1. Studies of the structure of glutamate receptor ion channels and the mechanisms of their blockade by organic cations.
- Author
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Magazanik LG, Tikhonov DB, Bol'shakov KV, Gmiro VE, Buldakova SL, and Samoilova MV
- Subjects
- Adamantane pharmacology, Amantadine analogs & derivatives, Amantadine pharmacology, Animals, Animals, Newborn, Brain metabolism, Cations pharmacology, Dose-Response Relationship, Drug, Drug Interactions, In Vitro Techniques, Ion Channels classification, Models, Biological, Models, Molecular, Neurons drug effects, Neurons physiology, Patch-Clamp Techniques, Quaternary Ammonium Compounds pharmacology, Rats, Rats, Wistar, Receptors, AMPA chemistry, Receptors, AMPA physiology, Receptors, N-Methyl-D-Aspartate chemistry, Receptors, N-Methyl-D-Aspartate physiology, Adamantane analogs & derivatives, Brain drug effects, Excitatory Amino Acid Antagonists pharmacology, Ion Channels antagonists & inhibitors, Receptors, AMPA antagonists & inhibitors, Receptors, N-Methyl-D-Aspartate antagonists & inhibitors
- Abstract
The structural determinants for blockade of the AMPA and NMDA subtypes of glutamate receptors were studied by analysis of structural-functional relationships in a series of mono- and dicationic compounds. The results showed that the hydrophobic and nucleophilic components of the blocker binding sites are located close to each other in the channel of the NMDA receptor, while they are spatially distant in the channel of the AMPA receptor. Molecular mechanical methods were used to construct models of these channels satisfying these topographic criteria and providing adequate descriptions of the binding of the channel blockers. According to the models, binding of blockers to the NMDA channel occurs in the selective filter of the channel (the N/Q/R site). The nucleophilic region of the AMPA channel is formed by the oxygen atoms of glycine residues in position +2 relative to the selective filter. Identification of the major relationships between the molecular structure of the ion channels of these glutamate receptor subtypes and their blockade by organic cations allows the further synthesis of AMPA and NMDA channel blockers with specified levels of activity and selectivity to be directed.
- Published
- 2003
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