38,233 results on '"Stereoisomerism"'
Search Results
2. General Synthetic Approach to Diverse Taxane Cores
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Perea, Melecio A, Wang, Brian, Wyler, Benjamin C, Ham, Jin Su, O’Connor, Nicholas R, Nagasawa, Shota, Kimura, Yuto, Manske, Carolin, Scherübl, Maximilian, Nguyen, Johny M, and Sarpong, Richmond
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Organic Chemistry ,Chemical Sciences ,Stereoisomerism ,Taxoids ,Monoterpenes ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Chemical synthesis of natural products is typically inspired by the structure and function of a target molecule. When both factors are of interest, such as in the case of taxane diterpenoids, a synthesis can both serve as a platform for synthetic strategy development and enable new biological exploration. Guided by this paradigm, we present here a unified enantiospecific approach to diverse taxane cores from the feedstock monoterpenoid (S)-carvone. Key to the success of our approach was the use of a skeletal remodeling strategy which began with the divergent reorganization and convergent coupling of two carvone-derived fragments, facilitated by Pd-catalyzed C-C bond cleavage tactics. This coupling was followed by additional restructuring using a Sm(II)-mediated rearrangement and a bioinspired, visible-light induced, transannular [2 + 2] photocycloaddition. Overall, this divergent monoterpenoid remodeling/convergent fragment coupling approach to complex diterpenoid synthesis provides access to structurally disparate taxane cores which have set the stage for the preparation of a wide range of taxanes.
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- 2022
3. Unusual Enantiodivergence in Chiral Brønsted Acid‐Catalyzed Asymmetric Allylation with β‐Alkenyl Allylic Boronates
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Gao, Shang, Duan, Meng, Andreola, Laura R, Yu, Peiyuan, Wheeler, Steven E, Houk, Kendall N, and Chen, Ming
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Alcohols ,Aldehydes ,Catalysis ,Stereoisomerism ,Boronates ,C-H center dot center dot center dot pi Interactions ,Chiral Phosphoric Acids ,Enantiodivergence ,Organocatalysis ,C−H⋅⋅⋅π Interactions ,Chemical Sciences ,Organic Chemistry - Abstract
We report herein a rare example of enantiodivergent aldehyde addition with β-alkenyl allylic boronates via chiral Brønsted acid catalysis. 2,6-Di-9-anthracenyl-substituted chiral phosphoric acid-catalyzed asymmetric allylation using β-vinyl substituted allylic boronate gave alcohols with R absolute configuration. The sense of asymmetric induction of the catalyst in these reactions is opposite to those in prior reports. Moreover, in the presence of the same acid catalyst, the reactions with β-2-propenyl substituted allylic boronate generated homoallylic alcohol products with S absolute configuration. Unusual substrate-catalyst C-H⋅⋅⋅π interactions in the favoured reaction transition state were identified as the origins of observed enantiodivergence through DFT computational studies.
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- 2022
4. One-Pot Assembly and Synthetic Applications of Geminal Acyl/Alkoxy Tetrasubstituted Allenes
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Bergstrom, Benjamin D, Toth-Williams, Garrett, Lo, Anna, Toman, Jeffrey W, Fettinger, James C, and Shaw, Jared T
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Organic Chemistry ,Chemical Sciences ,Alcohols ,Alkadienes ,Catalysis ,Stereoisomerism ,Medicinal and Biomolecular Chemistry ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
Polysubstituted allenes are useful synthetic intermediates in many applications, offering structural complexity, modularity, and their axial chirality in further transformations. While acyl and alkoxy-substituted allenes are known, there are currently few examples of allenes containing both functionalities and no reports of geminally substituted acyl/alkoxy allenes being isolated and characterized. Herein, we report the synthesis of tetrasubstituted allenes featuring a novel geminal acyl/alkoxy substitution. These unique "push-pull" allenes are bench-stable and exhibit interesting reactivity in several applications.
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- 2022
5. Bioinspired Asymmetric Total Synthesis of Emeriones A–C**
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Jänner, Sven, Isak, Daniel, Li, Yuli, Houk, Kendall N, and Miller, Aubry K
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Cyclization ,Oxidation-Reduction ,Stereoisomerism ,Biomimetic Synthesis ,Cascade Reactions ,Electrocyclizations ,Polyketides ,Total Synthesis ,Chemical Sciences ,Organic Chemistry - Abstract
We report asymmetric bioinspired total syntheses of the fungal metabolites emeriones A-C via stereoselective oxidations of two bicyclo[4.2.0]octadiene diastereomers. The central bicyclic scaffolds are prepared in an 8π/6π electrocyclization cascade of a stereodefined pentaene, which contains the fully assembled side chains of the emeriones. The anti-aldol side chain is made using a Paterson-aldol addition, and the epoxide of the dioxabicyclo[3.1.0]hexane side chain via ring-closure onto an oxidized acetal. Our work has enabled the structural revision of emerione C, and resulted in the synthesis of a "missing" family member, which we call emerione D. DFT calculations identified two methyl groups that govern torquoselectivity in the 8π/6π cascade.
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- 2022
6. Engineered P450 Atom-Transfer Radical Cyclases are Bifunctional Biocatalysts: Reaction Mechanism and Origin of Enantioselectivity
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Fu, Yue, Chen, Heyu, Fu, Wenzhen, Garcia-Borràs, Marc, Yang, Yang, and Liu, Peng
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Medicinal and Biomolecular Chemistry ,Organic Chemistry ,Chemical Sciences ,Theoretical and Computational Chemistry ,Bioengineering ,Biocatalysis ,Cytochrome P-450 Enzyme System ,Heme ,Molecular Dynamics Simulation ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
New-to-nature radical biocatalysis has recently emerged as a powerful strategy to tame fleeting open-shell intermediates for stereoselective transformations. In 2021, we introduced a novel metalloredox biocatalysis strategy that leverages the innate redox properties of the heme cofactor of P450 enzymes, furnishing new-to-nature atom-transfer radical cyclases (ATRCases) with excellent activity and stereoselectivity. Herein, we report a combined computational and experimental study to shed light on the mechanism and origins of enantioselectivity for this system. Molecular dynamics and quantum mechanics/molecular mechanics (QM/MM) calculations revealed an unexpected role of the key beneficial mutation I263Q. The glutamine residue serves as an essential hydrogen bond donor that engages with the carbonyl moiety of the substrate to promote bromine atom abstraction and enhance the enantioselectivity of radical cyclization. Therefore, the evolved ATRCase is a bifunctional biocatalyst, wherein the heme cofactor enables atom-transfer radical biocatalysis, while the hydrogen bond donor residue further enhances the activity and enantioselectivity. Unlike many enzymatic stereocontrol rationales based on a rigid substrate binding model, our computations demonstrate a high degree of rotational flexibility of the allyl moiety in an enzyme-substrate complex and succeeding intermediates. Therefore, the enantioselectivity is controlled by the radical cyclization transition states rather than the substrate orientation in ground-state complexes in the preceding steps. During radical cyclization, anchoring effects of the Q263 residue and steric interactions with the heme cofactor concurrently control the π-facial selectivity, allowing for highly enantioselective C-C bond formation. Our computational findings are corroborated by experiments with ATRCase mutants generated from site-directed mutagenesis.
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- 2022
7. Impact of Host Flexibility on Selectivity in a Supramolecular Host-Catalyzed Enantioselective aza-Darzens Reaction
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Bierschenk, Stephen M, Pan, Judy Y, Settineri, Nicholas S, Warzok, Ulrike, Bergman, Robert G, Raymond, Kenneth N, and Toste, F Dean
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Macromolecular and Materials Chemistry ,Organic Chemistry ,Chemical Sciences ,Catalysis ,Gallium ,Indium ,Molecular Structure ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
A highly enantioselective aza-Darzens reaction (up to 99% ee) catalyzed by an enantiopure supramolecular host has been discovered. To understand the role of host structure on reaction outcome, nine new gallium(III)-based enantiopure supramolecular assemblies were prepared via substitution of the external chiral amide. Despite the distal nature of the substitution in these catalysts, changes in enantioselectivity (61 to 90% ee) in the aziridine product were observed. The enantioselectivities were correlated to the flexibility of the supramolecular host scaffold as measured by the kinetics of exchange of a model cationic guest. This correlation led to the development of a best-in-class catalyst by substituting the gallium(III)-based host with one based on indium(III), which generated the most flexible and selective catalyst.
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- 2022
8. Synthesis of Pleuromutilin
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Foy, Nicholas J and Pronin, Sergey V
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Organic Chemistry ,Chemical Sciences ,Cyclization ,Diterpenes ,Polycyclic Compounds ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Synthesis of a potent inhibitor of bacterial protein synthesis, pleuromutilin, is described. Assembly of the critical cyclooctane fragment relies on an oxidative ring-expansion, and complete stereochemical relay in the synthetic sequence is enabled by the judicious choice of tactics. The requisite connectivity pattern of the perhydroindanone motif is rapidly established in a sequence of cycloaddition and radical cyclization events. Application of this strategy allows for preparation of the target natural product in 16 steps from commercially available material.
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- 2022
9. Cooperative Stereoinduction in Asymmetric Photocatalysis
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Chapman, Steven J, Swords, Wesley B, Le, Christine M, Guzei, Ilia A, Toste, F Dean, and Yoon, Tehshik P
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Organic Chemistry ,Chemical Sciences ,Catalysis ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Stereoinduction in complex organic reactions often involves the influence of multiple stereocontrol elements. The interaction among these can often result in the observation of significant cooperative effects that afford different rates and selectivities between the matched and mismatched sets of stereodifferentiating chiral elements. The elucidation of matched/mismatched effects in ground-state chemical reactions was a critically important theme in the maturation of modern stereocontrolled synthesis. The development of robust methods for the control of photochemical reactions, however, is a relatively recent development, and similar cooperative stereocontrolling effects in excited-state enantioselective photoreactions have not previously been documented. Herein, we describe a tandem chiral photocatalyst/Brønsted acid strategy for highly enantioselective [2 + 2] photocycloadditions of vinylpyridines. Importantly, the matched and mismatched chiral catalyst pairs exhibit different reaction rates and enantioselectivities across a range of coupling partners. We observe no evidence of ground-state interactions between the catalysts and conclude that these effects arise from their cooperative behavior in a transient excited-state assembly. These results suggest that similar matched/mismatched effects might be important in other classes of enantioselective dual-catalytic photochemical reactions.
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- 2022
10. Total synthesis of himastatin
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D'Angelo, Kyan A, Schissel, Carly K, Pentelute, Bradley L, and Movassaghi, Mohammad
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Organic Chemistry ,Chemical Sciences ,Anti-Bacterial Agents ,Bacillus subtilis ,Cell Membrane ,Chemistry Techniques ,Synthetic ,Dimerization ,Molecular Structure ,Peptides ,Cyclic ,Stereoisomerism ,General Science & Technology - Abstract
The natural product himastatin has an unusual homodimeric structure that presents a substantial synthetic challenge. We report the concise total synthesis of himastatin from readily accessible precursors, incorporating a final-stage dimerization strategy that was inspired by a detailed consideration of the compound's biogenesis. Combining this approach with a modular synthesis enabled expedient access to more than a dozen designed derivatives of himastatin, including synthetic probes that provide insight into its antibiotic activity.
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- 2022
11. Development of Chiral Ligands for the Transition‐Metal‐Catalyzed Enantioselective Silylation and Borylation of C−H Bonds
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Su, Bo and Hartwig, John F
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Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Boron Compounds ,Catalysis ,Ligands ,Molecular Structure ,Silicon Compounds ,Stereoisomerism ,Transition Elements ,borylation ,C-H bond functionalization ,enantioselective C-H activation ,ligand design ,silylation ,C−H bond functionalization ,enantioselective C−H activation ,Chemical sciences - Abstract
Enantioselective reactions that install functional groups at the positions of unactivated C-H bonds can be envisioned to produce intermediates for the synthesis of the active ingredients in pharmaceuticals and agrochemicals directly from simple feedstocks. Among these C-H bond functionalization reactions, those that form carbon-silicon (C-Si) and carbon-boron (C-B) bonds have been pursued because the products of these reactions can be converted to those containing a wide range of functional groups and because compounds containing silicon and boron possess unique properties that can be valuable for medicinal and materials chemistry. Although the silylation and borylation of C-H bonds have undergone extensive development during the past two decades, enantioselective versions of these reactions were not known until a few years ago. In this Minireview, we present the rapid development of enantioselective silylation and borylation of C-H bonds, with an emphasis on the design and development of the types of chiral ligands needed to achieve these reactions and an intention to inspire an expansion of these types of transformations.
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- 2022
12. Evolution of a Short and Stereocontrolled Synthesis of (+)-7,20-Diisocyanoadociane
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Roosen, Philipp C, Karns, Alexander S, Ellis, Bryan D, and Vanderwal, Christopher D
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Organic Chemistry ,Chemical Sciences ,Nitriles ,Pyrenes ,Stereoisomerism ,Medicinal and Biomolecular Chemistry ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
A full account of the development of a concise and highly stereoselective synthesis of (+)-7,20-diisocyanoadociane (DICA)─a structurally complex isocyanoditerpene with potent antiplasmodial activity─is described. The strategy that evolved relies on the rapid construction of unsaturated tricyclic precursors designed to undergo stereocontrolled Birch reductions and a subsequent "bay ring" formation to generate the isocycloamphilectane core. This report is divided into three sections: (1) a description of the initial strategy and the results that focused our efforts on a single route to the DICA core, (2) a discussion of the precise choreography needed to enable a first-generation formal synthesis of (±)-DICA, and (3) the execution of a 13-step second-generation synthesis of (+)-DICA that builds on important lessons learned from the first-generation effort.
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- 2022
13. Stereodivergent Attached‐Ring Synthesis via Non‐Covalent Interactions: A Short Formal Synthesis of Merrilactone A
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Huffman, Benjamin J, Chu, Tiffany, Hanaki, Yusuke, Wong, Jonathan J, Chen, Shuming, Houk, Kendall N, and Shenvi, Ryan A
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Cyclization ,Lactones ,Molecular Structure ,Sesquiterpenes ,Stereoisomerism ,attached-ring ,diastereoselectivity ,Michael addition ,natural products ,synthesis design ,Chemical Sciences ,Organic Chemistry - Abstract
A strategy to control the diastereoselectivity of bond formation at a prochiral attached-ring bridgehead is reported. An unusual stereodivergent Michael reaction relies on basic vs. Lewis acidic conditions and non-covalent interactions to control re- vs. si- facial selectivity en route to fully substituted attached-rings. This divergency reflects differential engagement of one rotational isomer of the attached-ring system. The successful synthesis of an erythro subtarget diastereomer ultimately leads to a short formal synthesis of merrilactone A.
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- 2022
14. A Concise Enantioselective Approach to Quassinoids
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Thomas, William P and Pronin, Sergey V
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Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Quassins ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
A synthetic approach to quassinoids is described. The route to the tetracyclic core relies on an efficient and selective annulation between two unsaturated carbonyl components that is initiated by catalytic hydrogen atom transfer from an iron hydride to an alkene. Application of this strategy allows for enantioselective synthesis of quassin, which is prepared in 14 steps from commercially available starting material.
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- 2022
15. Violations. How Nature Circumvents the Woodward–Hoffmann Rules and Promotes the Forbidden Conrotatory 4n + 2 Electron Electrocyclization of Prinzbach’s Vinylogous Sesquifulvalene
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Kukier, Garrett A, Turlik, Aneta, Xue, Xiao-Song, and Houk, KN
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Organic Chemistry ,Chemical Sciences ,Theoretical and Computational Chemistry ,Cyclization ,Hydrocarbons ,Cyclic ,Molecular Structure ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Woodward and Hoffmann, in their treatise on orbital symmetry in 1969, stated "Violations. There are none!" Prinzbach reported in 1978 that the electrocyclization of vinylogous sesquifulvalene occurs exclusively through the Woodward-Hoffmann orbital-symmetry-forbidden 14π-electron conrotatory pathway, despite the availability of a variety of orbital-symmetry-allowed processes. Prinzbach later demonstrated that an 18π-electron homologue exhibits the same forbidden behavior. And yet, the analogous vinylogous pentafulvalene and heptafulvalene both follow the orbital symmetry rules, each proceeding through its allowed conrotatory 12π and 16π process, respectively. We report the investigation of these reactions with ωB97X-D DFT. The physical origins of the flagrant Prinzbach violations of the Woodward-Hoffmann orbital symmetry selection rules have now been elucidated by these calculations in conjunction with extensive analyses and comparisons to electrocyclizations that obey the Woodward-Hoffmann rules. This remarkable reversal of the Rules (the 14π-electron-forbidden process is found to be 11 kcal/mol more energetically facile than the allowed process) occurs due to the high degree of polarization of this hydrocarbon, such that conrotatory electrocyclization of vinylogous sesquifulvalene behaves like a cyclopentadienide combining with a tropylium. These results are compared to other forbidden pericyclic processes driven by steric constraints and strain release or by diradical character of the reactants that facilitates the formation of diradical transition states for symmetry-forbidden reactions. We predict how strong donor-acceptor substitution can modify nodal properties to level the difference between allowed and forbidden electrocyclic reaction barriers, and we provide computational predictions of two such cases.
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- 2021
16. Stereodivergent atom-transfer radical cyclization by engineered cytochromes P450
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Zhou, Qi, Chin, Michael, Fu, Yue, Liu, Peng, and Yang, Yang
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Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Biocatalysis ,Chemistry Techniques ,Synthetic ,Cyclization ,Cytochrome P-450 Enzyme System ,Directed Molecular Evolution ,Free Radicals ,Molecular Structure ,Oxidation-Reduction ,Protein Engineering ,Stereoisomerism ,General Science & Technology - Abstract
Naturally occurring enzymes can be a source of unnatural reactivity that can be molded by directed evolution to generate efficient biocatalysts with valuable activities. Owing to the lack of exploitable stereocontrol elements in synthetic systems, steering the absolute and relative stereochemistry of free-radical processes is notoriously difficult in asymmetric catalysis. Inspired by the innate redox properties of first-row transition-metal cofactors, we repurposed cytochromes P450 to catalyze stereoselective atom-transfer radical cyclization. A set of metalloenzymes was engineered to impose substantial stereocontrol over the radical addition step and the halogen rebound step in these unnatural processes, allowing enantio- and diastereodivergent radical catalysis. This evolvable metalloenzyme platform represents a promising solution to tame fleeting radical intermediates for asymmetric catalysis.
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- 2021
17. Unnatural biosynthesis by an engineered microorganism with heterologously expressed natural enzymes and an artificial metalloenzyme
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Huang, Jing, Liu, Zhennan, Bloomer, Brandon J, Clark, Douglas S, Mukhopadhyay, Aindrila, Keasling, Jay D, and Hartwig, John F
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Biotechnology ,Genetics ,Bioengineering ,Bacterial Proteins ,Cytochrome P-450 Enzyme System ,Escherichia coli ,Iridium ,Mesoporphyrins ,Metabolic Engineering ,Stereoisomerism ,Sulfolobus solfataricus ,Terpenes ,Chemical Sciences ,Organic Chemistry - Abstract
Synthetic biology enables microbial hosts to produce complex molecules from organisms that are rare or difficult to cultivate, but the structures of these molecules are limited to those formed by reactions of natural enzymes. The integration of artificial metalloenzymes (ArMs) that catalyse unnatural reactions into metabolic networks could broaden the cache of molecules produced biosynthetically. Here we report an engineered microbial cell expressing a heterologous biosynthetic pathway, containing both natural enzymes and ArMs, that produces an unnatural product with high diastereoselectivity. We engineered Escherichia coli with a heterologous terpene biosynthetic pathway and an ArM containing an iridium-porphyrin complex that was transported into the cell with a heterologous transport system. We improved the diastereoselectivity and product titre of the unnatural product by evolving the ArM and selecting the appropriate gene induction and cultivation conditions. This work shows that synthetic biology and synthetic chemistry can produce, by combining natural and artificial enzymes in whole cells, molecules that were previously inaccessible to nature.
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- 2021
18. Sequential Norrish–Yang Cyclization and C–C Cleavage/Cross-Coupling of a [4.1.0] Fused Saturated Azacycle
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Amber, Charis, Park, Bohyun, Xu, Li-Ping, Roque, Jose B, Yeung, Charles S, Musaev, Djamaladdin G, Sarpong, Richmond, and LaLonde, Rebecca Lyn
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Organic Chemistry ,Chemical Sciences ,Cyclization ,Physical Phenomena ,Stereoisomerism ,beta-Lactams ,Medicinal and Biomolecular Chemistry ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
Methods that functionalize the periphery of azacylic scaffolds have garnered increasing interest in recent years. Herein, we investigate the selectivity of a solid-state Norrish-Yang cyclization (NYC) and subsequent C-C cleavage/cross-coupling reaction of a strained cyclopropane-fused azacyclic system. Surprisingly, the NYC primarily furnished a single lactam constitutional and diastereo-isomer. The regioselectivity of the C-C cleavage of the α-hydroxy-β-lactam moiety could be varied by altering the ligand set used in the coupling chemistry. Experimental and computational observations are discussed.
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- 2021
19. Enantioselective Addition of Pyrazoles to Dienes**
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Jiu, Alexander Y, Slocumb, Hannah S, Yeung, Charles S, Yang, Xiao‐Hui, and Dong, Vy M
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Alkadienes ,Catalysis ,Ligands ,Molecular Structure ,Palladium ,Pyrazoles ,Stereoisomerism ,1 ,3-diene ,enantioselectivity ,hydroamination ,Pd-catalysis ,pyrazole ,1 ,3-diene ,Chemical Sciences ,Organic Chemistry - Abstract
We report the first enantioselective addition of pyrazoles to 1,3-dienes. Secondary and tertiary allylic pyrazoles can be generated with excellent regioselectivity. Mechanistic studies support a pathway distinct from previous hydroaminations: a Pd0 -catalyzed ligand-to-ligand hydrogen transfer (LLHT). This hydroamination tolerates a range of functional groups and advances the field of diene hydrofunctionalization.
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- 2021
20. Generation of Axially Chiral Fluoroallenes through a Copper-Catalyzed Enantioselective β‑Fluoride Elimination
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O’Connor, Thomas J, Khanh, Binh, Nafie, Jordan, Liu, Peng, and Toste, F Dean
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Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Alkadienes ,Catalysis ,Copper ,Density Functional Theory ,Fluorides ,Molecular Conformation ,Stereoisomerism ,Thermodynamics ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Herein we report the copper-catalyzed silylation of propargylic difluorides to generate axially chiral, tetrasubstituted monofluoroallenes in both good yields (27 examples >80%) and enantioselectivities (82-98% ee). Compared to previously reported synthetic routes to axially chiral allenes (ACAs) from prochiral substrates, a mechanistically distinct reaction has been developed: the enantiodiscrimination between enantiotopic fluorides to set an axial stereocenter. DFT calculations and vibrational circular dichroism (VCD) suggest that β-fluoride elimination from an alkenyl copper intermediate likely proceeds through a syn-β-fluoride elimination pathway rather than an anti-elimination pathway. The effects of the C1-symmetric Josiphos-derived ligand on reactivity and enantioselectivity were investigated. Not only does this report showcase that alkenyl copper species (like their alkyl counterparts) can undergo β-fluoride elimination, but this elimination can be achieved in an enantioselective fashion.
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- 2021
21. Study of Ground State Interactions of Enantiopure Chiral Quaternary Ammonium Salts and Amides, Nitroalkanes, Nitroalkenes, Esters, Heterocycles, Ketones and Fluoroamides
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Bencivenni, Grazia, Illera, Diana Salazar, Moccia, Maria, Houk, KN, Izzo, Joseph A, Novacek, Johanna, Grieco, Paolo, Vetticatt, Mathew J, Waser, Mario, and Adamo, Mauro FA
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Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Amides ,Catalysis ,Esters ,Ketones ,Quaternary Ammonium Compounds ,Salts ,Stereoisomerism ,heterocycles ,hydrogen bonds ,NMR spectroscopy ,organocatalysis ,phase-transfer catalysis ,General Chemistry ,Chemical sciences - Abstract
Chiral phase-transfer catalysis provides high level of enantiocontrol, however no experimental data showed the interaction of catalysts and substrates. 1 H NMR titration was carried out on Cinchona and Maruoka ammonium bromides vs. nitro, carbonyl, heterocycles, and N-F containing compounds. It was found that neutral organic species and quaternary ammonium salts interacted via an ensemble of catalyst + N-C-H and (sp2 )C-H, specific for each substrate studied. The correspondent BArF salts interacted with carbonyls via a diverse set of + N-C-H and (sp2 )C-H compared to bromides. This data suggests that BArF ammonium salts may display a different enantioselectivity profile. Although not providing quantitative data for the affinity constants, the data reported proofs that chiral ammonium salts coordinate with substrates, prior to transition state, through specific C-H positions in their structures, providing a new rational to rationalize the origin of enantioselectivity in their catalyses.
- Published
- 2021
22. Chiral lipid bilayers are enantioselectively permeable
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Hu, Juan, Cochrane, Wesley G, Jones, Alexander X, Blackmond, Donna G, and Paegel, Brian M
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Chemical Sciences ,Alkynes ,Amino Acids ,Cholesterol ,Fluorescent Dyes ,Lipid Bilayers ,Permeability ,Phosphatidylcholines ,Stereoisomerism ,Organic Chemistry ,Chemical sciences - Abstract
Homochiral membrane bilayers organize biological functions in all domains of life. The membrane's permeability-its key property-correlates with a molecule's lipophilicity, but the role of the membrane's rich and uniform stereochemistry as a permeability determinant is largely ignored in empirical and computational measurements. Here, we describe a new approach to measuring permeation using continuously generated microfluidic droplet interface bilayers (DIBs, generated at a rate of 480 per minute) and benchmark this system by monitoring fluorescent dye DIB permeation over time. Enantioselective permeation of alkyne-labelled amino acids (Ala, Val, Phe, Pro) and dipeptides through a chiral phospholipid bilayer was demonstrated using DIB transport measurements; the biological L enantiomers permeated faster than the D enantiomers (from 1.2-fold to 6-fold for Ala to Pro). Enantioselective permeation both poses a potentially unanticipated criterion for drug design and offers a kinetic mechanism for the abiotic emergence of homochirality via chiral transfer between sugars, amino acids and lipids.
- Published
- 2021
23. Origins of Endo Selectivity in Diels–Alder Reactions of Cyclic Allene Dienophiles
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Ramirez, Melissa, Svatunek, Dennis, Liu, Fang, Garg, Neil K, and Houk, Kendall N
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Cycloaddition Reaction ,Cyclohexenes ,Molecular Structure ,Stereoisomerism ,cyclic allenes ,cycloadditions ,density functional theory ,diastereoselectivity ,substituent effects ,Chemical Sciences ,Organic Chemistry - Abstract
Strained cyclic allenes, first discovered in 1966 by Wittig and co-workers, have recently emerged as valuable synthetic building blocks. Previous experimental investigations, and computations reported here, demonstrate that the Diels-Alder reactions of furans and pyrroles with 1,2-cyclohexadiene and oxa- and azaheterocyclic analogs proceed with endo selectivity. This endo selectivity gives the adduct with the allylic saturated carbon of the cyclic allene endo to the diene carbons. The selectivity is very general and useful in synthetic applications. Our computational study establishes the origins of this endo selectivity. We analyze the helical frontier molecular orbitals of strained cyclic allenes and show how secondary orbital and electrostatic effects influence stereoselectivity. The LUMO of carbon-3 of the allene (C-3 is not involved in primary orbital interactions) interacts in a stabilizing fashion with the HOMO of the diene in such a way that the carbon of the cyclic allene attached to C-1 favors the endo position in the transition state. The furan LUMO, allene HOMO interaction reinforces this preference. These mechanistic studies are expected to prompt the further use of long-avoided strained cyclic allenes in chemical synthesis.
- Published
- 2021
24. Total Synthesis and Computational Investigations of Sesquiterpene-Tropolones Ameliorate Stereochemical Inconsistencies and Resolve an Ambiguous Biosynthetic Relationship
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Bemis, Christopher Y, Ungarean, Chad N, Shved, Alexander S, Jamieson, Cooper S, Hwang, Taehwan, Lee, Ken S, Houk, KN, and Sarlah, David
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Organic Chemistry ,Chemical Sciences ,Infectious Diseases ,Biological Products ,Cycloaddition Reaction ,Density Functional Theory ,Heterocyclic Compounds ,4 or More Rings ,Molecular Conformation ,Monocyclic Sesquiterpenes ,Sesquiterpenes ,Stereoisomerism ,Tropolone ,General Chemistry ,Chemical sciences ,Engineering - Abstract
The sesquiterpene-tropolones belong to a distinctive structural class of meroterpene natural products with impressive biological activities, including anticancer, antifungal, antimalarial, and antibacterial. In this article, we describe a concise, modular, and cycloaddition-based approach to a series of sesquiterpene mono- and bistropolones, including (-)-epolone B, (+)-isoepolone B, (±)-dehydroxypycnidione, and (-)-10-epi-pycnidione. Alongside the development of a general strategy to access this unique family of metabolites were computational modeling studies that justified the diastereoselectivity observed during key cycloadditions. Ultimately, these studies prompted stereochemical reassignments of the pycnidione subclass and shed additional light on the biosynthesis of these remarkable natural products.
- Published
- 2021
25. Abiotic reduction of ketones with silanes catalysed by carbonic anhydrase through an enzymatic zinc hydride
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Ji, Pengfei, Park, Jeeyoung, Gu, Yang, Clark, Douglas S, and Hartwig, John F
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Inorganic Chemistry ,Chemical Sciences ,Alcohols ,Biocatalysis ,Carbonic Anhydrase II ,Humans ,Hydrogen ,Ketones ,Models ,Chemical ,Molecular Docking Simulation ,Oxidation-Reduction ,Protein Binding ,Silanes ,Stereoisomerism ,Zinc ,Organic Chemistry ,Chemical sciences - Abstract
Enzymatic reactions through mononuclear metal hydrides are unknown in nature, despite the prevalence of such intermediates in the reactions of synthetic transition-metal catalysts. If metalloenzymes could react through abiotic intermediates like these, then the scope of enzyme-catalysed reactions would expand. Here we show that zinc-containing carbonic anhydrase enzymes catalyse hydride transfers from silanes to ketones with high enantioselectivity. We report mechanistic data providing strong evidence that the process involves a mononuclear zinc hydride. This work shows that abiotic silanes can act as reducing equivalents in an enzyme-catalysed process and that monomeric hydrides of electropositive metals, which are typically unstable in protic environments, can be catalytic intermediates in enzymatic processes. Overall, this work bridges a gap between the types of transformation in molecular catalysis and biocatalysis.
- Published
- 2021
26. Mechanism and Origins of Stereoselectivity of the Aldol-Tishchenko Reaction of Sulfinimines
- Author
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Turlik, Aneta, Ando, Kaori, Mackey, Pamela, Alcock, Emma, Light, Mark, McGlacken, Gerard P, and Houk, KN
- Subjects
Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Aldehydes ,Imines ,Ketones ,Stereoisomerism ,Sulfonium Compounds ,Medicinal and Biomolecular Chemistry ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
Density functional theory computations have elucidated the mechanism and origins of stereoselectivity in McGlacken's aldol-Tishchenko reaction for the diastereoselective synthesis of 1,3-amino alcohols using Ellman's t-butylsulfinimines as chiral auxiliaries. Variations of stereochemical outcome are dependent on the nature of the ketone starting materials used, and the aspects leading to these differences have been rationalized. The intramolecular hydride transfer step is the rate- and stereochemistry-determining step, and all prior steps are reversible.
- Published
- 2021
27. Stereocontrolled Radical Bicyclizations of Oxygenated Precursors Enable Short Syntheses of Oxidized Abietane Diterpenoids
- Author
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Vrubliauskas, Darius, Gross, Benjamin M, and Vanderwal, Christopher D
- Subjects
Organic Chemistry ,Chemical Sciences ,Abietanes ,Catalysis ,Cobalt ,Cyclization ,Diterpenes ,Oxidation-Reduction ,Oxygen ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
The power of cation-initiated cyclizations of polyenes for the synthesis of polycyclic terpenoids cannot be overstated. However, a major limitation is the intolerance of many relevant reaction conditions toward the inclusion in the substrate of polar functionality, particularly in unprotected form. Radical polycyclizations are important alternatives to bioinspired cationic variants, in part owing to the range of possible initiation strategies, and in part for the functional group tolerance of radical reactions. In this article, we demonstrate that Co-catalyzed MHAT-initiated radical bicyclizations are not only tolerant of oxidation at virtually every position in the substrate, oftentimes in unprotected form, but these functional groups can also contribute to high levels of stereochemical control in these complexity-generating transformations. Specifically, we show the effects of protected or unprotected hydroxy groups at six different positions and their impact on stereoselectivity. Further, we show how multiply oxidized substrates perform in these reactions, and finally, we document the utility of these reactions in the synthesis of three aromatic abietane diterpenoids.
- Published
- 2021
28. Enantioselective Addition of α‐Nitroesters to Alkynes
- Author
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Davison, Ryan T, Parker, Patrick D, Hou, Xintong, Chung, Crystal P, Augustine, Sara A, and Dong, Vy M
- Subjects
Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Alkynes ,Amino Acids ,Catalysis ,Coordination Complexes ,Esters ,Hydrogen ,Rhodium ,Stereoisomerism ,alkynes ,amino acids ,nitroester ,rhodium hydride ,tandem catalysis ,Chemical sciences - Abstract
By using Rh-H catalysis, we couple α-nitroesters and alkynes to prepare α-amino-acid precursors. This atom-economical strategy generates two contiguous stereocenters, with high enantio- and diastereocontrol. In this transformation, the alkyne undergoes isomerization to generate a RhIII -π-allyl electrophile, which is trapped by an α-nitroester nucleophile. A subsequent reduction with In powder transforms the allylic α-nitroesters to the corresponding α,α-disubstituted α-amino esters.
- Published
- 2021
29. Design and synthesis of herboxidiene derivatives that potently inhibit in vitro splicing
- Author
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Ghosh, Arun K, Allu, Srinivasa Rao, Reddy, Guddeti Chandrashekar, Lopez, Adriana Gamboa, Mendez, Patricia, and Jurica, Melissa S
- Subjects
Antineoplastic Agents ,Fatty Alcohols ,HeLa Cells ,Humans ,Pyrans ,RNA Splicing ,Spliceosomes ,Stereoisomerism ,Hela Cells ,Medicinal and Biomolecular Chemistry ,Organic Chemistry - Abstract
Herboxidiene is a potent antitumor agent that targets the SF3B subunit of the spliceosome. Herboxidiene possesses a complex structural architecture with nine stereocenters and design of potent less complex structures would be of interest as a drug lead as well as a tool for studying SF3B1 function in splicing. We investigated a number of C-6 modified herboxidiene derivatives in an effort to eliminate this stereocenter and, also to understand the importance of this functionality. The syntheses of structural variants involved a Suzuki-Miyaura cross-coupling reaction as the key step. The functionalized tetrahydrofuran core has been constructed from commercially available optically active tri-O-acetyl-d-glucal. We investigated the effect of these derivatives on splicing chemistry. The C-6 alkene derivative showed very potent splicing inhibitory activity similar to herboxidiene. Furthermore, the C-6 gem-dimethyl derivative also exhibited very potent in vitro splicing inhibitory activity comparable to herboxidiene.
- Published
- 2021
30. Global Diastereoconvergence in the Ireland–Claisen Rearrangement of Isomeric Enolates: Synthesis of Tetrasubstituted α‑Amino Acids
- Author
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Fulton, Tyler J, Cusumano, Alexander Q, Alexy, Eric J, Du, Yun E, Zhang, Haiming, Houk, KN, and Stoltz, Brian M
- Subjects
Chemical Sciences ,Organic Chemistry ,Physical Chemistry ,Alkenes ,Amino Acids ,Chemistry Techniques ,Synthetic ,Density Functional Theory ,Ketones ,Models ,Molecular ,Molecular Conformation ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
A dual experimental/theoretical investigation of the Ireland-Claisen rearrangement of tetrasubstituted α-phthalimido ester enolates to afford α-tetrasubstituted, β-trisubstituted α-amino acids (generally >20:1 dr) is described. For trans allylic olefins, the Z- and E-enol ethers proceed through chair and boat transition states, respectively. For cis allylic olefins, the trend is reversed. As a result, the diastereochemical outcome of the reaction is preserved regardless of the geometry of the enolate or the accompanying allylic olefin. We term this unique convergence of all possible olefin isomers global diastereoconvergence. This reaction manifold circumvents limitations in present-day technologies for the stereoselective enolization of α,α-disubstituted allyl esters. Density functional theory paired with state-of-the-art local coupled-cluster theory (DLPNO-CCSD(T)) was employed for the accurate determination of quantum mechanical energies.
- Published
- 2020
31. Synthetic Access to Cannabidiol and Analogs as Active Pharmaceutical Ingredients
- Author
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Pirrung, Michael C
- Subjects
Pharmacology and Pharmaceutical Sciences ,Biomedical and Clinical Sciences ,Cannabinoid Research ,Substance Misuse ,Therapeutic Cannabinoid Research ,Drug Abuse (NIDA only) ,Cannabidiol Research ,5.1 Pharmaceuticals ,Development of treatments and therapeutic interventions ,Good Health and Well Being ,Cannabidiol ,Cannabinoids ,Cannabis ,Plant Roots ,Stereoisomerism ,Terpenes ,Yeasts ,Medicinal and Biomolecular Chemistry ,Organic Chemistry ,Medicinal & Biomolecular Chemistry ,Pharmacology and pharmaceutical sciences ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
Cannabinoids have surely been one of the most widely self-administered drugs other than caffeine. The U.S. FDA recently approved one cannabinoid-based drug whose active pharmaceutical ingredient (API) is cannabidiol (CBD). The long history of individual use of cannabis for a wide range of conditions has sparked great interest in other uses of CBD, in ethical drugs and botanical supplements as well as in foods and nonprescription wellness products. CBD may be sourced from cannabis plants but can also be prepared synthetically, the topic of this review.
- Published
- 2020
32. Precursor-directed biosynthesis of catechol compounds in Acinetobacter bouvetii DSM 14964
- Author
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Reitz, Zachary L and Butler, Alison
- Subjects
Acinetobacter ,Catechols ,Molecular Structure ,Stereoisomerism ,Chemical Sciences ,Organic Chemistry - Abstract
Genome mining for VibH homologs reveals several species of Acinetobacter with a gene cluster that putatively encodes the biosynthesis of catechol siderophores with an amine core. A. bouvetii DSM 14964 produces three novel biscatechol siderophores: propanochelin (1), butanochelin (2), and pentanochelin (3). This strain has a relaxed specificity for the amine substrate, allowing for the biosynthesis of a variety of non-natural siderophore analogs by precursor directed biosynthesis. Of potential synthetic utility, A. bouvetii DSM 14964 condenses 2,3-dihydroxybenzoic acid (2,3-DHB) to allylamine and propargylamine, producing catecholic compounds which bind iron(iii) and may be further modified via thiol-ene or azide-alkyne click chemistry.
- Published
- 2020
33. Catalytic Dynamic Kinetic Resolutions in Tandem to Construct Two-Axis Terphenyl Atropisomers
- Author
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Beleh, Omar M, Miller, Edward, Toste, F Dean, and Miller, Scott J
- Subjects
Macromolecular and Materials Chemistry ,Organic Chemistry ,Chemical Sciences ,Catalysis ,Kinetics ,Molecular Structure ,Peptides ,Stereoisomerism ,Terphenyl Compounds ,General Chemistry ,Chemical sciences ,Engineering - Abstract
The defined structure of molecules bearing multiple stereogenic axes is of increasing relevance to materials science, pharmaceuticals, and catalysis. However, catalytic enantioselective approaches to control multiple stereogenic axes remain synthetically challenging. We report the catalytic synthesis of two-axis terphenyl atropisomers, with complementary strategies to both chlorinated and brominated variants, formed with high diastereo- and enantioselectivity. The chemistry proceeds through a sequence of two distinct dynamic kinetic resolutions: first, an atroposelective ring opening of Bringmann-type lactones produces a product with one established axis of chirality, and second, a stereoselective arene halogenation delivers the product with the second axis of chirality established. In order to achieve these results, a class of Brønsted basic guanidinylated peptides, which catalyze an efficient atroposelective chlorination, is reported for the first time. In addition, a complementary bromination is reported, which also establishes the second stereogenic axis. These bromo-terphenyls are accessible following the discovery that chiral anion phase transfer catalysis by C2-symmetric phosphoric acids allows catalyst control in the second stereochemistry-determining event. Accordingly, we established the fully catalyst-controlled stereodivergent synthesis of all possible chlorinated stereoisomers while also demonstrating diastereodivergence in the brominated variants, with significant levels of enantioselectivity in all cases.
- Published
- 2020
34. Bioisosteric substitution of adamantane with bicyclic lipophilic groups improves water solubility of human soluble epoxide hydrolase inhibitors
- Author
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Burmistrov, Vladimir, Morisseau, Christophe, Karlov, Dmitry, Pitushkin, Dmitry, Vernigora, Andrey, Rasskazova, Elena, Butov, Gennady M, and Hammock, Bruce D
- Subjects
Medicinal and Biomolecular Chemistry ,Chemical Sciences ,Adamantane ,Binding Sites ,Enzyme Inhibitors ,Epoxide Hydrolases ,Humans ,Lipids ,Molecular Docking Simulation ,Protein Binding ,Solubility ,Stereoisomerism ,Structure-Activity Relationship ,Urea ,Water ,Soluble epoxide hydrolase ,Inhibitor ,Camphor ,Norcamphane ,Organic Chemistry ,Pharmacology and Pharmaceutical Sciences ,Medicinal & Biomolecular Chemistry ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
A series of inhibitors of the soluble epoxide hydrolase (sEH) containing lipophilic groups of natural origin (camphanyl, norcamphanyl, furan-2-yl) were developed. Inhibitory potency ranging from 0.4 nM to 2.16 μM were obtained. While having the same level of inhibitory activity bicyclic ureas are up to 10-fold more soluble than the corresponding ureas containing adamantyl or 4-trifluoromethoxyphenyl substituents. This makes them easier to formulate, more bioavailable and thus more promising as therapeutic sEH inhibitors. Endo/exo-form of compound 2b derived from l-camphor is 14-fold more potent than the corresponding analogue derived from d-camphor (IC50 = 3.7 nM vs. 50.6 nM) indicating enantiomeric preference.
- Published
- 2020
35. Gold-Catalyzed Synthesis of Chiral Cyclopentadienyl Esters via Chirality Transfer
- Author
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Zhao, Ke, Hsu, Yu-Chen, Yang, Ziguang, Liu, Rai-Shung, and Zhang, Liming
- Subjects
Alkylation ,Catalysis ,Cyclopentanes ,Esters ,Gold ,Molecular Structure ,Stereoisomerism ,Chemical Sciences ,Organic Chemistry - Abstract
Efficient access to chiral cyclopentadienyl esters from readily accessible chiral enynyl ester substrates is developed. Typically high levels of chirality transfer realized in this homogeneous gold catalysis are attributed to the intermediacy of a chiral bent allene gold complex. Cyclopentadienyl esters can be prepared in good yields and with excellent enantiomeric excesses. The synthetic utilities of the chiral cyclopentadienyl esters are demonstrated by the Diels-Alder reactions, fluorination, alkylation, and epoxidation without any notable erosion of enantiopurity.
- Published
- 2020
36. Enantioselective Intramolecular Allylic Substitution via Synergistic Palladium/Chiral Phosphoric Acid Catalysis: Insight into Stereoinduction through Statistical Modeling
- Author
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Tsai, Cheng‐Che, Sandford, Christopher, Wu, Tao, Chen, Buyun, Sigman, Matthew S, and Toste, F Dean
- Subjects
Organic Chemistry ,Chemical Sciences ,Catalysis ,Models ,Statistical ,Palladium ,Phosphoric Acids ,Stereoisomerism ,allylic substitution ,asymmetric catalysis ,noncovalent interactions ,palladium ,statistical modeling ,Chemical sciences - Abstract
The mode of asymmetric induction in an enantioselective intramolecular allylic substitution reaction catalyzed by a combination of palladium and a chiral phosphoric acid was investigated by a combined experimental and statistical modeling approach. Experiments to probe nonlinear effects, the reactivity of deuterium-labeled substrates, and control experiments revealed that nucleophilic attack to the π-allylpalladium intermediate is the enantio-determining step, in which the chiral phosphate anion is involved in stereoinduction. Using multivariable linear regression analysis, we determined that multiple noncovalent interactions with the chiral environment of the phosphate anion are integral to enantiocontrol in the transition state. The synthetic protocol to form chiral pyrrolidines was further applied to the asymmetric construction of C-O bonds at fully substituted carbon centers in the synthesis of chiral 2,2-disubstituted benzomorpholines.
- Published
- 2020
37. Regio- and Enantioselective Bromocyclization of Difluoroalkenes as a Strategy to Access Tetrasubstituted Difluoromethylene-Containing Stereocenters
- Author
-
Miller, Edward, Kim, Suhong, Gibson, Katarina, Derrick, Jeffrey S, and Toste, F Dean
- Subjects
Organic Chemistry ,Chemical Sciences ,Infectious Diseases ,Alkynes ,Benzoxazines ,Cyclopropanes ,Hydrocarbons ,Fluorinated ,Molecular Structure ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Difluoromethylene-containing compounds have attracted substantial research interest over the past decades for their ability to mimic biological functions of traditional functional groups while providing a wide variety of pharmacological benefits bestowed by the C-F bond. We report a novel strategy to access RCF2Br-containing heterocycles by regio- and enantioselective bromocyclization of difluoroalkenes enabled by chiral anion phase-transfer catalysis. The utility of this methodology was highlighted through a synthesis of an analogue of efavirenz, a drug used for treating HIV. Additionally, the synthetic versatility of the CF2Br intermediates was showcased through functionalization to a variety of enantioenriched α,α-difluoromethylene-containing products.
- Published
- 2020
38. Highly Diastereoselective Functionalization of Piperidines by Photoredox-Catalyzed α‑Amino C–H Arylation and Epimerization
- Author
-
Walker, Morgan M, Koronkiewicz, Brian, Chen, Shuming, Houk, KN, Mayer, James M, and Ellman, Jonathan A
- Subjects
Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Catalysis ,Density Functional Theory ,Molecular Conformation ,Nitriles ,Organometallic Compounds ,Oxidation-Reduction ,Photochemical Processes ,Piperidines ,Stereoisomerism ,Thermodynamics ,General Chemistry ,Chemical sciences ,Engineering - Abstract
We report a photoredox-catalyzed α-amino C-H arylation reaction of highly substituted piperidine derivatives with electron-deficient cyano(hetero)arenes. The scope and limitations of the reaction were explored, with piperidines bearing multiple substitution patterns providing the arylated products in good yields and with high diastereoselectivity. To probe the mechanism of the overall transformation, optical and fluorescent spectroscopic methods were used to investigate the reaction. By employing flash-quench transient absorption spectroscopy, we were able to observe electron transfer processes associated with radical formation beyond the initial excited-state Ir(ppy)3 oxidation. Following the rapid and unselective C-H arylation reaction, a slower epimerization occurs to provide the high diastereomer ratio observed for a majority of the products. Several stereoisomerically pure products were resubjected to the reaction conditions, each of which converged to the experimentally observed diastereomer ratios. The observed distribution of diastereomers corresponds to a thermodynamic ratio of isomers based upon their calculated relative energies using density functional theory (DFT).
- Published
- 2020
39. Concise Formal Synthesis of the Pseudopterosins via Anionic Oxy-Cope/Transannular Michael Addition Cascade
- Author
-
Ramella, Vincenzo, Roosen, Philipp C, and Vanderwal, Christopher D
- Subjects
Organic Chemistry ,Chemical Sciences ,Anions ,Cycloaddition Reaction ,Cyclohexanones ,Diterpenes ,Glycosides ,Molecular Structure ,Phenols ,Stereoisomerism ,Chemical sciences - Abstract
An anionic oxy-Cope/transannular Michael addition cascade converts a spirocyclic architecture-readily available by Diels-Alder cycloaddition-into the hydrophenalene carbon skeleton of the pseudopterosin aglycones. Oxidation of the resulting cyclohexenone ring to the phenol that is characteristic of the targets completes a short formal synthesis.
- Published
- 2020
40. 2′-Fluorinated Hydantoins as Chemical Biology Tools for Base Excision Repair Glycosylases
- Author
-
Cao, Sheng, Rogers, JohnPatrick, Yeo, Jongchan, Anderson-Steele, Brittany, Ashby, Jonathan, and David, Sheila S
- Subjects
Genetics ,DNA Glycosylases ,Enzyme Assays ,Humans ,Hydantoins ,Oligonucleotides ,Protein Binding ,Stereoisomerism ,Chemical Sciences ,Biological Sciences ,Organic Chemistry - Abstract
The guanine oxidation products, 5-guanidinohydantoin (Gh) and spiroiminodihydantoin (Sp), are mutagenic and toxic base lesions that are removed by Fpg, Nei, and the Nei-like (NEIL) glycosylases as the first step in base excision repair (BER). The hydantoins are excellent substrates for the NEIL glycosylases in a variety of DNA contexts beyond canonical duplex DNA, implicating the potential impact of repair activity on a multitude of cellular processes. In order to prepare stable derivatives as chemical biology tools, oligonucleotides containing fluorine at the 2'-position of the sugar of 8-oxo-7,8-dihydro-2'-deoxyguanosine2'-F-OG) were synthesized in ribo and arabino configuration. Selective oxidation of 2'-F-OG within a DNA oligonucleotide provided the corresponding 2'-F-Gh or 2'-F-Sp containing DNA. The 2'-F-hydantoins in duplex DNA were found to be highly resistant to the glycosylase activity of Fpg and NEIL1 compared to the unmodified lesion substrates. Surprisingly, however, some glycosylase-mediated base removal from both the 2'-F-ribo- and 2'-F-arabinohydantoin duplex DNA was observed. Notably, the associated β-lyase strand scission reaction of the 2'-F-arabinohydantoins was inhibited such that the glycosylases were "stalled" at the Schiff-base intermediate. Fpg and NEIL1 showed high affinity for the 2'-F-Gh duplexes in both ribo and arabino configurations. However, binding affinity assessed using catalytically inactive variants of Fpg and NEIL1 indicated higher affinity for the 2'-F-riboGh-containing duplexes. The distinct features of glycosylase processing of 2'-F-ribohydantoins and 2'-F-arabinohydantoins illustrate their utility to reveal structural insight into damage recognition and excision by NEIL and related glycosylases and provide opportunities for delineating the impact of lesion formation and repair in cells.
- Published
- 2020
41. Enantioselective Total Synthesis of Macfarlandin C, a Spongian Diterpenoid Harboring a Concave‐Substituted cis‐Dioxabicyclo[3.3.0]octanone Fragment
- Author
-
Allred, Tyler K, Dieskau, André P, Zhao, Peng, Lackner, Gregory L, and Overman, Larry E
- Subjects
Organic Chemistry ,Chemical Sciences ,Bridged Bicyclo Compounds ,Heterocyclic ,Chemistry Techniques ,Synthetic ,Electron Transport ,Stereoisomerism ,C-C coupling ,natural product synthesis ,photoredox chemistry ,radical chemistry ,terpene synthesis ,C−C coupling ,Chemical sciences - Abstract
The enantioselective total synthesis of the rearranged spongian diterpenoid (-)-macfarlandin C is reported. This is the first synthesis of a rearranged spongian diterpenoid in which the bulky hydrocarbon fragment is joined via a quaternary carbon to the highly hindered concave face of the cis-2,8-dioxabicyclo[3.3.0]octan-3-one moiety. The strategy involves a late-stage fragment coupling between a tertiary carbon radical and an electrophilic butenolide resulting in the stereoselective formation of vicinal quaternary and tertiary stereocenters. A stereoselective Mukaiyama hydration that orients a pendant carboxymethyl side chain cis to the bulky octahydronapthalene substituent was pivotal in fashioning the challenging concave-substituted cis-dioxabicyclo[3.3.0]octanone fragment.
- Published
- 2020
42. Demystifying the asymmetry-amplifying, autocatalytic behaviour of the Soai reaction through structural, mechanistic and computational studies
- Author
-
Athavale, Soumitra V, Simon, Adam, Houk, Kendall N, and Denmark, Scott E
- Subjects
Organic Chemistry ,Chemical Sciences ,Aldehydes ,Butanols ,Catalysis ,Density Functional Theory ,Kinetics ,Models ,Chemical ,Organometallic Compounds ,Pyridines ,Stereoisomerism ,Zinc ,Chemical sciences - Abstract
The Soai reaction has profoundly impacted chemists' perspective of autocatalysis, chiral symmetry breaking, absolute asymmetric synthesis and its role in the origin of biological homochirality. Here we describe the unprecedented observation of asymmetry-amplifying autocatalysis in the alkylation of 5-(trimethylsilylethynyl)pyridine-3-carbaldehyde using diisopropylzinc. Kinetic studies with a surrogate substrate and spectroscopic analysis of a series of zinc alkoxides that incorporate specific structural mutations reveal a 'pyridine-assisted cube escape'. The new tetrameric cluster functions as a catalyst that activates the substrate through a two-point binding mode and poises a coordinated diisopropylzinc moiety for alkyl group transfer. Transition-state models leading to both the homochiral and heterochiral products were validated by density functional theory calculations. Moreover, experimental and computational analysis of the heterochiral complex provides a definitive explanation for the nonlinear behaviour of this system. Our deconstruction of the Soai system reveals the structural logic for autocatalyst evolution, function and substrate compatibility-a central mechanistic aspect of this iconic transformation.
- Published
- 2020
43. Enantioselective Allenoate-Claisen Rearrangement Using Chiral Phosphate Catalysts
- Author
-
Miró, Javier, Gensch, Tobias, Ellwart, Mario, Han, Seo-Jung, Lin, Hsin-Hui, Sigman, Matthew S, and Toste, F Dean
- Subjects
Organic Chemistry ,Chemical Sciences ,Amino Acids ,Catalysis ,Models ,Molecular ,Naphthalenes ,Phosphates ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
Herein we report the first highly enantioselective allenoate-Claisen rearrangement using doubly axially chiral phosphate sodium salts as catalysts. This synthetic method provides access to β-amino acid derivatives with vicinal stereocenters in up to 95% ee. We also investigated the mechanism of enantioinduction by transition state (TS) computations with DFT as well as statistical modeling of the relationship between selectivity and the molecular features of both the catalyst and substrate. The mutual interactions of charge-separated regions in both the zwitterionic intermediate generated by reaction of an amine to the allenoate and the Na+-salt of the chiral phosphate leads to an orientation of the TS in the catalytic pocket that maximizes favorable noncovalent interactions. Crucial arene-arene interactions at the periphery of the catalyst lead to a differentiation of the TS diastereomers. These interactions were interrogated using DFT calculations and validated through statistical modeling of parameters describing noncovalent interactions.
- Published
- 2020
44. Bioinspired Synthesis of (−)‐PF‐1018
- Author
-
Quintela‐Varela, Hugo, Jamieson, Cooper S, Shao, Qianzhen, Houk, KN, and Trauner, Dirk
- Subjects
Organic Chemistry ,Chemical Sciences ,Theoretical and Computational Chemistry ,Biological Products ,Cyclization ,Cycloaddition Reaction ,Density Functional Theory ,Electrochemical Techniques ,Models ,Molecular ,Polyenes ,Pyrrolidinones ,Pyrrolizidine Alkaloids ,Stereoisomerism ,biomimetic synthesis ,Diels-Alder cycloaddition ,electrocyclization ,tetramic acids ,total synthesis ,Chemical sciences - Abstract
The combination of electrocyclizations and cycloadditions accounts for the formation of a range of fascinating natural products. Cascades consisting of 8π electrocyclizations followed by a 6π electrocyclization and a cycloaddition are relatively common. We now report the synthesis of the tetramic acid PF-1018 through an 8π electrocyclization, the product of which is immediately intercepted by a Diels-Alder cycloaddition. The success of this pericyclic cascade was critically dependent on the substitution pattern of the starting polyene and could be rationalized through DFT calculations. The completion of the synthesis required the instalment of a trisubstituted double bond by radical deoxygenation. An unexpected side product formed through 4-exo-trig radical cyclization could be recycled through an unprecedented triflation/fragmentation.
- Published
- 2020
45. Synthesis and Investigation of the Abiotic Formation of Pyonitrins A–D
- Author
-
Shingare, Rahul D, Aniebok, Victor, Lee, Hsiau-Wei, and MacMillan, John B
- Subjects
Biotechnology ,Antifungal Agents ,Candida albicans ,Magnetic Resonance Spectroscopy ,Microbial Sensitivity Tests ,Molecular Structure ,Pseudomonas ,Stereoisomerism ,Thiazoles ,Chemical Sciences ,Organic Chemistry - Abstract
Pyonitrins A-D are recently isolated natural products from the insect-associated Pseudomonas protegens strain, which were isolated from complex fractions that exhibited antifungal activity via an in vivo murine candidiasis assay. Genomic studies of Pseudomonas protegens suggested that pyonitrins A-D are formed via a spontaneous nonenzymatic reaction between biosynthetic intermediates of two well-known natural products pyochelin and pyrrolnitrin. Herein we have accomplished the first biomimetic total synthesis of pyonitrins A-D in three steps and studied the nonenzymatic formation of the pyonitrins using 15N NMR spectroscopy.
- Published
- 2020
46. A Nanovessel-Catalyzed Three-Component Aza-Darzens Reaction
- Author
-
Bierschenk, Stephen M, Bergman, Robert G, Raymond, Kenneth N, and Toste, F Dean
- Subjects
Macromolecular and Materials Chemistry ,Organic Chemistry ,Chemical Sciences ,Aza Compounds ,Catalysis ,Molecular Structure ,Stereoisomerism ,General Chemistry ,Chemical sciences ,Engineering - Abstract
It has been previously demonstrated that nanovessels can be highly competent catalysts providing high rate accelerations and unique selectivity to the organic transformations which they mediate. However, for supramolecular assemblies to be considered a standard reagent in organic synthesis they must first demonstrate the ability to catalyze increasingly complex transformations. Herein, we report a three-component Aza-Darzens reaction that generates N-phenylaziridines, catalyzed by a supramolecular host, that provides the stereoisomer opposite to the one generated in bulk solution (trans vs cis). This transformation constitutes a rare catalytic three-component coupling within a supramolecular assembly, providing a supramolecular solution to a synthetically challenging transformation.
- Published
- 2020
47. Lessons in Strain and Stability: Enantioselective Synthesis of (+)‐[5]‐Ladderanoic Acid
- Author
-
Hancock, Erin N, Kuker, Erin L, Tantillo, Dean J, and Brown, M Kevin
- Subjects
Organic Chemistry ,Chemical Sciences ,Biological Products ,Carboxylic Acids ,Cyclobutanes ,Drug Stability ,Stereoisomerism ,copper ,cycloaddition ,natural products ,reaction mechanisms ,strained molecules ,Chemical sciences - Abstract
The synthesis of structurally complex and highly strained natural products provides unique challenges and unexpected opportunities for the development of new reactions and strategies. Herein, the synthesis of (+)-[5]-ladderanoic acid is reported. En route to the target, unusual and unexpected strain release driven transformations were uncovered. This occurrence required a drastic revision of the synthetic design that ultimately led to the development of a novel stepwise cyclobutane assembly by an allylboration/Zweifel olefination sequence.
- Published
- 2020
48. Programmable meroterpene synthesis
- Author
-
Shen, Xingyu, Ting, Chi P, Xu, Gong, and Maimone, Thomas J
- Subjects
Organic Chemistry ,Chemical Sciences ,Infectious Diseases ,Biosynthetic Pathways ,Monoterpenes ,Oxidation-Reduction ,Stereoisomerism ,Terpenes - Abstract
The bicyclo[3.3.1]nonane architecture is a privileged structural motif found in over 1000 natural products with relevance to neurodegenerative disease, bacterial and parasitic infection, and cancer among others. Despite disparate biosynthetic machinery, alkaloid, terpene, and polyketide-producing organisms have all evolved pathways to incorporate this carbocyclic ring system. Natural products of mixed polyketide/terpenoid origins (meroterpenes) are a particularly rich and important source of biologically active bicyclo[3.3.1]nonane-containing molecules. Herein we detail a fully synthetic strategy toward this broad family of targets based on an abiotic annulation/rearrangement strategy resulting in a 10-step total synthesis of garsubellin A, an enhancer of choline acetyltransferase and member of the large family of polycyclic polyprenylated acylphloroglucinols. This work solidifies a strategy for making multiple, diverse meroterpene chemotypes in a programmable assembly process involving a minimal number of chemical transformations.
- Published
- 2020
49. An enzymatic platform for the asymmetric amination of primary, secondary and tertiary C(sp3)–H bonds
- Author
-
Yang, Yang, Cho, Inha, Qi, Xiaotian, Liu, Peng, and Arnold, Frances H
- Subjects
Inorganic Chemistry ,Organic Chemistry ,Chemical Sciences ,Amination ,Biocatalysis ,Cytochrome P-450 Enzyme System ,Escherichia coli ,Models ,Molecular ,Molecular Structure ,Stereoisomerism ,Chemical sciences - Abstract
The ability to selectively functionalize ubiquitous C-H bonds streamlines the construction of complex molecular architectures from easily available precursors. Here we report enzyme catalysts derived from a cytochrome P450 that use a nitrene transfer mechanism for the enantioselective amination of primary, secondary and tertiary C(sp3)-H bonds. These fully genetically encoded enzymes are produced and function in bacteria, where they can be optimized by directed evolution for a broad spectrum of enantioselective C(sp3)-H amination reactions. These catalysts can aminate a variety of benzylic, allylic and aliphatic C-H bonds in excellent enantioselectivity with access to either antipode of product. Enantioselective amination of primary C(sp3)-H bonds in substrates that bear geminal dimethyl substituents furnished chiral amines that feature a quaternary stereocentre. Moreover, these enzymes enabled the enantioconvergent transformation of racemic substrates that possess a tertiary C(sp3)-H bond to afford products that bear a tetrasubstituted stereocentre, a process that has eluded small-molecule catalysts. Further engineering allowed for the enantioselective construction of methyl-ethyl stereocentres, which is notoriously challenging in asymmetric catalysis.
- Published
- 2019
50. Calyciphylline B‑type Alkaloids: Evolution of a Synthetic Strategy to (−)-Daphlongamine H
- Author
-
Hugelshofer, Cedric L, Palani, Vignesh, and Sarpong, Richmond
- Subjects
Organic Chemistry ,Chemical Sciences ,Alkaloids ,Chemistry Techniques ,Synthetic ,Polycyclic Compounds ,Stereoisomerism ,Medicinal and Biomolecular Chemistry ,Medicinal and biomolecular chemistry ,Organic chemistry - Abstract
We provide a full account of our synthetic studies targeting the hexacyclic calyciphylline B-type alkaloids, a subfamily of the Daphniphyllum natural products. Following an initial set of synthetic strategies focused on constructing the piperidine core of the calyciphylline B-type framework via a 6π-azaelectrocyclization, as well as exploiting the reactivity of underexplored oxazaborinine heterocycles, we ultimately designed a highly functionalized acyclic precursor which underwent carefully orchestrated and efficient cyclizations to forge the architecturally complex natural product scaffold. Our efforts have culminated in the development of the first total synthesis of (-)-daphlongamine H, provided access to its C5-epimer, (-)-isodaphlongamine H, and led to structural revision of deoxyisocalyciphylline B.
- Published
- 2019
Catalog
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