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Aquaculture activities can affect water quality and phytoplankton composition. Our study estimated phytoplankton density and composition relating to aquaculture-impacted environmental factors. We analyzed water quality and phytoplankton at 35 sites in a tropical brackish lagoon, including inside aquaculture ponds (integrated farming of fish, shrimp, and crab), at wastewater discharge points, within 300 m of these points, and farther out in the lagoon. Measurements were taken after aquaculture activities started in March and again in July. In both periods, total nitrogen (TN), total phosphorus (TP), chlorophyll-a (Chl-a), and turbidity decreased from the aquaculture ponds to the farther lagoon areas. Principal component analysis showed that nutrients, turbidity, and Chl-a were critical factors in aquaculture ponds, while salinity, temperature, pH, dissolved oxygen (DO), and water depth influenced water quality outside the ponds. Phytoplankton density was higher in July than in March due to aquaculture characteristics. Redundancy analysis indicated that phytoplankton, typical of inorganic, turbid, shallow lakes, was present throughout, whereas marine phytoplankton characterized the open water area (OWA). Marine phytoplankton caused a higher Shannon-Wiener index in July compared to March for OWA. Phytoplankton in aquaculture ponds was dominated by Oscillatoria spp., while Thalassiosira spp. dominated outside the ponds. We also identified indicator genera for two connected lagoons. Although constant water exchange prevented identifying specific indicator phytoplankton groups for aquaculture, this revealed the impact of wastewater from aquaculture ponds on the natural environment in the lagoons. Research on phytoplankton communities is necessary for the sustainable development of aquaculture and environmental management in coastal lagoons., (© 2024. The Author(s), under exclusive licence to Springer Nature Switzerland AG.)

Marine community composition is expected to be relatively stable in a natural environment over time but shift under increasing anthropogenic disturbances. In coastal waters, diatoms and dinoflagellates are two dominant phytoplankton functional groups. In this study, we developed an areal phytoplankton community composition index (APCI) that is based on the area of a scatter plot of dinoflagellate abundance (y-axis) vs diatom abundance (x-axis) using a time window of 1 year, 2 years or 3 years data. An APCI allows an ecological interpretation: it represents the fluctuability of a community composition within a time window and a temporal change between two neighbouring APCIs in a time series represents the stability of the composition. We used a 28-yr time series of monthly data on diatom and dinoflagellate abundance at four stations in Tolo Harbour and Channel (Tolo), Hong Kong to test the hypothesis that temporal changes in APCIs indicate environmental disturbances and to examine the applicability of APCI to indicate changes in nutrient conditions. We calculated the area (APCI) of a scatter plot of monthly data for 1-year, 2-year and 3-year windows, referred to as APCI-1y, -2y and -3y, respectively. The results show that, the fluctuability, is larger in APCI-3y than in APCI-1y, while the stability is stronger as temporal changes between neighbouring APCI-3y are smaller than between APCI-1ys. Temporal trends of APCIs are significantly correlated with those of dissolved inorganic nitrogen and phosphate concentration, which have declined after the implementation of a sewage diversion management plan in 1998. Hence, the APCI method is likely a robust indicator to assess a response of the phytoplankton community composition in a water body to environmental disturbances., Competing Interests: Declaration of competing interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Kedong Yin reports financial support was provided by SML2023SP215, SML2023SP218, SML2023SP238. Kedong Yin reports financial support was provided by NSFC-GD Joint Scheme Project (U1701247) and National Natural Science Foundation of China (U20A20103). Kedong Yin acknowledges data was provided by Hong Kong EPD. We thank Jacob Carstensen for his critical comments which has improved the manuscript. K.Yin acknowledges the support of SML project SML2021SP204., (Copyright © 2024 The Authors. Published by Elsevier B.V. All rights reserved.)

Extreme rainfall from an ex-tropical cyclone caused a major flood event in the Logan River system in southeast Queensland, Australia. This resulted in a significant flood plume, containing nutrients and sediment, being discharged into the adjacent estuary/Bay system. The spatial extent of higher phytoplankton biomass (Chl a) matched the distribution of higher nutrient and sediment concentrations post-flood, suggesting nutrients fuelled phytoplankton production. Particulate nitrogen (PN) constituted over 50 % of total nitrogen in floodwaters, with lower proportions of dissolved inorganic nitrogen (DIN) and phosphate (PO 4 -P). Phytoplankton utilised DIN rapidly but may have maintained growth due to the release of ammonia from suspended sediments and microbial mineralisation of particulate organic nitrogen. Ammonia release from intertidal sediments contributed minimally (0.85 %) to daily phytoplankton nitrogen demands. Our study highlights the need to understand the fate of particulate nitrogen in coastal systems and its role in stimulating phytoplankton growth., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)

According to previous studies, marine heatwaves (MHWs) significantly suppress the phytoplankton chlorophyll-a concentration (Chl a) in tropical oceans. However, pre-MHW Chl a has rarely been considered as a reference value. In this study, the Chl a for the periods preceding and during MHWs events was used to explore the impact of MHWs on Chl a from 1998 to 2022 in the South China Sea (SCS). The Chl a response to MHWs in different regions was further discussed based on the Chl a variation characteristics. The results showed that the Chl a response to MHWs exhibited regional variability. Interestingly, there was a large proportion of positive Chl a anomalies (∼0.55) in the estuary and offshore regions during MHWs; however, Chl a anomalies were mostly negative in the upwelling regions. These different response patterns are related to background conditions, including nutrient concentrations, wind-driven dynamics, and light availability. In upwelling regions, negative Chl a anomalies were primarily due to the weakening of wind speeds, Ekman pumping velocities, and upwelling intensities. In estuarine regions, positive Chl a anomalies were caused by enhanced light availability, whereas in offshore regions, there were attributed to the increased atmospheric wet deposition. These results have improved our understanding of the impact of MHWs on marine ecosystems., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024. Published by Elsevier B.V.)

Ongoing warming is leading to the accelerated shrinkage of glaciers located on Arctic islands. Consequently, the influence of glacial meltwater on phytoplankton primary production in Arctic bays becomes critically important in an era of warming. This work studies the spatiotemporal variation of primary production and chlorophyll a concentration in the bays along the eastern coast of the Novaya Zemlya archipelago. Data were collected during nine cruises performed from July to October (2013-2022). The effect of underwater photosynthetically available radiation (PAR) and nutrients on primary production was assessed separately for bays influenced by glacial meltwater (glacial bays) and those without such influence (non-glacial bays). The median value of water column-integrated primary production (IPP) for all bays was 38 mgC m -2 d -1 , characterizing them as oligotrophic areas. IPP in non-glacial bays was found to be 2.3-fold and 1.4-fold higher than that in glacial bays during summer and autumn, respectively. Underwater PAR was the main abiotic factor determining IPP during the ice-free period. In the entire bays nutrient concentrations were high, exceeding the limiting values for growth and photosynthesis of phytoplankton. It was concluded that the high turbidity from glacial meltwater runoff leads to decreased underwater PAR and, consequently, to a decline in IPP. This study demonstrates that rapid warming could have a negative impact on the productivity of high Arctic bays and their adjacent areas., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)

The responses of Phytoplankton Size Classes (PSCs) to seasons and the distinct phases of coastal upwelling in the northern Indian Ocean is an understudied aspect. This study introduces observations from a monthly time series conducted at three cross-shore transects in the south, central, and north regions between 6 and 13°N along the southwest coast of India in the Southeastern Arabian Sea (SEAS). The data represent pre-upwelling (late April to early May), early upwelling (early to mid-June), peak upwelling (early to mid-August), late upwelling (mid to late September), and post-upwelling (late October to early November) phases. The pre-upwelling had a stratified and nitrate-depleted upper euphotic column due to the intrusion of low saline Bay of Bengal water and solar heating which resulted in a low phytoplankton biomass (chlorophyll-a) contributed by pico-PSC (av. 56.21 ± 21.23 %) followed by nano-PSC (25.25 ± 5.98 %). During the early upwelling, a dominant micro-PSC was prevalent in the coastal stations in the south transect due to the initiation of upwelling there. The peak upwelling was characterised by significant nutrient enrichment causing the dominance of larger micro- and meso-PSCs in the entire coastal region (av. 79.13 ± 39.68 %). Since the late upwelling had less nutrient enrichment, the contribution of nano- and pico-PSCs increased along the south and central transects. By the post-upwelling phase, the dominance of nano-PSC (av. 57.85 ± 11.02 %) and pico-PSC (av. 21.19 ± 11.72 %) was reestablished in the study area due to the end of the nutrient enrichment of upwelling. The subsurface chlorophyll maxima, which was found below 50 m during the pre-upwelling phase, had altered into a thick layer (30 m) and shifted to the upper water column during the upwelling phases when nutrients were higher and solar radiation was lower in the surface waters. A sequential transition of PSCs from pre-upwelling to post-upwelling was evident and it appears that the very high supply of nutrients NO 3 and SiO 4 (>5 μM) during different phases of upwelling favoured the dominance of larger PSCs., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 Elsevier Ltd. All rights reserved.)

Sandusky Bay is the drowned mouth of the Sandusky River in the southwestern portion of Lake Erie. The bay is a popular recreation location and a regional source for drinking water. Like the western basin of Lake Erie, Sandusky Bay is known for being host to summer cyanobacterial harmful algal blooms (cHABs) year after year, fueled by runoff from the predominantly agricultural watershed and internal loading of legacy nutrients (primarily phosphorus). Since at least 2003, Sandusky Bay has harbored a microcystin-producing bloom of Planktothrix agardhii, a species of filamentous cyanobacteria that thrives in low light conditions. Long-term sampling (2003-2018) of Sandusky Bay revealed regular Planktothrix-dominated blooms during the summer months, but in recent years (2019-2022), 16S rRNA gene community profiling revealed that Planktothrix has largely disappeared. From 2017-2022, microcystin decreased well below the World Health Organization (WHO) guidelines. Spring TN:TP ratios increased in years following dam removal, yet there were no statistically significant shifts in other physicochemical variables, such as water temperature and water clarity. With the exception of the high bloom of Planktothrix in 2018, there was no statistical difference in chlorophyll during all other years. Concurrent with the disappearance of Planktothrix, Cyanobium spp. have become the dominant cyanobacterial group. The appearance of other potential toxigenic genera (i.e., Aphanizomenon, Dolichospermum, Cylindrospermopsis) may motivate monitoring of new toxins of concern in Sandusky Bay. Here, we document the regime shift in the cyanobacterial community and propose evidence supporting the hypothesis that the decline in the Planktothrix bloom was linked to the removal of an upstream dam on the Sandusky River., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2024 The Author(s). Published by Elsevier B.V. All rights reserved.)

Long-term ecological time series provide a unique perspective on the emergent properties of ecosystems. In aquatic systems, phytoplankton form the base of the food web and their biomass, measured as the concentration of the photosynthetic pigment chlorophyll a (chl a ), is an indicator of ecosystem quality. We analyzed temporal trends in chl a from the Long-Term Plankton Time Series in Narragansett Bay, Rhode Island, USA, a temperate estuary experiencing long-term warming and changing anthropogenic nutrient inputs. Dynamic linear models were used to impute and model environmental variables (1959 to 2019) and chl a concentrations (1968 to 2019). A long-term chl a decrease was observed with an average decline in the cumulative annual chl a concentration of 49% and a marked decline of 57% in winter-spring bloom magnitude. The long-term decline in chl a concentration was directly and indirectly associated with multiple environmental factors that are impacted by climate change (e.g., warming temperatures, water column stratification, reduced nutrient concentrations) indicating the importance of accounting for regional climate change effects in ecosystem-based management. Analysis of seasonal phenology revealed that the winter-spring bloom occurred earlier, at a rate of 4.9 ± 2.8 d decade -1 . Finally, the high degree of temporal variation in phytoplankton biomass observed in Narragansett Bay appears common among estuaries, coasts, and open oceans. The commonality among these marine ecosystems highlights the need to maintain a robust set of phytoplankton time series in the coming decades to improve signal-to-noise ratios and identify trends in these highly variable environments., Competing Interests: Competing interests statement:The authors declare no competing interest.

Global change is rapidly and fundamentally altering many of the processes regulating the flux of energy throughout ecosystems, and although researchers now understand the effect of temperature on key rates (such as aquatic primary productivity), the theoretical foundation needed to generate forecasts of biomass dynamics and extinction risk remains underdeveloped. We develop new theory that describes the interconnected effects of nutrients and temperature on phytoplankton populations and show that the thermal response of equilibrium biomass (i.e. carrying capacity) always peaks at a lower temperature than for productivity (i.e. growth rate). This mismatch is driven by differences in the thermal responses of growth, death, and per-capita impact on the nutrient pool, making our results highly general and applicable to widely used population models beyond phytoplankton. We further show that non-equilibrium dynamics depend on the pace of environmental change relative to underlying vital rates and that populations respond to variable environments differently at high versus low temperatures due to thermal asymmetries., (© 2024 John Wiley & Sons Ltd.)

Lakes worldwide are affected by multiple stressors, including climate change. This includes massive loading of both nutrients and humic substances to lakes during extreme weather events, which also may disrupt thermal stratification. Since multi-stressor effects vary widely in space and time, their combined ecological impacts remain difficult to predict. Therefore, we combined two consecutive large enclosure experiments with a comprehensive time-series and a broad-scale field survey to unravel the combined effects of storm-induced lake browning, nutrient enrichment and deep mixing on phytoplankton communities, focusing particularly on potentially toxic cyanobacterial blooms. The experimental results revealed that browning counteracted the stimulating effect of nutrients on phytoplankton and caused a shift from phototrophic cyanobacteria and chlorophytes to mixotrophic cryptophytes. Light limitation by browning was identified as the likely mechanism underlying this response. Deep-mixing increased microcystin concentrations in clear nutrient-enriched enclosures, caused by upwelling of a metalimnetic Planktothrix rubescens population. Monitoring data from a 25-year time-series of a eutrophic lake and from 588 northern European lakes corroborate the experimental results: Browning suppresses cyanobacteria in terms of both biovolume and proportion of the total phytoplankton biovolume. Both the experimental and observational results indicated a lower total phosphorus threshold for cyanobacterial bloom development in clearwater lakes (10-20 μg P L -1 ) than in humic lakes (20-30 μg P L -1 ). This finding provides management guidance for lakes receiving more nutrients and humic substances due to more frequent extreme weather events., (© 2023 The Authors. Global Change Biology published by John Wiley & Sons Ltd.)

Nutrient inputs to coastal waters are among the main contributors to phytoplankton blooms that can damage coastal ecosystems. To understand the main causal factors and timing of phytoplankton blooms in Patong Bay, where phytoplankton blooms have frequent occurred for the last decade, variations in phytoplankton abundance and the dissolved inorganic nutrients (nitrogen (DIN), phosphorus (DIP), and dissolved silica (DSi)) were monitored weekly from December 2021 to December 2022. The results revealed that ratios of DIP and DSi to DIN in seawater had increased rapidly in approximately 1-7 days prior to the blooms of Chaetoceros and Eunotogramma. This suggests that the diatom blooms in this area are significantly controlled by an excess of DIP and DSi, in otherwise appropriate environmental conditions. Our findings provide a thorough understanding of the role of excess nutrients on phytoplankton blooms in urban coastal waters, supporting informed coastal management actions., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Ltd. All rights reserved.)

Climate change and increasing nutrient concentrations are two major threats to lake ecosystems. Furthermore, warming is exacerbating the symptoms of eutrophication in freshwaters. Facing both environmental challenges simultaneously is more urgent than ever to preserve and recover water quality and protect the remaining biodiversity. Here, we used long-term observational data to investigate the phytoplankton response to the interaction between temperature and nutrient variations in a deep mesotrophic subalpine lake (L. Iseo, Italy). Despite the existing management programs, we observed a deterioration of the physicochemical status of the lake between 1993 and 2021 in the water column. The average rate of temperature increase was 0.02 °C y -1 across the studied period and accelerated after the last complete mixing events (2005 and 2006), particularly during the last decade (0.08 °C y -1 ). Water warming caused severe impacts on nutrient cycling, reflected by the overall increase in nutrient concentrations. The direct effect of warming was of great importance for phytoplankton, leading to an increase in total biovolume and a loss of diversity and promoting the dominance of Cyanobacteria. Nutrient variations, especially TN and the DSi:TP ratio, considerably structured the community composition. The modification of physicochemical parameters caused by the last complete mixing events led to a remarkable, long-term taxonomical and functional reorganization of the phytoplankton community. This study illustrates that phytoplankton in deep subalpine lakes will experience severe changes in the upcoming years, and that complete mixing events may constitute a threshold for community transformation. Our results stress the importance of using powerful interpretative models with multifaceted long-term datasets to disentangle the pathways by which temperature and nutrients could regulate the phytoplankton community. Our conclusions will help to integrate climate change into mitigation strategies to preserve ecosystem structure and functions., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 The Authors. Published by Elsevier B.V. All rights reserved.)

Effects of climate change and nutrient load caused by human activities on lake phytoplankton blooms have attracted much attention globally. However, their roles and synergistic effects on phytoplankton biomass and community historical succession are not well understood, especially for meso-eutrophic plateau lakes. In this study, a multi-year (1997-2022) monthly dataset including hydro-chemical and meteorological indicators of the meso-eutrophic plateau lake Erhai in China, was used to explore the contributions of climate change and nutrients on phytoplankton biomass variation and community succession. Phytoplankton biomass increased from 1997 to 2006, slowly decreased from 2006 to 2015, then increased again from 2015 to 2022, according to a generalised additive model (GAM). Alongside warming, nitrogen, phosphorus and organic matter are key drivers of long-term interannual variation in phytoplankton biomass and historical succession of the phytoplankton community. The extensive blooms in recent years were strongly associated with both organic matter accumulation and global warming. Phytoplankton biomass in northern and southern districts was greater than in central areas, with Cyanophyta and Pyrrophyta dominating in the north and Chlorophyta prevalent in the south. Since 2015, phytoplankton diversity has increased significantly, and biomass has declined in the southern district but increased markedly in the northern district. Spatial heterogeneity was caused by the spatial distribution of nutrients and the buoyancy regulation capacity of cyanobacteria. The results demonstrate that bloom mitigation responds strongly to nitrogen and phosphorus control in meso-eutrophic lakes, therefore preventing and controlling blooms through nitrogen and phosphorus reduction is still an effective measure. Given the accumulation of organic matter in recent years, synergistic control of organic matter and total nitrogen and phosphorus could effectively reduce the risk of cyanobacterial and dinoflagellate blooms., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Ltd. All rights reserved.)

Many phytoplankton taxa function on multiple trophic levels by combining photosynthesis and ingestion of bacteria, termed mixotrophy. Despite the recognition of mixotrophy as a universal functional trait, we have yet to fully resolve how environmental conditions influence community grazing rates in situ. A microcosm study was used to assess bacterivory by mixotrophic nanoflagellates following nutrient enrichment and light attenuation in a temperate lake. We found contrasting results based on assessment of mixotroph abundance or bacterivory. Despite an interactive effect of nutrient enrichment and light attenuation on mixotroph abundance, significant differences within light treatments were observed only after enrichment with P or N + P. The greatest abundance of mixotrophs across treatments occurred under co-nutrient enrichment with full exposure to irradiance. However, bacterivory by mixotrophic nanoflagellates was greatest under shaded conditions after either N or P enrichment. We suggest that PAR availability dampened the stimulatory effect of nutrient limitation, and bacterivory supplemented a suboptimal photosynthetic environment. In a saturating light regime, the mixotrophic community was less driven to ingest bacteria because photosynthesis was able to satisfy energetic demands. These findings quantify community bacterivory in response to environmental drivers that may characterize future ecosystem conditions and highlight the importance of considering grazing rates in conjunction with abundance of mixotrophic protists., (© 2023 The Authors. Journal of Phycology published by Wiley Periodicals LLC on behalf of Phycological Society of America.)

Phytoplankton is the essential primary producer in fresh surface water ecosystems. However, excessive phytoplankton growth due to eutrophication significantly threatens ecologic, economic, and public health. Therefore, phytoplankton identification and quantification are essential to understanding the productivity and health of freshwater ecosystems as well as the impacts of phytoplankton overgrowth (such as Cyanobacterial blooms) on public health. Microscopy is the gold standard for phytoplankton assessment but is time-consuming, has low throughput, and requires rich experience in phytoplankton morphology. Quantitative polymerase chain reaction (qPCR) is accurate and straightforward with high throughput. In addition, qPCR does not require expertise in phytoplankton morphology. Therefore, qPCR can be a useful alternative for molecular identification and enumeration of phytoplankton. Nonetheless, a comprehensive study is missing which evaluates and compares the feasibility of using qPCR and microscopy to assess phytoplankton in fresh water. This study 1) compared the performance of qPCR and microscopy in identifying and quantifying phytoplankton and 2) evaluated qPCR as a molecular tool to assess phytoplankton and indicate eutrophication. We assessed phytoplankton using both qPCR and microscopy in twelve large freshwater rivers across the United States from early summer to late fall in 2017, 2018, and 2019. qPCR- and microscope-based phytoplankton abundance had a significant positive linear correlation (adjusted R 2  = 0.836, p-value < 0.001). Phytoplankton abundance had limited temporal variation within each sampling season and over the three years studied. The sampling sites in the midcontinent rivers had higher phytoplankton abundance than those in the eastern and western rivers. For instance, the concentration (geometric mean) of Bacillariophyta, Cyanobacteria, Chlorophyta, and Dinoflagellates at the sampling sites in the midcontinent rivers was approximately three times that at the sampling sites in the western rivers and approximately 18 times that at the sampling sites in the eastern rivers. Welch's analysis of variance indicates that phytoplankton abundance at the sampling sites in the midcontinent rivers was significantly higher than that at the sampling sites in the eastern rivers (p-value = 0.013) but was comparable to that at the sampling sites in the western rivers (p-value = 0.095). The higher phytoplankton abundance at the sampling sites in the midcontinent rivers was presumably because these rivers were more eutrophic. Indeed, low phytoplankton abundance occurred in oligotrophic or low trophic sites, whereas eutrophic sites had greater phytoplankton abundance. This study demonstrates that qPCR-based phytoplankton abundance can be a useful numerical indicator of the trophic conditions and water quality in freshwater rivers., Competing Interests: Declaration of Competing Interest All authors claim that no actual or potential conflict of interest exists in relation to this study., (Copyright © 2023 Elsevier Ltd. All rights reserved.)

Phytoplankton size classes (PSCs) are important in marine ecosystems because they organise the food chain and trophic pathways, which determine the overall biological environment. Based on three FORV Sagar Sampada cruises, the current study provides changes in PSCs in the Northeastern Arabian Sea (NEAS; north of 18 N) during different phases of the Northeast Monsoon [NEM (November-February)]. During all three phases of NEM such as early (November), peak (December), and late (February), in-situ chlorophyll-a fractionation data revealed that nanoplankton (2-20 μm) predominated, followed by microplankton (>20 μm) and picoplankton (0.2-2.0 μm). This was primarily because winter convective mixing in the NEAS maintains only a moderate level of nutrients in the surface mixed layer, which is more conducive to the dominance of nanoplankton. Brewin et al. (2012) and Sahay et al. (2017) have satellite-based PSC estimation algorithms; the former was developed for the entire Indian Ocean, while the latter is a modification of the former for the Noctiluca bloom-infested NEAS, with a claim that such blooms are typical of the NEM. When current in-situ PSCs data were compared to algorithm-based NEM data, Brewin et al. (2012) revealed a more realistic PSCs contribution pattern, especially in oceanic waters, with nanoplankton predominating except during early NEM. But the PSCs data from Sahay et al. (2017) showed a high degree of variation from the in-situ data, demonstrating the dominance of pico- and microplankton and a notably small contribution from the nano phytoplankton. The current study showed that Sahay et al. (2017) is inferior to Brewin et al. (2012) at quantifying PSCs in the NEAS without Noctiluca blooms, and provided evidence to show that Noctiluca blooms are not a typical feature of the region during the NEM., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier Ltd. All rights reserved.)

Numerous studies support that biodiversity predict most to ecosystem functioning, but whether other factors display a more significant direct impact on ecosystem functioning than biodiversity remains to be studied. We investigated 398 samples of the phytoplankton phosphorus resource use efficiency (RUE P  = chlorophyll-a concentration/dissolved phosphate) across two seasons in nine plateau lakes in Yunnan Province, China. We identified the main contributors to phytoplankton RUE P and analyzed their potential influences on RUE P at different lake trophic states. The results showed that total nitrogen (TN) contributed the most to RUE P among the nine lakes, whereas community turnover (measured as community dissimilarity) explained the most to RUE P variation across the two seasons. Moreover, TN also influenced RUE P by affecting biodiversity. Species richness (SR), functional attribute diversity (FAD2), and dendrogram-based functional diversity (FDc) were positively correlated with RUE P in both seasons, while evenness was negatively correlated with RUE P at the end of the rainy season. We also found that the effects of biodiversity and turnover on RUE P depended on the lake trophic states. SR and FAD2 were positively correlated with RUE P in all three trophic states. Evenness showed a negative correlation with RUE P at the eutrophic and oligotrophic levels, but a positive correlation at the mesotrophic level. Turnover had a negative influence on RUE P at the eutrophic level, but a positive influence at the mesotrophic and oligotrophic levels. Overall, our results suggested that multiple factors and nutrient states need to be considered when the ecosystem functioning predictors and the biodiversity-ecosystem functioning relationships are investigated., (Copyright © 2022. Published by Elsevier B.V.)

Diffuse terrestrial pollution in bay area has important ecological impacts on coastal ecosystems. This study investigated spatiotemporal changes in N, P, and chlorophyll a (Chla) in the Jiaozhou Bay (JZB) and phytoplankton biomass dynamics under terrestrial nutrients loading. The results from SWAT (Soil and Water Assessment Tool) model demonstrated that the annual average total N (TN) and total P (TP) loading from main rivers were 3626.3 t and 335.6 t, respectively, and were affected by land use type, precipitation, and temperature. Chla value interpreted by remote sensing showed a decrease from nearshore to the far shore. Changes in Chla concentration were usually "dual-cycle" in February and September, but explosive growth of Enteromorpha can cause multiple peaks. TN concentration in the bay was more susceptible to the impact of terrestrial input than TP. Phytoplankton biomass had a stronger correlation with P than with N in JZB. Enteromorpha contributing 4.05% of the phytoplankton biomass played a major role in phytoplankton biomass variability and responded most to nutrients loadings reduction. Under setting 5 m filter strip scenario, the Enteromorpha biomass removal efficiency could reach 35.25%. Furthermore, the findings of this study provide insights for sea-land integration and pollution prevention and control in urbanised bays., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier Ltd. All rights reserved.)

Brown tides caused by the pelagophyte Aureococcus anophagefferens have frequently occurred in the Bohai Sea since 2009 and have led to a dramatic collapse of the local scallop culture. To determine why brown tides occurred in the Bohai Sea rather than in other eutrophic coastal waters of China, phytoplankton communities and nutrients were evaluated and nutrient addition experiments were conducted in the Qinhuangdao coastal area. The concentration of dissolved organic nitrogen (DON) was nearly five times higher than that of dissolved inorganic nitrogen (DIN) during brown tides. High levels of phytoplankton biomass and nutrients were observed in the inshore waters, and the patterns of different nutrients were heterogeneous, which could be due to the uneven distribution of pelagophytes and non-brown tide phytoplankton populations (NBTP). The nutrient enrichment results indicated that the growth of the phytoplankton community was nitrogen-limited. Enrichment of DON, especially urea, could promote the growth of pelagophytes during the development stages of the brown tide. In brief, the results of this study imply that the unique nutrient profile (rich in DON but deficient in DIN) could support the outbreak of brown tides in the inshore waters of Qinhuangdao., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier Inc. All rights reserved.)

The variation of nutrient supply not only leads to the differences in the phytoplankton biomass and primary productivity but also induces the long-term phenotypic evolution of phytoplankton. It is widely accepted that marine phytoplankton follows Bergmann's Rule and becomes smaller with climate warming. Compared with the direct effect of increasing temperature, the indirect effect via nutrient supply is considered to be an important and dominant factor in the reduction of phytoplankton cell size. In this paper, a size-dependent nutrient-phytoplankton model is developed to explore the effects of nutrient supply on the evolutionary dynamics of functional traits associated with phytoplankton size. The ecological reproductive index is introduced to investigate the impacts of input nitrogen concentration and vertical mixing rate on the persistence of phytoplankton and the distribution of cell size. In addition, by applying the adaptive dynamics theory, we study the relationship between nutrient input and the evolutionary dynamics of phytoplankton. The results show that input nitrogen concentration and vertical mixing rate have significant effects on the cell size evolution of phytoplankton. Specifically, cell size tends to increase with the input nutrient concentration, as does the diversity of cell sizes. In addition, a single-peaked relationship between vertical mixing rate and cell size is observed. When the vertical mixing rate is too low or too high, only small individuals are dominant in the water column. When the vertical mixing rate is moderate, large individuals can coexist with small individuals, so the diversity of phytoplankton is elevated. We predict that reduced intensity of nutrient input due to climate warming will lead to a trend towards smaller cell size and will reduce the diversity of phytoplankton.

Nutrient availability, along with light and temperature, drives marine primary production. The ability to migrate vertically, a critical trait of motile phytoplankton, allows species to optimize nutrient uptake, storage, and growth. However, this traditional view discounts the possibility that migration in nutrient-limited waters may be actively modulated by the emergence of energy-storing organelles. Here, we report that bloom-forming raphidophytes harness energy-storing cytoplasmic lipid droplets (LDs) to biomechanically regulate vertical migration in nutrient-limited settings. LDs grow and translocate directionally within the cytoplasm, steering strain-specific shifts in the speed, trajectory, and stability of swimming cells. Nutrient reincorporation restores their swimming traits, mediated by an active reconfiguration of LD size and coordinates. A mathematical model of cell mechanics establishes the mechanistic coupling between intracellular changes and emergent migratory behavior. Amenable to the associated photophysiology, LD-governed behavioral shift highlights an exquisite microbial strategy toward niche expansion and resource optimization in nutrient-limited oceans.

Many coastal ecosystems suffer from eutrophication, algal blooms, and dead zones due to excessive anthropogenic inputs of nitrogen (N) and phosphorus (P). This has led to regional restoration efforts that focus on managing watershed loads of N and P. In Chesapeake Bay, the largest estuary in the United States, dual nutrient reductions of N and P have been pursued since the 1980s. However, it remains unclear whether nutrient limitation - an indicator of restriction of algal growth by supplies of N and P - has changed in the tributaries of Chesapeake Bay following decades of reduction efforts. Toward that end, we analyzed historical data from nutrient-addition bioassay experiments and data from the Chesapeake Bay long-term water-quality monitoring program for six stations in three tidal tributaries (i.e., Patuxent, Potomac, and Choptank Rivers). Classification and regression tree (CART) models were developed using concurrent collections of water-quality parameters for each bioassay monitoring location during 1990-2003, which satisfactorily predicted the bioassay-based measures of nutrient limitation (classification accuracy = 96%). Predictions from the CART models using water-quality monitoring data showed enhanced nutrient limitation over the period of 1985-2020 at four of the six stations, including the downstream station in each of these three tributaries. These results indicate detectable, long-term water-quality improvements in the tidal tributaries. Overall, this research provides a new analytical tool for detecting signs of ecosystem recovery following nutrient reductions. More broadly, the approach can be adapted to other waterbodies with long-term bioassays and water-quality data sets to detect ecosystem recovery., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022. Published by Elsevier Ltd.)

Atmospheric deposition of pollutants decreases pH and increases the nutrient concentration in the surface water. To examine its impact on coastal phytoplankton composition and primary production, monthly atmospheric aerosol samples were mixed with coastal waters in the microcosm experiments. These experiments suggested that the biomass of Bacillariophyceae, Dinophyceae and Chlorophyceae were increased and primary production of the coastal waters increased by 3 to 19% due to the addition of aeolian nutrients. The increase in primary production displayed significant relation with a concentration of sulphate and nitrate in the atmospheric aerosols suggesting that both decreases in pH and fertilization enhanced primary production. The impact of acidification on primary production was found to be 22%, whereas 78% was contributed by the nutrient increase. The atmospheric pollution is increasing rapidly over the northern Indian Ocean since past two decades due to rapid industrialization. Hence, it is suggested that the impact of atmospheric pollution on the coastal ecosystem must be included in the numerical models to predict possible changes in the coastal ecosystem due to climate change., (© 2022. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)

This study demonstrates the vertical and horizontal distribution of nutrients and the seasonal response of nutrients to upwelling in the Arabian Gulf and the Sea of Oman. Thus, monthly data on nitrate, phosphate, and silicate are obtained from the World Ocean Atlas 2018 (WOA), as well as estimates of coastal and curl driven upwelling in both regions. The results of the study indicate that the Sea of Oman's surface and deep waters contained higher concentrations of nutrients than the Arabian Gulf by 80%. In addition, both regions have exhibited a general increase in the vertical distribution of nutrients as the depth increases. Among the aforementioned nutrients, nitrate is found to be a more limiting nutrient for phytoplankton growth than phosphate as the nitrate-to-phosphate ratios (N:P) in surface waters are lower (≤ 4.6:1) than the Redfield ratio (16:1). As for the upwelling, curl-driven upwelling accounts for more than half of the total upwelling in both regions, and both play an important role in nutrient transport. Thus, nutrients are upwelled from the subsurface to the mixed layer at a rate of 50% in the Oman Sea from 140 m to 20 m during the summer and to 40 m during the winter. Similarly, the Arabian Gulf shows 50% transport for nitrates, but 32% for phosphates, from 20 m to 5-10 m. However, due to the abundance of diatoms at the surface of the Arabian Gulf, the surface silicate content is 30% higher than that of the deeper waters., Competing Interests: The authors have declared that no competing interests exist.

Temperature and nutrient supply interactively control phytoplankton growth and productivity, yet the role of these drivers together still has not been determined experimentally over large spatial scales in the oligotrophic ocean. We conducted four microcosm experiments in the tropical and subtropical Atlantic (29°N-27°S) in which surface plankton assemblages were exposed to all combinations of three temperatures (in situ, 3 °C warming and 3 °C cooling) and two nutrient treatments (unamended and enrichment with nitrogen and phosphorus). We found that chlorophyll a concentration and the biomass of picophytoplankton consistently increase in response to nutrient addition, whereas changes in temperature have a smaller and more variable effect. Nutrient enrichment leads to increased picoeukaryote abundance, depressed Prochlorococcus abundance, and increased contribution of small nanophytoplankton to total biomass. Warming and nutrient addition synergistically stimulate light-harvesting capacity, and accordingly the largest biomass response is observed in the warmed, nutrient-enriched treatment at the warmest and least oligotrophic location (12.7°N). While moderate nutrient increases have a much larger impact than varying temperature upon the growth and community structure of tropical phytoplankton, ocean warming may increase their ability to exploit events of enhanced nutrient availability., (© 2022. The Author(s).)

Under most natural marine conditions, phytoplankton cells suspended in the water column are too distantly spaced for direct competition for resources (i.e., overlapping cell boundary layers) to be a routine occurrence. Accordingly, resource-based competitive exclusion should be rare. In contrast, contemporary ecosystem models typically predict an exclusion of larger phytoplankton size classes under low-nutrient conditions, an outcome interpreted as reflecting the competitive advantage of small cells having much higher nutrient 'affinities' than larger cells. Here, we develop mechanistically-focused expressions for steady-state, nutrient-limited phytoplankton growth that are consistent with the discrete, distantly-spaced cells of natural populations. These expressions, when encompassed in a phytoplankton-zooplankton model, yield sustained diversity across all size classes over the full range in nutrient concentrations observed in the ocean. In other words, our model does not exhibit resource-based competitive exclusion between size classes previously associated with size-dependent differences in nutrient 'affinities'., Competing Interests: The authors have declared that no competing interests exist.

Trypsin is best known as a digestive enzyme in animals, but remains unexplored in phytoplankton, the major primary producers in the ocean. Here we report the prevalence of trypsin genes in global ocean phytoplankton and significant influences of environmental nitrogen (N) and phosphorus (P) on their expression. Using CRISPR/Cas9 mediated-knockout and overexpression analyses, we further reveal that a trypsin in Phaeodactylum tricornutum (PtTryp2) functions to repress N acquisition, but its expression decreases under N-deficiency to promote N acquisition. On the contrary, PtTryp2 promotes phosphate uptake per se, and its expression increases under P-deficiency to further reinforce P acquisition. Furthermore, PtTryp2 knockout led to amplitude magnification of the nitrate and phosphate uptake 'seesaw', whereas PtTryp2 overexpression dampened it, linking PtTryp2 to stabilizing N:P stoichiometry. Our data demonstrate that PtTryp2 is a coordinate regulator of N:P stoichiometric homeostasis. The study opens a window for deciphering how phytoplankton adapt to nutrient-variable marine environments., (© 2022. The Author(s).)

Clear vertical variations in phytoplankton community structure are usually observed in deep-water lakes and reservoirs, which is one of the key components of water quality and ecosystem functioning. However, the vertical patterns and ecological drivers of phytoplankton communities in deep-water lakes and reservoirs are still understudied. In this study, we took Qiandao Lake, a deep-water reservoir, as an example to reveal the vertical distribution characteristics of phytoplankton communities and its influencing factors by investigating phytoplankton community structure and the associated water quality index at 12 sites across the whole lake in two seasons (spring and autumn). The results showed that the phytoplankton abundance and chlorophyll a were highest in the surface layer in autumn and then decreased toward deep water, whereas in spring, the maximum value occurred in the subsurface layer (2-5 m), and the dominant phytoplankton species showed obvious vertical stratification characteristics. Specifically, in spring, Cryptomonas and Pseudanabaena dominated the surface and subsurface layers, Cryptomonas dominated in the middle layer, and the abundance of Cyclotella at the bottom layer was significantly higher than that of the other algae genera. The dominant genera in autumn were Pseudanabaena and Aphanizomenon . In the subsurface and middle layers, Leptolyngbya and Pseudanabaena occupied the dominant position, and Leptolyngbya became the only dominant genus. In the bottom layer, Leptolyngbya was the only dominant genus. The key environmental indicators of the water also had obvious vertical changes. The contents of N and P nutrients had a negative correlation with the water depth in spring, whereas the reverse trend was observed in autumn. The correlation analysis showed that the vertical variation in phytoplankton abundance in spring was significantly positively correlated with phosphate concentration, whereas the vertical distribution of phytoplankton abundance in autumn was significantly positively correlated with intensity of light, and the water temperature, NH 4 -N, and total nitrogen were the main factors driving the vertical changes in the dominant genera of phytoplankton community in the two seasons. To summarize, environmental conditions such as water temperature, light, and nutrients had strong effects on the vertical distribution of phytoplankton. In the ecological investigation and quality assessment of deep-water lakes and reservoirs, the vertical distribution characteristics of the phytoplankton community structure and the influence of environmental conditions should be fully considered.+ -N, and total nitrogen were the main factors driving the vertical changes in the dominant genera of phytoplankton community in the two seasons. To summarize, environmental conditions such as water temperature, light, and nutrients had strong effects on the vertical distribution of phytoplankton. In the ecological investigation and quality assessment of deep-water lakes and reservoirs, the vertical distribution characteristics of the phytoplankton community structure and the influence of environmental conditions should be fully considered.

Carbon, nitrogen, and phosphorus are critical macroelements in freshwater systems. Historically, researchers and managers have focused on inorganic forms, based on the premise that the organic pool was not available for direct uptake by phytoplankton. We now know that phytoplankton can tap the organic nutrient pool through a number of mechanisms including direct uptake, enzymatic hydrolysis, mixotrophy, and through symbiotic relationships with microbial communities. In this review, we explore these mechanisms considering current and projected future anthropogenically-driven changes to freshwater systems. In particular, we focus on how naturally- and anthropogenically- derived organic nutrients can influence phytoplankton community structure. We also synthesize knowledge gaps regarding phytoplankton physiology and the potential challenges of nutrient management in an organically dynamic and anthropogenically modified world. Our review provides a basis for exploring these topics and suggests several avenues for future work on the relation between organic nutrients and eutrophication and their ecological implications in freshwater systems., (Copyright © 2022. Published by Elsevier Ltd.)

Phytoplankton assemblage and chlorophyll a along the salinity gradient and oxygen zonation were studied in Ulhas Estuary. Oxic condition exist in euhaline region of the estuary that receives oxygenated coastal waters, while, poly-meso-oligohaline region is hypoxic due to the accumulation of voluminous amount of pollutants from industrial effluents, domestic/sewage and agricultural discharges. Additionally, anthropogenically generated nutrients enhanced phytoplankton biomass (chlorophyll a) and their senescence also led to hypoxia. The dominance of diatoms (>70%) was observed in the euhaline-oxic region, while a tremendous decrease in their contribution (18%) was observed in the oligohaline region. Meso to oligohaline region of the estuary is governed by cyanophytes and chlorophytes due to their affinity towards low salinity and high dissolved inorganic nutrients. Carlson's Trophic State Index (TSI) further substantiated the estuary as eutrophic. Additionally, the study could identify the adaptation of cyanophytes and chlorophytes in oxygen deficient water., (Copyright © 2022 Elsevier Ltd. All rights reserved.)

Phytoplankton carbon (C) and nitrogen (N) stoichiometric homeostasis plays an important role in aquatic ecosystems. Their C:N ratio is a result of cellular metabolic balance, and the relevant regulatory strategy for its plasticity is still unclear. Therefore, a field survey of seven reservoirs in Tianjin, North China, was conducted to understand variations in phytoplankton C:N ratios, and a laboratory culture of Chlamydomonas reinhardtii was performed to understand the relevant regulation strategy for cellular C-N stoichiometric homeostasis under different C and N availability by using transcriptome sequencing and Nano SIMS and C stable isotope analyses. The results indicated that CO 2 limitation had no significant effect on the phytoplankton C:N ratio in either scene, whereas limitation of dissolved inorganic N induced a 35% higher ratio in the field and a 138% higher ratio in the laboratory. Under CO 2 limitation, algal CO 2 -concentrating mechanisms were operated to ensure a C supply, and coupled C-N molecular regulation remained the cellular C:N ratio stable. Under nitrate limitation, differentially expressed gene-regulated intensities increase enormously, and their increasing proportion was comparable to that of the algal C:N ratio; cellular metabolism was reorganized to form a "subhealthy" C-N stoichiometric state with high C:N ratios. In addition, the N transport system had a specific role under CO 2 and nitrate limitations. Our study implies that algal stoichiometric homeostasis depends on the involved limitation element and will help to deepen the understanding of C-N stoichiometric homeostasis in freshwater phytoplankton., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022 Elsevier B.V. All rights reserved.)

Given the increasing eutrophication of water bodies in Africa due to increasing anthropogenic pressures, data are needed to better understand the responses of phytoplankton communities to these changes in tropical lakes. These ecosystems are used by local human populations for multiple purposes, including fish and drinking water production, potentially exposing these populations to health threats if, for example, an increase in toxic cyanobacterial blooms is associated with increasing eutrophication. To test the short-term response of the phytoplankton community to the addition of nutrients (phosphorus and nitrogen, alone or in combination) and Nile tilapia, we developed an in situ mesocosm experiment in a freshwater lagoon located near Abidjan (Ivory Coast). We found that phytoplankton growth (estimated by chlorophyll-a quantification) was highly stimulated when both nitrogen and phosphorus were added, while there was no clear evidence for such colimitation by these two nutrients when considering their concentrations in the lagoon. Phytoplankton growth was accompanied by significant changes in the diversity and composition of this community and did not lead to an increase in the proportions of cyanobacteria. However, the addition of fish to some mesocosms resulted in a drastic decrease in phytoplankton biomass and a dominance of chlorophytes in this community. Finally, these experiments showed that the addition of nitrogen, alone or combined with phosphorus, stimulated microcystin production by cyanobacteria. In addition, no evidence of microcystin accumulation in the fish was found. Taken together, these data allow us to discuss strategies for controlling cyanobacterial blooms in this tropical ecosystem., (© 2022 The Authors. MicrobiologyOpen published by John Wiley & Sons Ltd.)

Phytoplankton have evolved a capability to acquire phosphorus (P) from dissolved organic phosphorus (DOP) since the preferred form, dissolved inorganic phosphate (DIP, or P i ), is often limited in parts of the ocean. Phytic acid (PA) is abundantly synthesized in plants and rich in excreta of animals, potentially enriching the DOP pool in coastal oceans. However, whether and how PA can be used by phytoplankton are poorly understood. Here, we investigated PA utilization and underlying metabolic pathways in the diatom model Phaeodactylum tricornutum . The physiological results showed that P. tricornutum could utilize PA as a sole source of P nutrient to support growth. Meanwhile, the replacement of PA for DIP also caused changes in multiple cellular processes, such as inositol phosphate metabolism, photosynthesis, and signal transduction. These results suggest that PA is bioavailable to P. tricornutum and can directly participate in the metabolic pathways of PA-grown cells. However, our data showed that the utilization of PA was markedly less efficient than that of DIP, and PA-grown cells exhibited P and iron (Fe) nutrient stress signals. Implicated in these findings is the potential of complicated responses of phytoplankton to an ambient DOP species, which calls for more systematic investigation. IMPORTANCE PA is abundant in plants and cannot be digested by nonruminant animals. Hence, it is potentially a significant component of the DOP pool in coastal waters. Despite this potential importance, there is little information about its bioavailability to phytoplankton as a source of P nutrient and the molecular mechanisms involved. In this study, we found that part of PA could be utilized by the diatom P. tricornutum to support growth, and another portion of PA can act as a substrate directly participating in various metabolism pathways and cellular processes. However, our physiological and transcriptomic data show that PA-grown cells still exhibited signs of P stress and potential Fe stress. These results have significant implications in phytoplankton P nutrient ecology and provide a novel insight into multifaceted impacts of DOP utilization on phytoplankton nutrition and metabolism.

Small waterbodies are characterised by a high variability of physicochemical parameters. This has an impact on aquatic macrophytes, which are functional components of aquatic ecosystems that also exert a strong influence on other components of these ecosystems. Therefore, their importance in the classification of reservoirs is unquestionable. Unfortunately, the hydromacrophytes found in nutrient-rich small waterbodies in rural areas have a fairly wide ecological scale and are not suitable for a more accurate assessment of these reservoirs. In addition, indicators derived from the classification of lakes, such as phosphorus, nitrogen, chlorophyll-a, organic matter and trophic state indices, have turned out to be of little use in the assessment of small waterbodies. Only a canonical analysis taking into account both environmental variables and the occurring plant species allows satisfactory results to be obtained. Six small waterbodies located in the rural landscape of the Greater Poland Region were studied over three years. 115 plant taxa, 15 of which are hydromacrophytes, were found in the reservoirs and in their immediate vicinity. Three types of small waterbodies were identified in the CCA assessment: (i) those with high TOC, COD and ammonium nitrogen contents, dominated by pleustophytes, and in a saprotrophic state, (ii) those with high nutrient concentrations, dominated by phytoplankton, with a lack of macrophytes or with nymphaeids present, and in a hypereutrophic state, and (iii) those dominated by submerged macrophytes with low chlorophyll-a content, and in a eutrophic state. Thus, macrophytes turn out to be good indicators which support other variables in the classification of small waterbodies., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 Elsevier B.V. All rights reserved.)

Algal dominance between phytoplankton and epiphyton plays an essential role in predicting shallow lake shifts between clear-water and turbid-water states. However, compared to resources competition, studies on algal life-form shifts between phytoplankton and epiphyton have traditionally received less interest, as few studies have focused on algal communities in both habitats concurrently. We conducted a 4 × 3 factorial design microcosm experiment to explore the mutual feedback relationship between phytoplankton and epiphyton. The initial algal life-form (epiphytic algae and phytoplanktonic algae alone or together) and nutrients enrichment (ambient, enrichment with N and P alone or together) were manipulated. After 28 days of incubation, the results suggested that the nutrient effects on the phytoplankton and epiphyton communities differed among the three different initial algal life-forms. A significant competitive advantage of phytoplankton was found even in treatments containing only epiphytic algae as the initial algal community. The contribution of nutrient enrichment to phytoplankton abundance (13%) was similar to that of epiphyton abundance (11%). In the mutual influence between two algal communities, epiphyton was likely to be a beneficiary as the phytoplankton community contributed 15% of the variance in epiphyton abundance. In addition, significant algal life-form shifts between phytoplankton and epiphyton only occurred in treatments containing one algal life-form, but not in treatments containing both algal life-forms at the beginning of the experiment. Our results emphasized the competitive advantage of phytoplankton in utilizing nutrient resources in the water column of shallow lakes. Moreover, we demonstrated that algal life-form shift was an adaptive behavior closely correlated with environmental variation. These results will provide broader insights to explore algal succession between phytoplankton and epiphyton in shallow lakes. To better understand the mutual influence mechanism between two algal life-forms under different nutrient conditions, research on multiple short time-scales based on algal migration is needed in the future., Competing Interests: Declaration of competing interest All authors declare no conflict of interest., (Copyright © 2021. Published by Elsevier B.V.)

Nutrient pollution of rivers is one of the prime threats facing the aquatic systems. In the present study, water samples (n = 20) were collected from the Karamana river (KR) during the pre-monsoon (PMN) and monsoon (MN) seasons of 2019 to analyze the seasonal variations. The water samples were analyzed for various physico-chemical parameters and to understand the nutrient status of the river. Furthermore, gross primary productivity (GPP), net primary productivity (NPP) and phytoplankton analysis were carried out to assess relationship among productivity variables and phytoplanktons. The study revealed that water quality is better during MN than PMN due to dilution. Among the two seasons, PMN showed relatively higher values for most of parameters like pH, EC, TDS, TA, Cl, NH 4 -N, NO 3 -N, NO 2 -N, Chl-a, GPP and NPP. The correlation among GPP, NPP, nutrients and other water quality parameters were done using SPSS. Phytoplankton of 23 genera belonging to three classes, namely Chlorophyceae (40%), Bacillariophyceae (40%) and Cyanophyceae (20%) have been identified in KR. The various phytoplankton diversity indices and statistical analyses were estimated and their relevance discussed in this paper. The nutrient enrichment in the downstream regions was affected the phytoplanktonic structure and diversity of the river.

Phytoplankton structure and patterns are key components to forecast the net result of the gain and loss process that outline the resilience of the lagoon ecosystem. In order to understand the phytoplankton community structure and its relationship with the environmental variables in the shallow hypersaline Pulicat lagoon, east coast of India, observations were carried out during August 2018-January 2019 covering the three seasons: premonsoon (PrM), monsoon (M), and postmonsoon (PoM). The salinity of the lagoon varied with a minimum of 12.1 for the M and a maximum of 81.65 during the PoM. The clustering analysis performed on the phytoplankton abundance data separated the lagoon into three sectors: north sector (NS), central sector (CS), and south sector (SS). A total of 59 taxa/morphotypes from four taxonomic classes (Bacillariophyceae, Chlorophyceae, Cyanophyceae, and Dinophyceae) were recorded during the study period. The class Bacillariophyceae was dominant in the lagoon both spatially and temporally by 44.06% with Chaetoceros borealis as dominant species. Presence of characteristic species like Dunaliella sp. was observed in the higher salinity, whereas Pediastrum duplex and Scenedesmus sp. were dominant in the freshwater influx areas. The individual-based functional approach allowed grouping these taxa into 11 functional entities based on the derived 4 functional trait values (cell size, trophic regime, mobility, and coloniality). Formation of algal blooms of Protoperidinium sp. (3.3×10 5 ind L -1 ) and Odentella sp. (2.8×10 5 ind L -1 ) was observed in the SS during PoM as a result of reduced water exchange in the lagoon. During the same period, toxin-producing strains like Anabaena sp. and Nostoc sp. of Cyanophyceae were also recorded. Correlating the three sectors of the lake (NS, CS, and SS), it is observed that the physical, chemical, and biological properties of the lake varied continuously depending on the season and freshwater availability. Seasonal nutrient stoichiometry played a significant role in regulating the community structure and distribution pattern of phytoplankton communities of the lagoon., (© 2021. The Author(s), under exclusive licence to Springer-Verlag GmbH Germany, part of Springer Nature.)

Long-term trends in riverine nutrient availability have rarely been linked to both phytoplankton composition and functioning. To explore how the changing availability of N and P affects not only phytoplankton abundance and composition but also the resource use efficiency of N, P, and CO 2 , a 25-year time series of water quality in the lower Han River, Korea, was combined with additional measurements of riverine dissolved organic carbon (DOC) and CO 2 . Despite persistent eutrophication, recent decreases in P relative to N have been steep in the lowest reach, increasing the annual mean mass ratio of N to P (N/P) from 24 (1994-2015) to 65 (2016-2018). While Chl a and cyanobacterial abundance exhibited overall positive and inverse relationships with P concentrations and N/P, respectively, severe harmful algal blooms (HABs) concurred with short-term increases in P and temperature. Microcystis often dominated HABs at low N/P that usually favors N-fixing cyanobacteria such as Anabaena. In the middle and lower reaches, phytoplanktonic P use efficiency was typically lower at low N/P. V-shaped relationships between N/P and CO 2 concentrations, together with longitudinal upward shifts in the inverse relationship between Chl a and CO 2 , implied that eutrophication-enhanced phytoplankton biomass could turn into a significant source of CO 2. after passing a threshold. The combined results suggest that cyanobacterial dominance co-limited by P availability and temperature can lower planktonic P use efficiency, while enhancing riverine CO 2 emissions at low N/P ratios., (Copyright © 2021. Published by Elsevier Ltd.)

Ecological restorations of reservoirs are implemented worldwide; however, minimal successes are reported and understood for warmer African lakes like Swakoppoort Dam, Namibia. The objectives of the study were (a) to establish the effectiveness of the two control measures in reducing cyanobacteria growths in comparison with untreated control areas and (b) to compare the results generated before and after control measures with the reference Von Bach Dam. During Phoslock ® treatment, the average cyanobacteria cells and total phosphate (TP) were 90,521 cells/ml and 0.3 mg/L in the treated area and 55,338 cells/ml and 0.1 mg/L in the control area. During Solar Powered Circulation (SPC) treatment, the average cyanobacteria cells were on average 906,420 cells/ml in the treated areas and 121,891 cells/ml in the control area. The TP on average was 0.3 mg/L during SPC treatment, while during the combined treatment, the average cyanobacteria cells, TP, and total nitrogen (TN) were 18,387,226 cells/ml, 0.27 mg/L, and 2.41 mg/L before and 22,836,511 cells/ml, 0.42 mg/L, and 1.50 mg/L after treatment. This was higher compared to the reference site. PCA triplot indicates no grouping pattern, and the repeated-measures mixed model analyses indicate that treatment had no significant effect on cyanobacteria cells. It was evident that the two control measures were ineffective in reducing cyanobacterial cells. PRACTITIONER POINTS: Key findings of the article: Two phytoplankton control measures were found ineffective to reduce the cyanobacterial cell numbers. High cell numbers of cyanobacteria were recorded at the treatment areas compared to untreated control areas during both treatments. The combined effect of the two control measures was ineffective as more cyanobacterial cells were recorded during the treatment. During control measure treatment, the Swakoppoort Dam was hypertrophic, which could be due to a malfunctioned WWTP upstream. The inefficiency of the control measures could be due to small treatment area, higher nutrients, or treatment period. The implications of the results to water/wastewater practice: The selection of appropriate mitigation measures considering treatment area for dams with high nutrient situated in warmer arid environments. There is a need to understand the trophic relationships, climatic conditions, and the sources of the internal and external nutrients to manage water quality. Focus on point and non-point sources of nutrients as the root causes of the degradation of Swakoppoort Dam water., (© 2021 Water Environment Federation.)

High nutrient loading discharge into the oceans is an evolving threat to the marine biota at large, including the Bay of Bengal (BoB) which receives one of the highest inflows of nutrient fluxes from rivers like the Ganga and the Brahmaputra. Further, the complex riverine and deltaic formations are difficult to be quantified, hence satellite-based observation of chlorophyll and phytoplankton species can add more insight in the nutrient aggregation process. We evaluated the spatial sensitive zones in the BoB in terms of anthropogenic nutrients. Our study shows that coccolithophore population and chlorophyll a concentration can be an active indicator of flood mediated nutrient inflow into the oceans. SST illustrated weaker correlation with phytoplankton species during the monsoon owing to prevalence of cyclonic conditions and high nutrient concentration, however, the relationship is relatively stronger during the pre-monsoon when more stable oligotrophic conditions exist. Higher concentration of diatoms, cyanobacteria and chlorophytes in BOB compared to the Pacific Ocean indicates the ecological sensitivity and the resilience of the Bay of Bengal in terms of nutrient cycling., (Copyright © 2021 Elsevier Ltd. All rights reserved.)

Investigation of nutrients in the water column and phytoplankton pigments in recently formed modern sediments (0-5 cm) was carried out in Cochin estuary. The anthropogenic impacts were assessed using nutrients, nitrate, and phosphate in combination with phytopigments in sediments. The nitrate and phosphate concentration during the study ranged from 0.81 to 42.53 μmol/L and from 0.1 to 5.81 μmol/L, respectively. The mean values of the pigment showed the following order: zeaxanthin (791.53 ng/g) > lutein (347.57 ng/g) > fucoxanthin (335.30 ng/g) > pheophytin (308.84 ng/g) > pheophorbide (172.06 ng/g) > chlorophyll a (161.63 ng/g). The increase in the concentration of zeaxanthin indicated the presence of cyanobacteria, associated with eutrophication. Correlation analysis revealed that water column nutrients have a strong relationship between fucoxanthin and lutein, indicating the coexistence of diatoms and prasinophytes in the sampling sites. The principal component analysis showed positive loading of nutrients concomitant with pigment fucoxanthin and lutein, thus establishing that nutrient input controls the phytoplankton biomass of this estuary., (Copyright © 2021 Elsevier Ltd. All rights reserved.)

Eutrophication is a persistent threat to aquatic ecosystems worldwide. Foundation species, namely those that play a central role in the structuring of communities and functioning of ecosystems, are likely important for the resilience of aquatic ecosystems in the face of disturbance. However, little is known about how interactions among such species influence ecosystem responses to nutrient perturbation. Here, using an array (N = 20) of outdoor experimental pond ecosystems (15,000 L), we manipulated the presence of two foundation species, the macrophyte Myriophyllum spicatum and the mussel Dreissena polymorpha, and quantified ecosystem responses to multiple nutrient disturbances, spread over two years. In the first year, we added five nutrient pulses, ramping up from 10 to 50 μg P/L over a 10-week period from mid-July to mid-October, and in the second year, we added a single large pulse of 50 μg P/L in mid-October. We used automated sondes to measure multiple ecosystems properties at high frequency (15-minute intervals), including phytoplankton and dissolved organic matter fluorescence, and to model whole-ecosystem metabolism. Overall, both foundation species strongly affected the ecosystem responses to nutrient perturbation, and, as expected, initially suppressed the increase in phytoplankton abundance following nutrient additions. However, when both species were present, phytoplankton biomass increased substantially relative to other treatment combinations: non-additivity was evident for multiple ecosystem metrics following the nutrient perturbations in both years but was diminished in the intervening months between our perturbations. Overall, these results demonstrate how interactions between foundation species can cause surprisingly strong deviations from the expected responses of aquatic ecosystems to perturbations such as nutrient additions., (© 2021 by the Ecological Society of America.)

Multiple stressors associated with global change are influencing the phytoplankton taxonomic composition and biomass in plateau lakes, such as higher levels of ultraviolet radiation (UVR, 280-400 nm) and the risk of eutrophication. Although the restrictive effects of high UVR on phytoplankton are generally recognized, the effects will be impacted by the UVR levels of seasonal changes and the nutrient status. In this study, in situ phytoplankton productivity was measured seasonally under full solar radiation and only visible light (photosynthetically active radiation, PAR) conditions in the plateau oligotrophic Lake Fuxian, Southwest China. To determine the single effects of UVR and nutrient enrichment and their combined impact on phytoplankton communities, a mesocosm experiment (1 month) was conducted outdoors during late summer (rainy season). The interactive experiment was designed with two radiation treatments (UVR + PAR and PAR) and four nutrient treatments (raw water, nitrogen addition, phosphorus addition, nitrogen and phosphorus addition). Our results suggested that the response of phytoplankton to UVR depended largely on nutrient availability, which was embodied in the no significant responses of phytoplankton productivity and total biomass to UVR in the oligotrophic raw water from Lake Fuxian, but the positive responses of total biomass to UVR in the nutrient enrichment treatment. Furthermore, the response of phytoplankton to UVR was also taxa dependent. Chlorophytes and dinoflagellates showed positive response to UVR, whereas chrysophytes were quite sensitive to UVR; diatoms had no significant response to UVR under all nutrient conditions, while the response of cyanobacteria to UVR was highly dependent on nutrient status. This study highlights that the increase in nutrient concentrations in oligotrophic lake not only directly promotes the growth of phytoplankton but also combines with low UVR during summer to benefit the growth of eutrophic taxa based on the non-negative effect of UVR on total phytoplankton biomass and the positive effect on eutrophic taxa.

As an indispensable part of the marine ecosystem, phytoplankton are important prey for zooplankton and various marine animals with important commercial value. The influence of seawater warming and eutrophication on phytoplankton communities is well known, but few studies have explained the effects of the interaction between temperature and nutrients on marine phytoplankton. Through meta-analysis and meta-regression, the phytoplankton responses to the effects of nutrient addition and seawater warming were evaluated in this study. Nitrogen (N) addition led to an increase in phytoplankton biomass, while phosphorus (P) had no significant effect on phytoplankton biomass. However, this result may be biased by the uneven distribution of the research area. N limitation is widespread in the areas where these collected studies were conducted, including many parts of North and South Atlantic and West Pacific Oceans. The key limiting nutrient in other areas lacking corresponding experiments, however, remain unclear. The effect of seawater warming was not significant, which indicates the uncertainty about the effect of temperature on phytoplankton. The results of ANOVA show that nutrient addition and seawater warming had similar effects in various marine habitats (coastal regions, estuaries and open seas), while salinity could have caused the difference in the N effects among the three habitats. Furthermore, our results showed that the impact of temperature depends on nutrient conditions, especially N status, which has rarely been considered before. This result demonstrated the importance of evaluating nutrient limitation patterns when studying climate warming. The impact of rising temperatures may need to be reevaluated because N limitation is common., (Copyright © 2021 Elsevier Ltd. All rights reserved.)

Temporal variation of the phytoplankton community and environmental factors were investigated over 8 months: from January 2018 to November 2018 in the Sidi Saad reservoir (central Tunisia): May, June (spring season), July, August (summer season) September, October and November (autumn season), and January (winter season). The relationships between phytoplankton and environmental factors were explored using Canonical Correspondence Analysis (CCA). General linear models (GLMs) were used to predict the phytoplankton abundance. Analysis of variance (ANOVA) was used to test the hypothesis that the abundance of each group of taxa differed between sampling months. The results of chemical analysis of the reservoir showed that the environment was enriched in nitrates, nitrites, ammonium, and orthophosphate, especially in May. Carlson's trophic index using average chemical variables showed that Sidi Saad has a mesotrophic statute. There is temporal phytoplankton succession in the Sidi Saad reservoir. Cyanophyceae dominated over the year except in winter and late autumn (November and January). Chlorophyceae was the dominant group in winter month. The CCA results showed that six environmental factors, orthophosphates (PO 4 3- ) had significant influences on the changes in phytoplankton. GLM showed that PO 2 , TP, TN, SD, and T were the significant predictors of phytoplankton abundance. Phytoplankton composition is largely dominated by the species Microcystis aeruginosa which formed a bloom with excessive abundance (up to 89.76 billion cell l - ) had significant influences on the changes in phytoplankton. GLM showed that PO 4 3- , TP, TN, SD, and T were the significant predictors of phytoplankton abundance. Phytoplankton composition is largely dominated by the species Microcystis aeruginosa which formed a bloom with excessive abundance (up to 89.76 billion cell l -1 in spring). We recommend banning the fishing and their consumption during the period of Microcystis bloom and installing a system of biomonitoring of the levels of toxins in the water.

Nutrient supply regulates the activity of phytoplankton, but the global biogeography of nutrient limitation and co-limitation is poorly understood. Prochlorococcus adapt to local environments by gene gains and losses, and we used genomic changes as an indicator of adaptation to nutrient stress. We collected metagenomes from all major ocean regions as part of the Global Ocean Ship-based Hydrographic Investigations Program (Bio-GO-SHIP) and quantified shifts in genes involved in nitrogen, phosphorus, and iron assimilation. We found regional transitions in stress type and severity as well as widespread co-stress. Prochlorococcus stress genes, bottle experiments, and Earth system model predictions were correlated. We propose that the biogeography of multinutrient stress is stoichiometrically linked by controls on nitrogen fixation. Our omics-based description of phytoplankton resource use provides a nuanced and highly resolved description of nutrient stress in the global ocean., (Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.)

Understanding the limiting factors of phytoplankton growth and competition is crucial for the restoration of aquatic ecosystems. However, the role and synergistic effect of co-varying environmental conditions, such as nutrients and light on the succession of phytoplankton community remains unclear. In this study, a hydrodynamic-ecological modeling approach was developed to explore phytoplankton growth and succession under co-varying environmental conditions (nutrients, total suspended solids (TSS) and variable N:P ratios) in a large shallow lake called Lake Chagan, in Northeast China. A phytoplankton bloom model was nested in the ecological modeling approach. In contrast to the traditonal ecological modeling, competition between phytoplankton species in our study was modeled at both the species/functional group and phenotype levels. Six phytoplankton functional groups, namely diatoms, green algae, Anabaena, Microcystis, Aphanizomenon and Oscillatoria and each of them with three limitation types (i.e., light-limitation, nitrogen-limitation and phosphorus-limitation) were included in the bloom model. Our results demonstrated that the average biomass proportion of the three limitation types (light-limitation, nitrogen-limitation and phosphorus-limitation) in the six phytoplankton function groups accounted for approximately 50%, 37% and 23% of the total phytoplankton biomass, respectively. TSS suppressed the growth of diatoms and green algae, but favored the dominance of cyanobacteria in Lake Chagan, especially in the turbid water phase (TSS ≥ 60 mg/L). In addition, it was reported that the potential of either N-fixing or non-N-fixing cyanobacterial blooming along the gradients of N:P ratios could exist under the influence of the co-environmental factors in the lake. The proportion of non-N-fixing cyanobacteria (i.e., Microcystis and Oscillatoria) exceeded the proportion of N-fixing cyanobacteria (i.e., Anabaena and Aphanizomenon) when the N:P ratios exceeded 20. Non-N-fixing cyanobacteria would become dominant at higher TSS concentrations and lower light intensities in the turbid water. N-fixing cyanobacteria favored lower N:P ratios and higher light intensities in the clearwater phase (where TSS ≤ 60 mg/L). To sustain a good ecological status in the lake, our results suggest that nutrient and TSS levels in the lake should be maintained at or below the thresholds (TN ≤ 1.5 mg/L; TP ≤ 0.1 mg/L; N:P ratios between 15 and 20; and TSS ≤ 60 mg/L). These findings can help improve water quality management practices to restore aquatic ecosystems., Competing Interests: Declaration of Competing Interest The authors declare that they have no conflict of interest., (Copyright © 2021. Published by Elsevier Ltd.)

Understanding the temporal and spatial roles of nutrient limitation on phytoplankton growth is necessary for developing successful management strategies. Chesapeake Bay has well-documented seasonal and spatial variations in nutrient limitation, but it remains unknown whether these patterns of nutrient limitation have changed in response to nutrient management efforts. We analyzed historical data from nutrient bioassay experiments (1992-2002) and data from long-term, fixed-site water-quality monitoring program (1990-2017) to develop empirical approaches for predicting nutrient limitation in the surface waters of the mainstem Bay. Results from classification and regression trees (CART) matched the seasonal and spatial patterns of bioassay-based nutrient limitation in the 1992-2002 period much better than two simpler, non-statistical approaches. An ensemble approach of three selected CART models satisfactorily reproduced the bioassay-based results (classification rate = 99%). This empirical approach can be used to characterize nutrient limitation from long-term water-quality monitoring data on much broader geographic and temporal scales than would be feasible using bioassays, providing a new tool for informing water-quality management. Results from our application of the approach to 21 tidal monitoring stations for the period of 2007-2017 showed modest changes in nutrient limitation patterns, with expanded areas of nitrogen-limitation and contracted areas of nutrient saturation (i.e., not limited by nitrogen or phosphorus). These changes imply that long-term reductions in nitrogen load have led to expanded areas with nutrient-limited phytoplankton growth in the Bay, reflecting long-term water-quality improvements in the context of nutrient enrichment. However, nutrient limitation patterns remain unchanged in the majority of the mainstem, suggesting that nutrient loads should be further reduced to achieve a less nutrient-saturated ecosystem., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2020. Published by Elsevier Ltd.)

The use of discontinuity analysis to assess resilience and alternative regimes of ecosystems has mostly been based on animal size. We so far lack systematic comparisons of size-based and abundance-based approaches necessary for assessing the performance and suitability of the discontinuity analysis across a broader range of organism groups. We used an outdoor mesocosm setup to mimic shallow lake ecosystems with different depths (1.2 m deep, "shallow"; 2.2 m deep, "deep") and trophic status (i.e. low and high nutrient status characteristic of mesotrophic and hypertrophic lakes, respectively). We compared resilience assessments, based on four indicators (cross-scale structure, within-scale structure, aggregation length and gap size) inferred from the size and abundance (biovolume) structure of phytoplankton communities. Our results indicate that resilience assessments based on size and biovolume were largely comparable, which is likely related to similar variability in the size and abundance of phytoplankton as a function of nutrient concentrations. Also, nutrient enrichment rather than water depth influenced resilience, manifested in decreased cross-scale structure and increased aggregation lengths and gap sizes in the high-nutrient treatment. These resilience patterns coupled with decreased phytoplankton diversity and dominance of cyanobacteria in the high nutrient treatment support the use of discontinuity analysis for testing alternative regimes theory. Concordance of size-based and abundance-based results highlights the approach as being potentially robust to infer resilience in organism groups that lack discrete size structures., Competing Interests: Declaration of competing interest The authors declare no conflicts of interest., (Copyright © 2020 The Authors. Published by Elsevier B.V. All rights reserved.)

Spatial variations in summertime phytoplankton community structure from 1991 to 2017 in Daya Bay, China were investigated in this research. The abundance of total phytoplankton and diatoms significantly increased during the study period in all regions of the bay while an increase in dinoflagellates abundance was only significant in the inner and middle bay areas. Pseudo-nitzschia spp. were overwhelmingly dominant followed by Skeletonema costatum. Ceratium furca was the dominant dinoflagellate. Overall, species diversity and evenness indices showed downward trends during the study period. Moreover, the bloom frequency of Scrippsiella trochoidea (associated with red tides) has increased rapidly since the 2000s in the inner bay. These temporal dynamics are largely explained by enhanced dissolved inorganic nitrogen (DIN) concentrations, which increased by 64.58% during 2005-2017 relative to 1991-2004, induced by human activities, along with temperature reductions and salinity increases resulting from open oceanic seawater intrusion., (Copyright © 2020 Elsevier Ltd. All rights reserved.)