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Building trust in science and evidence-based decision-making depends heavily on the credibility of studies and their findings. Researchers employ many different study designs that vary in their risk of bias to evaluate the true effect of interventions or impacts. Here, we empirically quantify, on a large scale, the prevalence of different study designs and the magnitude of bias in their estimates. Randomised designs and controlled observational designs with pre-intervention sampling were used by just 23% of intervention studies in biodiversity conservation, and 36% of intervention studies in social science. We demonstrate, through pairwise within-study comparisons across 49 environmental datasets, that these types of designs usually give less biased estimates than simpler observational designs. We propose a model-based approach to combine study estimates that may suffer from different levels of study design bias, discuss the implications for evidence synthesis, and how to facilitate the use of more credible study designs., Randomised controlled experiments are the gold standard for scientific inference, but environmental and social scientists often rely on different study designs. Here the authors analyse the use of six common study designs in the fields of biodiversity conservation and social intervention, and quantify the biases in their estimates.

Urbanization poses a serious threat to local biodiversity, yet towns and cities with abundant natural features may harbor important species populations and communities. While the contribution of urban greenspaces to conservation has been demonstrated by numerous studies within temperate regions, few consider the bird communities associated with different landcovers in Neotropical cities. To begin to fill this knowledge gap, we examined how the avifauna of a wetland city in northern Amazonia (Georgetown, Guyana) varied across six urban landcover types (coastal bluespace; urban bluespace; managed greenspace; unmanaged greenspace; dense urban; sparse urban). We measured detections, species richness and a series of ground cover variables that characterized the heterogeneity of each landcover, at 114 locations across the city. We recorded >10% (98) of Guyana’s bird species in Georgetown, including taxa of conservation interest. Avian detections, richness, and community composition differed with landcover type. Indicator species analysis identified 29 species from across dietary guilds, which could be driving community composition. Comparing landcovers, species richness was highest in managed greenspaces and lowest in dense urban areas. The canal network had comparable levels of species richness to greenspaces. The waterways are likely to play a key role in enhancing habitat connectivity as they traverse densely urbanized areas. Both species and landcover information should be integrated into urban land-use planning in the rapidly urbanizing Neotropics to maximize the conservation value of cities. This is imperative in the tropics, where anthropogenic pressures on species are growing significantly, and action needs to be taken to prevent biodiversity collapse.

Intact forests provide diverse and irreplaceable ecosystem services that are critical to human well-being, such as carbon storage to mitigate climate change. However, the ecosystem functions that underpin these services are highly dependent on the woody vegetation-animal interactions occurring within forests. While vertebrate defaunation is of growing policy concern, the effects of vertebrate loss on natural forest regeneration have yet to be quantified globally. Here we conduct a meta-analysis to assess the direction and magnitude of defaunation impacts on forests. We demonstrate that real-world defaunation caused by hunting and habitat fragmentation leads to reduced forest regeneration, although manipulation experiments provide contrasting findings. The extirpation of primates and birds cause the greatest declines in forest regeneration, emphasising their key role in maintaining carbon stores, and the need for national and international climate change and conservation strategies to protect forests from defaunation fronts as well as deforestation fronts., The defaunation of vertebrates may disrupt forest functioning through the loss of plant-animal interactions, but impacts on forests remain unquantified. Here the authors show that seed dispersal is a key interaction and defaunation of primates and birds negatively impacts forest regeneration.

Seedling growth and survival are critical for tropical rainforest regeneration. Alterations to natural disturbance regimes, such as those brought about by logging, have the potential to shift relative species abundances and the community composition of forests, resulting in population declines for commercially valuable species. Timber operations therefore need to minimise such changes if long-term sustainability is to be achieved within the industry. Reduced-impact logging (RIL) has been promoted widely as an alternative management strategy to conventional selective logging, as it employs practices that decrease the negative impacts of logging within forests. However, the long-term sustainability of RIL, including the influence it has on the regeneration of species targeted for timber extraction, is still uncertain. Here we undertake a comparative study in Iwokrama forest, Guyana, examining seedling densities of four commercially valuable and two pioneer tree species in unlogged, 1.5 years and 4.5 years postharvest forest plots to ascertain how seedling regeneration is effected by RIL. We find that RIL had either a neutral or positive impact on the density of seedlings of timber species when compared to unlogged forest, with pioneer species densities remaining rare. We conclude that the forestry practices associated with RIL have little effect on the natural regeneration rates of key commercially valuable tree species in logged neotropical forests.

Species of bats in the subfamilies Stenodermatinae and Carolliinae are primarily frugivores, and through the ingestion of fruit and\ud defecation of seeds, they play a crucial role in their environment through the dispersal of early successional and pioneer plants contributing to reforestation. These ecosystem services provided by frugivorous bats are becoming more critical with time, as anthropogenic habitat destruction continues to rise. The objective of this study was to survey the plant species dispersed by frugivorous bats in a tropical rainforest in Guyana. Fecal samples were taken from captured frugivorous bats and stomach contents were taken from a representative collection. The four most common bats were Artibeus planirostris, A. obscurus, A. lituratus, and Carollia perspicillata, which accounted for 67% of total captures in mist nets set in the forest understory. Twenty plant species were identified in fecal and stomach content samples with the most abundant (Ficus nymphaeifolia, Piper bartlingianum, Cecropia latiloba, and C. sciadophylla) accounting for 60% of the total. Cecropia latiloba, which is an early colonizer of floodplains throughout the Guiana Shield and Amazon River Basin was previously unknown to be bat dispersed. Seven plant species were documented as being dispersed by nine bat species for the first time. These results enhance our understanding of seed dispersal by Neotropical bats, specifically by revealing previously unknown bat/plant relationships.

Most countries have committed to protect 17% of their terrestrial area by 2020 through Aichi Target 11 of the Convention on Biological Diversity, with a focus on protecting areas of particular importance for biodiversity. This means national-scale spatial conservation prioritisations are needed to help meet this target and guide broader conservation and land-use policy development. However, to ensure these assessments are adopted by policy makers, they must also consider national priorities. This situation is exemplified by Guyana, a corner of Amazonia that couples high biodiversity with low economic development. In recent years activities that threaten biodiversity conservation have increased, and consequently, protected areas are evermore critical to achieving the Aichi targets. Here we undertake a cost-effective approach to protected area planning in Guyana that accounts for in-country conditions. To do this we conducted a stakeholder-led spatial conservation prioritisation based on meeting targets for 17 vegetation types and 329 vertebrate species, while minimising opportunity costs for forestry, mining, agriculture and urbanisation. Our analysis identifies 3 million ha of priority areas for conservation, helping inform government plans to double the current protected area network from 8.5 to 17%. As part of this, we also develop a new technique to prioritise engagement with local communities whose lands are identified as important to conservation. Our study both provides a scientifically robust, politically acceptable protected area expansion strategy for Guyana, and illustrates the importance of conservation planning at the country-scale to translate international commitments into national action.

Dung beetles (Scarabaeidae: Scarabaeinae) are sensitive to habitat perturbations and are easily studied, making them an ideal taxonomic group with which to evaluate the effects of low-intensity anthropogenic disturbances such as Reduced-Impact Logging. Here we examine the effect of a certified Reduced-Impact Logging operation on dung beetles, and demonstrate their suitability for use in rapid ecological impact studies. We sampled dung beetle assemblages, environmental variables and timber extraction rates across four treatment groups in closed canopy and canopy gaps in logged and unlogged forest in Guyana. Community analysis revealed that logged forest supported a more uniform dung beetle assemblage compared to unlogged forest. Differences in assemblage structure were driven by dissimilarity between closed canopy treatments, as plots in artificial and natural canopy gaps supported comparable assemblages. Indicator analyses were conducted across treatments, using a new approach (CLAM) and two well-established methods (IndVal, SIMPER). Two species respectively were classified as indicators of logged (Hansreia affinis and Eurysternus caribaeus) and unlogged forest (Canthidium aff. centrale and Deltochilum (Calhyboma) carinatum). BIO-ENV analysis demonstrated that tree extraction intensity, bare ground cover, and ground cover by leaf material were key factors influencing dung beetle assemblages. Despite the relatively low-impact of Reduced-Impact Logging reported by previous studies, we find that dung beetles are sensitive to even small changes in environmental conditions as a result of this form of anthropogenic disturbance. As dung beetles are a highly responsive taxonomic group, we illustrate that they represent a valuable taxon that can be used to critically evaluate best practice forestry operations and other disturbance activities, particularly in time constrained studies (e.g., rapid monitoring and environmental impact assessments). However, we recommend the use of multiple indicator analyses to monitor potential changes in assemblage composition, due to a lack of congruence between methods.

Vertebrate population densities were quantified in lowland central Guyana using line-transect censuses at three forest sites subjected to reduced-impact logging (RIL), and three adjacent unlogged sites. We censused a range of forest vertebrate species including large canopy-dwelling and terrestrial birds, three primates, one rodent and one tortoise. Two 4 km transects at each site were repeatedly surveyed during the wet season of 2008 to derive population density estimates on the basis of a cumulative survey effort of 416 km. RIL had ended within 16 months, and sites had been subjected to a mean extraction rate of 3.9 m3 ha−1, equivalent to only 1.1 trees ha−1. Three of the 15 vertebrate species examined here exhibited significantly different abundances at forest RIL sites, two of which were negative. Large frugivores such as primates were less abundant in sites subject to RIL, whereas smaller frugivores, granivores, folivores and insectivores were more common in logged sites. We are unable to reliably distinguish between responses of different taxonomic groups, since robust abundance metrics could only be estimated for four mammal species. Despite this, species traits including dietary guild, body mass, home range size and vertical stratification of forest use are used to explain varying responses. Our findings suggest that responsible reduced-impact logging practices in neotropical forests can be considered as a relatively benign form of forest management that can coexist with the requirements of both local economies and biodiversity conservation. However, our study sites experienced comparably low extraction rates, and detrimental effects such as hunting were low. Our results therefore provide an opportunity to scrutinise the effects of best practice logging systems, though do not necessarily represent typical circumstances across tropical forests.

Summary Tropical forests are selectively logged at 20 times the rate at which they are cleared, and at least a fifth have already been disturbed in this way [1]. In a recent pan-tropical assessment, Burivalova et al. [2] demonstrate the importance of logging intensity as a driver of biodiversity decline in timber estates. Their analyses reveal that species richness of some taxa could decline by 50% at harvest intensities of 38 m 3 ha -1 . However, they did not consider the extraction techniques that lead to these intensities. Here, we conduct a complementary meta-analysis of assemblage responses to differing logging practices: conventional logging and reduced-impact logging. We show that biodiversity impacts are markedly less severe in forests that utilise reduced-impact logging, compared to those using conventional methods. While supporting the initial findings of Burivalova et al. [2], we go on to demonstrate that best practice forestry techniques curtail the effects of timber extraction regardless of intensity. Therefore, harvest intensities are not always indicative of actual disturbance levels resulting from logging. Accordingly, forest managers and conservationists should advocate practices that offer reduced collateral damage through best practice extraction methods, such as those used in reduced-impact logging. Large-scale implementation of this approach would lead to improved conservation values in the 4 million km 2 of tropical forests that are earmarked for timber extraction [3].

Conservation management can no longer rely on protecting pristine habitats, but must consider the\ud wider landscape. This is especially true on oceanic islands where endemic species are believed to be\ud particularly susceptible to the extinction risks that accompany land conversion. Despite this, there is a\ud paucity of studies examining how endemic communities on oceanic islands may be distributed across\ud such human-modified habitats. Taking Príncipe Island in West Africa as a case study, we investigate how\ud avian communities vary across the habitats (primary forest, secondary forest, agricultural areas) of this\ud globally important centre of endemism. Here, recent policy reforms aimed at poverty alleviation and\ud increased food production are rapidly altering the current land-use mosaic. Across all habitats, 27 bird\ud species were encountered. Survey points in secondary forest and agricultural areas were, on average,\ud more diverse and held higher overall abundances of birds than those within primary forest. This was\ud true for both the entire avian assemblage and the endemic species alone. Nevertheless, two IUCN-listed\ud species were restricted to primary forest, and many other endemics occurred at higher densities within\ud this habitat. We demonstrate that agricultural areas and novel habitats, such as secondary forest, can\ud hold high abundances of endemic species and thus have the potential to act as a resource for biodiversity\ud conservation. A double-stranded approach to conservation is therefore required that both protects the\ud integrity of the primary forest and controls the rapid changes in agricultural land-use to ensure that it\ud continues to support a large component of the endemic avifauna.

Fishes were collected from the rivers in and around the Iwokrama Forest during January–February and November–December 1997. Four hundred species of fish were recorded from forty families in ten orders. Many of these fishes are newly recorded from Guyana and several are thought to be endemic. The number of species recorded for the area is surprising given the low level of effort and suggests that this area may be particularly important from a fish diversity perspective. This paper focuses on species of particular interest from a management perspective including those considered economically important, rare or endangered. The paper is also the basis for developing fisheries management systems in the Iwokrama Forest and Rupununi Wetlands.