1. Exosomal long non-coding RNA MALAT1: a candidate of liquid biopsy in monitoring of Wilms' tumor.
- Author
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Sharma, Diwakar, Singh, Apoorv, Wilson, Christine, Swaroop, Priyanka, Kumar, Sachin, Yadav, Devendra K., Jain, Vishesh, Agarwala, Sandeep, Husain, Mohammad, and Sharawat, Surender K.
- Subjects
NEPHROBLASTOMA ,LINCRNA ,EXOSOMES ,EXTRACELLULAR vesicles ,RENAL cancer ,URINARY tract infections - Abstract
Purpose: Wilms' tumor (WT) is a rare kidney cancer that primarily affects children. Exosomes are extracellular vesicles that cargo nucleic acids, proteins,etc. for cellular communication. Long non-coding RNAs (lncRNAs) have utility as biomarkers for cancer diagnosis, prognosis, and disease monitoring. We hypothesize that expression of lncRNA, metastasis-associated lung adenocarcinoma transcript-1(MALAT1), is dysregulated and possibly trafficked within exosomes to influence the tissue microenvironment for metastasis and recurrence of WT. Methods: We investigated the expression of MALAT1 in thirty WT samples by qPCR. Exosomes were isolated using a precipitated and affinity-binding-based kit, and characterized using TEM, NTA, and DLS. Results: Mean number of exosomes was 9.01×10
8 /mL in primary culture, 1.64×108 /mL in urine, and 4.65×108 /plasma:400µl. Average yield of total RNA was 1.28µg (primary-culture supernatant:1ml), 1.47µg (Urine:1ml), 1.65µg (Plasma:400 µL). We quantified MALAT1 in exosomes derived from these sources in patients of WT. Expression of MALAT1 was significantly downregulated (p=0.008) in WT samples. Conclusion: This is the first study that demonstrated the presence of lncRNA MALAT1 in various invasive and non-invasive samples of patients with WT(primary tissue culture, urine, and plasma samples). [ABSTRACT FROM AUTHOR]- Published
- 2024
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