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Persistent organic and inorganic pollutants are among the most concerning pollutants in Australian estuaries due to their persistent, ubiquitous, and potentially toxic nature. Traditional methods of soil remediation often fall short of practical implementation due to high monetary investment, environmental disturbance, and potential for re-contamination. Phytoremediation is gaining traction as an alternative, or synergistic mechanism of contaminated soil remediation. Phytoremediation utilises plants and associated rhizospheric microorganisms to stabilise, degrade, transform, or remove xenobiotics from contaminated mediums. Due to their apparent cross-tolerance to salt, metals, and organic contaminants, halophytes have shown promise as phytoremediation species. This review examines the potential of 93 species of Australian saltmarsh halophytes for xenobiotic phytoremediation. Considerations for the practical application of phytoremediation in Australia are discussed, including mechanisms of enhancement, and methods of harvesting and disposal. Knowledge gaps for the implementation of phytoremediation in Australian saline environments are identified, and areas for future research are suggested.

The Sundarbans is the largest single-mass mangrove forest in the world, experiencing environmental and anthropogenic stress from metal(loid) inputs. We undertook a comprehensive assessment of sediment contamination and ecological risks posed by metal(loid)s in the Sundarbans using previously published data. There was a distinct difference in metal(loid) content, pollution level and ecological risk in Bangladeshi and Indian parts of the Sundarbans, with the Indian counterpart experiencing relatively higher metal(loid) pollution. The higher pollution level in India might be attributed to its vicinity to municipal and industrial areas that act the primary source of metal(loid)s in the Sundarbans. The cumulative ecological risks of metal(loid)s pointed out that the south-eastern part of Bangladeshi Sundarbans and north-eastern Indian part are at moderate ecological risk. This research will provide valuable data to inform the responsible authorities and will underpin future policies and management to reduce future metal(loid) inputs in the Sundarbans.

This study examined the accumulation of As species, Se, Cu, Zn, Cd and Pb in the halophyte Juncus acutus, collected from three anthropogenically impacted estuaries in NSW, Australia. As concentration ranged from 4 to 22 μg/g at Georges River, 2-16 μg/g at Lake Macquarie and 6 μg/g at Hunter Estuary. Inorganic As was accumulated mainly in roots with low translocation to culm with a greater abundance of AsV. However, AsIII (TF = 0.32) showed greater mobility from the roots to shoots than AsV (TF = 0.04), indicating a higher quantity of AsIII specific transporter assemblages in the plasmalemma of the endodermis or cytoplasmic reduction of AsV to AsIII in culms. Metal(loid)s, including As (90%), were predominantly in root tissues and very limited translocation to culm, indicating the species is a useful phytostabiliser. As and all other metal(loid)s in roots were correlated with sediment loads (p 0.05, R

An impact assessment of oceanic effluent releases from Belmont wastewater treatment works (WWTW) in Newcastle, Australia, was undertaken. Benthic infaunal assemblages in sandy sediments of ~25 m water depth were examined, at sites adjacent to the release point, and at increasing distances up to 2 km in both a NE and SW direction over five consecutive years (2016-2020). Localised impacts were evident for infaunal assemblages, with sites within 20 m of the outfall ("Impact" site types) exhibiting lower taxa richness and Shannon diversity, higher abundances of polychaetes and/or nematodes, higher polychaete ratios, and shifts in assemblage composition in comparison to sites at greater distances during some years. Taxa with increased localised abundances at the outfall were identified as indicators for monitoring impacts, including deposit-feeding polychaetes (Families Polygordiidae, Paraonidae and Dorvilleidae) and Phylum Nematoda. Future infaunal monitoring could include molecular tools and paired sediment analyses.

Catchment degradation and exposure of acid sulphate soils can affect estuarine water quality, and this can have impacts on the health of estuarine species and adversely affect fishery productivity. In degraded catchments, aluminium (Al) is mobilised from clay minerals following oxidation of acid sulphate soils, and may be harmful to estuarine crustaceans. We tested the acute toxicity and sub-lethal effects of Al for School Prawn (Metapenaeus macleayi), through a series of experiments conducted under normal (pH 8) and acidic (pH 5) conditions. Experimental data were used to examine mortality. Also, histological examination of the gills and hepatopancreas was conducted to determine pathological consequences of exposure to these stressors. School Prawn did not experience mortality in response to acute exposure to Al under normal pH conditions, but mortality and tissue bioaccumulation of Al was greater under acidic conditions, suggesting an interactive effect of both stressors. Histology revealed sub-lethal effects of Al including structural abnormalities in the gills and hepatopancreas, and evidence of viral infection and immune response, particularly at lower pH and higher Al concentrations. These impacts may impede major vital functions such as respiration, osmotic regulation, metabolism and growth of juvenile School Prawn, which could contribute to productivity bottlenecks in degraded estuaries.

We examined the patterns of uptake and partitioning of metal(loid)s in Suaeda australis from three highly urbanised estuaries (Sydney Olympic Park, Hunter Wetlands and Lake Macquarie) in NSW, Australia. Of these, Sydney Olympic Park was found to be the most contaminated estuary in terms of combined sediment metal(loid) load, followed by Hunter Wetlands and lowest in Lake Macquarie (via PERMANOVA). Uptake in roots was greater for the essential metals Cu and Zn along with the non-essential metal Cd and the metalloid Se (root BCFs1) and lower for Pb and As (root BCFs1). Substantial barriers for translocation from roots to stems were identified for all metal(loid)s (stem TFs; 0.07-0.68). Conversely, unrestricted flow from stems to leaves was observed for all metal(loid)s at unity or higher (leaf TFs ≥ 1). Strong linear relationships between sediment and root for Zn and Pb were observed, indicating roots as a useful bioindicator.

An investigation was conducted over three estuaries in SE Australia with a gradient in metal(loid) contamination to assess metal(loid) (Cu, Zn, As, Se, Cd and Pb) accumulation and transport within the halophytic saltmarsh rush, Juncus kraussii. Sydney Olympic Park exhibited the most elevated metal(loid) contamination, followed by Hunter Wetlands and Lake Macquarie. J. kraussii exhibited a strong ability to restrict metal(loid) movement into the root system, with the exception of cadmium (BCFs 1.0) and unrestricted flow from root to culm excepting Se, Cd (TFs 1). Pb and Zn exhibited elevated translocation between roots and culms (TF 4.4 and 7.3, respectively). Despite barriers for uptake into the below-ground tissues, most metal(loid)s were accumulated to the roots with environmental dose (except for Cu and Cd) and linear relationships were present between the root and culm (for As and Se) and the sediment and culm (for As, Se, Cd, and Pb).

Microplastics are an emerging contaminant in aquatic environments. Information on the occurrence and characteristics of microplastics in Australia is limited and their interactions with chemical contaminants have not been addressed. Therefore, the aim of this study was to generate baseline information on the physical and chemical characteristics of microplastics on Australian shorelines to facilitate further detailed risk assessment. Field collected microplastics were categorised by colour, shape and polymer type. Plastic particles were primarily clear, blue, white and green and consisted mainly of fragments (57.80%) and pellets (30.68%). Polymer characterisation revealed that shoreline microplastics were polyethylene (53.17%), polypropylene (35.17%), polystyrene (6.61%) and polyethylene terephthalate (1.85%). Analysis of metal(loid)s found that concentrations of Mn, Cr, Cu, As, Zn and Pb were significantly higher on microplastics associated with industrial locations compared with other land uses, indicating that aged microplastics have the potential to adsorb toxic metals and that metals levels may be location-dependent.

The metal-binding protein metallothionein (MT) is widely used as a biomarker of metal contamination. In this study, we cloned a MT gene (sgMT) from the Sydney rock oyster Saccostrea glomerata. The gene encodes a MT-I protein with a classical αβ domain structure and is expressed as two transcripts resulting from alternative polyadenylation. The gene promoter contains two putative metal-responsive elements (MREs) which are known to be required for metal-inducible transcription. A specific and efficient qPCR assay was developed to quantify sgMT mRNA expression. Further, we assessed whether prior metal exposure history influences sgMT mRNA expression upon subsequent metal exposure. Oysters with varying prior metal exposure histories (contaminated and reference) were exposed to Cu, Cd and Zn. Expression of sgMT generally increased with metal dose, and oysters with an elevated past metal exposure history exhibited higher sgMT expression under Cd and Zn stress, representing a potential acclimatory response to prior metal exposure.

We aimed to determine if offspring of oysters from contaminated locations were more tolerant to metals, and whether this tolerance could be attributed to acclimation. Oysters from 10 estuaries were sampled, representing a gradient in metal contamination. Tolerance to metals of the F1 offspring from adults residing in these estuaries was assessed. Then, adults from these estuaries were translocated to a single estuary and their offspring tolerance reassessed. No linear relationship was found between the Cu concentrations of adults and their offspring's tolerance to Cu. A positive linear relationship was found between the Zn concentration of adults and the Zn EC50's of their offspring. Zn tolerance was lost after translocation. Zn EC50 values of offspring from transplanted adults bore no relation to the Zn EC50's of their location of origin. Thus the initial tolerance observed could be attributed to acclimation transferred to the F1 generation.

The pearl oyster (Pinctada maxima) aquaculture industry in the Kimberley region of Western Australia has been established for decades. However, investigation of benthic sediments and macrobenthic communities within pearl farms for this region has not taken place until now. Pearl oysters may have the potential to foul the benthic layer under the farms through the deposition of feces and pseudo-feces from the cultured oysters and fouling organisms, and the fallout of debris from the longlines that suspend the pearl oysters. This organic waste and debris can accumulate in the sediments below the oyster longlines and potentially lead to organic enrichment and even eutrophication. Other aquacultures (such as some finfish and other shellfish) have caused eutrophication of marine sediments and a concurrent change in benthic macrofauna. For two years we sampled the sediments below three P. maxima pearl oyster farms in remote regions of the Kimberley coast. Sediment core samples were taken to measure physico-chemical variables (redox potential, nutrients loads and total organic matter) while grab samples collected the benthic macrofauna (> 1 mm in size). Each farm was compared to four control locations (total = 12 control locations) within the same region. At all three pearl farms there was no indication of eutrophication (nutrient enrichment). We concluded that the variability in benthic physico-chemistry beneath pearl farms was within the bounds of natural variability at reference locations. There were also no consistent differences in the benthic macrofauna assemblages below the pearl oyster farms when compared to control locations. There was considerable natural variability of the benthic macrofauna among all locations, but especially among the reference locations. The reference locations were as different from one another as they were from the farm locations, indicating that the diversity of benthic macrofauna taxa, and their relative abundances within sediments underlying the farms fell within the range of natural variability found at these spatial scales. The importance of robust assessment of potential environmental impact of aquaculture facilities is stressed.

Alterations in the glutathione antioxidant system and lipid peroxidation in Avicennia marina were studied under laboratory and field conditions. The activity of glutathione peroxidase (GPx) was found to respond to Zn exposure, and a significant positive relationship between leaf Zn concentration and GPx activity was observed after 96 h and 8 weeks. Lipid hydroperoxides increased proportionally with increasing leaf Zn concentration after 2 and 8 weeks, while no changes in total glutathione were observed. Induction of GPx at 96 h predicted effects at the individual level at a later time interval (reduced biomass at 8 weeks). Results from the field revealed that increasing leaf metal concentration (Zn, Cu or Pb) produced a proportional increase in GPx activity whereas lipid hydroperoxides and total glutathione were not affected. The utility of GPx as an early warning biomarker is suggested, since GPx activity increases in a dose-dependant fashion in response to accumulated leaf metals, and is predictive of later effects on growth.

Mangroves have been observed to possess a tolerance to high levels of heavy metals, yet accumulated metals may induce subcellular biochemical changes, which can impact on processes at the organism level. Six month-old seedlings of the grey mangrove, Avicennia marina (Forsk.) Vierh, were exposed to a range of Cu (0-800 micrograms/g), Pb (0-800 micrograms/g) and Zn (0-1000 micrograms/g) concentrations in sediments under laboratory conditions, to determine leaf tissue metal accumulation patterns, effects on photosynthetic pigments (chlorophyll a, chlorophyll b and carotenoids), and the activity of the antioxidant enzyme peroxidase. Limited Cu uptake to leaves was observed at low sediment Cu levels, with saturation and visible toxicity to Cu at sediment levels greater than 400 micrograms/g. Leaf Pb concentrations remained low over a range of Pb sediment concentrations, up to 400 micrograms/g Pb, above which it appeared that unrestricted transport of Pb occurred, although no visible signs of Pb toxicity were observed. Zn was accumulated linearly with sediment zinc concentration, and visible toxicity occurring at the highest concentration, 1000 micrograms/g Zn. Significant increases in peroxidase activity and decreases in photopigments were found with Cu and Zn at concentrations lower than those inducing visible toxicity. Significant increases in peroxidase activity only, were found when plants were exposed to Pb. Positive linear relationships between peroxidase activity and leaf tissue metal concentrations were found for all metals. Significant linear decreases in photosynthetic pigments with increasing leaf tissue metal concentrations were observed with Cu and Zn only. Photosynthetic pigments and peroxidase activity may be applicable as sensitive biological indicators of Cu and Zn stress, and peroxidase activity for Pb stress in A. marina.

Macrobenthic community assemblage diversity and abundance were monitored on both Cowan and Berowra Creeks in the estuarine reaches of the Hawkesbury River, Sydney Australia during 1997-1998. Natural sediment physicochemical differences were assessed, along with low-level anthropogenic contaminants including copper, lead, zinc, phosphorus and nitrogen. Contaminant levels at all sites were below sediment guideline values for biological effects. Natural physicochemical sediment differences were the main determinants in species assemblage patterns among sites. Three groupings of sites with similar assemblages were observed during February 1998. Berowra Creek sites, which were higher in organic content and silt/clay (and thus metals and nutrients), higher in pH and lower in salinity, were similar in terms of contributions by the polychaetes Ceratoneresis aequisetis, Scoloplos normalis, the isopod Cyathura hakea and the bivalve mollusc Soletellina alba. Sites on upper Cowan Creek, higher in organic content, silt/clay (nutrients and metals) and lower in salinity, were similar and separated from other sites in terms of the polychaete Carazziella victoriensis and the gastropod mollusc Nassarius jonasii. Sites lower in Cowan Creek, tended to be higher in sand content, more saline and lower in organic content and thus nutrient and metal concentrations. These sites were similar in terms of contributions of the polychaete Sigalion bandaensis and the bivalve molluscs, Mysella vitrea and Tellina deltoidalis. The biotic assemblage patterns were not maintained temporally, suggesting the importance of monitoring over time to assess possible future impacts. Aggregating species data to the family level resulted in similar site discrimination. Site differences were less distinct at higher taxonomic levels and suggests future monitoring at the family level is sufficient to detect assemblage differences among sites. The results obtained represent the difficulty in detecting responses to low-level contamination at the community level, and provide a sound anticipatory baseline for the assessment of future possible anthropogenic disturbance in the Hawkesbury River.

The New South Wales Olympic Co-ordination Authority, which is responsible for the redevelopment of the site for the Olympic Games 2000, Sydney, is committed to the rehabilitation of the remnant ecosystems remaining on the site. This paper describes a 3-year saltmarsh transplantation project, and resulting management approaches for the rehabilitation of other saline wetland areas on the site. Two series of cuttings (spring and autumn) were made, including three dominant species and three species rare in Sydney. It was found that all the species could be propagated without difficulty, but field survival and growth were much higher for the spring series than the autumn one. Measurement was also made of the colonisation of mangrove and saltmarsh species that occurred at the site over the course of the trials. New understandings of estuarine wetland colonisation have emerged, and the information has been used to develop methods of transplantation for other parts of the Olympic site, and to define management needs for monitoring success.

The Homebush Bay area, Sydney, site of the Olympic Games 2000, has been largely occupied for nearly a century by an abattoir, brickworks, armaments depot and waste dumps. However, it contains remnants of original ecosystems, including two estuarine wetlands, and the Olympic Co-ordination Authority (OCA), set up to manage the redevelopment of the site, is committed to the rehabilitation of these ecosystems. The ecological approaches and rehabilitation measures used for one of the wetlands are detailed. Apart from a history of disturbance, it has for 10 years been without tidal flushing. However, these wetlands are the largest remaining in the Sydney estuary, and are significant for a number of reasons including biodiversity and waterbird conservation. The ecological parameters of the site, the results of a `before-restoration-impact' study, and the iterative links between science and management in the introduction of the rehabilitation measures, are presented. Criteria for success are discussed, along with biomonitoring strategies to test success.

The use of pearl oysters has recently been proposed as an environmental remediation tool in coastal ecosystems. This study quantified the nitrogen, phosphorus and heavy metal content of the tissue and shell of pearl oysters harvested from a small pearl oyster farm at Port Stephens, Australia. Each tonne of pearl oyster material harvested resulted in approximately 703 g metals, 7452 g nitrogen, and 545 g phosphorus being removed from the waters of Port Stephens. Increasing current farm production of 9.8 tyr(-1) to 499 tyr(-1) would balance current nitrogen loads entering Port Stephens from a small Sewage Treatment Plant (STP) located on its southern shores. Furthermore, manipulation of harvest dates to coincide with oyster condition would likely remove substantially greater quantities of nutrients. This study demonstrates that pearl aquaculture may be used to assist in the removal of pollutants from coastal waters while producing a commercially profitable commodity.

The effects of three heavy metals Copper (Cu), lead (Pb) and zinc (Zn), and the interaction of an essential (Zn) and non-essential (Pb) metal on germination, growth, and accumulation of metals in the grey mangrove, Avicennia marina (Forsk.) Vierh var. australasica (Walp.) Moldenke, were studied under laboratory conditions. Avicennia marina was found to be highly tolerant to the metals applied. Copper was accumulated in root tissue in a linear relationship at lower sediment concentrations, but at concentrations of 200 microg/g and higher, no further increases in root Cu levels occurred. Translocation of Cu from the root to leaf tissue was low, yet revealed similar accumulation patterns as root tissue. Significant reductions in seedling height leaf number and area were found with significant increases in Cu concentrations in tissues at 100 microg/g sediment Cu. At Cu sediment levels of 400 microg/g, a decrease in total biomass and root growth inhibition was observed. Emergence was retarded with increasing copper concentration, with 800 microg/g sediment Cu resulting in a total inhibition of emergence. The LC50 for emergence and EC50 for biomass was 566 and 380 microg/g Cu respectively. Lead accumulation in root tissue was lower that other metals, yet increased in a dose dependant fashion across the sediment Pb concentration range examined. Lead was excluded from leaf tissue at Pb sediment concentrations up to 400 microg/g, above which limited transport of Pb occurred. Little negative effects on growth were observed due to the low accumulation of Pb. Zinc uptake was high, and was accumulated in a linear fashion in root tissue across the sediment Zn concentration range applied. Zinc translocation to leaf tissue exhibited a dose dependant relationship with both root and sediment Zn levels. Emergence decreased with increasing sediment Zn concentrations, with 1000 microg/g sediment Zn showing 100% mortality. Significant reductions in seedling height, leaf number, area, biomass and root growth inhibition were found at concentrations of 500 microg/g sediment Zn. The LC50 for emergence and EC50 for biomass was 580 and 392 microg/g Zn respectively. Lead and Zn in combination resulted in an increased accumulation of both metals in leaf tissue and increased toxicity than individual metals alone, and is the first noted occurrence of a Pb and Zn additive response in angiosperms. Possible mechanisms of accumulation and toxicity are discussed.

Retrieving burrowing shore crabs to obtain information regarding their morphological attributes is often difficult and results in significant disturbance and habitat modification. A simple, rapid and non-destructive sampling method was proposed for indirectly estimating crab abundance, morphology and mass through the counting of burrow numbers and their diameter. Measurement of the number of crab burrows was found to correlate with crab abundance via both excavation and video observation techniques. Burrow diameters of individuals were also correlated with carapace width and body mass. Measuring burrow opening diameters along with the number of holes allows an indirect estimate of morphology and mass, which increases the information gained through such rapid sampling techniques and allows assessment of both structural and functional processes at the population level which may be affected through anthropogenic disturbance.

The importance of estuarine wetlands to ecosystem services such as primary productivity and flood attenuation, as well as their function as habitat for threatened species has prompted efforts to restore tidal flows to degraded wetlands. We tracked the response of estuarine vegetation to tidal-flow reinstatement over 12 years (1995–2007) in a wetland of the Hunter estuary, Australia. This site provides important habitat for migratory shorebird species, which favour shallow tidal pools and saltmarsh over mangrove forest. Increased tidal flows following culvert removal reduced shorebird roost habitat by 17% because of mangrove encroachment on saltmarsh and shallow tidal pools. Saltmarsh occurred in areas with a spring tidal range 0.4 above the Australian height datum (mAHD), whereas mangrove occupied areas with spring tidal range >0.3 m, hydroperiod