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Fully automated and volumetric segmentation of critical tumors may play a crucial role in diagnosis and surgical planning. One of the most challenging tumor segmentation tasks is localization of pancreatic ductal adenocarcinoma (PDAC). Exclusive application of conventional methods does not appear promising. Deep learning approaches has achieved great success in the computer aided diagnosis, especially in biomedical image segmentation. This paper introduces a framework based on convolutional neural network (CNN) for segmentation of PDAC mass and surrounding vessels in CT images by incorporating powerful classic features, as well. First, a 3D-CNN architecture is used to localize the pancreas region from the whole CT volume using 3D Local Binary Pattern (LBP) map of the original image. Segmentation of PDAC mass is subsequently performed using 2D attention U-Net and Texture Attention U-Net (TAU-Net). TAU-Net is introduced by fusion of dense Scale-Invariant Feature Transform (SIFT) and LBP descriptors into the attention U-Net. An ensemble model is then used to cumulate the advantages of both networks using a 3D-CNN. In addition, to reduce the effects of imbalanced data, a multi-objective loss function is proposed as a weighted combination of three classic losses including Generalized Dice Loss (GDL), Weighted Pixel-Wise Cross Entropy loss (WPCE) and boundary loss. Due to insufficient sample size for vessel segmentation, we used the above-mentioned pre-trained networks and fine-tuned them. Experimental results show that the proposed method improves the Dice score for PDAC mass segmentation in portal-venous phase by 7.52% compared to state-of-the-art methods in term of DSC. Besides, three dimensional visualization of the tumor and surrounding vessels can facilitate the evaluation of PDAC treatment response. [ABSTRACT FROM AUTHOR]

Background: Image fusion is the process of combining the information of several input images into one image. Projection images obtained from three-dimensional (3D) optical coherence tomography (OCT) can show inlier retinal pathology and abnormalities that are not visible in conventional fundus images. In recent years, the projection image is often made by an average on all retina that causes to lose many intraretinal details. Methods: In this study, we focus on the formation of optimum projection images from retinal layers using Curvelet-based image fusion. The latter consists of three main steps. In the earlier studies, macular spectral 3D data using diffusion map-based OCT were segmented into 12 different boundaries identifying 11 retinal layers in three dimensions. In the second step, projection images are attained using conducting some statistical methods on the space between each pair of boundaries. In the next step, retinal layers are merged using Curvelet transform to make the final projection images. Results: These images contain integrated retinal depth information as well as an ideal opportunity to better extract retinal features such as vessels and the macula region. Finally, qualitative and quantitative evaluations show the superiority of this method to the average-based and wavelet-based fusion methods. Overall, our method obtains the best results for image fusion in all terms such as entropy (6.7744) and AG (9.5491). Conclusion: Creating an image with more and detailed information made by the Curvelet-based image fusion has significantly higher contrast. There are also many thin veins in Curvelet-based fused image, which are absent in average-based and wavelet-based fused images. [ABSTRACT FROM AUTHOR]

Nowadays, it is obvious that there is a relationship between changes in the retinal vessel structure and diseases such as diabetic, hypertension, stroke, and the other cardiovascular diseases in adults as well as retinopathy of prematurity in infants. Retinal fundus images provide non-invasive visualization of the retinal vessel structure. Applying image processing techniques in the study of digital color fundus photographs and analyzing their vasculature is a reliable approach for early diagnosis of the aforementioned diseases. Reduction in the arteriolar-venular ratio of retina is one of the primary signs of hypertension, diabetic, and cardiovascular diseases which can be calculated by analyzing the fundus images. To achieve a precise measuring of this parameter and meaningful diagnostic results, accurate classification of arteries and veins is necessary. Classification of vessels in fundus images faces with some challenges that make it difficult. In this paper, a comprehensive study of the proposed methods for classification of arteries and veins in fundus images is presented. Considering that these methods are evaluated on different datasets and use different evaluation criteria, it is not possible to conduct a fair comparison of their performance. Therefore, we evaluate the classification methods from modeling perspective. This analysis reveals that most of the proposed approaches have focused on statistics, and geometric models in spatial domain and transform domain models have received less attention. This could suggest the possibility of using transform models, especially data adaptive ones, for modeling of the fundus images in future classification approaches. [ABSTRACT FROM AUTHOR]