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Hypocotyl elongation is an important process in plant growth and development, and is under hormonal regulatory signaling pathways. In our study, exogenous 6-BA significantly inhibited Picea crassifolia hypocotyl elongation more than ethylene in the dark, indicating the existence of different regulatory strategies in conifers, therefore, the P. crassifolia transcriptome was studied to explore the responsive genes and their regulatory pathways for exogenous N6-benzyladenine (6-BA) inhibition of hypocotyl elongation using RNA-Sequencing approach. We present the first transcriptome assembly of P. crassifolia obtained from 24.38 Gb clean data. With lowly-expressed and short contigs excluded, the assembly contains roughly 130,612 unigenes with an N50 length of 1,278 bp. Differential expression analysis found 3,629 differentially expressed genes (DEGs) and found that the differential expression fold of genes was mainly concentrated between 2 and 8 (1 ≤ log2FoldChange ≤ 3). Functional annotation showed that the GO term with the highest number of enriched genes (83 unigenes) was the shoot system development (GO: 0048367) and the KEGG category, plant hormone signal transduction (ko04075), was enriched 30 unigenes. Further analysis revealed that several cytokinin dehydrogenase genes (PcCTD1, PcCTD3 and PcCTD6) catabolized cytokinins, while xyloglucan endotransglucosylase hydrolase gene (PcXTH31), WALLS ARE THIN 1-like gene (PcWAT1-1) and Small auxin-induced gene (PcSAUR15) were strongly repressed thus synergistically completing the inhibition of hypocotyl elongation in P. crassifolia. Besides, PcbHLH149, PcMYB44 and PcERF14 were predicted to be potential core TFs that may form a multi-layered regulatory network with the above proteins for the regulation of hypocotyl growth.

IntroductionDrought stress has drastically hampered the growth and yield of many crops. Therefore, environmentally safe agricultural techniques are needed to mitigate drought stress impact. To this end, foliar spray of nano-nutrients solution to (NNS) alleviate harmful aspects of drought stress.MethodsIn a completely randomized design (CRD) experiment, seedlings were transplanted into pots at 2-3 leaf stage, each filled with loam-compost- organic manure soil (3:1:1). Plants were divided into two groups. (a) control group (b) applied stress group. Plants at vegetative stage were treated with 100% FC for control group and 60% FC for drought group, and these levels were maintained until harvesting. Three treatments of NNS with four levels i.e., 0%, 1%, 3% and 5% were given to all the pots after two weeks of drought stress treatment with a gap of 5 days at vegetative stage.Results and discussionApplication of 1% of nano-nutrient solution displayed an improvement in shoot length, shoot fresh and dry weight, number of leaves and flowers. Leaf chlorophylls and carotenoids and total phenolics contents were found maximum while minimum electrolyte leakage was observed at 3% application compared to control. Further, 1% application of NNS increased the Leaf RWC%, total soluble sugars, flavonoids contents. 5% NNS application exhibited higher total free amino acids with minimum lipid peroxidation rate in leaves of tomato under drought. Antioxidant enzyme activities increased in a concentration dependent manner as gradual increase was observed at 1%, 3% and 5%, respectively. Overall, this study introduced a new insights on using nano-nutrient solutions to maintain natural resources and ensure agricultural sustainability

The plant hormone strigolactones (SLs) play crucial roles in regulating plant development and adaptations to abiotic stresses. Even though the functional roles of SLs have been identified in response to abiotic stresses, the function, and mechanism of SLs are not fully established under alkaline stress. In this study, we identified that exogenous SL could improve alkaline tolerance of soybean seedlings, especially when treated with 0.5 μM SL. The application of SL remarkably reduced the malondialdehyde content, hydrogen peroxide content, and increased the activity of antioxidant enzymes under alkaline stress, suggesting that SL improved the alkaline tolerance by regulating the antioxidant defense capacity. The RNA sequencing data showed 530 special differentially expressed genes under SL treatment and alkaline stress, mainly were associated with antioxidant processes and phenylpropanoid biosynthetic pathway. Some transcription factors were also induced by SL under alkaline stress as confirmed by quantitative real-time PCR (qRT-PCR). Furthermore, SL largely increased the Na content in leaves and decreased Na content in roots under alkaline stress, which suggested that SL might promote the transport of Na from the roots to the leaves of the soybean seedlings. Meanwhile, exogenous SL decreased the content of other elements such as K, Mg, Fe, and Cu in leaves or roots under alkaline stress. Collectively, our results suggested a role of SL in regulating antioxidant defense capacity, specific gene expression, and alterations in ionic contents to alleviate harmful effects of alkaline stress in soybean seedlings.

Water and nutrients scarcity are the two major factors for yield reduction in many wheat-producing areas of the world. Drought stress also restricts micronutrient uptake and thus induces micronutrient deficiency. Zinc is the most important micronutrient for abiotic stress tolerance. A field trial was conducted from 2013 to 2015 to study the effect of foliar application of zinc under normal (100% field capacity) and water deficit (60% field capacity) conditions on quantitative and qualitative aspects of wheat (Triticum aestivum L. var. Faisalabad-08). Three Zn levels (0, 0.1%, and 0.2% by using ZnSO4. 7H2O) were foliar sprayed at the vegetative and reproductive stages of wheat. Obtained results revealed that the growth, yield traits, photosynthetic pigments, and WUE were negatively affected by lower water supply. Zinc foliar application did not affect yield under normal irrigation conditions, however, under water deficit foliar application of 0.2% Zn enhanced grain yield to 25–40%. Zinc foliar spray at both vegetative and reproductive stages increased the chlorophyll contents and WUE. Zinc contents of wheat grain were more when 0.1% Zn was sprayed at the reproductive stage or 0.2% Zn at the vegetative stage. Thus, the foliar application of Zn is a promising short-term approach to improve productivity and grain nutrient content in wheat under water deficit stress. Furthermore, the timing and rate of Zn application could be helpful for the efficient use of water for increasing grain yield.

Hyphae of arbuscular mycorrhizal fungi (AMF) in soil often form complex mycorrhizal networks among roots of same or different plant species for transfer of nutrients from one plant to another. However, the effect of soil nitrogen (N) availability on nutrient transfer between different plant species via common mycorrhizal networks (CMNs) has not been experimentally examined. In order to quantify CMN-mediated nutrient transfer between Leymus chinensis (LC) and Cleistogene squarrosa (CS), two systems, i.e. the CS–LC system (CS and LC were donor and recipient, respectively) and the LC–CS system (LC and CS were donor and recipient, respectively) were established. Stable isotopic 15N was applied to track N transfer between heterospecific seedlings connected by CMNs under three levels of soil N additions: no N addition control (N0), N addition with 7 mg/kg (N1) and N addition with 14 mg/kg (N2). In the CS–LC system, the highest rate of AMF colonization and hyphal length density (HLD) were found at N1. In contrast, maximum AMF colonization rate and HLD were recorded at N2 in LC–CS system. Consequently, plant biomass was significantly higher under N1 and N2 levels in CS–LC and LC–CS systems, respectively. Moreover, in CS–LC system, 15N transfer rate ranged from 16% to 61%, with maximum transfer rate at N1. For LC–CS system, 15N transfer rate was much lower, with the maximum occurring at N0. These findings suggest that CMNs could potentially regulate N transfer from a donor to recipient plant depending upon the strength of individual plant carbon sink.

Salinity stress is a barrier to crop production, quality yield, and sustainable agriculture. The current study investigated the plant growth promotion, biochemical and molecular characterization of bacterial strain Enterobacter cloacae PM23 under salinity stress (i.e., 0, 300, 600, and 900 mM). E. cloacae PM23 showed tolerance of up to 3 M NaCl when subjected to salinity stress. Antibiotic-resistant Iturin C (ItuC) and bio-surfactant-producing genes (sfp and srfAA) were amplified in E. cloacae PM23, indicating its multi-stress resistance potential under biotic and abiotic stresses. Moreover, the upregulation of stress-related genes (APX and SOD) helped to mitigate salinity stress and improved plant growth. Inoculation of E. cloacae PM23 enhanced plant growth, biomass, and photosynthetic pigments under salinity stress. Bacterial strain E. cloacae PM23 showed distinctive salinity tolerance and plant growth-promoting traits such as indole-3-acetic acid (IAA), siderophore, ACC deaminase, and exopolysaccharides production under salinity stress. To alleviate salinity stress, E. cloacae PM23 inoculation enhanced radical scavenging capacity, relative water content, soluble sugars, proteins, total phenolic, and flavonoid content in maize compared to uninoculated (control) plants. Moreover, elevated levels of antioxidant enzymes and osmoprotectants (Free amino acids, glycine betaine, and proline) were noticed in E. cloacae PM23 inoculated plants compared to control plants. The inoculation of E. cloacae PM23 significantly reduced oxidative stress markers under salinity stress. These findings suggest that multi-stress tolerant E. cloacae PM23 could enhance plant growth by mitigating salt stress and provide a baseline and ecofriendly approach to address salinity stress for sustainable agriculture.

The N-ethylmaleimide-sensitive factor attachment protein receptor (SNARE) superfamily, specifically the SNAP25-type proteins and t-SNAREs, have been proposed to regulate cellular processes and plant resistance mechanisms. However, little is known about the role of SNAP25-type proteins in combating abiotic stresses, specifically in wild soybean. In the current study, the isolation and functional characterization of the putative synaptosomal-associated SNAP25-type protein gene GsSNAP33 from wild soybean ( Glycine soja ) were performed. GsSNAP33 has a molecular weight of 33,311 Da and comprises 300 amino acid residues along with Qb-Qc SNARE domains. Multiple sequence alignment revealed the highest similarity of the GsSNAP33 protein to GmSNAP33 (91%), VrSNAP33 (89%), PvSNAP33 (86%) and AtSNAP33 (63%). Phylogenetic studies revealed the abundance of SNAP33 proteins mostly in dicotyledons. Quantitative real-time PCR assays confirmed that GsSNAP33 expression can be induced by salt, alkali, ABA and PEG treatments and that GsSNAP33 is highly expressed in the pods, seeds and roots of Glycine soja . Furthermore, the overexpression of the GsSNAP33 gene in WT Arabidopsis thaliana resulted in increased germination rates, greater root lengths, improved photosynthesis, lower electrolyte leakage, higher biomass production and up-regulated expression levels of various stress-responsive marker genes, including KINI , COR15A , P5Cs , RAB18 , RD29A and COR47 in transgenic lines compared with those in WT lines. Subcellular localization studies revealed that the GsSNAP33-eGFP fusion protein was localized to the plasma membrane, while eGFP was distributed throughout whole cytoplasm of onion epidermal cells. Collectively, our findings suggest that GsSNAP33 , a novel plasma membrane protein gene of Glycine soja , might be involved in improving plant responses to salt and drought stresses in Arabidopsis .

Protein phosphatase 2Cs (PP2Cs) belong to the largest protein phosphatase family in plants. Some members have been described as being negative modulators of plant growth and development, as well as responses to hormones and environmental stimuli. However, little is known about the members of PP2C clade D, which may be involved in the regulation of signaling pathways, especially in response to saline and alkali stresses. Here, we identified 13 PP2C orthologs from the wild soybean (Glycine soja) genome. We examined the sequence characteristics, chromosome locations and duplications, gene structures, and promoter cis-elements of the PP2C clade D genes in Arabidopsis and wild soybean. Our results showed that GsPP2C clade D (GsAPD) genes exhibit more gene duplications than AtPP2C clade D genes. Plant hormone and abiotic stress-responsive elements were identified in the promoter regions of most PP2C genes. Moreover, we investigated their expression patterns in roots, stems, and leaves. Quantitative real-time PCR analyses revealed that the expression levels of representative GsPP2C and AtPP2C clade D genes were significantly influenced by alkali and salt stresses, suggesting that these genes might be associated with or directly involved in the relevant stress signaling pathways. Our results established a foundation for further functional characterization of PP2C clade D genes in the future.

Here we first found that GsERF71, an ERF factor from wild soybean could increase plant alkaline stress tolerance by up-regulating H+-ATPase and by modifing the accumulation of Auxin. Alkaline soils are widely distributed all over the world and greatly limit plant growth and development. In our previous transcriptome analyses, we have identified several ERF (ethylene-responsive factor) genes that responded strongly to bicarbonate stress in the roots of wild soybean G07256 (Glycine soja). In this study, we cloned and functionally characterized one of the genes, GsERF71. When expressed in epidermal cells of onion, GsERF71 localized to the nucleus. It can activate the reporters in yeast cells, and the C-terminus of 170 amino acids is essential for its transactivation activity. Yeast one-hybrid and EMSA assays indicated that GsERF71 specifically binds to the cis-acting elements of the GCC-box, suggesting that GsERF71 may participate in the regulation of transcription of the relevant biotic and abiotic stress-related genes. Furthermore, transgenic Arabidopsis plants overexpressing GsERF71 showed significantly higher tolerance to bicarbonate stress generated by NaHCO3 or KHCO3 than the wild type (WT) plants, i.e., the transgenic plants had greener leaves, longer roots, higher total chlorophyll contents and lower MDA contents. qRT-PCR and rhizosphere acidification assays indicated that the expression level and activity of H+-ATPase (AHA2) were enhanced in the transgenic plants under alkaline stress. Further analysis indicated that the expression of auxin biosynthetic genes and IAA contents were altered to a lower extent in the roots of transgenic plants than WT plants under alkaline stress in a short-term. Together, our data suggest that GsERF71 enhances the tolerance to alkaline stress by up-regulating the expression levels of H+-ATPase and by modifying auxin accumulation in transgenic plants.

In the present study, the nuclear factor-Y subunit B (GmNFYB1) gene, induced by abscisic acid (ABA), 8% polyethylene-glycol (PEG) 6000, and NaCl, was cloned from soybean. GmNFYB1 is located in the ...

This is an original study focus on ERF gene response to alkaline stress. GsERF6 functions as transcription factor and significantly enhanced plant tolerance to bicarbonate (HCO 3 − ) in transgenic Arabidopsis . Alkaline stress is one of the most harmful, but little studied environmental factors, which negatively affects plant growth, development and yield. The cause of alkaline stress is mainly due to the damaging consequence of high concentration of the bicarbonate ion, high-pH, and osmotic shock to plants. The AP2/ERF family genes encode plant-specific transcription factors involved in diverse environmental stresses. However, little is known about their physiological functions, especially in alkaline stress responses. In this study, we functionally characterized a novel ERF subfamily gene, GsERF6 from alkaline-tolerant wild soybean (Glycine soja). In wild soybean, GsERF6 was rapidly induced by NaHCO3 treatment, and its overexpression in Arabidopsis enhanced transgenic plant tolerance to NaHCO3 challenge. Interestingly, GsERF6 transgenic lines also displayed increased tolerance to KHCO3 treatment, but not to high pH stress, implicating that GsERF6 may participate specifically in bicarbonate stress responses. We also found that GsERF6 overexpression up-regulated the transcription levels of bicarbonate-stress-inducible genes such as NADP-ME, H +-Ppase and H +-ATPase, as well as downstream stress-tolerant genes such as RD29A, COR47 and KINI. GsERF6 overexpression and NaHCO3 stress also altered the expression patterns of plant hormone synthesis and hormone-responsive genes. Conjointly, our results suggested that GsERF6 is a positive regulator of plant alkaline stress by increasing bicarbonate ionic resistance specifically, providing a new insight into the regulation of gene expression under alkaline conditions.

Adsorption is an environmental friendly process for removal and/or recovery of heavy metals from wastewater. In recent years, it has been substantiated as a popular technique to treat industrial waste effluents, with significant advantages. In this work, batchwise removal of chromium (III) ions from water by Polyalthia longifolia leaves was studied as a function of adsorbent dose, pH, contact time, and agitation speed. Surface characteristics of the leaves were evaluated by recording IR spectra. The Langmuir, Freundlich, and Temkin adsorption isotherms were employed to explain the sorption process. It was found that one gram of leaves can remove 1.87 mg of trivalent chromium when working at pH 3.0. It has been concluded that Polyalthia longifolia leaves can be used as cost-effective and benign adsorbents for removal of Cr(III) ions from wastewater.

Foliage and tuber fresh matter and chlorophyll content in cvs. Atom alue, Multa, Kufri, Desiree and Patrones were decreased with the increase in soil acidity. However, tuberization was enhanced at pH 5.5 and decreased significantly at pH 4.5 in all cultivars tested. At pH 4.5 the specific mass of all the cultivars was slightly increased. The highest content of reducing sugars and proteins was found at pH 5.5. No definite pattern was observed in total glycoalkaloids content under different acidic range.