28 results on '"Bonanomi, Giuliano"'
Search Results
2. Phytoremediation efficiency of Portulaca oleracea L. naturally growing in some industrial sites, Dakahlia District, Egypt.
- Author
-
Elshamy MM, Heikal YM, and Bonanomi G
- Subjects
- Biodegradation, Environmental, Egypt, Soil Pollutants analysis, Metals, Heavy chemistry, Plants chemistry, Portulaca chemistry, Soil Pollutants chemistry
- Abstract
Phytoremediation is an economic process through exploitation of plants capacity to accumulate heavy metals in polluted habitats by their harvestable parts. In the present investigation, Portulaca oleracea was examined to estimate its role in the accumulation of Mn(II), Cu(II), Zn(II), Fe(III) and Pb(II) ions and recognize its persistence against the industrial effluent toxicity from different farmlands located beside these regions (S1:S9) in Dakahlia district, Egypt. The most recorded associate plants were; Amaranthus viridus, Malva parviflora, Chenopodium murale and Echinochloa colonum, which have high potentiality of heavy metals (HM) accumulation. The phytoremediation efficiency (bioconcentration factor (BCF), bioaccumulation factor (BF), translocation factor (TF), enrichment coefficient of shoot (ECS) and element accumulation index (EAI)) of P. oleracea were calculated. Considering the results, S7 showed the highest BCF value for Cu(II), 7.40; Fe(III), 2.06; and Zn(II), 4.33, while Mn(II), 2.06 at S1 and Pb(II), 3.89 at S3. BF and TF values were less than unity 1.0 for most of the sites. However, ECS values showed small variations among the investigated HM at the nine sites. EAI values were higher in shoots out of all the sites except S2 > EAI of roots of the same sites. Also, there was positive correlation between the soil HM concentrations in most sites. Moreover, total protein was estimated quantitatively and qualitatively. The protein profile showed 16 bands of molecular weight ranged from 30.9 to 240.6 KDa. Finally, P. oleracea can be used for decontamination of soils with heavy metals due to the high ecological amplitude and phytoremediation characteristics., (Copyright © 2019 Elsevier Ltd. All rights reserved.)
- Published
- 2019
- Full Text
- View/download PDF
3. Comparing chemistry and bioactivity of burned vs. decomposed plant litter: different pathways but same result?
- Author
-
Bonanomi G, Incerti G, Abd El-Gawad AM, Cesarano G, Sarker TC, Saulino L, Lanzotti V, Saracino A, Rego FC, and Mazzoleni S
- Subjects
- Carbon, Fungi, Plant Development, Soil chemistry, Ecosystem, Plants
- Abstract
Litter burning and biological decomposition are oxidative processes co-occurring in many terrestrial ecosystems, producing organic matter with different chemical properties and differently affecting plant growth and soil microbial activity. We tested the chemical convergence hypothesis, i.e., materials with different initial chemistry converge toward a common profile, with similar biological effects, as the oxidative process advances, for burning and decomposition. We compared the molecular composition, assessed by
13 C NMR, of seven plant litter types either fresh, decomposed for 30, 90, 180 d in a microcosms incubation experiment, or heated at 100°C, 200°C, 300°C, 400°C, 500°C for 30 minutes. We used litter water extracts (5% dry weight) as treatments in bioassays on plant (Lepidium sativum) and fungal (Aspergillus niger) growth, and a washed quartz sand amended with litter (0.5% dw) to assess heterotrophic respiration by flux chamber (i.e., [μg of CO2 released]·[g added litter]-1 ·d-1 ). We observed different molecular variations for materials either burning (i.e., a sharp increase of aromatic C and a decrease of other fractions above 200°C) or decomposing (i.e., early increase of alkyl, methoxyl, and N-alkyl C and decrease of O-alkyl and di-O-alkyl C fractions). Soil respiration and fungal growth decreased with litter age and heating severity, down to 20% relative to fresh litter. Plants were inhibited on fresh litter (on average 13% of the control), but recovered on aged (180 d) and heated (30 min at 500°C) materials, up to 126% and 63% of the control, respectively. Correlation between the intensity of13 C NMR signals in litter spectra and bioassay results showed that O-alkyl, methoxyl, and aromatic C fractions are crucial to understand organic matter effects, with plant response negatively affected by labile C but positively associated to lignification and pyrogenic C. The pattern of association of soil respiration and fungal growth to these C fractions was essentially opposite to that observed for plant root growth. Our findings suggest a functional convergence of decomposed and burned organic substrates, emerging from the balance between the bioavailability of labile C sources and the presence of recalcitrant and pyrogenic compounds, oppositely affecting different trophic levels., (© 2017 by the Ecological Society of America.)- Published
- 2018
- Full Text
- View/download PDF
4. Litter chemistry explains contrasting feeding preferences of bacteria, fungi, and higher plants.
- Author
-
Bonanomi G, Cesarano G, Lombardi N, Motti R, Scala F, Mazzoleni S, and Incerti G
- Subjects
- Bacteria chemistry, Fungi chemistry, Magnetic Resonance Spectroscopy, Plants chemistry, Bacteria metabolism, Biochemical Phenomena, Fungi metabolism, Nutritional Physiological Phenomena, Plants metabolism
- Abstract
Litter decomposition provides a continuous flow of organic carbon and nutrients that affects plant development and the structure of decomposer communities. Aim of this study was to distinguish the feeding preferences of microbes and plants in relation to litter chemistry. We characterized 36 litter types by
13 C-CPMAS NMR spectroscopy and tested these materials on 6 bacteria, 6 fungi, and 14 target plants. Undecomposed litter acted as a carbon source for most of the saprophytic microbes, although with a large variability across litter types, severely inhibiting root growth. An opposite response was found for aged litter that largely inhibited microbial growth, but had neutral or stimulatory effects on root proliferation.13 C-CPMAS NMR revealed that restricted resonance intervals within the alkyl C, methoxyl C, O-alkyl C and di-O-alkyl C spectral regions are crucial for understanding litter effects. Root growth, in contrast to microbes, was negatively affected by labile C sources but positively associated with signals related to plant tissue lignification. Our study showed that plant litter has specific and contrasting effects on bacteria, fungi and higher plants, highlighting that, in order to understand the effects of plant detritus on ecosystem structure and functionality, different microbial food web components should be simultaneously investigated.- Published
- 2017
- Full Text
- View/download PDF
5. The Influence of Plant Litter on Soil Water Repellency: Insight from 13C NMR Spectroscopy.
- Author
-
Cesarano G, Incerti G, and Bonanomi G
- Subjects
- Plant Leaves, Principal Component Analysis, Carbon-13 Magnetic Resonance Spectroscopy, Plants chemistry, Soil chemistry, Water chemistry
- Abstract
Soil water repellency (SWR, i.e. reduced affinity for water owing to the presence of organic hydrophobic coatings on soil particles) has relevant hydrological implications because low rates of infiltration enhance water runoff, and untargeted diffusion of fertilizers and pesticides. Previous studies investigated the occurrence of SWR in ecosystems with different vegetation cover but did not clarify its relationships with litter biochemical quality. Here, we investigated the capability of different plant litter types to induce SWR by using fresh and decomposed leaf materials from 12 species, to amend a model sandy soil over a year-long microcosm experiment. Water repellency, measured by the Molarity of an Ethanol Droplet (MED) test, was tested for the effects of litter species and age, and compared with litter quality assessed by 13C-CPMAS NMR in solid state and elemental chemical parameters. All litter types were highly water repellent, with MED values of 18% or higher. In contrast, when litter was incorporated into the soil, only undecomposed materials induced SWR, but with a large variability of onset and peak dynamics among litter types. Surprisingly, SWR induced by litter addition was unrelated to the aliphatic fraction of litter. In contrast, lignin-poor but labile C-rich litter, as defined by O-alkyl C and N-alkyl and methoxyl C of 13C-CPMAS NMR spectral regions, respectively, induced a stronger SWR. This study suggests that biochemical quality of plant litter is a major controlling factor of SWR and, by defining litter quality with 13C-CPMAS NMR, our results provide a significant novel contribution towards a full understanding of the relationships between plant litter biochemistry and SWR.
- Published
- 2016
- Full Text
- View/download PDF
6. Inhibitory effects of extracellular self-DNA: a general biological process?
- Author
-
Mazzoleni S, Cartenì F, Bonanomi G, Senatore M, Termolino P, Giannino F, Incerti G, Rietkerk M, Lanzotti V, and Chiusano ML
- Subjects
- Animals, Bacillus subtilis drug effects, Bacillus subtilis growth & development, Ecosystem, Extracellular Space genetics, Physarum polycephalum drug effects, Physarum polycephalum growth & development, Sarcophagidae growth & development, Scenedesmus drug effects, Scenedesmus growth & development, Soil, Species Specificity, Trichoderma drug effects, Trichoderma growth & development, Arabidopsis genetics, DNA pharmacology, Plants drug effects, Sarcophagidae drug effects
- Abstract
Self-inhibition of growth has been observed in different organisms, but an underlying common mechanism has not been proposed so far. Recently, extracellular DNA (exDNA) has been reported as species-specific growth inhibitor in plants and proposed as an explanation of negative plant-soil feedback. In this work the effect of exDNA was tested on different species to assess the occurrence of such inhibition in organisms other than plants. Bioassays were performed on six species of different taxonomic groups, including bacteria, fungi, algae, plants, protozoa and insects. Treatments consisted in the addition to the growth substrate of conspecific and heterologous DNA at different concentration levels. Results showed that treatments with conspecific DNA always produced a concentration dependent growth inhibition, which instead was not observed in the case of heterologous DNA. Reported evidence suggests the generality of the observed phenomenon which opens new perspectives in the context of self-inhibition processes. Moreover, the existence of a general species-specific biological effect of exDNA raises interesting questions on its possible involvement in self-recognition mechanisms. Further investigation at molecular level will be required to unravel the specific functioning of the observed inhibitory effects., (© 2015 The Authors New Phytologist © 2015 New Phytologist Trust.)
- Published
- 2015
- Full Text
- View/download PDF
7. Vegetation pattern formation due to interactions between water availability and toxicity in plant-soil feedback.
- Author
-
Marasco A, Iuorio A, Cartení F, Bonanomi G, Tartakovsky DM, Mazzoleni S, and Giannino F
- Subjects
- Climatic Processes, Computer Simulation, Ecosystem, Feedback, Physiological, Mathematical Concepts, Models, Biological, Plant Development drug effects, Plants drug effects, Soil chemistry, Water metabolism, Plants metabolism
- Abstract
Development of a comprehensive theory of the formation of vegetation patterns is still in progress. A prevailing view is to treat water availability as the main causal factor for the emergence of vegetation patterns. While successful in capturing the occurrence of multiple vegetation patterns in arid and semiarid regions, this hypothesis fails to explain the presence of vegetation patterns in humid environments. We explore the rich structure of a toxicity-mediated model of the vegetation pattern formation. This model consists of three PDEs accounting for a dynamic balance between biomass, water, and toxic compounds. Different (ecologically feasible) regions of the model's parameter space give rise to stable spatial vegetation patterns in Turing and non-Turing regimes. Strong negative feedback gives rise to dynamic spatial patterns that continuously move in space while retaining their stable topology.
- Published
- 2014
- Full Text
- View/download PDF
8. Negative plant soil feedback explaining ring formation in clonal plants.
- Author
-
Cartenì F, Marasco A, Bonanomi G, Mazzoleni S, Rietkerk M, and Giannino F
- Subjects
- Biomass, Clone Cells, Computer Simulation, Ecosystem, Models, Biological, Feedback, Plant Physiological Phenomena, Plants anatomy & histology, Soil
- Abstract
Ring shaped patches of clonal plants have been reported in different environments, but the mechanisms underlying such pattern formation are still poorly explained. Water depletion in the inner tussocks zone has been proposed as a possible cause, although ring patterns have been also observed in ecosystems without limiting water conditions. In this work, a spatially explicit model is presented in order to investigate the role of negative plant-soil feedback as an additional explanation for ring formation. The model describes the dynamics of the plant biomass in the presence of toxicity produced by the decomposition of accumulated litter in the soil. Our model qualitatively reproduces the emergence of ring patterns of a single clonal plant species during colonisation of a bare substrate. The model admits two homogeneous stationary solutions representing bare soil and uniform vegetation cover which depend only on the ratio between the biomass death and growth rates. Moreover, differently from other plant spatial patterns models, but in agreement with real field observations of vegetation dynamics, we demonstrated that the pattern dynamics always lead to spatially homogeneous vegetation covers without creation of stable Turing patterns. Analytical results show that ring formation is a function of two main components, the plant specific susceptibility to toxic compounds released in the soil by the accumulated litter and the decay rate of these same compounds, depending on environmental conditions. These components act at the same time and their respective intensities can give rise to the different ring structures observed in nature, ranging from slight reductions of biomass in patch centres, to the appearance of marked rings with bare inner zones, as well as the occurrence of ephemeral waves of plant cover. Our results highlight the potential role of plant-soil negative feedback depending on decomposition processes for the development of transient vegetation patterns., (Copyright © 2012 Elsevier Ltd. All rights reserved.)
- Published
- 2012
- Full Text
- View/download PDF
9. Phytotoxicity, not nitrogen immobilization, explains plant litter inhibitory effects: evidence from solid-state 13C NMR spectroscopy.
- Author
-
Bonanomi G, Incerti G, Barile E, Capodilupo M, Antignani V, Mingo A, Lanzotti V, Scala F, and Mazzoleni S
- Subjects
- Biological Transport, Carbon metabolism, Carbon Isotopes analysis, Germination, Magnetic Resonance Spectroscopy methods, Plant Development, Seeds growth & development, Seeds metabolism, Soil chemistry, Nitrogen metabolism, Plant Leaves chemistry, Plant Roots growth & development, Plants chemistry, Seedlings growth & development
- Abstract
Litter decomposition provides nutrients that sustain ecosystem productivity, but litter may also hamper root proliferation. The objectives of this work were to assess the inhibitory effect of litter decomposition on seedling growth and root proliferation; to study the role of nutrient immobilization and phytotoxicity; and to characterize decomposing litter by (13)C NMR spectroscopy. A litter-bag experiment was carried out for 180 d with 16 litter types. Litter inhibitory effects were assessed by two bioassays: seed germination and root proliferation bioassays. Activated carbon (C) and nutrient solutions were used to evaluate the effects of phytotoxic factors and nutrient immobilization. An inhibitory effect was found for all species in the early phase of decomposition, followed by a decrease over time. The addition of activated C to litter removed this inhibition. No evidence of nutrient immobilization was found in the analysis of nitrogen dynamics. NMR revealed consistent chemical changes during decomposition, with a decrease in O-alkyl and an increase in alkyl and methoxyl C. Significant correlations were found among inhibitory effects, the litter decay rate and indices derived from NMR. The results show that it is possible to predict litter inhibitory effects across a range of litter types on the basis of their chemical composition., (© 2011 The Authors. New Phytologist © 2011 New Phytologist Trust.)
- Published
- 2011
- Full Text
- View/download PDF
10. Phytotoxicity dynamics of decaying plant materials.
- Author
-
Bonanomi G, Sicurezza MG, Caporaso S, Esposito A, and Mazzoleni S
- Subjects
- Analysis of Variance, Hydrogen-Ion Concentration, Lepidium sativum growth & development, Plant Development, Plant Roots growth & development, Plants chemistry, Soil, Ecosystem, Plants toxicity
- Abstract
Allelopathic effects of plant litter have been extensively studied, but less attention has been given to the dynamics of phytotoxicity during the decomposition processes. Decomposition experiments were carried out on above- and below-ground plant materials of 25 species of different functional groups (nitrogen fixer, forbs, woody and grasses-sedges) in aerobic and anaerobic conditions. The phytotoxicity of aqueous extracts of decomposing material was assessed by bioassay in 30 d of laboratory and 90 d of litterbag decomposition experiments. Phytotoxicity was widespread with c. 90% of the tested species showing significant phytotoxic releases. Phytotoxicity largely varied between different plant functional groups (nitrogen fixer>forbs=woody>>grasses-sedges) and was higher for leaf compared with root materials. In all species tested during decomposition, phytotoxicity rapidly decreased in aerobic conditions but sharply increased and became stable in anaerobic conditions. The results demonstrate an unexpectedly widespread occurrence of phytotoxicity with clear dynamic patterns during the decomposition processes of plant materials. The ecological consequences of this might have been underestimated.
- Published
- 2006
- Full Text
- View/download PDF
11. Negative Plant-Soil Feedback and Species Coexistence
- Author
-
Bonanomi, Giuliano, Giannino, Francesco, Mazzoleni, Stefano, and Setälä, Heikki
- Published
- 2005
12. Fairy rings caused by a killer fungus foster plant diversity in species-rich grassland
- Author
-
Bonanomi, Giuliano, Mingo, Antonio, Incerti, Guido, Mazzoleni, Stefano, and Allegrezza, Marina
- Published
- 2012
- Full Text
- View/download PDF
13. Assessing occurrence, specificity, and mechanisms of plant facilitation in terrestrial ecosystems
- Author
-
Bonanomi, Giuliano, Incerti, Guido, and Mazzoleni, Stefano
- Published
- 2011
14. Phytotoxicity, not nitrogen immobilization, explains plant litter inhibitory effects: evidence from solid-state ¹³C NMR spectroscopy
- Author
-
Bonanomi, Giuliano, Incerti, Guido, Barile, Elisa, Capodilupo, Manuela, Antignani, Vincenzo, Mingo, Antonio, Lanzotti, Virginia, Scala, Felice, and Mazzoleni, Stefano
- Published
- 2011
15. Decomposition and nutrient dynamics in mixed litter of Mediterranean species
- Author
-
Bonanomi, Giuliano, Incerti, Guido, Antignani, Vincenzo, Capodilupo, Manuela, and Mazzoleni, Stefano
- Published
- 2010
16. Islands of Fertility Induce Co-Occurring Negative and Positive Plant-Soil Feedbacks Promoting Coexistence
- Author
-
Bonanomi, Giuliano, Rietkerk, Max, Dekker, Stefan C., and Mazzoleni, Stefano
- Published
- 2008
- Full Text
- View/download PDF
17. Negative Plant-Soil Feedback and Positive Species Interaction in a Herbaceous Plant Community
- Author
-
Bonanomi, Giuliano, Rietkerk, Max, Dekker, Stefan C., and Mazzoleni, Stefano
- Published
- 2005
- Full Text
- View/download PDF
18. Deteriogenic flora of the Phlegraean Fields Archaeological Park: ecological analysis and management guidelines.
- Author
-
Motti, Riccardo, Bonanomi, Giuliano, and Stinca, Adriano
- Subjects
- *
BOTANY , *WOODY plants , *HERBICIDE application , *PLANTS , *ANTIQUITIES , *VASCULAR plants - Abstract
Biodeterioration, the alteration caused by living organisms, on historical buildings and stone monuments is a well-known problem affecting two-thirds of the world's cultural heritage. The study of the flora growing on wall surface is of particular importance for the assessment of the risk of biodeterioration of stone artifacts by vascular plants, and for maintenance planning. In this study, we investigate how rock type, exposure and inclination of the wall affect the biodeteriogenic flora at 13 sites of the Archaeological Park of the Phlegraean Fields located in the province of Naples, in southern Italy. For each site, we analysed randomly selected square areas with 2 × 2 m size, representing the different vegetation types in terms of vascular plant species cover. The total number of plant species recorded was 129, belonging to 43 families. Erigeron sumatrensis, Sonchus tenerrimus and Parietaria judaica are the most commonly reported species, while Capparis orientalis is the species with the highest average coverage. Substrate type, exposure and surface inclination affect the floristic composition, with the average plant cover significantly higher on vertical surfaces and at western and southern exposure. All the main biodeteriogenic vascular plant species grow on more or less porous lythotype like yellow tufa, conglomerate and bricks. Finally, woody plants eradications methods are proposed by the tree cutting and local application of herbicides, to avoid stump and root sprouting and to minimize the dispersion of chemicals in the surrounding environment. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
19. Water Limitation and Negative Plant-soil Feedback Explain Vegetation Patterns along Rainfall Gradient.
- Author
-
Marasco, Addolorata, Iuorio, Annalisa, Cartenì, Fabrizio, Bonanomi, Giuliano, Giannino, Francesco, and Mazzoleni, Stefano
- Subjects
RAINFALL ,PLANTS ,LIMITING factors (Ecology) ,ECOLOGY ,FLOODS - Abstract
Abstract: The formation of vegetation patterns has been widely studied and discussed over the years and it has been related to two different mechanisms: depletion of water in the center of vegetation patches and production of toxicity by the decomposition of plant residues in soil. In this work we present a spatially explicit model that combines these two processes showing that negative plant-soil feedbacks can explain the development of different vegetation patterns also when water is not a limiting factor. This also demonstrates that the toxicity effects may change the stability properties of the vegetation patterns. [Copyright &y& Elsevier]
- Published
- 2013
- Full Text
- View/download PDF
20. Field evidence for litter and self-DNA inhibitory effects on Alnus glutinosa roots
- Author
-
Giuliano Bonanomi, Maurizio Zotti, Mohamed Idbella, Pasquale Termolino, Veronica De Micco, Stefano Mazzoleni, Bonanomi, Giuliano, Zotti, Maurizio, Idbella, Mohamed, Termolino, Pasquale, De Micco, Veronica, and Mazzoleni, Stefano
- Subjects
epifluorescence microscopy ,decomposition ,plant-soil feedback ,Physiology ,Water ,Plant Science ,Plant ,Plants ,aquatic root ,Plastic ,Alnus ,Lignin ,Plant Leaves ,root anatomy ,Soil ,Plant Leave ,Plastics ,13C-CPMAS NMR ,C : N ratio ,Ecosystem - Abstract
Litter decomposition releases nutrients beneficial to plants but also induces phytotoxicity. Phytotoxicity can result from either labile allelopathic compounds or species specific and caused by conspecific DNA. Aquatic plants in flowing water generally do not suffer phytotoxicity because litter is regularly removed. In stagnant water or in litter packs an impact on root functionality can occur. So far, studies on water plant roots have been carried out in laboratory and never in field conditions. The effect of conspecific vs heterospecific litter and purified DNA were assessed on aquatic roots of the riparian woody species Alnus glutinosa L. using a novel method, using closed and open plastic tubes fixed to single roots in the field with closed tubes analogous to stagnant water. Four fresh and four decomposed litter types were used and analysed on extractable C, cellulose, lignin, N content and using 13 C-CPMAS NMR spectroscopy. Inhibitory effects were observed with fresh litter in closed systems, with a positive correlation with extractable C and negative with lignin and lignin : N ratio. Alnus self-DNA, but not heterologous one, caused acute toxic effects in the closed system. Our results demonstrate the first field-based evidence for self-DNA inhibition as causal factor of negative feedback between plants and substrate.
- Published
- 2022
21. Impact of prescribed burning, mowing and abandonment on a Mediterranean grassland: A 5-year multi-kingdom comparison
- Author
-
Giuliano Bonanomi, Mohamed Idbella, Ahmed M. Abd-ElGawad, Riccardo Motti, Francesca Ippolito, Lucia Santorufo, Paola Adamo, Diana Agrelli, Anna De Marco, Giulia Maisto, Maurizio Zotti, Bonanomi, Giuliano, Idbella, Mohamed, Abd-ElGawad, Ahmed M, Motti, Riccardo, Ippolito, Francesca, Santorufo, Lucia, Adamo, Paola, Agrelli, Diana, De Marco, Anna, Maisto, Giulia, and Zotti, Maurizio
- Subjects
Environmental Engineering ,Bacteria ,Microbiota ,Biodiversity ,Plants ,Poaceae ,Pollution ,Grassland ,Soil ,Long-term experiment, Biodiversity conservation, Soil microbiota, Arthropods, Brachypodium ,Environmental Chemistry ,Animals ,Waste Management and Disposal ,Arthropods ,Ecosystem - Abstract
Mediterranean grasslands are semi-natural, fire-prone, species-rich ecosystems that have been maintained for centuries through a combination of fire, grazing, and mowing. Over the past half century, however, grasslands have faced numerous threats, including the abandonment of traditional agro-pastoral practices. Our hypothesis was that mowing and prescribed burning are management practices potentially effective in counteracting the reduction of plant diversity triggered by land abandonment. However, the long-term effects of such management practices on plant communities and soil microbiota in Mediterranean grassland remain poorly studied. Here, we conducted a 5-year field experiment comparing prescribed fire, vegetation mowing, and abandonment in a fire-prone Mediterranean grassland in southern Italy in order to evaluate the capability of such management strategies to counteract the detrimental impacts of land abandonment on plant diversity and the associated increase of wildfire. We combined vegetation analysis and soil chemical characterization and several microbiota analyses, including microbial biomass and respiration, arthropod community, and high-throughput sequencing of bacterial and eukaryotic rRNA gene markers. Burning and mowing significantly increased plant species richness and diversity compared to abandonment plots, reducing the abundance of perennial tall grasses in favour of short-lived species. Standing litter followed the same trend, being 3.8-fold greater and largely composed of grass remains in the abandoned compared to burnt and mowed plots. In the soil, prescribed burning caused significant increase in pH, a reduction in organic carbon, total N, and cation exchange capacity. Diversity and taxonomic composition of bacterial and fungal microbiota was affected by burning and mowing treatments. Abandonment caused shifts of microbiota towards a fungal-dominated system, composed of late successional fungi of the Basidiomycota. Fast-growing and putative fungal pathogens were more abundant under burnt and mowed treatments. Soil arthropods were influenced by vegetation and microbiota changes, being strongly reduced in mowed plots. Our study demonstrated that grassland abandonment promotes the spread of tall grasses, reducing plant diversity and increasing the risk of wildfire, while prescribed burning and mowing are effective in counteracting such negative effects.
- Published
- 2021
22. Microbiota modulation of allelopathy depends on litter chemistry: Mitigation or exacerbation?
- Author
-
Ahmed M. Abd-ElGawad, Giuliano Bonanomi, Mohamed Idbella, Maurizio Zotti, Stefano Mazzoleni, Bonanomi, Giuliano, Zotti, Maurizio, Idbella, Mohamed, Mazzoleni, Stefano, and Abd-ElGawad, Ahmed M
- Subjects
Plant growth ,Biogeochemical cycle ,Microbial diversity ,Environmental Engineering ,010504 meteorology & atmospheric sciences ,Lignin/N ,010501 environmental sciences ,01 natural sciences ,Botany ,(13)C CPMAS NMR ,Environmental Chemistry ,Bioassay ,Waste Management and Disposal ,Allelopathy ,Ecosystem ,0105 earth and related environmental sciences ,Detritus ,Bacteria ,Chemistry ,Microbiota ,Fungi ,Plant community ,Plant ,Plant litter ,Plants ,Pollution ,Plant Leaves ,Litter chemistry ,Litter ,Plant Leave ,C/N - Abstract
Having a pivotal role in biogeochemical cycles, litter decomposition affects plant growth and regeneration by inducing the release of allelochemicals. The aim of this study was to assess the role of the microbiota in modulating the allelopathic effects of freshly fallen and decomposed leaf litter. To disentangle the chemical and microbial effects, bioassays were carried out on four target plants in sterile and non-sterile conditions. All litter types were characterized by carbon-13 cross polarization magic-angle spinning nuclear magnetic resonance (13C-CPMAS NMR) spectroscopy, and the associated fungal and bacterial microbiota were described by next-generation sequencing. When the litter extract was sterilized, freshly fallen litter severely inhibited the plant root growth, but during decomposition, the allelopathic effect rapidly decreased. Root growth was negatively correlated with extractable carbon and positively correlated with parameters associated with tissue lignification. In non-sterile conditions, the living microbiota modulated the leaf litter allelopathic effects of mitigation (26.5% of cases) and exacerbation (26.6% of cases). The mitigation effect was more frequent and intense in stressful conditions, i.e., highly phytotoxic freshly fallen litter, than in benign environments, i.e., decomposed litter. Finally, we identified specific bacterial and fungal operational taxonomic units (OTUs) that could be involved in the mediation of the litter allelopathic effect. This study highlights the importance of studying allelopathy in both sterile conditions and in the presence of a living microbiota to assess the role of litter chemistry and the potential impact of plant detritus on the agro-ecosystem and natural plant communities.
- Published
- 2021
23. Comparing chemistry and bioactivity of burned versus decomposed plant litter: different pathways but same result?
- Author
-
Francisco Castro Rego, Antonio Saracino, Giuliano Bonanomi, Ahmed M. Abd El-Gawad, Gaspare Cesarano, Virginia Lanzotti, Stefano Mazzoleni, Tushar C. Sarker, Guido Incerti, Luigi Saulino, Bonanomi, Giuliano, Incerti, Guido, Abd El-Gawad, Ahmed M., Cesarano, Gaspare, Sarker, Tushar C., Saulino, Luigi, Lanzotti, Virginia, Saracino, Antonio, Rego, Francisco C., and Mazzoleni, Stefano
- Subjects
0106 biological sciences ,plantâsoil feedback ,plant-soil feedback ,Plant Development ,01 natural sciences ,Char ,soil respiration ,Soil respiration ,Soil ,Dry weight ,13C-CPMAS ,Allelopathy ,Fire ,pyrogenic organic matter ,Bioassay ,Organic matter ,Ecology, Evolution, Behavior and Systematics ,Ecosystem ,chemistry.chemical_classification ,Ecology ,Fungi ,04 agricultural and veterinary sciences ,Plant litter ,Plants ,Carbon ,chemistry ,040103 agronomy & agriculture ,Litter ,0401 agriculture, forestry, and fisheries ,Microcosm ,010606 plant biology & botany - Abstract
Litter burning and biological decomposition are oxidative processes co-occurring in many terrestrial ecosystems, producing organic matter with different chemical properties and differently affecting plant growth and soil microbial activity. We tested the chemical convergence hypothesis, i.e., materials with different initial chemistry converge toward a common profile, with similar biological effects, as the oxidative process advances, for burning and decomposition. We compared the molecular composition, assessed by 13 C NMR, of seven plant litter types either fresh, decomposed for 30, 90, 180 d in a microcosms incubation experiment, or heated at 100°C, 200°C, 300°C, 400°C, 500°C for 30 minutes. We used litter water extracts (5% dry weight) as treatments in bioassays on plant (Lepidium sativum) and fungal (Aspergillus niger) growth, and a washed quartz sand amended with litter (0.5% dw) to assess heterotrophic respiration by flux chamber (i.e., [μg of CO2 released]·[g added litter]-1 ·d-1 ). We observed different molecular variations for materials either burning (i.e., a sharp increase of aromatic C and a decrease of other fractions above 200°C) or decomposing (i.e., early increase of alkyl, methoxyl, and N-alkyl C and decrease of O-alkyl and di-O-alkyl C fractions). Soil respiration and fungal growth decreased with litter age and heating severity, down to 20% relative to fresh litter. Plants were inhibited on fresh litter (on average 13% of the control), but recovered on aged (180 d) and heated (30 min at 500°C) materials, up to 126% and 63% of the control, respectively. Correlation between the intensity of 13 C NMR signals in litter spectra and bioassay results showed that O-alkyl, methoxyl, and aromatic C fractions are crucial to understand organic matter effects, with plant response negatively affected by labile C but positively associated to lignification and pyrogenic C. The pattern of association of soil respiration and fungal growth to these C fractions was essentially opposite to that observed for plant root growth. Our findings suggest a functional convergence of decomposed and burned organic substrates, emerging from the balance between the bioavailability of labile C sources and the presence of recalcitrant and pyrogenic compounds, oppositely affecting different trophic levels.
- Published
- 2018
24. The Influence of Plant Litter on Soil Water Repellency: Insight from 13C NMR Spectroscopy
- Author
-
Gaspare Cesarano, Guido Incerti, Giuliano Bonanomi, Cesarano, Gaspare, Incerti, Guido, and Bonanomi, Giuliano
- Subjects
Genetics and Molecular Biology (all) ,Leaves ,010504 meteorology & atmospheric sciences ,lcsh:Medicine ,Plant Science ,Soil Chemistry ,Spectrum analysis techniques ,01 natural sciences ,Lignin ,Biochemistry ,Soil ,Principal Component Analysi ,lcsh:Science ,reproductive and urinary physiology ,Principal Component Analysis ,Multidisciplinary ,Chemistry ,Plant Biochemistry ,Organic Compounds ,Medicine (all) ,Plant Anatomy ,Chemical Reactions ,Soil chemistry ,04 agricultural and veterinary sciences ,Plant litter ,Plants ,Plant Leaves ,Water ,Carbon-13 Magnetic Resonance Spectroscopy ,Biochemistry, Genetics and Molecular Biology (all) ,Agricultural and Biological Sciences (all) ,Infiltration (hydrology) ,Physical Sciences ,Plant Leave ,Microcosm ,Research Article ,Soil Science ,NMR spectroscopy ,Environmental Chemistry ,Ecosystem ,0105 earth and related environmental sciences ,Decomposition ,Ethanol ,lcsh:R ,fungi ,Organic Chemistry ,Ecology and Environmental Sciences ,Chemical Compounds ,Organisms ,Biology and Life Sciences ,Plant ,Pesticide ,Research and analysis methods ,Agronomy ,Alcohols ,Soil water ,040103 agronomy & agriculture ,0401 agriculture, forestry, and fisheries ,lcsh:Q ,Surface runoff - Abstract
Soil water repellency (SWR, i.e. reduced affinity for water owing to the presence of organic hydrophobic coatings on soil particles) has relevant hydrological implications because low rates of infiltration enhance water runoff, and untargeted diffusion of fertilizers and pesticides. Previous studies investigated the occurrence of SWR in ecosystems with different vegetation cover but did not clarify its relationships with litter biochemical quality. Here, we investigated the capability of different plant litter types to induce SWR by using fresh and decomposed leaf materials from 12 species, to amend a model sandy soil over a year-long microcosm experiment. Water repellency, measured by the Molarity of an Ethanol Droplet (MED) test, was tested for the effects of litter species and age, and compared with litter quality assessed by 13C-CPMAS NMR in solid state and elemental chemical parameters. All litter types were highly water repellent, with MED values of 18% or higher. In contrast, when litter was incorporated into the soil, only undecomposed materials induced SWR, but with a large variability of onset and peak dynamics among litter types. Surprisingly, SWR induced by litter addition was unrelated to the aliphatic fraction of litter. In contrast, lignin-poor but labile C-rich litter, as defined by O-alkyl C and N-alkyl and methoxyl C of 13C-CPMAS NMR spectral regions, respectively, induced a stronger SWR. This study suggests that biochemical quality of plant litter is a major controlling factor of SWR and, by defining litter quality with 13C-CPMAS NMR, our results provide a significant novel contribution towards a full understanding of the relationships between plant litter biochemistry and SWR.
- Published
- 2015
25. Vegetation pattern formation due to interactions between water availability and toxicity in plant-soil feedback
- Author
-
Annalisa Iuorio, Giuliano Bonanomi, Fabrizio Cartenì, Daniel M. Tartakovsky, Francesco Giannino, Stefano Mazzoleni, Addolorata Marasco, Marasco, Addolorata, Annalisa, Iuorio, Carteni', Fabrizio, Bonanomi, Giuliano, Daniel M., Tartakovsky, Mazzoleni, Stefano, and Giannino, Francesco
- Subjects
Climatic Processes ,General Mathematics ,Earth science ,Immunology ,Pattern formation ,Plant Development ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Soil ,Bifurcation analysi ,Negative feedback ,medicine ,Numerical simulations ,Ecosystem ,Computer Simulation ,General Environmental Science ,Pharmacology ,Feedback, Physiological ,Biomass (ecology) ,Ecology ,General Neuroscience ,Water ,Mathematical Concepts ,Plants ,Arid ,Turing pattern ,Computational Theory and Mathematics ,Spatial ecology ,Environmental science ,Spatial variability ,medicine.symptom ,General Agricultural and Biological Sciences ,Vegetation (pathology) - Abstract
Development of a comprehensive theory of the formation of vegetation patterns is still in progress. A prevailing view is to treat water availability as the main causal factor for the emergence of vegetation patterns. While successful in capturing the occurrence of multiple vegetation patterns in arid and semiarid regions, this hypothesis fails to explain the presence of vegetation patterns in humid environments. We explore the rich structure of a toxicity-mediated model of the vegetation pattern formation. This model consists of three PDEs accounting for a dynamic balance between biomass, water, and toxic compounds. Different (ecologically feasible) regions of the model???s parameter space give rise to stable spatial vegetation patterns in Turing and non-Turing regimes. Strong negative feedback gives rise to dynamic spatial patterns that continuously move in space while retaining their stable topology.
- Published
- 2014
26. Self-DNA inhibitory effects: Underlying mechanisms and ecological implications
- Author
-
Fabrizio Cartenì, Stefano Mazzoleni, Christian E. Vincenot, Maria Luisa Chiusano, Guido Incerti, Giuliano Bonanomi, Francesco Giannino, Carteni', Fabrizio, Bonanomi, Giuliano, Giannino, Francesco, Incerti, Guido, Vincenot, Christian Ernest, Chiusano, MARIA LUISA, and Mazzoleni, Stefano
- Subjects
0106 biological sciences ,0301 basic medicine ,Genetic inheritance ,DNA, Plant ,Autotoxicity, extracellular DNA, litter decomposition, plant-soil negative feedback, species interactions ,Plant-soil negative feedback ,Cell ,Plant Science ,Biology ,Inhibitory postsynaptic potential ,01 natural sciences ,Feedback ,Autotoxicity ,Soil ,03 medical and health sciences ,chemistry.chemical_compound ,Extracellular DNA ,medicine ,Species interactions ,Fragmentation (cell biology) ,Inhibitory effect ,Ecosystem ,Ecology ,Litter decomposition ,DNA ,Plant ,Mini-Review ,Plants ,Extracellular dna ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,Plant species ,010606 plant biology & botany - Abstract
DNA is usually known as the molecule that carries the instructions necessary for cell functioning and genetic inheritance. A recent discovery reported a new functional role for extracellular DNA. After fragmentation, either by natural or artificial decomposition, small DNA molecules (between ∼50 and ∼2000 bp) exert a species specific inhibitory effect on individuals of the same species. Evidence shows that such effect occurs for a wide range of organisms, suggesting a general biological process. In this paper we explore the possible molecular mechanisms behind those findings and discuss the ecological implications, specifically those related to plant species coexistence.
- Published
- 2016
- Full Text
- View/download PDF
27. Negative plant soil feedback explaining ring formation in clonal plants
- Author
-
Stefano Mazzoleni, Addolorata Marasco, Fabrizio Cartenì, Max Rietkerk, Giuliano Bonanomi, Francesco Giannino, Carteni', Fabrizio, Marasco, Addolorata, Bonanomi, Giuliano, Mazzoleni, Stefano, M., Rietkerk, and Giannino, Francesco
- Subjects
Statistics and Probability ,Tussock ,Pattern formation ,Soil science ,Biology ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Feedback ,Soil ,Mathematical model ,Vegetation pattern ,Ecosystem ,Computer Simulation ,Biomass ,Plant Physiological Phenomena ,Biomass (ecology) ,Milieukunde ,General Immunology and Microbiology ,Ecology ,Applied Mathematics ,Litter decomposition ,food and beverages ,General Medicine ,Vegetation ,Plants ,Clone Cells ,Modeling and Simulation ,Phytotoxicity ,Spatial ecology ,Litter ,Plant cover ,General Agricultural and Biological Sciences - Abstract
Ring shaped patches of clonal plants have been reported in different environments, but the mechanisms underlying such pattern formation are still poorly explained. Water depletion in the inner tussocks zone has been proposed as a possible cause, although ring patterns have been also observed in ecosystems without limiting water conditions. In this work, a spatially explicit model is presented in order to investigate the role of negative plant-soil feedback as an additional explanation for ring formation. The model describes the dynamics of the plant biomass in the presence of toxicity produced by the decomposition of accumulated litter in the soil. Our model qualitatively reproduces the emergence of ring patterns of a single clonal plant species during colonisation of a bare substrate. The model admits two homogeneous stationary solutions representing bare soil and uniform vegetation cover which depend only on the ratio between the biomass death and growth rates. Moreover, differently from other plant spatial patterns models, but in agreement with real field observations of vegetation dynamics, we demonstrated that the pattern dynamics always lead to spatially homogeneous vegetation covers without creation of stable Turing patterns. Analytical results show that ring formation is a function of two main components, the plant specific susceptibility to toxic compounds released in the soil by the accumulated litter and the decay rate of these same compounds, depending on environmental conditions. These components act at the same time and their respective intensities can give rise to the different ring structures observed in nature, ranging from slight reductions of biomass in patch centres, to the appearance of marked rings with bare inner zones, as well as the occurrence of ephemeral waves of plant cover. Our results highlight the potential role of plant-soil negative feedback depending on decomposition processes for the development of transient vegetation patterns.
- Published
- 2011
28. PHYTOTOXICITY DYNAMICS OF DECAYING PLANT MATERIALS
- Author
-
Maria Grazia Sicurezza, Stefano Mazzoleni, Giuliano Bonanomi, Assunta Esposito, Silvia Caporaso, Bonanomi, G., Sicurezza, M. G., Caporaso, S., Esposito, Assunta, Mazzoleni, S., Bonanomi, Giuliano, Sicurezza, M., Esposito, A., Mazzoleni, Stefano, M. G., Sicurezza, S., Caporaso, and A., Esposito
- Subjects
Physiology ,functional group ,Plant Development ,chemistry.chemical_element ,Plant Science ,Biology ,Plant Roots ,Lepidium sativum ,Soil ,Bioassay ,Ecosystem ,Allelopathy ,Analysis of Variance ,aerobic-anaerobic ,food and beverages ,Hydrogen-Ion Concentration ,Plants ,Plant litter ,leaf-root ,Nitrogen ,Decomposition ,Horticulture ,chemistry ,Agronomy ,bioassay ,allelopathy ,Litter ,Phytotoxicity ,Anaerobic exercise - Abstract
Summary • Allelopathic effects of plant litter have been extensively studied, but less attention has been given to the dynamics of phytotoxicity during the decomposition processes. • Decomposition experiments were carried out on above- and below-ground plant materials of 25 species of different functional groups (nitrogen fixer, forbs, woody and grasses–sedges) in aerobic and anaerobic conditions. The phytotoxicity of aqueous extracts of decomposing material was assessed by bioassay in 30 d of laboratory and 90 d of litterbag decomposition experiments. • Phytotoxicity was widespread with c. 90% of the tested species showing significant phytotoxic releases. Phytotoxicity largely varied between different plant functional groups (nitrogen fixer > forbs = woody >> grasses–sedges) and was higher for leaf compared with root materials. In all species tested during decomposition, phytotoxicity rapidly decreased in aerobic conditions but sharply increased and became stable in anaerobic conditions. • The results demonstrate an unexpectedly widespread occurrence of phytotoxicity with clear dynamic patterns during the decomposition processes of plant materials. The ecological consequences of this might have been underestimated.
- Published
- 2006
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.