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Your search keyword '"Malini Kotak"' showing total 2 results
Start Over Author "Malini Kotak" Topic reticulitermes
2 results on '"Malini Kotak"'

1. Draft Genome Sequences of Strains TAV3 and TAV4 ( Verrucomicrobia : Opitutaceae ), Isolated from a Wood-Feeding Termite, and In Silico Analysis of Their Polysaccharide-Degrading Enzymes

Author

Jorge L. M. Rodrigues, Jonathan Y. Lin, Jantiya Isanapong, and Malini Kotak

Subjects
chemistry.chemical_classification, Genetics, 0303 health sciences, biology, 030306 microbiology, In silico, Verrucomicrobia, Hindgut, Polysaccharide, biology.organism_classification, Genome, 03 medical and health sciences, Reticulitermes, Enzyme, Immunology and Microbiology (miscellaneous), chemistry, Opitutaceae, Molecular Biology, 030304 developmental biology
Abstract

Here, we report the high-quality draft genome sequences of Opitutaceae sp. strains TAV3 and TAV4, which were isolated from the hindgut of the wood-feeding termite Reticulitermes flavipes . Using a combination of Illumina and PacBio sequencing, we constructed nearly complete assemblies totaling 5.84 and 5.91 Mbp in length for strains TAV3 and TAV4, respectively. In addition, we report an in silico analysis of potential lignocellulose-digesting enzymes present in these strains.

Published
2020

2. Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes

Author

Amy Chen, Malini Kotak, Tanja Woyke, David Bruce, Jantiya Isanapong, Amrita Pati, Matt Nolan, Lynne Goodwin, Natalia Ivanova, Jorge L. M. Rodrigues, Miriam Land, Marcel Huntemann, and Cliff Han

Subjects
Whole genome sequencing, Genetics, Facultative, biology, Human Genome, Hindgut, biology.organism_classification, Microbiology, Reticulitermes, Plasmid, Methylotroph, Biochemistry and Cell Biology, Prokaryotes, Sulfate assimilation, Molecular Biology, Gene
Abstract

The Opitutaceae bacterium strain TAV5, a member of the phylum Verrucomicrobia , was isolated from the wood-feeding termite hindgut. We report here its complete genome sequence, which contains a chromosome and a plasmid of 7,317,842 bp and 99,831 bp, respectively. The genomic analysis reveals genes for methylotrophy, lignocellulose degradation, and ammonia and sulfate assimilation.

Published
2015

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