13 results on '"Özbek, Uğur"'
Search Results
2. The Role of the Local Bone Marrow Renin-Angiotensin System in Multiple Myeloma.
- Author
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Saka, Bülent, Sayitoğlu, Müge, İstemihan, Zülal, Karan, M. Akif, Erten, Nilgün, Doğan, Öner, Özbek, Uğur, Genç, Sema, Taşçıoğlu, Cemil, and Kalayoğlu-Beşışık, Sevgi
- Subjects
BLOOD coagulation factors ,BONE marrow ,CELL receptors ,COMPARATIVE studies ,IMMUNOHISTOCHEMISTRY ,MESSENGER RNA ,MULTIPLE myeloma ,NEOVASCULARIZATION ,POLYMERASE chain reaction ,STAINS & staining (Microscopy) ,RENIN-angiotensin system ,QUANTITATIVE research ,VASCULAR endothelial growth factors ,REVERSE transcriptase polymerase chain reaction - Abstract
Copyright of Turkish Journal of Hematology is the property of Galenos Yayinevi Tic. LTD. STI and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2019
- Full Text
- View/download PDF
3. A Possible Role for WNT5A Hypermethylation in Pediatric Acute Lymphoblastic Leukemia.
- Author
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Ng, Özden Hatırnaz, Fırtına, Sinem, Can, İsmail, Karakaş, Zeynep, Ağaoğlu, Leyla, Doğru, Ömer, Celkan, Tiraje, Akçay, Arzu, Yıldırmak, Yıldız, Timur, Çetin, Özbek, Uğur, and Sayitoğlu, Müge
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GENE expression ,LIGANDS (Biochemistry) ,LYMPHOBLASTIC leukemia ,METHYLATION ,POLYMERASE chain reaction ,RNA ,DESCRIPTIVE statistics ,DEOXYCYTIDINE ,SEQUENCE analysis ,EPIGENOMICS ,PHARMACODYNAMICS - Abstract
Copyright of Turkish Journal of Hematology is the property of Galenos Yayinevi Tic. LTD. STI and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2015
- Full Text
- View/download PDF
4. Local Renin-Angiotensin System in Normal Hematopoietic and Multiple Myeloma-Related Progenitor Cells.
- Author
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Uz, Burak, Çatal Tatonyan, Suzin, Sayitoğlu, Müge, Erbilgin, Yücel, Hatırnaz, Özden, Aksu, Salih, Büyükaşık, Yahya, Sayınalp, Nilgün, Göker, Hakan, Özcebe, Osman İ., Özbek, Uğur, and Haznedar Oğlu, İbrahim C.
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BONE marrow ,GENE expression ,HEMATOPOIESIS ,HEMATOPOIETIC stem cells ,MULTIPLE myeloma ,POLYMERASE chain reaction ,U-statistics ,RENIN-angiotensin system ,DATA analysis software ,DESCRIPTIVE statistics - Abstract
Copyright of Turkish Journal of Hematology is the property of Galenos Yayinevi Tic. LTD. STI and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2014
- Full Text
- View/download PDF
5. Upregulation of T-Cell-Specific Transcription Factor Expression in Pediatric T-Cell Acute Lymphoblastic Leukemia (T-ALL).
- Author
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Sayitoğlu, Müge, Erbilgin, Yücel, Ng, Özden Hatırnaz, Yıldız, İnci, Celkan, Tiraje, Anak, Sema, Devecioğlu, Ömer, Aydoğan, Gönül, Karaman, Serap, Sarper, Nazan, Timur, Çetin, Üre, Ümit, and Özbek, Uğur
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LYMPHOBLASTIC leukemia prognosis ,ACADEMIC medical centers ,FISHER exact test ,GENE expression ,LYMPHOBLASTIC leukemia ,ONCOGENES ,POLYMERASE chain reaction ,RESEARCH funding ,SURVIVAL analysis (Biometry) ,T cells ,U-statistics ,DATA analysis software ,DESCRIPTIVE statistics ,GENETICS - Abstract
Copyright of Turkish Journal of Hematology is the property of Galenos Yayinevi Tic. LTD. STI and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2012
- Full Text
- View/download PDF
6. Analysis of Chromosomal Aberrations and FLT3 gene Mutations in Childhood Acute Myelogenous Leukemia Patients.
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Coşkunpınar, Ender, Anak, Sema, Ağaoğlu, Leyla, Ünüvar, Ayşegül, Devecioğlu, Ömer, Aydoğan, Gönül, Timur, Çetin, Öner, Ahmet Faik, Yıldırmak, Yıldız, Celkan, Tiraje, Yıldız, İnci, Sarper, Nazan, and Özbek, Uğur
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RNA analysis ,BONE marrow examination ,CHROMOSOME abnormalities ,STATISTICAL correlation ,FISHER exact test ,HEMOGLOBINS ,LEUCOCYTES ,GENETIC mutation ,POLYMERASE chain reaction ,RESEARCH funding ,TUMORS in children ,ACUTE myeloid leukemia ,DATA analysis software ,DESCRIPTIVE statistics - Abstract
Copyright of Turkish Journal of Hematology is the property of Galenos Yayinevi Tic. LTD. STI and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2012
- Full Text
- View/download PDF
7. ABL gene kinase domain mutation scanning by denaturing high performance liquid chromatography sequencing method.
- Author
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Erbilgin, Yücel, Çatal, Suzin, Eşkazan, Ahmet Emre, Hatırnaz, Özden, Soysal, Teoman, and Özbek, Uğur
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DRUG therapy ,IMATINIB ,DRUG resistance in cancer cells ,GENETIC techniques ,HIGH performance liquid chromatography ,GENETIC mutation ,POLYMERASE chain reaction ,RESEARCH funding ,ACUTE myeloid leukemia ,GENETICS - Abstract
Copyright of Turkish Journal of Hematology is the property of Galenos Yayinevi Tic. LTD. STI and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2011
- Full Text
- View/download PDF
8. Minimal residual disease (MRD) detection with translocations and T-cell receptor and immunoglobulin gene rearrangements in adult acute lymphoblastic leukemia patients: a pilot study.
- Author
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Sayitoğlu, Müge, Ar, M. Cem, Hatırnaz, Özden, Öngören, Şeniz, Üre, Ümit, Başlar, Zafer, Sırma, Sema, Aydın, Yıldız, Özbek, Uğur, and Ferhanoğlu, Burhan
- Subjects
LYMPHOBLASTIC leukemia ,HEALTH risk assessment ,T-cell receptor genes ,IMMUNOGLOBULIN genes ,ANTIBODY diversity ,POLYMERASE chain reaction ,CHROMOSOME abnormalities ,DRUG therapy - Abstract
Copyright of Turkish Journal of Hematology is the property of Galenos Yayinevi Tic. LTD. STI and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2008
9. IS AML1/ETO GENE EXPRESSION A GOOD PROGNOSTIC FACTOR IN PEDIATRIC ACUTE MYELOBLASTIC LEUKEMIA?
- Author
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Sarper, Nazan, Özbek, Uğur, Ağaoğlu, Leyla, Özgen, Ünsal, Erílmaz, Ertuğrul, and Yalman, Nevin
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ACUTE myeloid leukemia in children , *POLYMERASE chain reaction - Abstract
To assess the clinical significance of AML1/ETO gene detected by nested reverse transcriptase polymerase chain reaction, the outcome of 7 patients with acute myeloblastic leukemia between 3 and 14 years of age were presented. All patients had complete remission (CR) at the end of induction (AMLMRC 10 protocol) and 4 underwent unpurged autologous, 2 allogeneic (from matced siblings) non-T-cell-depleted bone marrow transplantations (BMT) in first CR. One patient died due to allogeneic BMT-related complications, and 4 patients relapsed at 13, 17, 18, and 26 months. Only one patient achieved second CR. All relapsed patients died between 18 and 36 months with resistant disease (n = 3) or infection during salvage chemotherapy (n = 1). Two patients who had autologous BMT are alive and disease free at 44 and 50 months. Although statistical significance could not be shown, event-free survival and overall survival rates of AML1/ETO-positive patients (28.57 and 28.57% , respectively) at 3.5 years were even lower than those of AML1/ETO-negative patients. The results confirm some previous reports that AML1/ETO gene in children and adolescents is not a favorable prognostic factor. [ABSTRACT FROM AUTHOR]
- Published
- 2000
- Full Text
- View/download PDF
10. Temporal Lob Epilepsili Hastalarda MDR1 Gen Polimorfizmi İle İlişki.
- Author
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ÇİNE, Naci, SARGIN, Gülcan, BEBEK, Nerses, GÜRSES, Candan, BAYKAN, Betül, ÖZBEK, Uğur, and GÖKYİĞİT, Ayşen
- Subjects
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TEMPORAL lobe epilepsy , *GENETIC polymorphisms , *MULTIDRUG resistance , *POLYMERASE chain reaction , *CLINICAL medicine , *POPULATION genetics , *STATISTICAL correlation , *PATHOLOGICAL physiology , *THERAPEUTICS - Abstract
Objective: 30-40% of patients with epilepsy have resistance to medical treatment. The major genetic mechanism postulated to underlie this resistance known as Multidrug resistance gene 1 (MDR1), transports the drugs from intracellular to extracellular area. Methods: 103 temporal lobe epilepsy patients' (59 of the patients had mesial temporal sclerosis and 44 patients had cryptogenic etiology) and 174 healthy controls' samples were evaluated for MDR1 gene (C3435T) polymorphism by polimerase chain reaction and restriction fragment length polymorphisms. Results: In all patients and TLE patients without MTS, CT genotype was found to be lower than that of the control group (p=0,004 ve p=0,008). CT genotype was statistically lower in the group without MTS than the group with MTS (p=0,0008). It is noted that the patients with a history of status epilepticus had significantly higher MDR1 gene TT genotype (p=0,027). There was no correlation between other clinical features and MDR1 genotype. Conclusions: Despite the difference of heterozygote CT genotype frequency in patient and control populations, no correlation between clinical features and MDR1 genotype was found. This data may show diverse genetic background of different populations. Studies of mutation analysis will play an important role to understand the pathophysiology of this disease. [ABSTRACT FROM AUTHOR]
- Published
- 2013
11. Expression of IFITM1 in chronic myeloid leukemia patients
- Author
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Akyerli, Cemaliye Boylu, Beksac, Meral, Holko, Michelle, Frevel, Mathias, Dalva, Klara, Özbek, Uğur, Soydan, Ender, Özcan, Muhit, Özet, Gülsüm, İlhan, Osman, Gürman, Günhan, Akan, Hamdi, Williams, Bryan R.G., and Özçelik, Tayfun
- Subjects
- *
MYELOID leukemia , *INTERFERONS , *POLYMERASE chain reaction , *CELL adhesion - Abstract
Abstract: We investigated the peripheral blood gene expression profile of interferon induced transmembrane protein 1 (IFITM1) in sixty chronic myeloid leukemia (CML) patients classified according to new prognostic score (NPS). IFITM1 is a component of a multimeric complex involved in the trunsduction of antiproliferative and cell adhesion signals. Expression level of IFITM1 was found significantly different between the high- and low-risk groups (P = 9.7976 × 10-11) by real-time reverse transcription polymerase chain reaction (RT-PCR). Higher IFITM1 expression correlated with improved survival (P = 0.01). These results indicate that IFITM1 expression profiling could be used for molecular classification of CML, which may also predict survival. [Copyright &y& Elsevier]
- Published
- 2005
- Full Text
- View/download PDF
12. Stem-loop RT-polimeraz zincir reaksiyonu (PZR) yöntemi ile mikro RNA (miRNA) gen anlatım farklılıklarının tespiti
- Author
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Mavi, Nurhan, Özbek, Uğur, and Genetik Anabilim Dalı
- Subjects
Catenin ,Micro RNA ,Leukemia ,Genetics ,Precursor cell lymphoblastic leukemia-lymphoma ,Gene expression ,Genetik ,Polymerase chain reaction - Abstract
MikroRNA lar (miRNA), 19-23 nükleotid uzunluğunda küçük, tek iplikli ve fonksiyonel protein kodlamayan RNA?lardır. miRNA lar gelişim, hücre farklılaşması, apoptoz ve proliferasyon gibi önemli biyolojik süreçlerde görev yaparlar. Gelişim esnasında ve gen anlatımında büyük roller üstlendiklerinin bilinmesine rağmen normal ve neoplastik hücrelerdeki anlatım düzeyleri ve fonksiyonları hakkında sınırlı sayıda bilgi mevcuttur. Ayrıca miRNA, hem tümör baskılayıcı genleri (TS) hem de onkogenleri regüle etmektedirler, bu fonksiyonları bakımından oncomiR veya TS miRNA olarak adlandırılırlar. miRNA lar hematopoetik hastalıklarda rol oynamaktadır. miRNA gen anlatımlarının farklı kanser türlerinde belirlenmesi, kanser tanı ve tedavisinde de kullanılabilecek önemli bir araç olarak görülmektedir.Çalışmamızda ALL hastalarının (n=42) kemik iliği örnekleri ve ALL açısından sağlıklı bireyin (n=3) periferik kanlarından elde edilen CD19+ örneklerin daha önce yapılan çalışmalar sonucu lösemi hastalarında gen anlatımının aşırı derecede artmış olduğu belirlenen Beta-katenin (CTNNB1) genini hedef alan miR-214 mikroRNA'sı, Stem Loop Ters Transkriptaz Polimeraz Zincir Reaksiyonu (Stem-Loop RT-PZR) ile incelenmiştir.Yayınlarda miR-214'ün CTNNB1'i direkt olarak hedeflediği bildirildiğinden CTNNB1 seviyesi artarken miR-214 seviyesinin azalması beklenirdi fakat çalışmamız sonucu hasta grubumuzda her iki mRNA düzeyinin, miR-214 (p=0,6989) ve CTNNB1(p=0,5027), yüksek olduğu belirlendi. Bu nedenle, diğer hastalıklardan farklı olarak B-ALL hastalarında miR-214'ün CTNNB1'i dolaylı yoldan etkilediği düşüncesine varılmıştır. Ayrıca farklı klinik özellikler ile miR-214 anlatımı arasındaki ilişkiler araştırılmıştır. Bunun yanında çalışmada işlevselliği ve yüksek hassasiyeti nedeniyle seçilen Stem-Loop RT qPZR yöntemi ilk defa B-ALL patogenezi ve miRNA ilişkisinin araştırılmasında uygulanmış ve bu çalışma ile yöntem bölümümüzde farklı araştırmalarda kullanılmaya başlanmıştır. MicroRNAs (miRNAs) are small (~19/23 nt in length), non-protein coding RNAs and play important roles in biological processes like development, cell differentiation, proliferation and apoptosis. Their role in development and gene expression are well known where as limited evidence is published on their roles in normal and neoplastic cells regulations. miRNAs which are associated with various cancers, are located especially in fragile regions of chromosomes. In addition, miRNAs are regulate the tumor suppressor and oncogenes therefore they called as 97
- Published
- 2013
13. T hücreli akut lenfoblastik lösemili hastalarda mikroRNA (miRNA) anlatımının tespiti
- Author
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Öztunç, Ceren, Özbek, Uğur, and Genetik Anabilim Dalı
- Subjects
Micro RNA ,Transforming growth factor-beta ,Leukemia ,Genetics ,Precursor cell lymphoblastic leukemia-lymphoma ,Apoptosis ,Gene expression ,Genetik ,Medical Biology ,Tıbbi Biyoloji ,Polymerase chain reaction - Abstract
Mikro RNAlar (miRNA), 19-23 nükleotid uzunluğunda küçük, fonksiyonel protein kodlamayan, tek iplikli RNA'lardır. Apoptoz, farklılaşma ve proliferasyon vb pek çok hücresel yolakta görev alırlar. Yapılan araştırmalarda miRNAlardaki mutasyon veya gen anlatımı seviyesi değişimleri kanseri de içine alan birçok hastalığın süreci ile ilişkilendirilmiştir. Ayrıca bilinen miRNAların %50'sinden fazlasının tümör oluşumuna onkogen ya da tümör baskılayıcı genleri hedefleyerek katkıda bulunabildikleri gösterilmiştir. Çalışmamızda bu veriler doğrultusunda T hücreli akut lenfoblastik lösemi (T-ALL) tanısı almış hastalarda (n=42) Transforme Edici Büyüme Faktör ß (TGFß) yolağı üyelerinden SKIL genini hedefleyen mir-223 anlatımı, Stem Loop Revers Transkriptaz-Kantitatif Gerçek Zamanlı Polimeraz Zincir reaksiyonu yöntemi ile tespit edildi. Kontrol olarak kullanılan timositlere (n=3) kıyasla artmış mir-223 anlatımı tespit edildi (p=0.004). Ayrıca SKIL geni anlatım profili ile mir-223 gen anlatımı arasında ilişki araştırıldı. mir-223 anlatımının T soyu hücrelerine özgün olup olmadığını tartışabilmek için B hücreli lösemi (B-ALL) hastalarında da bu mikroRNA'nın anlatımı tespit edildi (n=11). Sonuçta kontrol CD19+ periferik kan hücrelerine kıyasla B-ALL hastalarında anlatım azalmış bulundu (p=0.012). Bir başka deyişle mir-223 aracılığıyla gerçekleştiği düşünülen düzenlemenin T- hücrelerine ve T-ALL hastalarına özgü olduğu görüldü. T-ALL, lösemiler arasında ağır seyri olan, tedaviye dirençli ve hastalığın takip edilebileceği özgün belirteçlerin henüz bulunamadığı bir hastalık grubudur. Elde edilen bulguların hastalığın patogenizinin aydınlatılmasına yardımcı olması, tedavisinde ise hastalığa özgün yeni biyobelirteçler olarak kullanılabilmesini amaçlamaktayız. MicroRNAs (miRNAs) are small, single stranded, non-coding RNAs of 19?25 nucleotide length. MicroRNAs play a crucial role in fundamental processes such as apoptosis, differentiation and proliferation. Several publications have showed that changes in microRNA expression profile or mutations in miRNAs have association with various cancer types. Also 50% of miRNAs contribute tumorogenesis by targeting tumor supressor genes or oncogenes. According to all these findings, we analysed the mir-223 expression levels, targeting SKIL gene which is a member of the transforming growth factor ß signaling pathway (TGFß), by Stem Loop-Reverse Transcriptase-Real Time Polimerase Chain Reaction (PCR) method in patients with pediatric T cell leukemia (T-ALL) (n=42). When results were compared with control cells (thymocytes, (n=3)) we found significant up-regulation (p=0.004) in mir-223 expression levels. Besides, we analysed the correlation between mir-223 expression profiles and downregulated SKIL gene expression profiles. On the other hand to be sure about whether mir-233 over expression is specific to T lineage or not, we alsoanalysed mir-223 expression levels in B cell acute lymphoblastic leukemia (B-ALL) patients (n=11), down-regulation was also observed in B-ALL patients compared to control CD19+ cells (p=0.012). Here we provided significant findings that, the rearrangement due to mir-223 is T-ALL or T lineage specific.T-ALL has a poor prognosis, resistance to treatment protocols and there are not any specific biomarkers for patient follow up yet. By our results, we aimed to identfy new, more specific biomarkers for the follow-up and treatment stages of T-ALL patients. These findings may help to understand the mechanism underlying the leukemia pathogenesis more clearly. 97
- Published
- 2012
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