamomi, P. cinnamomi var. parvispora), the known but as yet unnamed Phytophthora sp. PgChlamydo, P. sp. emzansi, and P. sp. Kununurra and five novel taxa referred to as P. sp. stellaris, P. sp. Umtamvuna P. sp. canthium, P. sp. xWS, P. sp. xHennops. Four of the new taxa were found exclusively in water and two of these are hybrids. The most commonly isolated species from soil was P. multivora, a species recently described from Western Australia. Phytophthora frigida was isolated for the first time from stream water. With the exception of P. cinnamomi, very little is known regarding the biology, epidemiology or origin of Phytophthora in South Africa. [ABSTRACT FROM AUTHOR]
- Published
- 2013
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31. Fungal Genomics Challenges the Dogma of Name-Based Biosecurity.
- Author
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McTaggart, Alistair R., van der Nest, Magriet A., Steenkamp, Emma T., Roux, Jolanda, Slippers, Bernard, Shuey, Louise S., Wingfield, Michael J., and Drenth, André
- Subjects
BIOSECURITY ,QUARANTINE ,FUNGI classification ,TAXONOMY ,FUNGI diversity - Abstract
The author discusses biosecurity and quarantine of specific pathogens such as fungal-like organisms and fungi. The author mentions several reasons on the long overdue of biosecurity of such organisms including the discovery of species' rate which outpaces taxonomy, the disagreement over the use of taxonomic names and definition of species, and its characteristics which do not account for genetic diversity in fungal populations.
- Published
- 2016
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32. New species of Mycosphaerella from Myrtaceae in plantations and native forests in eastern Australia.
- Author
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Carnegie, Angus J., Burgess, Treena I., Beilharz, Vyrna, and Wingfield, Michael J.
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MYCOSPHAERELLA ,MYRTACEAE ,PLANTATIONS ,FORESTS & forestry ,EUCALYPTUS ,TAXONOMY - Abstract
The majority of Mycosphaerella species from eucalypts (Eucalyptus, Corymbia and Angophora) in Australia have been recorded only from trees growing in plantations. This illustrates a bias in research in the past two decades toward commercial enterprise, and it emphasises a lack of understanding of the occurrence of these important fungi under natural conditions. Smweys of foliar fungi in native forests in eastern Australia, as well as adjacent plantations, thus have been initiated in recent years. In this study we describe four new species of Mycosphaerella from Eucalyptus spp. as well as other Myrtaceae. Mycosphaerella tumulosa sp. nov. (anamorph: Pseudocercospora sp.) was found on more than seven species of Eucalyptus and Corymbia in native forests and plantations in northeastern New South Wales and southeastern Queensland and appears to be relatively common, although not damaging to these trees. Mycosphaerella multiseptata sp. nov. was recorded from several locations on species of Angophora in native forests and amenity plantings. Mycosphaerella pseudovespa sp. nov. was found in one location in native forest on E. biturbinata. The first species of Mycosphaerella to be described from Syncarpia, M. syncarpiae sp. nov., was found in native forests in numerous locations from Sydney through to northeastern New South Wales and appears to be relatively common. [ABSTRACT FROM AUTHOR]
- Published
- 2007
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33. (117-119) Proposals to make the pre-publication deposit of key nomenclatural information in a recognized repository a requirement for valid publication of organisms treated as fungi under the Code.
- Author
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Hawksworth, David L., Cooper, Jerry A., Crous, Pedro W., Hyde, Kevin D., Iturriaga, Teresa, Kirk, Paul M., Lumbsch, H. Thorsten, May, Tom W., Minter, David W., Misra, Jitendra K., Norvell, Lorelei, Redhead, Scott A., Rossman, Amy Y., Seifert, Keith A., Stalpers, Joost A., Taylor, John W., and Wingfield, Michael J.
- Subjects
TAXONOMY ,FUNGI classification ,MYCOLOGISTS ,INSTITUTIONAL repositories ,MYCOLOGY ,COMPUTER network resources - Abstract
The article discusses the proposals to require pre-publications of nomenclatural information in a renowned repository to validate publications of proposed fungi names under the Code. It states that if approved, the proposal will benefit mycologists and public as it will allow free and complete access of nomenclatural information through online repositories such as MycoBank. It adds that the proposals limits and prevent depositions of nomenclatural information other than its own author.
- Published
- 2010
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34. Caliciopsis moriondi, a new species for a fungus long confused with the pine pathogen C. pinea
- Author
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Migliorini, Duccio, Luchi, Nicola, Pepori, Alessia Lucia, Pecori, Francesco, Aglietti, Chiara, Maccioni, Fabio, Munck, Isabel, Wyka, Stephen, Broders, Kirk, Wingfield, Michael J., and Santini, Alberto
- Subjects
0106 biological sciences ,0301 basic medicine ,Caliciopsis spp ,forest pathogen ,Fungus ,010603 evolutionary biology ,01 natural sciences ,03 medical and health sciences ,taxonomy ,Ascomycota ,lcsh:Botany ,Botany ,pine trees ,medicine ,Caliciopsis ,one new species ,Ecology, Evolution, Behavior and Systematics ,Canker ,Caliciopsis canker, Caliciopsis spp., forest pathogen, one new species, pine trees, taxonomy ,biology ,Phylogenetic tree ,Pinus radiata ,Fungi ,Outbreak ,Caliciopsis canker ,030108 mycology & parasitology ,medicine.disease ,biology.organism_classification ,lcsh:QK1-989 ,Ascocarp ,Eurotiomycetes ,Coryneliales ,Coryneliaceae ,Taxonomy (biology) ,Caliciopsis canker Caliciopsis spp. forest pathogen one new species pine trees taxonomy ,Research Article - Abstract
The genus Caliciopsis (Eurotiomycetes, Coryneliales) includes saprobic and plant pathogenic species. Caliciopsis canker is caused by Caliciopsis pinea Peck, a species first reported in the 19th century in North America. In recent years, increasing numbers of outbreaks of Caliciopsis canker have been reported on different Pinus spp. in the eastern USA. In Europe, the disease has only occasionally been reported causing cankers, mostly on Pinus radiata in stressed plantations. The aim of this study was to clarify the taxonomy of Caliciopsis specimens collected from infected Pinus spp. in Europe and North America using an integrative approach, combining morphology and phylogenetic analyses of three loci. The pathogenicity of the fungus was also considered. Two distinct groups were evident, based on morphology and multilocus phylogenetic analyses. These represent the known pathogen Caliciopsis pinea that occurs in North America and a morphologically similar, but phylogenetically distinct, species described here as Caliciopsis moriondisp. nov., found in Europe and at least one location in eastern North America. Caliciopsis moriondi differs from C. pinea in various morphological features including the length of the ascomata, as well as their distribution on the stromata.
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35. Botryosphaeriaceae species overlap on four unrelated, native South African hosts.
- Author
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Jami, Fahimeh, Slippers, Bernard, Wingfield, Michael J., and Gryzenhout, Marieka
- Subjects
- *
BOTRYOSPHAERIACEAE , *PATHOGENIC fungi , *WOODY plants , *CANNABACEAE , *PLEOSPORALES , *AGRICULTURE - Abstract
Abstract: Botryosphaeriaceae represents an important and diverse family of latent fungal pathogens of woody plants. We address the question of host range of these fungi by sampling leaves and branches of four native South African trees, including Acacia karroo (Fabaceae), Celtis africana (Cannabaceae), Searsia lancea (Anacardiaceae), and Gymnosporia buxifolia (Celastraceae). Two new species of the Botryosphaeriaceae, namely Tiarosporella africana sp. nov. and Aplosporella javeedii sp. nov. were identified, together with five known species, including Neofusicoccum parvum, Neofusicoccum kwambonambiense, Spencermartinsia viticola, Diplodia pseudoseriata, and Botryosphaeria dothidea. Most Botryosphaeriaceae occurred on more than one host. With the exception of S. lancea, which was infected by A. javeedii all the hosts were infected by more than one Botryosphaeriaceae species. Collectively, the results suggest that some intrinsic host factors, possibly combined with local environmental conditions, affect the distribution and co-infectivity of various hosts by the Botryosphaeriaceae. This would counteract the general ability of a species in the Botryosphaeriaceae to infect a broad range of plants. The combination of host and environmental factors might also explain why some Botryosphaeriaceae with apparently broad host ranges, are found on different suites of hosts in different areas of the world. [Copyright &y& Elsevier]
- Published
- 2014
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36. Botryosphaeriaceae associated with Acacia heterophylla (La Réunion) and Acacia koa (Hawaii).
- Author
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Jami, Fahimeh, Marincowitz, Seonju, Slippers, Bernard, Crous, Pedro W., Le Roux, Johannes J., Richardson, David M., and Wingfield, Michael J.
- Subjects
- *
BOTRYOSPHAERIACEAE , *ACACIA , *WOODY plants , *NUCLEOTIDE sequence , *TUBULINS , *SPECIES - Abstract
Acacia koa and A. heterophylla are commonly occurring native trees on the Hawaiian Islands and La Réunion, respectively. A recent phylogenetic study suggested that A. heterophylla renders A. koa paraphyletic, and that the former likely arose from the Hawaiian Islands around 1.4 million years ago. An intriguing question is whether their microbiota is similar, although they occur naturally in two very distant geographical locations. In this study, we compared the fungi in the Botryosphaeriaceae isolated from natural populations of A. koa and A. heterophylla. These fungi were chosen because they commonly occur on woody plants and some are important pathogens. They are also known to have been moved globally on asymptomatic plant materials. Isolates were identified based on comparisons of DNA sequence data for the rDNA-ITS, TEF1-α and β-tubulin loci. Ten Botryosphaeriaceae species were identified, of which four species were specific to A. koa from the Hawaiian Islands and five to A. heterophylla in La Réunion. Only one species, Neofusicoccum parvum , which is known to have a wide global distribution, was common to both hosts. The overall results of this study suggest that although A. koa and A. heterophylla share a recent evolutionary history, they have established independent microbiota, at least in terms of the Botryosphaeriaceae. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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37. Phylogenetic species recognition and hybridisation in Lasiodiplodia: A case study on species from baobabs.
- Author
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Cruywagen, Elsie M., Slippers, Bernard, Roux, Jolanda, and Wingfield, Michael J.
- Subjects
- *
FUNGAL phylogeny , *ADANSONIA digitata , *BOTRYOSPHAERIACEAE , *SPECIES hybridization , *BIOMARKERS - Abstract
Lasiodiplodia species ( Botryosphaeriaceae , Ascomycota ) infect a wide range of typically woody plants on which they are associated with many different disease symptoms. In this study, we determined the identity of Lasiodiplodia isolates obtained from baobab ( Adansonia species) trees in Africa and reviewed the molecular markers used to describe Lasiodiplodia species. Publicly available and newly produced sequence data for some of the type strains of Lasiodiplodia species showed incongruence amongst phylogenies of five nuclear loci. We conclude that several of the previously described Lasiodiplodia species are hybrids of other species. Isolates from baobab trees in Africa included nine species of Lasiodiplodia and two hybrid species. Inoculation trials with the most common Lasiodiplodia species collected from these trees produced significant lesions on young baobab trees. There was also variation in aggressiveness amongst isolates from the same species. The apparently widespread tendency of Lasiodiplodia species to hybridise demands that phylogenies from multiple loci (more than two and preferably four or more) are compared for congruence prior to new species being described. This will avoid hybrids being incorrectly described as new taxa, as has clearly occurred in the past. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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38. High gene flow and outcrossing within populations of two cryptic fungal pathogens on a native and non-native host in Cameroon
- Author
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Begoude Boyogueno, Aime Didier, Slippers, Bernard, Perez, Guillermo, Wingfield, Michael J., and Roux, Jolanda
- Subjects
- *
PATHOGENIC fungi , *GENE flow , *HOSTS (Biology) , *ALLELES , *BIOLOGICAL evolution , *FUNGAL populations - Abstract
Abstract: In this study, we determined the genetic diversity of 126 isolates representing both Lasiodiplodia theobromae and Lasiodiplodia pseudotheobromae, collected from Theobroma cacao and Terminalia spp. in Cameroon, using simple sequence repeat (SSR) markers. SSR alleles showed clear genetic distinction between L. theobromae and L. pseudotheobromae, supporting their earlier separation as sister species. Both L. theobromae and L. pseudotheobromae populations from Cameroon had high levels of gene diversity, moderate degrees of genotypic diversity, and high levels of gene flow between isolates from T. cacao and Terminalia spp. There was no evidence for geographic substructure in these populations across the region studied, and the SSR alleles were randomly associated in both species, suggesting outcrossing. The significant levels of aggressiveness, evolutionary potential represented by high levels of diversity, outcrossing and gene flow between geographically and host defined populations, identify these fungi as high-risk pathogens for their native and non-native hosts in Cameroon. [Copyright &y& Elsevier]
- Published
- 2012
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39. Two new Phytophthora species from South African Eucalyptus plantations
- Author
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Maseko, Bongani, Burgess, Treena I., Coutinho, Teresa A., and Wingfield, Michael J.
- Subjects
- *
ROOT rots , *ROOT diseases , *PHYTOPHTHORA , *PYTHIACEAE , *TUBULINS , *MICROTUBULES - Abstract
Abstract: A recent study to determine the cause of collar and root rot disease outbreaks of cold tolerant Eucalyptus species in South Africa resulted in the isolation of two putative new Phytophthora species. Based on phylogenetic comparisons using the ITS and β-tubulin gene regions, these species were shown to be distinct from known species. These differences were also supported by robust morphological characteristics. The names, Phytophthora frigida sp. nov. and Phytophthora alticola sp. nov. are thus provided for these taxa, which are phylogenetically closely related to species within the ITS clade 2 (P. citricola, P. tropicali and P.multivesiculata) and 4 (P. arecae and P. megakarya), respectively. Phytophthora frigida is heterothallic, and produces stellate to rosaceous growth patterns on growth medium, corraloid hyphae, sporangia with a variety of distorted shapes and has the ability to grow at low temperatures. Phytophthora alticola is homothallic and has a slower growth rate in culture. Both P. frigida and P. alticola are pathogenic to Eucalyptus dunnii. In pathogenicity tests, they were, however, less pathogenic than P. cinnamomi, which is a well-known pathogen of Eucalyptus in South Africa. [Copyright &y& Elsevier]
- Published
- 2007
- Full Text
- View/download PDF
40. Phylogenetic reassessment supports accommodation of Phaeophleospora and Colletogloeopsis from eucalypts in Kirramyces
- Author
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Andjic, Vera, Barber, Paul A., Carnegie, Angus J., Hardy, Giles St J., Wingfield, Michael J., and Burgess, Treena I.
- Subjects
- *
MYCOSPHAERELLA , *EUCALYPTUS , *PATHOGENIC microorganisms , *NUCLEIC acids , *DEOXYRIBOSE , *BIOLOGICAL specimens - Abstract
Abstract: Species of Phaeophleospora are anamorphs of Mycosphaerella and they include some of the most serious foliar pathogens of Eucalyptus spp. grown in plantations worldwide. Pathogens assigned to this genus and occurring on Eucalyptus spp. were previously treated in Kirramyces and they are also phylogenetically closely related to other anamorphs of Mycosphaerella residing in the genus Colletogloeopsis. The primary aim of this study was to consider the appropriate taxonomic placement of these species. To achieve this goal, morphological characteristics and DNA sequence data from the ITS and translation EF1-α gene regions were used to compare the type species P. eugeniae, Phaeophleospora spp. and Colletogloeopsis spp. occurring on eucalypts, using ex-type cultures and herbarium specimens. Phylogenetic data and morphological comparisons supported the separation of P. eugeniae from Phaeophleospora species occurring on eucalypts. The name Phaeophleospora is retained for P. eugeniae and the name Kirramyces is resurrected for the species occurring on eucalypts (genera Eucalyptus, Corymbia, and Angophora). Sequence data from the type specimens of two previously described species of Kirramyces, K. lilianiae and K. delegatensis, show they reside in a clade with other Kirramyces spp. Morphological and DNA sequence comparisons also showed that there is considerable overlap between species of Phaeophleospora and Colletogloeopsis from eucalypts. Based on these findings, Colletogloeopsis is reduced to synonymy with the older Kirramyces and the description of Kirramyces is emended to include species with aseptate, as well as multiseptate, conidia produced in acervuli or pycnidia. Two new species of Kirramyces, K. angophorae and K. corymbiae, are also described. [Copyright &y& Elsevier]
- Published
- 2007
- Full Text
- View/download PDF
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