1. Exploring the microbiome of healthy and diseased peri-implant sites using Illumina sequencing.
- Author
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Sanz‐Martin, Ignacio, Doolittle‐Hall, Janet, Teles, Ricardo P., Patel, Michele, Belibasakis, Georgios N., Hämmerle, Christoph H. F., Jung, Ronald E., and Teles, Flavia R. F.
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HUMAN microbiota , *PERI-implantitis , *RNA sequencing , *RIBOSOMAL RNA genetics , *BIOFILMS , *SPIROCHETES , *DENTAL implant complications , *BACTEROIDETES , *DNA , *DENTAL implants , *RNA , *T-test (Statistics) , *MANN Whitney U Test - Abstract
Aim To compare the microbiome of healthy (H) and diseased (P) peri-implant sites and determine the core peri-implant microbiome. Materials and Methods Submucosal biofilms from 32 H and 35 P sites were analysed using 16S rRNA sequencing (MiSeq, Illumina), QIIME and HOMI NGS. Differences between groups were determined using principal coordinate analysis ( PCoA), t tests and Wilcoxon rank sum test and FDR-adjusted. The peri-implant core microbiome was determined. Results PCoA showed partitioning between H and P at all taxonomic levels. Bacteroidetes, Spirochetes and Synergistetes were higher in P, while Actinobacteria prevailed in H ( p < .05). Porphyromonas and Treponema were more abundant in P while Rothia and Neisseria were higher in H ( p < .05). The core peri-implant microbiome contained Fusobacterium, Parvimonas and Campylobacter sp. T. denticola, and P. gingivalis levels were higher in P, as well as F. alocis, F. fastidiosum and T. maltophilum ( p < .05). Conclusion The peri-implantitis microbiome is commensal-depleted and pathogen-enriched, harbouring traditional and new pathogens. The core peri-implant microbiome harbours taxa from genera often associated with periodontal inflammation. [ABSTRACT FROM AUTHOR]
- Published
- 2017
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