1. Lysobacter antarcticus sp. nov., an SUF-system-containing bacterium from Antarctic coastal sediment.
- Author
-
Liu Z, Jiang P, Niu G, Wang W, and Li J
- Subjects
- Antarctic Regions, Bacterial Typing Techniques, Base Composition, DNA, Bacterial genetics, Fatty Acids chemistry, Nucleic Acid Hybridization, Phospholipids chemistry, RNA, Ribosomal, 16S genetics, Sequence Analysis, DNA, Ubiquinone chemistry, Geologic Sediments microbiology, Lysobacter classification, Lysobacter isolation & purification, Phylogeny, Seawater microbiology
- Abstract
A Gram-stain-negative, heterotrophic, aerobic, non-motile, rod-shaped bacterial strain (GW1-59
T ) belonging to the genus Lysobacter was isolated from coastal sediment collected from the Chinese Great Wall Station, Antarctica. The strain was identified using a polyphasic taxonomic approach. The strain grew well on Reasoner's 2A media and could grow in the presence of 0-4 % (w/v) NaCl (optimum, 1 %), at pH 9.0-11.0 and at 15-37 °C (optimum, 30 °C). Strain GW1-59T possessed ubiquinone-8 as the sole respiratory quinone. The major phospholipids were diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The major fatty acids were summed feature 9 (10-methyl C16 : 0 and/or iso-C17 : 1 ω 9 c ), iso-C15 : 0 , iso-C16 : 0 , iso-C17 : 0 , C16 : 0 and iso-C11 : 0 3-OH. DNA-DNA relatedness with Lysobacter concretionis Ko07T , the nearest phylogenetic relative (98.5 % 16S rRNA gene sequence similarity) was 23.4 % (21.1-25.9 %). The average nucleotide identity value between strain GW1-59T and L. concretionis Ko07T was 80.1 %. The physiological and biochemical results and low level of DNA-DNA relatedness suggested the phenotypic and genotypic differentiation of strain GW1-59T from other Lysobacter species. On the basis of phenotypic, phylogenetic and genotypic data, a novel species, Lysobacter antarcticus sp. nov., is proposed. The type strain is GW1-59T (=CCTCC AB 2019390T =KCTC 72831T ).- Published
- 2022
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