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Seagrass meadows are important carbon sinks in the global coastal carbon cycle yet are also among the most rapidly declining marine habitats. Their ability to sequester carbon depends on flow–sediment–vegetation interactions that facilitate net deposition, as well as high rates of primary production. However, the effects of seasonal and episodic variations in seagrass density on net sediment and carbon accumulation have not been well quantified. Understanding these dynamics provides insight into how carbon accumulation in seagrass meadows responds to disturbance events and climate change. Here, we apply a spatially resolved sediment transport model that includes coupling of seagrass effects on flow, waves, and sediment resuspension in a seagrass meadow to quantify seasonal rates of sediment and carbon accumulation in the meadow. Our results show that organic carbon accumulation rates were largely determined by sediment accumulation and that they both changed non‐linearly as a function of seagrass shoot density. While seagrass meadows effectively trapped sediment at meadow edges during spring–summer growth seasons, during winter senescence low‐density meadows (< 160 shoots m−2) were erosional with rates sensitive to density. Small variations in winter densities resulted in large changes in annual sediment and carbon accumulation in the meadow; meadow‐scale (hundreds of square meters) summer seagrass dieback due to marine heatwaves can result in annual erosion and carbon loss. Our findings highlight the strong temporal and spatial variability in sediment accumulation within seagrass meadows and the implications for annual sediment carbon burial rates and the resilience of seagrass carbon stocks under future climate change. [ABSTRACT FROM AUTHOR]

In shallow coastal bays where nutrient loading and riverine inputs are low, turbidity, and the consequent light environment are controlled by resuspension of bed sediments due to wind-waves and tidal currents. High sediment resuspension and low light environments can limit benthic primary productivity; however, both currents and waves are affected by the presence of benthic plants such as seagrass. This feedback between the presence of benthic primary producers such as seagrass and the consequent light environment has been predicted to induce bistable dynamics locally. However, these vegetated areas influence a larger area than they footprint, including a barren adjacent downstream area which exhibits reduced shear stresses. Here we explore through modeling how the patchy structure of seagrass meadows on a landscape may affect sediment resuspension and the consequent light environment due to the presence of this sheltered region. Heterogeneous vegetation covers comprising a mosaic of randomly distributed patches were generated to investigate the effect of patch modified hydrodynamics. Actual cover of vegetation on the landscape was used to facilitate comparisons across landscape realizations. Hourly wave and current shear stresses on the landscape along with suspended sediment concentration and light attenuation characteristics were then calculated and spatially averaged to examine how actual cover and mean water depth affect the bulk sediment and light environment. The results indicate that an effective cover, which incorporates the sheltering area, has important controls on the distributions of shear stress, suspended sediment, light environment, and consequent seagrass habitat suitability. Interestingly, an optimal habitat occurs within a depth range where, if actual cover is reduced past some threshold, the bulk light environment would no longer favor seagrass growth. [ABSTRACT FROM AUTHOR]

Dinitrogen (N2) fixation rates were determined in the phyllosphere and in sediments with and without the presence of eelgrass (Zostera marina) in San Quintín Bay, an upwelling-influenced coastal lagoon in the NE Pacific. Samples were collected during winter 2015 at 4 sites with a gradient of oceanic influence and contrasting impact from oyster aquaculture. N2 fixation rates were determined with the acetylene reduction assay. Treatments under light and in the dark, and with and without sodium molybdate resulted in similar fixation rates, suggesting that heterotrophic nonsulfate-reducing bacteria made the largest contribution to N2 fixation, while sulfate-reducing bacteria had low fixation activity at most stations. N2-fixation rates in sediments ranged from 7 to 12 µmol m-2 h-1 and were similar to those in other temperate seagrass-dominated estuaries. Winter conditions were likely responsible for small spatial differences in N2 fixation rates throughout the lagoon, even between vegetated and unvegetated sites and among depth sections of sediment cores. During winter, Z. marina growth rates and biomass are low, resulting in low and less variable release of labile organic carbon, which acts as substrate for diazotrophs. The lowest N2 fixation rates were measured at a site where high denitrification rates have been observed, probably reflecting a competition between diazotrophs and denitrifiers. The highest fixation rates were measured at the innermost station where oceanic nitrate is scarce. Epiphytic bacteria contributed ~7% of the total N2 fixation, with rates of <0.5 µmol m-2 h-1. N2 fixation potentially supplied 5-10% of Z. marina N requirements and could supply ~30% of the N loss via denitrification in winter. [ABSTRACT FROM AUTHOR]