1. Pseudoruegeria insulae sp. nov., isolated from a tidal flat
- Author
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Ji-Min Park, Jung-Hoon Yoon, and Sooyeon Park
- Subjects
DNA, Bacterial ,0106 biological sciences ,0301 basic medicine ,food.ingredient ,Ubiquinone ,Biology ,010603 evolutionary biology ,01 natural sciences ,Microbiology ,03 medical and health sciences ,Glycolipid ,food ,Genus ,RNA, Ribosomal, 16S ,Republic of Korea ,Seawater ,Haliotis ,Rhodobacteraceae ,Gene ,Phospholipids ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,chemistry.chemical_classification ,Base Composition ,Strain (chemistry) ,Phylogenetic tree ,Fatty Acids ,Nucleic Acid Hybridization ,Fatty acid ,Phosphatidylglycerols ,Sequence Analysis, DNA ,General Medicine ,16S ribosomal RNA ,Bacterial Typing Techniques ,030104 developmental biology ,chemistry - Abstract
A Gram-stain-negative, aerobic, non-motile and ovoid or rod-shaped bacterial strain, designated BPTF-M20T, was isolated from tidal flat sediment in the Yellow Sea, Republic of Korea. Strain BPTF-M20T grew optimally at 30 °C, at pH 7.0–8.0 and in the presence of 2.0–3.0 % (w/v) NaCl. A neighbour-joining phylogenetic tree of 16S rRNA gene sequences showed that strain BPTF-M20T fell within the clade comprising the type strains of Pseudoruegeria species. Strain BPTF-M20T exhibited 16S rRNA gene sequence similarity values of 97.4–98.3 % to the type strains of Pseudoruegeria haliotis , Pseudoruegeria lutimaris , ‘ Pseudoruegeria litorisediminis’ and Pseudoruegeria sabulilitoris and 96.4–96.9 % to the type strains of the other Pseudoruegeria species. Strain BPTF-M20T contained Q-10 as the predominant ubiquinone and C18 : 1 ω7c as the major fatty acid. The major polar lipids detected in strain BPTF-M20T were phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol, one unidentified aminolipid and one unidentified glycolipid. The DNA G+C content of strain BPTF-M20T was 63.2 mol%. Mean DNA–DNA relatedness values of strain BPTF-M20T with the type strains of P. haliotis , P. lutimaris , P. sabulilitoris and ‘P. litorisediminis’ were 18–27 %. Differential phenotypic properties, together with the phylogenetic and genetic data, revealed that strain BPTF-M20T was separated from recognized Pseudoruegeria species. On the basis of the data presented here, strain BPTF-M20T is considered to represent a novel species of the genus Pseudoruegeria , for which the name Pseudoruegeria insulae sp. nov. is proposed. The type strain is BPTF-M20T (=KACC 19614T=KCTC 62422T=NBRC 113188T).
- Published
- 2018