12 results on '"Kido, N."'
Search Results
2. Synthesis of Escherichia coli O9a polysaccharide requires the participation of two domains of WbdA, a mannosyltransferase encoded within the wb* gene cluster.
- Author
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Kido N, Sugiyama T, Yokochi T, Kobayashi H, and Okawa Y
- Subjects
- Conserved Sequence genetics, DNA, Recombinant genetics, Genes, Bacterial genetics, Genetic Complementation Test, Lipopolysaccharides chemistry, Mannose metabolism, Mutagenesis, Insertional genetics, Plasmids genetics, Polysaccharides, Bacterial chemistry, Protein Structure, Secondary, Restriction Mapping, Sequence Homology, Nucleic Acid, Escherichia coli metabolism, Mannosyltransferases metabolism, O Antigens immunology, Polysaccharides, Bacterial biosynthesis
- Abstract
WbdA (previously MtfA) is one of the mannosyltransferases encoded within the Escherichia coli O9a wb* gene cluster. It is composed of two domains of similar size, connected by an alpha-helix chain. Elimination of the C-terminal half by transposon insertion or gene deletion caused synthesis of an altered structural O-polysaccharide consisting only of alpha-1,2-linked mannose. O9a polysaccharide synthesis was restored by the C-terminal half of WbdA in trans. No membrane incorporation of mannose from GDP mannose was observed in a strain carrying only the gene for truncated WbdA. For mannose incorporation, it was necessary to introduce both wbdB and wbdC genes into the strain. Therefore, it is likely that the N-terminal half of truncated WbdA synthesizes the altered O-polysaccharide together with other mannosyltransferases which participate in the initial reactions of the O9a polysaccharide synthesis. Both N- and C-terminal domains of WbdA are required for the synthesis of the complete E. coli O9a polysaccharide. The chi sequence location between the two domains and homology plot analyses of the wbdA and the WbdA protein suggested that the wbdA gene might have arisen by fusion of two independent genes.
- Published
- 1998
- Full Text
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3. Bacterial polysaccharide synthesis and gene nomenclature.
- Author
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Reeves PR, Hobbs M, Valvano MA, Skurnik M, Whitfield C, Coplin D, Kido N, Klena J, Maskell D, Raetz CR, and Rick PD
- Subjects
- Computer Communication Networks, Escherichia coli genetics, Genes, Bacterial, Lipopolysaccharides biosynthesis, Multigene Family, O Antigens biosynthesis, O Antigens classification, Salmonella genetics, Transferases genetics, Polysaccharides, Bacterial biosynthesis, Polysaccharides, Bacterial genetics, Terminology as Topic
- Abstract
Gene nomenclature for bacterial surface polysaccharides is complicated by the large number of structures and genes. We propose a scheme applicable to all species that distinguishes different classes of genes, provides a single name for all genes of a given function and greatly facilitates comparative studies.
- Published
- 1996
- Full Text
- View/download PDF
4. Expression of the O9 polysaccharide of Escherichia coli: sequencing of the E. coli O9 rfb gene cluster, characterization of mannosyl transferases, and evidence for an ATP-binding cassette transport system.
- Author
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Kido N, Torgov VI, Sugiyama T, Uchiya K, Sugihara H, Komatsu T, Kato N, and Jann K
- Subjects
- ATP-Binding Cassette Transporters metabolism, Carbohydrate Sequence, Chromosome Mapping, DNA, Bacterial genetics, Mannosyltransferases metabolism, Molecular Sequence Data, Multigene Family, O Antigens, Open Reading Frames, Polysaccharides, Bacterial biosynthesis, Polysaccharides, Bacterial chemistry, Substrate Specificity, Transferases (Other Substituted Phosphate Groups) genetics, Transferases (Other Substituted Phosphate Groups) metabolism, ATP-Binding Cassette Transporters genetics, Escherichia coli genetics, Escherichia coli metabolism, Escherichia coli Proteins, Genes, Bacterial, Mannosyltransferases genetics, Polysaccharides, Bacterial genetics
- Abstract
The rfb gene cluster of Escherichia coli O9 directs the synthesis of the O9-specific polysaccharide which has the structure -->2-alpha-Man-(1-->2)-alpha-Man-(1-->2)-alpha-Man-(1-->3)-alpha- Man-(1-->. The E. coli O9 rfb cluster has been sequenced, and six genes, in addition to the previously described rfbK and rfbM, were identified. They correspond to six open reading frames (ORFs) encoding polypeptides of 261, 431, 708, 815, 381, and 274 amino acids. They are all transcribed in the counter direction to those of the his operon. No gene was found between rfb and his. A higher G+C content indicated that E. coli O9 rfb evolved independently of the rfb clusters from other E. coli strains and from Shigella and Salmonella spp. Deletion mutagenesis, in combination with analysis of the in vitro synthesis of the O9 mannan in membranes isolated from the mutants, showed that three genes (termed mtfA, -B, and -C, encoding polypeptides of 815, 381, and 274 amino acids, respectively) directed alpha-mannosyl transferases. MtfC (from ORF274), the first mannosyl transferase, transfers a mannose to the endogenous acceptor. It critically depended on a functional rfe gene (which directs the synthesis of the endogenous acceptor) and initiates the growth of the polysaccharide chain. MtfB (from ORF381) then transfers two mannoses into the 3 position of the previous mannose, and MtfA (from ORF815) transfers three mannoses into the 2 position. Further chain growth needs only the two transferases MtfA and MtfB. Thus, there are fewer transferases needed than the number of sugars in the repeating unit. Analysis of the predicted amino acid sequence of the ORF261 and ORF431 proteins indicated that they function as components of an ATP-binding cassette transport system. A possible correlation between the mechanism of polymerization and mode of membrane translocation of the products is discussed.
- Published
- 1995
- Full Text
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5. Cloning and analysis of duplicated rfbM and rfbK genes involved in the formation of GDP-mannose in Escherichia coli O9:K30 and participation of rfb genes in the synthesis of the group I K30 capsular polysaccharide.
- Author
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Jayaratne P, Bronner D, MacLachlan PR, Dodgson C, Kido N, and Whitfield C
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- Amino Acid Sequence, Antigens, Bacterial biosynthesis, Antigens, Surface biosynthesis, Antigens, Surface genetics, Bacterial Capsules biosynthesis, Base Sequence, Carbohydrate Sequence, Cloning, Molecular, Escherichia coli classification, Escherichia coli immunology, Guanosine Diphosphate Mannose biosynthesis, Molecular Sequence Data, Multigene Family genetics, O Antigens, Phosphogluconate Dehydrogenase genetics, Sequence Analysis, DNA, Sequence Homology, Nucleic Acid, Serotyping, Escherichia coli genetics, Genes, Bacterial genetics, Nucleotidyltransferases genetics, Phosphotransferases (Phosphomutases) genetics, Polysaccharides, Bacterial biosynthesis
- Abstract
The rfbO9 gene cluster, which is responsible for the synthesis of the lipopolysaccharide O9 antigen, was cloned from Escherichia coli O9:K30. The gnd gene, encoding 6-phosphogluconate dehydrogenase, was identified adjacent to the rfbO9 cluster, and by DNA sequence analysis the gene order gnd-rfbM-rfbK was established. This order differs from that described for other members of the family Enterobacteriaceae. Nucleotide sequence analysis was used to identify the rfbK and rfbM genes, encoding phosphomannomutase and GDP-mannose pyrophosphorylase, respectively. In members of the family Enterobacteriaceae, these enzymes act sequentially to form GDP-mannose, which serves as the activated sugar nucleotide precursor for mannose residues in cell surface polysaccharides. In the E. coli O9:K30 strain, a duplicated rfbM2-rfbK2 region was detected approximately 3 kbp downstream of rfbM1-rfbK1 and adjacent to the remaining genes of the rfbO9 cluster. The rfbM isogenes differed in upstream flanking DNA but were otherwise highly conserved. In contrast, the rfbK isogenes differed in downstream flanking DNA and in 3'-terminal regions, resulting in slight differences in the sizes of the predicted RfbK proteins. RfbMO9 and RfbKO9 are most closely related to CpsB and CpsG, respectively. These are isozymes of GDP-mannose pyrophosphorylase and phosphomannomutase, respectively, which are thought to be involved in the biosynthesis of the slime polysaccharide colanic acid in E. coli K-12 and Salmonella enterica serovar Typhimurium. An E. coli O-:K30 mutant, strain CWG44, lacks rfbM2-rfbK2 and has adjacent essential rfbO9 sequences deleted. The remaining chromosomal genes are therefore sufficient for GDP-mannose formation and K30 capsular polysaccharide synthesis. A mutant of E. coli CWG44, strain CWG152, was found to lack GDP-mannose pyrophosphorylase and lost the ability to synthesize K30 capsular polysaccharide. Wild-type capsular polysaccharide could be restored in CWG152, by transformation with plasmids containing either rfbM1 or rfbM2. Introduction of a complete rfbO9 gene cluster into CWG152 restored synthesis of both O9 and K30 polysaccharides. Consequently, rfbM is sufficient for the biosynthesis of GDP-mannose for both O antigen and capsular polysaccharide E. coli O9:K30. Analysis of a collection of serotype O8 and O9 isolates by Southern hybridization and PCR amplification experiments demonstrated extensive polymorphism in the rfbM-rfbK region.
- Published
- 1994
- Full Text
- View/download PDF
6. Isolation of rfb gene clusters directing the synthesis of O polysaccharides consisting of mannose homopolymers and serological analysis of lipopolysaccharides.
- Author
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Saeki A, Kido N, Sugiyama T, Ohta M, Iwashita T, Uchiya K, and Kato N
- Subjects
- Carbohydrate Conformation, Carbohydrate Sequence, Escherichia coli classification, Escherichia coli immunology, Klebsiella classification, Klebsiella genetics, Klebsiella immunology, Lipopolysaccharides chemistry, Molecular Sequence Data, Multigene Family, O Antigens, Polysaccharides, Bacterial chemistry, Escherichia coli genetics, Genes, Bacterial, Lipopolysaccharides blood, Mannose, Polysaccharides, Bacterial genetics
- Abstract
Four serotypes of two genera, Escherichia coli O8 and O9 and Klebsiella O3 and O5, produce the O polysaccharides consisting of mannose homopolymers. Previously, we reported the isolation and expression of E. coli O9 rfb in E. coli K-12 strains (Kido et al, J. Bacteriol., 171: 3629-3633, 1989). In this study, R' plasmids carrying his-rfb region of the other three strains were isolated and expressed in E. coli K-12 strain. Serological study of lipopolysaccharides (LPS) synthesized in E. coli K-12 strain was carried out. His-linked rfb genes from E. coli O9 and Klebsiella O3 directed the synthesis of O polysaccharides with the same antigenicity as those of the parental strains in E. coli K-12 strain. On the other hand, rfb genes from E. coli O8 and Klebsiella O5 directed the synthesis of O polysaccharides which were antigenically not identical but partially common to those of the parental strains. A rough strain derived from E. coli O8 synthesized LPS which showed the identical antigenicity as the wild strain when the his-rfb region of E. coli O8 was introduced. The results suggest that some genes located distantly from his are additionally required to complete the synthesis of O polysaccharides of E. coli O8 and Klebsiella O5.
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- 1993
- Full Text
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7. Biosynthesis of Klebsiella K2 capsular polysaccharide in Escherichia coli HB101 requires the functions of rmpA and the chromosomal cps gene cluster of the virulent strain Klebsiella pneumoniae Chedid (O1:K2).
- Author
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Arakawa Y, Ohta M, Wacharotayankun R, Mori M, Kido N, Ito H, Komatsu T, Sugiyama T, and Kato N
- Subjects
- Animals, Bacterial Capsules, Blotting, Southern, Carbohydrate Sequence, Cloning, Molecular, DNA, Bacterial genetics, Mice, Molecular Sequence Data, Multigene Family genetics, Nucleic Acid Hybridization, Plasmids genetics, Polysaccharides, Bacterial genetics, Rabbits, Escherichia coli genetics, Gene Expression Regulation, Bacterial genetics, Klebsiella pneumoniae genetics, Polysaccharides, Bacterial biosynthesis, Polysaccharides, Bacterial blood
- Abstract
The genes determining the biosynthesis of type 2 (K2) capsular polysaccharide [3----beta Glc1,4----beta Man(1,3----beta GlcUA) 1,4----alpha Glc1----] of Klebsiella pneumoniae Chedid (O1:K2), which is highly virulent for mice, were cloned and introduced into Escherichia coli HB101 and into four noncapsulated mutants derived from K. pneumoniae reference strains of K1, K7, K9, and K28. The recombinant plasmid pCPS7B06 carried 23 kb of a chromosomal DNA fragment of strain Chedid and encoded a part of the Klebsiella cps gene cluster. However, pCPS7B06 encoded enough genetic information for the production of Klebsiella K2 capsular polysaccharide on the cell surfaces of four noncapsulated mutants of K. pneumoniae. On the other hand, both pCPS7B06 and pROJ3 carrying the rmpA gene locus derived from a resident large plasmid of Chedid were required for the biosynthesis of Klebsiella K2 capsular polysaccharide on the cell surface of E. coli HB101. The insertion inactivation analysis using Tn5 revealed that the cps gene cluster occupied more than 15 kb of the chromosome of Chedid. We conclude that rmpA, which has been known to enhance the biosynthesis of colanic acid in E. coli, is also involved in the biosynthesis of Klebsiella capsular polysaccharide in E. coli HB101.
- Published
- 1991
- Full Text
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8. [Quantitation of IgG antibodies to type Ia group B streptococcal type-specific polysaccharides measured by enzyme-linked immunosorbent assay].
- Author
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Sugiyama M, Kojima M, Yasuda Y, Hori Y, Nishiyama Y, Sugiyama A, Kido N, and Ota M
- Subjects
- Enzyme-Linked Immunosorbent Assay, Female, Fetal Blood immunology, Humans, Pregnancy, Pregnancy Complications, Infectious immunology, Streptococcal Infections immunology, Antibodies, Bacterial analysis, Immunoglobulin G analysis, Polysaccharides, Bacterial immunology, Streptococcus agalactiae immunology
- Abstract
The type-specific polysaccharide antigen of the group B streptococcus (GBS) type Ia as extracted and purified according to the procedures of Kane and Karakawa. Using this purified polysaccharide antigen, we made a sensitive and specific assay system of enzyme-linked immunosorbent assay (ELISA) and measured the titres of of the type-specific antibodies in maternal sera and cord blood sera. The titres of antibodies in 78 pregnant women (26 Ia carriers, 18 other types of GBS carriers and 34 non carriers) were compared. A mother of an infant affected by early onset infection of GBS Ia had a titre of antibody 1:10 at delivery, while 2 years later she became a non carrier and had a titre of antibody over 1:160. The titres of antibodies in 27 pair sera of mothers and cords were well correlated.
- Published
- 1990
- Full Text
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9. Strong adjuvanticity of bacterial lipopolysaccharides possessing the homopolysaccharides consisting of mannose as the O-specific polysaccharide chains.
- Author
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Kato N, Ohta M, Kido N, Naito S, Nakashima I, Nagase F, and Yokochi T
- Subjects
- Animals, Carbohydrate Sequence, Escherichia coli immunology, Female, Klebsiella immunology, Lymph Nodes immunology, Male, Mannose, Mice, Salmonella immunology, Structure-Activity Relationship, Adjuvants, Immunologic, Lipopolysaccharides immunology, Polysaccharides, Bacterial immunology
- Abstract
The lipopolysaccharides (LPS) from Klebsiella 03 and 05 and Escherichia coli 08 and 09 are unique in having linear homopolysaccharides consisting of mannose as the O-specific polysaccharide chains. All four kinds of LPS were found to exhibit very strong adjuvanticity in induction of delayed-type hypersensitivity to ovalbumin in mice compared with other kinds of LPS from Klebsiella, E. coli and Salmonella. Even if the natural forms of Klebsiella 03 LPS and 01 LPS were converted to various defined uniform salt forms, their adjuvanticity did not differ significantly from that of the respective natural forms. It was concluded therefore that the difference in strength of the adjuvanticity between them is not due to the difference in their salt forms, solubility and physical state. Correspondingly, with strong adjuvanticity of Klebsiella 03 LPS and 05 LPS, their activity in enlarging the regional lymph node was also strong. Various uniform salt forms of Klebsiella 03 LPS caused stronger regional lymph node enlargement than those of Klebsiella 01 LPS. However, the activity of E. coli 08 LPS and 09 LPS in enlarging the regional lymph node was significantly weaker than that of Klebsiella 03 LPS and 05 LPS, and there were other kinds of LPS which showed a capacity to enlarge the regional lymph node similar to that of E. coli 08 LPS and 09 LPS, despite their weak adjuvanticity. Therefore, correlation did not necessarily exist between the degree of adjuvanticity of LPS and its activity in enlarging the regional lymph node.
- Published
- 1985
10. Contribution of the mannan O side-chains to the adjuvant action of lipopolysaccharides.
- Author
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Ohta M, Kido N, Hasegawa T, Ito H, Fujii Y, Arakawa Y, Komatsu T, and Kato N
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- Animals, Antibodies, Anti-Idiotypic biosynthesis, Chemical Phenomena, Chemistry, Electrophoresis, Polyacrylamide Gel, Escherichia coli metabolism, Female, Hypersensitivity, Delayed, Klebsiella pneumoniae metabolism, Lymphocyte Activation, Mice, Mice, Inbred Strains, Salmonella metabolism, gamma-Globulins immunology, Adjuvants, Immunologic pharmacology, Lipopolysaccharides immunology, Mannans immunology, Polysaccharides, Bacterial immunology
- Abstract
Klebsiella 03 lipopolysaccharide (LPS) and Escherichia coli 09 LPS were previously shown to have potent adjuvant activities in augmenting antibody response and delayed-type hypersensitivity to protein antigens. The R form LPS extracted from the O-specific polysaccharide-less mutants derived from Klebsiella 03 and E. coli 09 strains were characterized by chemical and electrophoretic analyses. The adjuvant activities of the R-LPS in augmenting antibody response and DTH to protein antigens were much weaker than those of the parental LPS. The strength of the adjuvant activities of the R-LPS was similar to that of the activities of Salmonella minnesota LPS and Ra-LPS. By contrast, polyclonal B-cell activation effects of the R-LPS were stronger than those of the parental LPS. The common feature of the parental LPS is that their O-specific polysaccharides are mannose homopolymers (mannans). From these results, it is suggested that mannose homopolymers as the O side-chains of LPS contribute to the action of LPS in enhancing strongly the T-cell dependent immune responses to protein antigens.
- Published
- 1987
11. Comparative studies on antitumor activity of Klebsiella O3 lipopolysaccharide and its polysaccharide fraction in mice.
- Author
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Hasegawa T, Ohta M, Kido N, Kato N, Miyamoto K, and Koshiura R
- Subjects
- Animals, Female, Hydrolysis, Mice, Mice, Inbred BALB C, Mice, Inbred C3H, Neoplasms, Experimental drug therapy, Antineoplastic Agents, Klebsiella metabolism, Lipopolysaccharides pharmacology, Polysaccharides, Bacterial pharmacology
- Abstract
The antitumor activity of the polysaccharide fraction (OPS) obtained by the acid hydrolysis of Klebsiella O3 lipopolysaccharide (KO3 LPS) isolated from the culture supernatant of the decapsulated mutant strain LEN-1 (03: K1-) against both allogeneic tumor and syngeneic tumor systems in mice was compared with that of KO3 LPS. OPS prolonged the life span of MM2-bearing C3H/He mice by intraperitoneal (i.p.) pre- and post-treatment at the doses of 100 and 1000 mg/kg. However, large amounts of OPS were needed to show the antitumor activity as compared with KO3 LPS. OPS showed no growth inhibitory activity against Meth-A sarcoma in BALB/c mice by i.p., intravenous (i.v.) or intratumoral (i.t.) administration. When 1000 mg/kg of OPS was i.p. administered once a day for 10 days, OPS significantly inhibited the tumor growth of Sarcoma-180 solid type tumor. On the other hand, KO3 LPS significantly suppressed the growth of Meth-A tumor by i.t. administration at the doses of 0.3 and 1.0 mg/kg and showed complete regression in 8 and 9 out of 10 mice, respectively. In MM2 tumor, KO3 LPS also showed complete regression in all mice post-treated by i.p. administration at the dose of 1.0 mg/kg. These results suggest that OPS has antitumor activity on the tumors used in this study, but the activity was less than that of KO3 LPS.
- Published
- 1985
- Full Text
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12. Contribution of the mannan O side-chains to the adjuvant action of lipopolysaccharides
- Author
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Ohta, M, Kido, N, Hasegawa, T, Ito, H, Fujii, Y, Arakawa, Y, Komatsu, T, and Kato, N
- Subjects
Lipopolysaccharides ,Chemical Phenomena ,Polysaccharides, Bacterial ,Mice, Inbred Strains ,Lymphocyte Activation ,Antibodies, Anti-Idiotypic ,Mannans ,Chemistry ,Klebsiella pneumoniae ,Mice ,Adjuvants, Immunologic ,Salmonella ,Escherichia coli ,Animals ,lipids (amino acids, peptides, and proteins) ,Electrophoresis, Polyacrylamide Gel ,Female ,Hypersensitivity, Delayed ,gamma-Globulins ,Research Article - Abstract
Klebsiella 03 lipopolysaccharide (LPS) and Escherichia coli 09 LPS were previously shown to have potent adjuvant activities in augmenting antibody response and delayed-type hypersensitivity to protein antigens. The R form LPS extracted from the O-specific polysaccharide-less mutants derived from Klebsiella 03 and E. coli 09 strains were characterized by chemical and electrophoretic analyses. The adjuvant activities of the R-LPS in augmenting antibody response and DTH to protein antigens were much weaker than those of the parental LPS. The strength of the adjuvant activities of the R-LPS was similar to that of the activities of Salmonella minnesota LPS and Ra-LPS. By contrast, polyclonal B-cell activation effects of the R-LPS were stronger than those of the parental LPS. The common feature of the parental LPS is that their O-specific polysaccharides are mannose homopolymers (mannans). From these results, it is suggested that mannose homopolymers as the O side-chains of LPS contribute to the action of LPS in enhancing strongly the T-cell dependent immune responses to protein antigens.
- Published
- 1987
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