1. Arachidicoccus terrestris sp. nov., isolated from greenhouse soil.
- Author
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Won M, Weon HY, Hong SB, Han BH, and Kwon SW
- Subjects
- Bacterial Typing Techniques, Bacteroidetes, Base Composition, DNA, Bacterial genetics, Fatty Acids chemistry, Phylogeny, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Soil, Soil Microbiology
- Abstract
A Gram-stain-negative, aerobic, non-motile, rod-shaped or occasionally filamentous-shaped bacterial strain, designated 5GH13-10
T , was isolated from greenhouse soil sampled in Yeoju-si, Republic of Korea. Colonies were milky-coloured, round and convex, and catalase- and oxidase-positive. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain 5GH13-10T was related to the genus Arachidicoccus and had highest 16S rRNA gene sequence identity with Arachidicoccus rhizosphaerae Vu-144T (98.4 %). The major cellular fatty acids were iso-C15 : 0 , iso-C15 : 1 G, iso-C17 : 0 3-OH and summed feature 3 (C16 : 1 ω 6 c and/or C16 : 1 ω 7 c ). The predominant quinone was menaquinone MK-7, and the polar lipids were composed of phosphatidylethanolamine, one unidentified aminolipid, three unidentified aminophospholipids, one unidentified phospholipid and five unidentified lipids. The genomic DNA G+C content of strain 5GH13-10T was 43.8 mol%. The average nucleotide identity values between strain 5GH13-10T and the closely related species Arachidicoccus ginsenosidivorans Gsoil 809T , Arachidicoccus rhizosphaerae Vu-144T and Archidicoccus soli KIS59-12T were 74.86, 74.74 and 69.52 %, and the digital DNA-DNA hybridization values were 20.0, 19.8 and 18.6 %, respectively. Combined phenotypic, phylogenetic and genomic data demonstrated that strain 5GH13-10T is representative of a novel species of the genus Arachidicoccus , for which we propose the name Arachidicoccus terrestris sp. nov. (type strain 5GH13-10T =KACC 18014T =NBRC 113162T ).- Published
- 2022
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