9 results on '"Ma, Dengke K."'
Search Results
2. Neuronal activity modifies the DNA methylation landscape in the adult brain.
- Author
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Guo JU, Ma DK, Mo H, Ball MP, Jang MH, Bonaguidi MA, Balazer JA, Eaves HL, Xie B, Ford E, Zhang K, Ming GL, Gao Y, and Song H
- Subjects
- Animals, Chromosome Mapping methods, CpG Islands genetics, CpG Islands physiology, Epigenomics methods, Gene Expression Regulation genetics, Gene Expression Regulation physiology, Genomics methods, Mice, Molecular Sequence Data, Motor Activity genetics, Physical Conditioning, Animal, Statistics as Topic, DNA Methylation physiology, Hippocampus cytology, Hippocampus physiology, Neurons physiology
- Abstract
DNA methylation has been traditionally viewed as a highly stable epigenetic mark in postmitotic cells. However, postnatal brains appear to show stimulus-induced methylation changes, at least in a few identified CpG dinucleotides. How extensively the neuronal DNA methylome is regulated by neuronal activity is unknown. Using a next-generation sequencing-based method for genome-wide analysis at single-nucleotide resolution, we quantitatively compared the CpG methylation landscape of adult mouse dentate granule neurons in vivo before and after synchronous neuronal activation. About 1.4% of 219,991 CpGs measured showed rapid active demethylation or de novo methylation. Some modifications remained stable for at least 24 h. These activity-modified CpGs showed a broad genomic distribution with significant enrichment in low-CpG density regions, and were associated with brain-specific genes related to neuronal plasticity. Our study implicates modification of the neuronal DNA methylome as a previously underappreciated mechanism for activity-dependent epigenetic regulation in the adult nervous system., (© 2011 Nature America, Inc. All rights reserved.)
- Published
- 2011
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3. Epigenetic choreographers of neurogenesis in the adult mammalian brain.
- Author
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Ma DK, Marchetto MC, Guo JU, Ming GL, Gage FH, and Song H
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- Animals, Brain Neoplasms genetics, Brain Neoplasms physiopathology, Cell Differentiation, DNA Methylation, Humans, Mental Disorders genetics, Mental Disorders pathology, Mental Disorders physiopathology, Models, Biological, Stem Cells physiology, Brain cytology, Brain embryology, Brain growth & development, Epigenesis, Genetic, Neurogenesis physiology, Neurons physiology
- Abstract
Epigenetic mechanisms regulate cell differentiation during embryonic development and also serve as important interfaces between genes and the environment in adulthood. Neurogenesis in adults, which generates functional neural cell types from adult neural stem cells, is dynamically regulated by both intrinsic state-specific cell differentiation cues and extrinsic neural niche signals. Epigenetic regulation by DNA and histone modifiers, non-coding RNAs and other self-sustained mechanisms can lead to relatively long-lasting biological effects and maintain functional neurogenesis throughout life in discrete regions of the mammalian brain. Here, we review recent evidence that epigenetic mechanisms carry out diverse roles in regulating specific aspects of adult neurogenesis and highlight the implications of such epigenetic regulation for neural plasticity and disorders.
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- 2010
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4. Adult neural stem cells in the mammalian central nervous system.
- Author
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Ma DK, Bonaguidi MA, Ming GL, and Song H
- Subjects
- Brain pathology, Brain physiology, Cell Differentiation, Humans, Neurogenesis, Neuronal Plasticity, Adult Stem Cells physiology, Central Nervous System cytology, Neurons physiology
- Abstract
Neural stem cells (NSCs) are present not only during the embryonic development but also in the adult brain of all mammalian species, including humans. Stem cell niche architecture in vivo enables adult NSCs to continuously generate functional neurons in specific brain regions throughout life. The adult neurogenesis process is subject to dynamic regulation by various physiological, pathological and pharmacological stimuli. Multipotent adult NSCs also appear to be intrinsically plastic, amenable to genetic programing during normal differentiation, and to epigenetic reprograming during de-differentiation into pluripotency. Increasing evidence suggests that adult NSCs significantly contribute to specialized neural functions under physiological and pathological conditions. Fully understanding the biology of adult NSCs will provide crucial insights into both the etiology and potential therapeutic interventions of major brain disorders. Here, we review recent progress on adult NSCs of the mammalian central nervous system, including topics on their identity, niche, function, plasticity, and emerging roles in cancer and regenerative medicine.
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- 2009
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5. Neuronal activity-induced Gadd45b promotes epigenetic DNA demethylation and adult neurogenesis.
- Author
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Ma DK, Jang MH, Guo JU, Kitabatake Y, Chang ML, Pow-Anpongkul N, Flavell RA, Lu B, Ming GL, and Song H
- Subjects
- Animals, Brain-Derived Neurotrophic Factor genetics, Cell Proliferation, Cells, Cultured, DNA metabolism, Dendrites physiology, Dendrites ultrastructure, Dentate Gyrus cytology, Dentate Gyrus physiology, Electroshock, Fibroblast Growth Factor 1 genetics, Gene Expression Profiling, Genes, Immediate-Early, Hippocampus cytology, Mice, Mice, Knockout, Physical Exertion, Stem Cells cytology, Stem Cells physiology, Transcriptional Activation, Antigens, Differentiation genetics, Antigens, Differentiation metabolism, DNA Methylation, Epigenesis, Genetic, Hippocampus physiology, Neurogenesis, Neurons physiology
- Abstract
The mammalian brain exhibits diverse types of neural plasticity, including activity-dependent neurogenesis in the adult hippocampus. How transient activation of mature neurons leads to long-lasting modulation of adult neurogenesis is unknown. Here we identify Gadd45b as a neural activity-induced immediate early gene in mature hippocampal neurons. Mice with Gadd45b deletion exhibit specific deficits in neural activity-induced proliferation of neural progenitors and dendritic growth of newborn neurons in the adult hippocampus. Mechanistically, Gadd45b is required for activity-induced DNA demethylation of specific promoters and expression of corresponding genes critical for adult neurogenesis, including brain-derived neurotrophic factor and fibroblast growth factor. Thus, Gadd45b links neuronal circuit activity to epigenetic DNA modification and expression of secreted factors in mature neurons for extrinsic modulation of neurogenesis in the adult brain.
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- 2009
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6. G9a and Jhdm2a regulate embryonic stem cell fusion-induced reprogramming of adult neural stem cells.
- Author
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Ma DK, Chiang CH, Ponnusamy K, Ming GL, and Song H
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- Animals, DNA Methylation, Epigenesis, Genetic, Genome, Green Fluorescent Proteins metabolism, Humans, Jumonji Domain-Containing Histone Demethylases, Mice, Octamer Transcription Factor-3 metabolism, Transcription, Genetic, Transgenes, Embryonic Stem Cells cytology, Histocompatibility Antigens physiology, Histone-Lysine N-Methyltransferase physiology, Neurons metabolism, Oxidoreductases, N-Demethylating physiology, Stem Cells cytology
- Abstract
Somatic nuclei can be reprogrammed to pluripotency through fusion with embryonic stem cells (ESCs). The underlying mechanism is largely unknown, primarily because of a lack of effective approaches to monitor and quantitatively analyze transient, early reprogramming events. The transcription factor Oct4 is expressed specifically in pluripotent stem cells, and its reactivation from somatic cell genome constitutes a hallmark for effective reprogramming. Here we developed a double fluorescent reporter system using engineered ESCs and adult neural stem cells/progenitors (NSCs) to simultaneously and independently monitor cell fusion and reprogramming-induced reactivation of transgenic Oct4-enhanced green fluorescent protein (EGFP) expression. We demonstrate that knockdown of a histone methyltransferase, G9a, or overexpression of a histone demethylase, Jhdm2a, promotes ESC fusion-induced Oct4-EGFP reactivation from adult NSCs. In addition, coexpression of Nanog and Jhdm2a further enhances the ESC-induced Oct4-EGFP reactivation. Interestingly, knockdown of G9a alone in adult NSCs leads to demethylation of the Oct4 promoter and partial reactivation of the endogenous Oct4 expression from adult NSCs. Our results suggest that ESC-induced reprogramming of somatic cells occurs with coordinated actions between erasure of somatic epigenome and transcriptional resetting to restore pluripotency. These mechanistic findings may guide more efficient reprogramming for future therapeutic applications of stem cells. Disclosure of potential conflicts of interest is found at the end of this article.
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- 2008
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7. Disrupted-In-Schizophrenia 1 regulates integration of newly generated neurons in the adult brain.
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Duan X, Chang JH, Ge S, Faulkner RL, Kim JY, Kitabatake Y, Liu XB, Yang CH, Jordan JD, Ma DK, Liu CY, Ganesan S, Cheng HJ, Ming GL, Lu B, and Song H
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- Action Potentials, Animals, Carrier Proteins genetics, Carrier Proteins metabolism, Cell Differentiation, Cell Lineage, Cell Movement, Cell Proliferation, Cell Size, Dendrites metabolism, Dentate Gyrus metabolism, Dentate Gyrus pathology, Genetic Vectors, Genotype, Hippocampus embryology, Hippocampus growth & development, Hippocampus pathology, Mice, Mice, Inbred C57BL, Morphogenesis, Nerve Tissue Proteins deficiency, Nerve Tissue Proteins genetics, Neurons pathology, Phenotype, RNA Interference, RNA, Small Interfering metabolism, Recombinant Fusion Proteins metabolism, Retroviridae genetics, Schizophrenia genetics, Schizophrenia physiopathology, Stem Cells pathology, Synapses pathology, Synaptic Transmission, Time Factors, Hippocampus metabolism, Nerve Tissue Proteins metabolism, Neurons metabolism, Schizophrenia metabolism, Stem Cells metabolism, Synapses metabolism
- Abstract
Adult neurogenesis occurs throughout life in discrete regions of the adult mammalian brain. Little is known about the mechanism governing the sequential developmental process that leads to integration of new neurons from adult neural stem cells into the existing circuitry. Here, we investigated roles of Disrupted-In-Schizophrenia 1 (DISC1), a schizophrenia susceptibility gene, in adult hippocampal neurogenesis. Unexpectedly, downregulation of DISC1 leads to accelerated neuronal integration, resulting in aberrant morphological development and mispositioning of new dentate granule cells in a cell-autonomous fashion. Functionally, newborn neurons with DISC1 knockdown exhibit enhanced excitability and accelerated dendritic development and synapse formation. Furthermore, DISC1 cooperates with its binding partner NDEL1 in regulating adult neurogenesis. Taken together, our study identifies DISC1 as a key regulator that orchestrates the tempo of functional neuronal integration in the adult brain and demonstrates essential roles of a susceptibility gene for major mental illness in neuronal development, including adult neurogenesis.
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- 2007
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8. Glial influences on neural stem cell development: cellular niches for adult neurogenesis.
- Author
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Ma DK, Ming GL, and Song H
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- Animals, Cell Differentiation physiology, Cell Lineage physiology, Cell Movement physiology, Cell Proliferation, Central Nervous System cytology, Humans, Central Nervous System growth & development, Nerve Regeneration physiology, Neuroglia cytology, Neurons cytology, Stem Cells cytology
- Abstract
Neural stem cells continually generate new neurons in very limited regions of the adult mammalian central nervous system. In the neurogenic regions there are unique and highly specialized microenvironments (niches) that tightly regulate the neuronal development of adult neural stem cells. Emerging evidence suggests that glia, particularly astrocytes, have key roles in controlling multiple steps of adult neurogenesis within the niches, from proliferation and fate specification of neural progenitors to migration and integration of the neuronal progeny into pre-existing neuronal circuits in the adult brain. Identification of specific niche signals that regulate these sequential steps during adult neurogenesis might lead to strategies to induce functional neurogenesis in other brain regions after injury or degenerative neurological diseases.
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- 2005
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9. Activity-dependent Extrinsic Regulation of Adult Olfactory Bulb and Hippocampal Neurogenesis.
- Author
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Ma, Dengke K., Kim, Woon Ryoung, Ming, Guo‐li, and Song, Hongjun
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OLFACTORY receptors , *DEVELOPMENTAL neurobiology , *HIPPOCAMPUS (Brain) , *MAMMALS , *NEURONS - Abstract
The adult mammalian brain continuously generates new neurons in the olfactory bulb and hippocampus throughout life. Adult neurogenesis, a highly dynamic process, has been shown to be exquisitely modulated by neuronal circuit activity at different stages, from proliferation of adult neural progenitors, to differentiation, maturation, integration, and survival of newborn neurons in the adult brain. Strategic activity-dependent addition of new neurons into the existing neuronal circuitry represents a prominent form of structural plasticity and may contribute to specific brain functions, such as learning, memory, and mood modulation. Here we review extrinsic mechanisms through which adult neurogenesis is regulated by environmental cues, physiological learning-related stimuli, and neuronal activities. [ABSTRACT FROM AUTHOR]
- Published
- 2009
- Full Text
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