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Plants are affected by complex genome×environment×management interactions which determine phenotypic plasticity as a result of the variability of genetic components. Whereas great advances have been made in the cost-efficient and high-throughput analyses of genetic information and non-invasive phenotyping, the large-scale analyses of the underlying physiological mechanisms lag behind. The external phenotype is determined by the sum of the complex interactions of metabolic pathways and intracellular regulatory networks that is reflected in an internal, physiological, and biochemical phenotype. These various scales of dynamic physiological responses need to be considered, and genotyping and external phenotyping should be linked to the physiology at the cellular and tissue level. A highdimensional physiological phenotyping across scales is needed that integrates the precise characterization of the internal phenotype into high-throughput phenotyping of whole plants and canopies. By this means, complex traits can be broken down into individual components of physiological traits. Since the higher resolution of physiological phenotyping by 'wet chemistry' is inherently limited in throughput, high-throughput non-invasive phenotyping needs to be validated and verified across scales to be used as proxy for the underlying processes. Armed with this interdisciplinary and multidimensional phenomics approach, plant physiology, non-invasive phenotyping, and functional genomics will complement each other, ultimately enabling the in silico assessment of responses under defined environments with advanced crop models. This will allow generation of robust physiological predictors also for complex traits to bridge the knowledge gap between genotype and phenotype for applications in breeding, precision farming, and basic research. [ABSTRACT FROM AUTHOR]

A letter is presented that proposes a rapid screening method for the parallel determination of various phytohormones such as abscisic acid (ABA) and indole-3-acetic acid (IAA), and phytoalexins like camalexin and scopoleptin in various plant species, notably "Arabidopsis thaliana" and "Nicotiana tabacum." It claims that this method can increase the process of physiological phenotyping in plants, thus helping researchers to develop effective strategies for the protection of agricultural crops.

The article offers information on the European Field Phenotyping Workshop held at Copenhagen, Denmark on September 2014. Topics discussed include the development of field phenotyping toolbox, agriculture and genomic breeding as future challenges, and field phenotyping methods result use as a basis to improve and develop techniques in phenotyping platforms.