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Bryophytes generally have broad geographical ranges that suggest high dispersal ability. The aim of this study was to test hypotheses about dispersal limitation, as indicated by isolation by distance, in four spore-producing species of the moss genus Sphagnum (Sphagnum carolinianum , Sphagnum missouricum , Sphagnum macrophyllum and Sphagnum pylaesii) and to assess whether plants in the southern USA harbour high levels of unique alleles and/or other indicators of exceptional genetic diversity. Isolation by distance was detected in all four species, but regional patterns of genetic structure were very species specific. Northern and southern genotype groups were detected in S. carolinianum and S. missouricum , but in S. pylaesii plants from the Adirondack Mountains of New York were genetically distinct from others to the north and south. One species, S. macrophyllum , exhibited differentiation between northern and southern genetic groups that appeared to reflect more ancient phylogenetic diversification. [ABSTRACT FROM AUTHOR]

Quaternary glaciations have played a major role in shaping the genetic diversity and distribution of plant species. Strong palaeoecological and genetic evidence supports a postglacial recolonization of most plant species to northern Europe from southern, eastern and even western glacial refugia. Although highly controversial, the existence of small in situ glacial refugia in northern Europe has recently gained molecular support. We used genomic analyses to examine the phylogeography of a species that is critical in this debate. Carex scirpoidea Michx subsp. scirpoidea is a dioecious, amphi‐Atlantic arctic–alpine sedge that is widely distributed in North America, but absent from most of Eurasia, apart from three extremely disjunct populations in Norway, all well within the limits of the Weichselian ice sheet. Range‐wide population sampling and variation at 5,307 single nucleotide polymorphisms show that the three Norwegian populations comprise unique evolutionary lineages divergent from Greenland with high between‐population divergence. The Norwegian populations have low within‐population genetic diversity consistent with having experienced genetic bottlenecks in glacial refugia, and host private alleles that probably accumulated in long‐term isolated populations. Demographic analyses support a single, pre‐Weichselian colonization into Norway from East Greenland, and subsequent divergence of the three populations in separate refugia. Other refugial areas are identified in North‐east Greenland, Minnesota/Michigan, Colorado and Alaska. Admixed populations in British Columbia and West Greenland indicate postglacial contact. Taken together, evidence from this study strongly indicates in situ glacial survival in Scandinavia. [ABSTRACT FROM AUTHOR]

We developed novel microsatellite markers for D alechampia scandens L. ( Euphorbiaceae). The target plants belong to a distinct, but undescribed, species in the D . scandens species complex, characterized by small resin-producing glands. In total, 110 alleles over 36 novel markers were identified across 39 individuals from three populations. The number of alleles varied from one to seven, with an average of 3.06 ± 0.26 alleles per locus. The developed markers, along with previously developed ones for a large-glanded D . scandens species, were tested for amplification in 11 additional species of the genus D alechampia. Four markers did not produce any detectable allele in 37 individuals from two populations of the large-glanded species. Average expected heterozygosity across all small- and large-glanded specific loci was 0.36 and 0.15, for the small and large glanded populations, respectively. Cross-species amplification showed that 89% of all markers were successfully amplified in at least one of the 11 other D alechampia species. These microsatellite markers may be useful for detecting undescribed species in the D . scandens species complex, and can be used for comparative analyses of genetic structure, mating system and phylogeography of other D alechampia species. [ABSTRACT FROM AUTHOR]

Aim Disjunctly distributed peatmosses ( Sphagnum) have been found to exhibit little genetic structure over regional and intercontinental scales, mainly caused by high ability for transoceanic long-distance dispersal. Although, most Northern Hemisphere peatmoss species have wide circumboreal/nemoral ranges, little is known about the magnitude and effects of long-distance dispersal and barriers in shaping the genetic structure of such species. We investigate whether high dispersal capacity has caused genetic homogeneity across broad areas of the Northern Hemisphere, or whether barriers act to shape genetic structure across different species with similar distributional ranges. Location Northern Hemisphere. Methods We studied genetic variation and structure in six Sphagnum species using 19 microsatellite loci. Results Four out of six species were genetically structured in similar ways; with mainly one Beringian and one Atlantic group. Overall, both the North American and Eurasian continents seemed to act as a barrier to gene flow in several species. However, the most abrupt breakpoint between genetic groups was found in south-east Alaska. Main conclusions We found evidence for extensive gene flow between regions across the Northern Hemisphere among peatmosses, with oceans seemingly acting as weaker barriers to gene flow than landmasses. Plants from the amphi-Atlantic and amphi-Beringian regions of several species were genetically differentiated. Similar genetic structuring across several species, indicate that spore-producing species do not disperse freely across their entire distributional range, but are likely limited by wind directions, landmass barriers and/or habitat availability. [ABSTRACT FROM AUTHOR]

Spore-producing organisms have small dispersal units enabling them to become widespread across continents. However, barriers to gene flow and cryptic speciation may exist. The common, haploid peatmoss Sphagnum magellanicum occurs in both the Northern and Southern hemisphere, and is commonly used as a model in studies of peatland ecology and peatmoss physiology. Even though it will likely act as a rich source in functional genomics studies in years to come, surprisingly little is known about levels of genetic variability and structuring in this species. Here, we assess for the first time how genetic variation in S. magellanicum is spatially structured across its full distribution range (Northern Hemisphere and South America). The morphologically similar species S. alaskense was included for comparison. In total, 195 plants were genotyped at 15 microsatellite loci. Sequences from two plastid loci (trnG and trnL) were obtained from 30 samples. Our results show that S. alaskense and almost all plants of S. magellanicum in the northern Pacific area are diploids and share the same gene pool. Haploid plants occur in South America, Europe, eastern North America, western North America, and southern Asia, and five genetically differentiated groups with different distribution ranges were found. Our results indicate that S. magellanicum consists of several distinct genetic groups, seemingly with little or no gene flow among them. Noteworthy, the geographical separation of diploids and haploids is strikingly similar to patterns found within other haploid Sphagnum species spanning the Northern Hemisphere. Our results confirm a genetic division between the Beringian and the Atlantic that seems to be a general pattern in Sphagnum taxa. The pattern of strong genetic population structuring throughout the distribution range of morphologically similar plants need to be considered in future functional genomic studies of S. magellanicum. [ABSTRACT FROM AUTHOR]

Level and partitioning of genetic diversity is expected to vary between contrasting habitats, reflecting differences in strength of ecological and evolutionary processes. Therefore, it is necessary to consider processes acting on different time scales when trying to explain diversity patterns in different parts of species' distributions. To explore how historical and contemporary factors jointly may influence patterns of genetic diversity and population differentiation, we compared genetic composition in the perennial herb Arabidopsis lyrata ssp. petraea from the northernmost parts of its distribution range on Iceland to that previously documented in Scandinavia. Leaf tissue and soil were sampled from ten Icelandic populations of A. lyrata. Seedlings were grown from soil samples, and tissue from above-ground and seed bank individuals were genotyped with 21 microsatellite markers. Seed bank density in Icelandic populations was low but not significantly different from that observed in Norwegian populations. While within-population genetic diversity was relatively high on Iceland (HE = 0.35), among-population differentiation was low (FST = 0.10) compared to Norwegian and Swedish populations. Population differentiation was positively associated with geographical distance in both Iceland and Scandinavia, but the strength of this relationship varied between regions. Although topography and a larger distribution range may explain the higher differentiation between mountainous Norwegian relative to lowland populations in Sweden, these factors cannot explain the lower differentiation in Icelandic compared to Swedish populations. We propose that low genetic differentiation among Icelandic populations is not caused by differences in connectivity, but is rather due to large historical effective population sizes. Thus, rather than contemporary processes, historical factors such as survival of Icelandic lineages in northern refugia during the last glacial period may have contributed to the observed pattern. [ABSTRACT FROM AUTHOR]

Many islands are characterized by high biological diversity, and both adaptive and non-adaptive factors have been found to contribute to island richness. Here we study extensive color morph variability in the allopolyploid peat moss Sphagnum palustre on the Azores Islands. By comparing genetic diversity patterns in island and mainland populations we evaluate various hypotheses for the high diversity observed within and between islands. We conclude that the diversity observed cannot be explained by Azores Islands having acted as refugia for morphotypes during Pleistocene glacial periods. Furthermore, high island diversity is not the result of past or ongoing adaptive radiations. Lack of genetic differentiation and free reproduction among morphs growing closely together is not consistent with adaptive differentiation in space or time to changing environmental conditions. We conclude that high island diversity in this species likely reflects phenotypic plasticity, possibly in response to unfavourable microenvironmental conditions. Evolution of phenotypic plasticity is expected in organisms with extensive gene flow, and island diversity in the highly dispersive S. palustre is probably the result of either higher environmental variability in island than mainland populations, or perhaps more likely, selection for increased plasticity in colonizers of variable and stressful island environments. [ABSTRACT FROM AUTHOR]

Aim Arctic plant phylogeography has largely focused on seed plants, and studies on other plant groups are necessary for comparison. Bryophytes have a unique life cycle and can be resistant to extreme conditions, suggesting that their phylogeographic patterns may differ from those of vascular plants. We address the history of the bryophyte genus Cinclidium in order to assess: (1) interspecific relationships, (2) whether its current broad circumarctic distribution results from recent dispersal or has been maintained by long-term local survival under severe glacial conditions, and (3) the origin of its bipolar disjunction. Location Arctic/boreal and bipolar. Methods We sequenced three plastid regions ( atpH -atpI, rpl32- trnL and clpP1.1- clpP1.2) in 129 accessions covering the entire geographical range of all four described species, and inferred phylogenetic relationships and phylogeographical patterns using maximum parsimony, statistical parsimony and Bayesian inference. Results Cinclidium subrotundum was inferred to be monophyletic, in agreement with its distinct morphology and ecology. The three remaining known species (the haploids C. latifolium and C. arcticum, and the diploid C. stygium) shared a number of closely related or identical haplotypes despite their clear morphological differentiation. In all species, identical haplotypes occurred across the entire circumpolar region, including North Atlantic islands. In the bipolar species C. stygium, the haplotype observed in South America (Tierra del Fuego) was identical to one found in Iceland. Three populations originally referred to C. latifolium harboured highly divergent haplotypes and may represent a new species. Main conclusions The extensive haplotype sharing suggests a polyploid origin of C. stygium from C. arcticum, as well as incomplete lineage sorting and/or hybridization between the two haploids C. arcticum and C. latifolium. We interpret the finding of identical haplotypes over vast areas, including isolated islands, as a result of recent dispersal causing the circumpolar distribution of all species in the Northern Hemisphere and the extreme bipolar disjunction in C. stygium. The patterns in the bryophyte genus Cinclidium resemble those previously documented in arctic-alpine and bipolar vascular plants, suggesting that similar mechanisms have shaped species distributions in bryophytes and higher plants. [ABSTRACT FROM AUTHOR]

Background and Aims Anatolia is a biologically diverse, but phylogeographically under-explored region. It is described as either a centre of origin and long-term Pleistocene refugium, or as a centre for genetic amalgamation, fed from distinct neighbouring refugia. These contrasting hypotheses are tested through a global phylogeographic analysis of the arctic–alpine herb, Arabis alpina. Methods Herbarium and field collections were used to sample comprehensively the entire global range, with special focus on Anatolia and Levant. Sequence variation in the chloroplast DNA trnL-trnF region was examined in 483 accessions. A haplotype genealogy was constructed and phylogeographic methods, demographic analysis and divergence time estimations were used to identify the centres of diversity and to infer colonization history. Key Results Fifty-seven haplotypes were recovered, belonging to three haplogroups with non-overlapping distributions in (1) North America/Europe/northern Africa, (2) the Caucuses/Iranian Plateau/Arabian Peninsula and (3) Ethiopia–eastern Africa. All haplogroups occur within Anatolia, and all intermediate haplotypes linking the three haplogroups are endemic to central Anatolia and Levant, where haplotypic and nucleotide diversities exceeded all other regions. The local pattern of haplotype distribution strongly resembles the global pattern, and the haplotypes began to diverge approx. 2·7 Mya, coinciding with the climate cooling of the early Middle Pleistocene. Conclusions The phylogeographic structure of Arabis alpina is consistent with Anatolia being the cradle of origin for global genetic diversification. The highly structured landscape in combination with the Pleistocene climate fluctuations has created a network of mountain refugia and the accumulation of spatially arranged genotypes. This local Pleistocene population history has subsequently left a genetic imprint at the global scale, through four range expansions from the Anatolian diversity centre into Europe, the Near East, Arabia and Africa. Hence this study also illustrates the importance of sampling and scaling effects when translating global from local diversity patterns during phylogeographic analyses. [ABSTRACT FROM AUTHOR]