Search

Osmotic stress is a ubiquitous and potent stress for all living organisms, but few studies have investigated the genetic basis of salt tolerance in filamentous fungi. The main aim of this study was to identify regions of the genome associated with tolerance to potassium chloride (KCl) in the wheat pathogen Zymoseptoria tritici. A secondary aim was to identify candidate genes affecting salt tolerance within the most promising chromosomal regions. We achieved these aims with a quantitative trait locus (QTL) mapping study using offspring from 2 crosses grown in vitro in the presence or absence of osmotic stress imposed by 0.75 M KCl. We identified significant QTL for most of the traits in both crosses. Several QTLs overlapped with QTL identified in earlier studies for other traits, and some QTL explained trait variation in both the control and salt stress environments. A significant QTL on chromosome 3 explained variation in colony radius at 8-day postinoculation (dpi) in the KCl environment as well as colony radius KCl tolerance at 8 dpi. The QTL peak had a high logarithm of the odds ratio (LOD) and encompassed an interval containing only 36 genes. Six of these genes present promising candidates for functional analyses. A gene ontology (GO) enrichment analysis of QTL unique to the KCl environment found evidence for the enrichment of functions involved in osmotic stress responses. [ABSTRACT FROM AUTHOR]

Simple Summary: Plant resistance inducers, such as plant-growth-promoting rhizobacteria (PGPR), are among the most important alternatives to fungicides because they employ different modes of action, conferring protection against biotic and abiotic stresses while promoting plant growth. However, the loss of their efficacy under field conditions is a subject of debate and may be attributed to the influence of environmental factors, genetic diversity and native soil microbial communities. Additionally, the inoculation of plants with PGPR can impact the complex and dynamic balance of soil microbial communities. Recently, we published the efficiency of three PGPR in single and co-inoculation to induce wheat resistance mechanisms against Septoria leaf blotch and drought stress. Here, we investigated the interactions between PGPR and soil microbial communities. The efficiency of plant-growth-promoting rhizobacteria (PGPR) may not be consistently maintained under field conditions due to the influence of soil microbial communities. The present study aims to investigate their impact on three PGPR-based biofertilizers in wheat. We used the PGPR Paenibacillus sp. strain B2 (PB2), PB2 in co-inoculation with Arthrobacter agilis 4042 (Mix 2), or with Arthrobacter sp. SSM-004 and Microbacterium sp. SSM-001 (Mix 3). Inoculation of PB2, Mix 2, and Mix 3 into non-sterile field soil had a positive effect on root and aboveground dry biomass, depending on the wheat cultivar. The efficiency of the PGPR was further confirmed by the protection they provided against Mycosphaerella graminicola, the causal agent of Septoria leaf blotch disease. PB2 exhibited protection of ≥37.8%, while Mix 2 showed ≥47.9% protection in the four cultivars tested. These results suggest that the interactions between PGPR and native soil microbial communities are crucial for promoting wheat growth and protection. Additionally, high-throughput sequencing of microbial communities conducted 7 days after PGPR inoculations revealed no negative effects of PB2, Mix 2, and Mix 3 on the soil microbial community structure. Interestingly, the presence of Arthrobacter spp. appeared to mitigate the potential negative effect of PB2 on bacterial community and foster root colonization by other beneficial bacterial strains. [ABSTRACT FROM AUTHOR]

Wheat leaf spot caused by Zymoseptoria tritici is a devastating disease in wheat cultivation internationally. Chemical control and the use of resistant varieties are the main control strategies. The International Maize and Wheat Improvement Center (CIMMYT) has wheat lines with quantitative resistance to the disease, so the objective was to map quantitative trait loci (QTL) associated with genetic resistance to leaf spot in the elite line Mutus#1 (resistant), in a population of 275 recombinant inbred lines (RILs) derived from the cross of Mutus#1 with the elite line Huirivis#1 (susceptible). In 2018 and 2019, a field experiment was established at the CIMMYTToluca station under an Alpha Lattice experimental design. An artificial epidemic was generated with Z. tritici and the area under the disease progress curve (AUDPC) was calculated. The 275 RILs and parents were sequenced using the DArTSeq platform. The linkage maps were constructed with the IciMapping program using phenotype and genotype information. Five minor-effect QTLs were identified, three located on chromosomes 1B, 4A and 4B and two on chromosome 5B, which explained less of the symptoms and production of pycnidia in adult plants carried by Mutus#1, they can be used with other resistance genes or QTLs to reduce the selection of new pathogenic strains of Z. tritici. [ABSTRACT FROM AUTHOR]

BACKGROUND: Over the past decade, demethylation inhibitor (DMI) and succinate dehydrogenase inhibitor (SDHI) fungicides have been extensively used to control to septoria tritici blotch, caused by Zymoseptoria tritici on wheat. This has led to the development and selection of alterations in the target‐site enzymes (CYP51 and SDH, respectively). RESULTS: Taking advantage of newly and previously developed qPCR assays, the frequency of key alterations associated with DMI (CYP51‐S524T) and SDHI (SDHC‐T79N/I, C‐N86S and C‐H152R) resistance was assessed in Z. tritici‐infected wheat leaf samples collected from commercial crops (n = 140) across 14 European countries prior to fungicide application in the spring of 2019. This revealed the presence of a West to East gradient in the frequencies of the most common key alterations conferring azole (S524T) and SDHI resistance (T79N and N86S), with the highest frequencies measured in Ireland and Great Britain. These observations were corroborated by sequencing (CYP51 and SDH subunits) and sensitivity phenotyping (prothioconazole‐desthio and fluxapyroxad) of Z. tritici isolates collected from a selection of field samples. Additional sampling made at the end of the 2019 season confirmed the continued increase in frequency of the targeted alterations. Investigations on historical leaf DNA samples originating from different European countries revealed that the frequency of all key alterations (except C‐T79I) has been gradually increasing over the past decade. CONCLUSION: Whilst these alterations are quickly becoming dominant in Ireland and Great Britain, scope still exists to delay their selection throughout the wider European population, emphasizing the need for the implementation of fungicide antiresistance measures. © 2021 Society of Chemical Industry. [ABSTRACT FROM AUTHOR]

Summary: In modern cropping systems, the near‐universal use of plant protection products selects for resistance in pest populations. The emergence and evolution of this adaptive trait threaten treatment efficacy. We identified determinants of fungicide resistance evolution and quantified their effects at a large spatiotemporal scale.We focused on Zymoseptoria tritici, which causes leaf blotch in wheat. Phenotypes of qualitative or quantitative resistance to various fungicides were monitored annually, from 2004 to 2017, at about 70 sites throughout 22 regions of France (territorial units of 25 000 km2 on average). We modelled changes in resistance frequency with regional anti‐Septoria fungicide use, yield losses due to the disease and the regional area under organic wheat.The major driver of resistance dynamics was fungicide use at the regional scale. We estimated its effect on the increase in resistance and relative apparent fitness of each resistance phenotype. The predictions of the model replicated the spatiotemporal patterns of resistance observed in field populations (R2 from 0.56 to 0.82).The evolution of fungicide resistance is mainly determined at the regional scale. This study therefore showed that collective management at the regional scale could effectively complete local actions. [ABSTRACT FROM AUTHOR]

Demethylation inhibitor (DMI) and succinate dehydrogenase inhibitor (SDHI) fungicides are currently relied upon for the control of septoria tritici blotch (STB) in European wheat fields. However, multiple mutations have occurred over time in the genes encoding the targeted proteins that have led to a practical loss of fungicide efficacies. Among the different amino acid substitutions in Zymoseptoria tritici associated with resistance to these fungicides, S524T in CYP51 (DMI target) and H152R in SdhC (SDHI target) are regarded as conferring the highest resistance factors to DMI and SDHI, respectively. To facilitate further studies on the monitoring and selection of these substitutions in Z. tritici populations, a multiplex allele‐specific quantitative PCR (qPCR) assay allowing for estimation of both allele frequencies in bulk DNA matrices was developed. The assay was then used on complex DNA samples originating from a spore trap network set up in Belgium, Denmark, Sweden, and Ireland in 2017 and 2018, as well as on leaf samples with symptoms. The S524T allele was present in all field samples and its proportion was significantly higher in Ireland than in Belgium, whereas the proportion of H152R was only sporadically present in both countries. The frequency of S524T varied greatly in the airborne inoculum of all four countries; however, the H152R allele was never detected in the airborne inoculum. The method developed in this study can be readily adopted by other laboratories and used for multiple applications including resistance monitoring in field populations of Z. tritici. [ABSTRACT FROM AUTHOR]

Background: The ascomycete fungus Zymoseptoria tritici (synonyms: Mycosphaerella graminicola, Septoria tritici) is a major pathogen of wheat that causes the economically important foliar disease Septoria tritici blotch. Despite its importance as a pathogen, little is known about the reaction of this fungus to light. To test for light responses, cultures of Z. tritici were grown in vitro for 16-h days under white, blue or red light, and their transcriptomes were compared with each other and to those obtained from control cultures grown in darkness. Results: There were major differences in gene expression with over 3400 genes upregulated in one or more of the light conditions compared to dark, and from 1909 to 2573 genes specifically upregulated in the dark compared to the individual light treatments. Differences between light treatments were lower, ranging from only 79 differentially expressed genes in the red versus blue comparison to 585 between white light and red. Many of the differentially expressed genes had no functional annotations. For those that did, analysis of the Gene Ontology (GO) terms showed that those related to metabolism were enriched in all three light treatments, while those related to growth and communication were more prevalent in the dark. Interestingly, genes for effectors that have been shown previously to be involved in pathogenicity also were upregulated in one or more of the light treatments, suggesting a possible role of light for infection. Conclusions: This analysis shows that Z. tritici can sense and respond to light with a huge effect on transcript abundance. High proportions of differentially expressed genes with no functional annotations illuminates the huge gap in our understanding of light responses in this fungus. Differential expression of genes for effectors indicates that light could be important for pathogenicity; unknown effectors may show a similar pattern of transcription. A better understanding of the effects of light on pathogenicity and other biological processes of Z. tritici could help to manage Septoria tritici blotch in the future. [ABSTRACT FROM AUTHOR]

In field and laboratory experiments during 2014–2017, we investigated the influence of lower and higher cultivation intensity of wheat and ecological factors (weather—temperature and rainfalls, year) on the occurrence of phytopathogenic fungi on the leaves of winter wheat. The prevailing fungi in those years were Mycosphaerella graminicola (Fuckel) J. Schrott and Pyrenophora tritici-repentis (Died.) Drechsler. Using cluster analysis, we statistically evaluated interrelationships of known factors on the abundance of the fungi on leaf surfaces. Our results showed strongest correlation with Mycosphaerella graminicola and Pyrenophora tritici-repentis abundance to be with lower cultivation intensity and year done by the temperature and the rainfalls. The two pathogens—Puccinia tritici Oerst and Hymenula cerealis Ellis & Everh. occurred only very sparsely in some years and had little positive or negative correlation with named factors. The semi-early and semi-late winter wheat varieties Matchball, Annie, Fakir, and Tobak were used for our experiments. Higher cultivation intensity had protective effect against leaf phytopathogenic fungi. [ABSTRACT FROM AUTHOR]

BACKGROUND Management of pesticide resistance is a major issue in modern agricultural systems, particularly in the context of the broader challenge of reducing pesticide use. However, such management must be adapted to resistance dynamics, which remains challenging to predict due to its dependence on many biological traits of pests, interactions with the environment and pesticide use. We retrospectively studied the evolution of reported resistances to four modes of action (benzimidazoles, quinone outside inhibitors, sterol demethylation inhibitors and succinate dehydrogenase inhibitors), in French populations of the wheat pathogen Zymoseptoria tritici. RESULTS: We used statistical models to analyse the Performance trial network data set (2004–2017; ∼ 70 locations in France yearly). They highlighted contrasting behaviours between phenotypes, for example: (i) stable spatial distributions and colonization front structures over time, and (ii) different frequency growth rates at the national scale and between regions. CONCLUSION: We provide a quantitative description of the spatiotemporal patterns of resistance evolution for fungicides with several modes of action. Moreover, we highlight some unexpected resistance dynamics in France, with major differences between the north and south. This complex pattern of resistance evolution in French populations is consistent with previous descriptions of dynamics at the European scale. These results should make it easier to anticipate evolution locally and to improve the management of resistance. © 2019 Society of Chemical Industry [ABSTRACT FROM AUTHOR]

Crop rotation can have major influences on yield, which may be the result of changes in the composition of the rhizosphere microbiome. In particular there is evidence that yields of both oilseed rape and wheat can be influenced by the frequency in which they are grown in rotation with each other. In the current study we investigated the effect of preceding crops (either wheat or oilseed rape) on wheat and oilseed rape yield, with associated changes in the rhizosphere and bulk soil communities of fungi, bacteria and nematodes using terminal restriction fragment length polymorphism (TRFLP) of rRNA genes. Yield of wheat and oilseed rape were reduced by 11 and 10% respectively when grown two years consecutively. Rhizosphere populations were significantly different to bulk soil populations for all groups of organisms. Seasonal shifts in the communities were observed in the rhizosphere for all groups. Communities of fungi, bacteria and nematodes were all significantly influenced by the preceding crop in the wheat rhizosphere, while just the nematode population was affected by preceding crop in the oilseed rape rhizosphere. In particular when two consecutive crops of oilseed rape were grown, relative abundance of members of nematodes within the genus Eumonhystera increased markedly. The fungal foliar pathogen Mycosphaerella graminicola , the teleomorph of Zymoseptoria tritici which causes septoria leaf blotch in wheat, was identified in the rhizosphere of wheat and was significantly more abundant in wheat grown after oilseed rape. We conclude that overall, preceding crop had less impact on community composition than season or crop type, but that specific changes in communities at particular plant growth stages may have substantive impacts on crop growth. [ABSTRACT FROM AUTHOR]

Zymoseptoria tritici, the causal agent of septoria tritici blotch (STB), remains a significant threat to European wheat production with the continuous emergence of fungicide resistance in Z. tritici strains eroding the economic sustainability of wheat production systems. The life cycle of Z. tritici is characterized by a presymptomatic phase (latent period, LP) after which the pathogen switches to an aggressive necrotrophic stage, when lesions bearing pycnidia quickly manifest on the leaf. As minimal knowledge of the possible role of the LP in supporting STB resistance/susceptibility exists, the goal of this study was to investigate the spatial and temporal association between the LP and disease progression across three locations (Ireland – Waterford, Carlow; UK – Norwich) that represent commercially high, medium and low STB pressure environments. Completed over two seasons (2013–2015) with commercially grown cultivars, the potential of the LP in stalling STB epidemics was significant as identified with cv. Stigg, whose high level of partial resistance was characterized by a lengthened LP (c. 36 days) under the high disease pressure environment of Waterford. However, once the LP concluded it was followed by a rate of disease progression in cv. Stigg that was comparable to that observed in the more susceptible commercial varieties. Complementary analysis, via logistic modelling of intensive disease assessments made at Carlow and Waterford in 2015, further highlighted the value of a lengthened LP in supporting strong partial resistance against STB disease of wheat. [ABSTRACT FROM AUTHOR]

The dimorphic fungal pathogen, Zymoseptoria tritici undergoes discrete developmental changes to complete its life cycle on wheat. Molecular mechanisms underlying morphogenesis during infection process of Z. tritici are poorly understood. In this study, we have investigated the role of ZtVf1 gene encoding a transcription factor belonging to C 2 -H 2 subfamily. In planta assays revealed that ZtVf1 is required for virulence. Reduced necrotic lesions and low pycnidia density within the lesions resulted in significantly reduced virulence of ZtVf1 mutants. Cytological analysis showed that the impaired virulence of ZtVf1 mutants attributed to reduced penetration and colonization along with hampered pycnidia differentiation. In vitro phenotyping showed that ZtVf1 deletion affects hyphal branching and biomass production suggesting that the reduced tissue colonization by the ZtVf1 mutant might be due to lower hyphal branching and less fungal biomass production. In addition, the majority of infected substomatal cavities by the ZtVf1 mutant filled with compacted mycelia mat that did not differentiate to mature pycnidia indicating that the impaired melanization negatively affected pycnidia formation and maturation. The ZtVf1 might target multiple genes belonging to different cellular processes whose identification is of eminent interest to increase our understanding of this pathosystem. Overall, the data provided in this study indicates that attenuated pathogenicity of ZtVf1 mutant is due to involvement of this gene in the regulation of both early and late stages of infection. [ABSTRACT FROM AUTHOR]

The response of Polish winter wheat genotypes to M.graminicola (preliminary experiments and cultivar collections) was observed in different regions of Poland. Observations were carried out in 1995-1999. The winter wheat genotypes showed a broad spectrum of reaction to this pathogen. Between 1997 and 1999 the highest degree of infection on winter wheat breeding lines was noted in Kończewice. During this time no genotypes free from infection were observed (preliminary breeding experiments). Cultivars with no symptoms of Septoria tritici blotch (Leszczyńska Wczesna and Żelazna) were found among old genotypes in Słupia Wielka only in earlier experiments (1995-1996). In the years 1997-1999 the winter wheat cultivars were classified into groups on the basis of their response to the pathogen. The degree of infection for the majority cultivars was quite high.

Zymoseptoria tritici causes Septoria leaf blotch of wheat. The prevailing paradigm of the Z. tritici -wheat interaction assumes fungal ingress through stomata within 24–48 h, followed by days of symptomless infection. This is extrapolated from studies testing the mode of fungal ingress under optimal infection conditions. Here, we explicitly assess the timing of entry, using GFP-tagged Z. tritici . We show that early entry is comparatively rare, and extended epiphytic growth possible. We test the hypotheses that our data diverge from earlier studies due to: i. random ingress of Z. tritici into the leaf, with some early entry events; ii. previous reliance upon fungal stains, combined with poor attachment of Z. tritici to the leaf, leading to increased likelihood of observing internal versus external growth, compared to using GFP; iii. use of exceptionally high humidity to promote entry in previous studies. We combine computer simulation of leaf-surface growth with thousands of in planta observations to demonstrate that while spores germinate rapidly on the leaf, over 95% of fungi remain epiphytic, growing randomly over the leaf for ten days or more. We show that epiphytic fungi are easily detached from leaves by rinsing and that humidity promotes epiphytic growth, increasing infection rates. Together, these results explain why epiphytic growth has been dismissed and early ingress assumed. The prolonged epiphytic phase should inform studies of pathogenicity and virulence mutants, disease control strategies, and interpretation of the observed low in planta growth, metabolic quiescence and evasion of plant defences by Zymoseptoria during symptomless infection. [ABSTRACT FROM AUTHOR]

An association genetics analysis was conducted to investigate the genetics of resistance to Septoria tritici blotch, caused by the fungus Zymoseptoria tritici (alternatively Mycosphaerella graminicola), in cultivars and breeding lines of wheat ( Triticum aestivum) used in the UK between 1860 and 2000. The population was tested with Diversity Array Technology (DArT) and simple-sequence repeat (SSR or microsatellite) markers. The lines formed a single population with no evidence for subdivision, because there were several common ancestors of large parts of the pedigree. Quantitative trait loci (QTLs) controlling Septoria resistance were postulated on 11 chromosomes, but 38% of variation was not explained by the identified QTLs. Calculation of best linear unbiased predictions (BLUPs) identified lineages of spring and winter wheat carrying different alleles for resistance and susceptibility. Abundant variation in Septoria resistance may be exploited by crossing well-adapted cultivars in different lineages to achieve transgressive segregation and thus breed for potentially durable quantitative resistance, whereas phenotypic selection for polygenic quantitative resistance should be effective in breeding cultivars with increased resistance. The most potent allele reducing susceptibility to Septoria, on chromosome arm 6AL, was associated with reduced leaf size. Genes which increase susceptibility to Septoria may have been introduced inadvertently into UK wheat breeding programmes from cultivars used to increase yield, rust resistance and eyespot resistance between the 1950s and 1980s. This indicates the need to consider trade-offs in plant breeding when numerous traits are important and to be cautious about the use of non-adapted germplasm. [ABSTRACT FROM AUTHOR]

We investigated whether the origin of primary inoculum of the fungal wheat pathogen Zymoseptoria tritici can be inferred from evidence of adaptation to host cultivars. We compared the aggressiveness of two pathogen populations collected locally, the first considered as resident (collected from debris in a wheat cv. Soissons monoculture plot) and the second considered as immigrant (collected from leaf lesions in a 300 m apart wheat cv. Soissons plot containing no debris, exposed to an inoculum pool of distant origin), with the aggressiveness of a third population (collected from early leaf lesions in the same monoculture plot) the origin of which we wanted to determine (local vs. distant). The three populations were sampled twice, in 2009 and 2012, from a 6-year field trial. Latent period and sporulating area of 6 × 12 isolates were assessed in greenhouse on adult plants of cv. Soissons and of Apache, another cultivar commonly grown around the field for several years. Firstly, we detected a differential host adaptation: after several years of monoculture, the resident pathogen populations became less adapted to the other cultivar. Secondly, we showed that when the inoculum pressure was high (2009), the aggressiveness profile of the third pathogen population was more similar to that of the resident populations than of the immigrant. This indicates that early lesions in the monoculture plot were mostly caused by within-field (local) primary inoculum. The comparison of aggressiveness profiles when the inoculum pressure was lower (2012) was less conclusive, suggesting that the tested population could have a mixed origin. [ABSTRACT FROM AUTHOR]

The Dothideomycete fungus Zymoseptoria tritici (previously known as Mycosphaerella graminicola and Septoria tritici) is the causative agent of Septoria tritici leaf blotch (STB) disease of wheat (Triticum aestivum L.). In Europe, STB is the most economically damaging disease of wheat, with an estimated ~€1 billion per year in fungicide expenditure directed toward its control. Here, an overview of our current understanding of the molecular events that occur during Z. tritici infection of wheat leaves is presented. On the host side, this includes the contribution of (1) the pathogen-associated molecular pattern-triggered immunity (PTI) layer of plant defense, and (2) major Stb loci for resistance against Z. tritici. On the pathogen side of the interaction, we consolidate evidence from recent bioinformatic, transcriptomic and proteomic studies that begin to explain the contribution of Z. tritici effector proteins to the biphasic lifestyle of the fungus. This includes the discovery of chitin-binding proteins in the Z. tritici secretome, which contribute to evasion of immune surveillance by this pathogen, and the possible existence of 'necrotrophic' effectors from Z. tritici, which may actively stimulate host recognition in a manner similar to related necrotrophic fungal pathogens. We finish by speculating on how some of these recent fundamental discoveries might be harnessed to help improve resistance to STB in the world's second largest food crop. [ABSTRACT FROM AUTHOR]

To elucidate the early epidemic stages of septoria tritici blotch, especially the relationship between the onset of epidemics, the local availability of primary inoculum, and the presence of wheat debris, the early disease dynamics and airborne concentration in Zymoseptoria tritici ascospores were concomitantly assessed at a small spatiotemporal scale and over two years, using spore traps coupled with a qPCR assay. One plot, with the crop debris left, provided a local source of primary inoculum, while the other plot, without debris, lacked any. According to the assay's limits of detection, daily spore trap samples were classified as not detectable or not quantifiable, detectable, and quantifiable. The proportions of samples assigned to the different classes and numbers of spores in samples classified as quantifiable were significantly different between years, time periods (from November to March) and spore trap location (field with or without debris). The effect of year on the airborne ascospore concentration was high: 22 daily peaks with more than 230 ascospores m−3 day−1 were identified in the autumn of 2012/13, but none in the autumn of 2011/12. The local presence of wheat debris had no obvious effect on the amount of airborne ascospores or on the earliness of the two epidemics, especially in the year with high inoculum pressure (2012/13). These results suggest that the amount of primary airborne inoculum available in a wheat crop is not a limiting factor for the onset of an epidemic. [ABSTRACT FROM AUTHOR]

Zymoseptoria tritici ascospores and pycnidiospores are considered the main forms of primary and secondary inoculum, respectively, in septoria tritici blotch epidemics. The pathogenicity of the two types of spores of the same genotypic origin were compared through a two-stage inoculation procedure in controlled conditions. Adult wheat leaves were inoculated with ascospores collected from field sources, yielding 119 lesions; pycnidiospores collected from 12 lesions resulting from these ascospore infections were then used for inoculation. Lesion development was assessed for 5 weeks; latent period, lesion size, and pycnidium density were estimated for different isolates. The latent period was calculated as the maximum likely time elapsed between inoculation and either the appearance of the majority of the sporulating lesions (leaf scale) or the appearance of the first pycnidia (lesion scale). The latent period was significantly longer ( c. 60 degree-days, i.e. 3-4 days) after infection with ascospores than with pycnidiospores. No difference was established for lesion size and density of pycnidia. A comparison with other ascomycete fungi suggested that the difference in latent period might be related to the volume of spores and their ability to cause infection. Fungal growth before the appearance of lesions may be slower after inoculation with an ascospore than with a pycnidiospore. The mean latent period during the very beginning of epidemics, when first lesions are mainly caused by ascospores, may be longer than during spring, when secondary infections are caused by pycnidiospores. Disease models would be improved if these differences were considered. [ABSTRACT FROM AUTHOR]

Fungal plant pathogens, such as Zymoseptoria tritici (formerly known as Mycosphaerella graminicola), secrete repertoires of effectors to facilitate infection or trigger host defence mechanisms. The discovery and functional characterization of effectors provides valuable knowledge that can contribute to the design of new and effective disease management strategies. Here, we combined bioinformatics approaches with expression profiling during pathogenesis to identify candidate effectors of Z. tritici. In addition, a genetic approach was conducted to map quantitative trait loci ( QTLs) carrying putative effectors, enabling the validation of both complementary strategies for effector discovery. In planta expression profiling revealed that candidate effectors were up-regulated in successive waves corresponding to consecutive stages of pathogenesis, contrary to candidates identified by QTL mapping that were, overall, expressed at low levels. Functional analyses of two top candidate effectors ( SSP15 and SSP18) showed their dispensability for Z. tritici pathogenesis. These analyses reveal that generally adopted criteria, such as protein size, cysteine residues and expression during pathogenesis, may preclude an unbiased effector discovery. Indeed, genetic mapping of genomic regions involved in specificity render alternative effector candidates that do not match the aforementioned criteria, but should nevertheless be considered as promising new leads for effectors that are crucial for the Z. tritici-wheat pathosystem. [ABSTRACT FROM AUTHOR]

Key message: New QTL for Septoria tritici blotch detected in hexapoid spring wheat under field conditions across diverse environments. Abstract: Septoria tritici blotch caused by the ascomycete fungus Zymoseptoria tritici presents a serious and consistent challenge to global wheat production. In particular the augmented use of soil management practices that leave large amounts of wheat stubble on the soil surface and global warming increases the chance of Septoria tritici blotch epidemics to emerge more frequently including in developing countries. Two recombinant inbred line populations developed from a cross between the susceptible Moroccan spring bread wheat variety 'NASMA' and the CIMMYT resistant lines, 'IAS20*5/H567.71' and 'RPB709.71/COC' were used to study the genetics and map adult-plant resistance to Septoria tritici blotch under field conditions in different environments. Resistance to Septoria tritici blotch in both populations was quantitative and overall, five across environment consistent resistance loci on chromosomes 1BS, 3AL, 5AL and 7AS were detected in the two populations. The QTL on chromosome 1BS and 7AS are likely to be allelic with the known Septoria tritici blotch genes Stb3 and Stb11. All identified QTL were additive and explained between 4 and 27 % of the phenotypic variation. Epistatic interaction was not observed. Low cost KASP assays were developed as flanking markers for all five QTL that will facilitate molecular breeding. Our study represents the first mapping effort under field conditions utilizing two spring bread wheat resistant sources evaluated over multiple environments. [ABSTRACT FROM AUTHOR]

Five winter wheat cultivars, differing in resistance to Septoria tritici blotch (STB), were spray inoculated under field conditions for two years and at two locations with nine Mycosphaerella graminicola isolates and a mixture of isolates that were obtained from different regions of the Czech Republic. Main aims of this study were (i) to compare isolate, host cultivar and environmental effects on five traits indicative of STB severity and (ii) to analyse pathogen aggressiveness and host-pathogen relations for improving evaluation of cultivar resistance. ANOVA showed in all traits, except the reduction in 1000 grain weight, significant isolate effects. However, the effects of isolate and genotype by isolate interactions were much lower (2.3-4%) than cultivar (19.1-53.7%) and environ- mental (11.9-58.6%) effects. Cultivar resistance to the disease limited much the loss in grain weight per spike to a halve, from 34.7% in the susceptible Bakfis to 17.3% in the resistant Arina. Visual scoring of symptoms in the middle and at the end of disease development (performed on the 1-9 scale), reflecting the disease progress and infected leaf area, showed the highest cultivar effect (54%) and could be recommended for evaluation of cultivar resistance in breeding practice. All examined traits were significantly interrelated, but significant differences between all the five cultivars were only detected after examination of the % coverage of flag leaves with lesions bearing pycnidia. Resistance in the cultivar Arina was detected by all isolates and the isolate mixture. In spite of significant differences in classification of resistances in the cultivars Bohemia and Mulan after inoculation with one isolate (1081), specific interactions between cultivars and isolates collected in this Central European region are rare. The study leads to a conclusion that investigation into stability of STB resistance across a wide range of environments is more valuable for breeding purposes than the study of cultivar response to different isolates. Combination of important isolate properties in a mixture of isolates is stressed as well [ABSTRACT FROM AUTHOR]

Septoria Leaf Blotch (Mycosphaerella graminicola (Fuckel) J. Schröt, in Cohn, (anamorfo Zymoseptoria tritici) reduce the grain yield and quality in wheat crops. The aim was to analyze the green leaf area duration, N (nitrogen) accumulation and remobilization on grain and quality in wheat cultivars under three different concentrations of M. graminicola. The experimental design was a split-plot design with three replications. The main plot was the inoculum concentration: without inoculum, low and high spores concentration, and the subplots were seven cultivars. Disease severity, area under disease progress curve, green leaf area duration, remobilization and N uptake, grain protein and gluten content were determined. The highest area under disease progress curve values were found in the ino culated treatments. Green leaf area duration was reduced by inoculum concentration affecting grain yield and their components. Septoria Leaf Blotch reduced N remobilization, whereas post anthesis N uptake was less affected producing lower N grain content. Despite this, protein and gluten grain content increased by a concentration effect due to a decrease in grain yield in the diseased treatments. [ABSTRACT FROM AUTHOR]

Virus-induced gene silencing (VIGS) has emerged as a powerful reverse genetic technology in plants supplementary to stable transgenic RNAi and, in certain species, as a viable alternative approach for gene functional analysis. The RNA virus Barley stripe mosaic virus (BSMV) was developed as a VIGS vector in the early 2000s and since then it has been used to study the function of wheat genes. Several variants of BSMV vectors are available, with some requiring in vitro transcription of infectious viral RNA, while others rely on in planta production of viral RNA from DNA-based vectors delivered to plant cells either by particle bombardment or Agrobacterium tumefaciens . We adapted the latest generation of binary BSMV VIGS vectors for the identification and study of wheat genes of interest involved in interactions with Zymoseptoria tritici and here present detailed and the most up-to-date protocols. [ABSTRACT FROM AUTHOR]

Cell biological research in the wheat pathogen Zymoseptoria tritici (formerly Mycosphaerella graminicola ) has led to a good understanding of the histology of the infection process. Expression profiling and bioinformatic approaches, combined with molecular studies on signaling pathways, effectors and potential necrosis factors provides first insight into the complex interplay between the host and the pathogen. Cell biological studies will help to further our understanding of the infection strategy of the fungus. The cellular organization and intracellular dynamics of the fungus itself is largely unexplored. Insight into essential cellular processes within the pathogen will expand our knowledge of the basic biology of Z. tritici , thereby providing putative new anti-fungal targets. [ABSTRACT FROM AUTHOR]

Zymoseptoria tritici (previously Mycosphaerella graminicola , teleomorph, Septoria tritici , anamorph) causes Septoria tritici blotch, one of the most economically important diseases of wheat ( Triticum aestivum ). The host pathogenic interaction, as currently understood, is intriguing, and may distinguish Z. tritici from many of the current models for plant pathogenic fungi. Many important questions remain which require a deeper understanding including; the nature and biological significance of the characteristic long latent periods of symptomless plant infection; how/why the fungus then effectively transitions from this to cause disease and reproduce? Elements of this transition currently resemble a putative “hijack” on plant defence but how is Z. tritici able to do this without any form of plant cell penetration? This commentary provides a summary of the recent history of research into the host-pathogen interaction, whilst highlighting some of the challenges going forwards, which will be faced by improved technologies and a growing research community. [ABSTRACT FROM AUTHOR]

Much has been written and said of the importance of crop management to sustain plant health, a fundamental for feeding a world population expected to reach around nine billion by 2050. Yet, the two elements, crop management and plant health management, are generally addressed as two distinct entities, the former often being seen as a source for options for the latter. Agriculture of the Middle Age (900-1600 CE) seems not always to have distinguished crop and plant health management, considering them instead as a whole. In this article, these elements are addressed as parts of production situations, which represent a much broader level of integration for systems analysis. At the production situation level, plant disease epidemics, or their suppression, can both be seen as consequences of crop management. Modern agriculture tends to distinguish specific plant health management techniques (which are often over-emphasized) and general, non-specific ones (which are often downplayed). The former (e.g., specific host plant resistances, biological control, pesticides) may be overcome rather rapidly by plant pathogens, while the latter (e.g., crop rotation, tillage), with often progressive, incomplete, and confounded effects, may constitute the basis of sustainable management of plant health. A simulation modelling framework, with two model structures, is used to highlight the three components of disease management outlined by Berger ( Annual Review of Phytopathology, 15, 165-183, ): (1) eliminate or reduce the initial inoculum or delay its appearance, (2) slow the rate of disease increase, and (3) shorten the time of exposure of the crop to the pathogen. The degree of involvement of these three components is further discussed in three groups of examples in plant production systems that significantly contribute to global food provisioning and food security. A few modelling outputs and evaluation of these examples suggest that, even in the most specialized production situations, both specific and non-specific plant health management strategies are necessary for sustained health of our crops and for durable performances of agricultural systems. [ABSTRACT FROM AUTHOR]

Background and Aims Sustainable agriculture requires the identification of new, environmentally responsible strategies of crop protection. Modelling of pathosystems can allow a better understanding of the major interactions inside these dynamic systems and may lead to innovative protection strategies. In particular, functional–structural plant models (FSPMs) have been identified as a means to optimize the use of architecture-related traits. A current limitation lies in the inherent complexity of this type of modelling, and thus the purpose of this paper is to provide a framework to both extend and simplify the modelling of pathosystems using FSPMs. Methods Different entities and interactions occurring in pathosystems were formalized in a conceptual model. A framework based on these concepts was then implemented within the open-source OpenAlea modelling platform, using the platform's general strategy of modelling plant–environment interactions and extending it to handle plant interactions with pathogens. New developments include a generic data structure for representing lesions and dispersal units, and a series of generic protocols to communicate with objects representing the canopy and its microenvironment in the OpenAlea platform. Another development is the addition of a library of elementary models involved in pathosystem modelling. Several plant and physical models are already available in OpenAlea and can be combined in models of pathosystems using this framework approach. Key Results Two contrasting pathosystems are implemented using the framework and illustrate its generic utility. Simulations demonstrate the framework's ability to simulate multiscaled interactions within pathosystems, and also show that models are modular components within the framework and can be extended. This is illustrated by testing the impact of canopy architectural traits on fungal dispersal. Conclusions This study provides a framework for modelling a large number of pathosystems using FSPMs. This structure can accommodate both previously developed models for individual aspects of pathosystems and new ones. Complex models are deconstructed into separate ‘knowledge sources’ originating from different specialist areas of expertise and these can be shared and reassembled into multidisciplinary models. The framework thus provides a beneficial tool for a potential diverse and dynamic research community. [ABSTRACT FROM AUTHOR]

Copyright of Canadian Journal of Plant Science is the property of Canadian Science Publishing and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Arbuscular-mycorrhizal internal structures (i.e. total root colonization, arbuscules, vesicles) and external structures (i.e. spore density), and Glomeromycota spore morphotypes, were evaluated in wheat severely infected with Mycosphaerella graminicola -- the causal agent of Septoria leaf blotch. Plots in which the infection was controlled with a commercial fungicide at recommended field doses, were also examined. The commercial fungicide used was an admixture of trifloxistrobin and tebuconazole. No negative effects of the fungicide application on arbuscular-mycorrhizal fungi (AMF) were found. The M. graminicola fungicidal treatment actually favoured the formation of arbuscules and AMF spores, as there was a selective increase in the density of spores belonging to the glomoid morphotype. Arbuscular-mycorrhizal fungi have an absolute dependence on the carbon provided by the plant. A severe foliar disease leading to a diminished carbon supply to the roots would generate decreases in carbon availability. Such decreases would strongly affect mycorrhizal associations and development. Furthermore, the change in the green-leaf area produced by a severe foliar disease and/or a reversal of that condition through fungicide treatment could result in shifts in the composition of the AMF community so as to favour glomoid morphotypes. Glomoid species have been previously considered as r-strategists. [ABSTRACT FROM AUTHOR]

The use of cultivar mixtures to control foliar fungal diseases is well documented for windborne diseases, but remains controversial for splash-dispersed diseases. To try to improve this strategy, a cultivar mixture was designed consisting of two wheat cultivars with contrasted resistance to Mycosphaerella graminicola, responsible for the rainborne disease septoria tritici blotch ( STB), in a 1:3 susceptible:resistant ratio rather than the 1:1 ratio commonly used in previous studies. The impact of natural STB epidemics in this cultivar mixture was studied in field experiments over 4 years. Weekly assessments of the number of sporulating lesions, pycnidial leaf area and green leaf area were carried out on the susceptible cultivar. In years with sufficient STB pressure, disease impacts on the susceptible cultivar in the mixture were always significantly lower than in the pure stand (e.g. 42% reduction of pycnidial leaf area for the three upper leaves in 2008 and 41% in 2009). In years with low STB pressure (2010 and 2011), a reduction of disease impacts was also shown but was not always significant. After major rainfall events, the number of sporulating lesions observed on the susceptible cultivar after one latent period was reduced on average by 45% in the mixture compared to the pure stand. All the measurements showed that a susceptible cultivar was consistently protected, at least moderately, in a mixture under low to moderate STB pressure. Therefore, the results prove that the design of an efficient cultivar mixture can include the control of STB, among other foliar diseases. [ABSTRACT FROM AUTHOR]

The thermal performance curve is an ecological concept relating the phenotype of organisms and temperature. It requires characterization of the leaf temperature for foliar fungal pathogens. Epidemiologists, however, use air temperature to assess the impacts of temperature on such pathogens. Leaf temperature can differ greatly from air temperature, either in controlled or field conditions. This leads to a misunderstanding of such impacts., Experiments were carried out in controlled conditions on adult wheat plants to characterize the response of Mycosphaerella graminicola to a wide range of leaf temperatures. Three fungal isolates were used. Lesion development was assessed twice a week, whereas the temperature of each leaf was monitored continuously., Leaf temperature had an impact on disease dynamics. The latent period of M. graminicola was related to leaf temperature by a quadratic relationship. The establishment of thermal performance curves demonstrated differences among isolates as well as among leaf layers., For the first time, the thermal performance curve of a foliar fungal pathogen has been established using leaf temperature. The experimental setup we propose is applicable, and efficient, for other foliar fungal pathogens. Results have shown the necessity of such an approach, when studying the acclimatization of foliar fungal pathogens. [ABSTRACT FROM AUTHOR]

Septoria tritici blotch (STB) caused by the ascomycete fungus Mycosphaerella graminicola (anamorph S. tritici) is currently one of the most serious foliar disease of wheat in Europe and other world regions characterized by temperate and wet environment during growing season. Twenty-five wheat genotypes with different resistance levels were evaluated in natural conditions for their reaction to S. tritici attack during 2009-2010 year. The experimental design was a randomized block design with three replications. Disease rating was visually recorded by using the double-digit scale (00-99) in two different times and crop stages (Z53-1/4 head out and Z70-milk development). There were also calculated the Septoria Progress Coefficient (SPC) and Area under Disease Progress Curve (AUDPC) for each wheat genotype evaluated. SPC was low for the higher genotypes comparatively with the shortest ones leading to the conclusion that disease progress is higher as plant height is low (r=-0,8584***). The same aspect was also emphasized by the negative correlation between plants height and disease progress height (r=-0,7241**).The shortest genotypes showed higher necrosis percentage and AUDPC values. There was also a correspondence between genotype susceptibility and AUDPC showing that the most susceptible wheat cultivars recorded higher AUDPC values. Thus, Renan (295), Esential (231), Renesansa (234), Autan (186) recorded the highest AUDPC values while Aztec (45), Meunier (41) and Capo (20) had the best resistance reaction to S. tritici attack. Comparatively with the control Briana cultivar (AUDPC = 153), created to ARDS Simnic, the differences recorded by Renan, Renesansa Esential, Ciprian, Exotic, Cezanne, Aztec, Capo and Meunier were statistically significant. There was also a negative correlation between AUDPC and yield (r=-0,5140). The Area under the Disease Progress Curve (AUDPC) can be an efficient instrument to evaluate the epidemic development of foliar pathogen S. tritici considering each genotype susceptibility and specific architecture. [ABSTRACT FROM AUTHOR]

The Dothideomycete fungus Mycosphaerella graminicola is the causal agent of Septoria tritici blotch, a devastating disease of wheat leaves that causes dramatic decreases in yield. Infection involves an initial extended period of symptomless intercellular colonisation prior to the development of visible necrotic disease lesions. Previous functional genomics and gene expression profiling studies have implicated the production of secreted virulence effector proteins as key facilitators of the initial symptomless growth phase. In order to identify additional candidate virulence effectors, we re-analysed and catalogued the predicted protein secretome of M. graminicola isolate IPO323, which is currently regarded as the reference strain for this species. We combined several bioinformatic approaches in order to increase the probability of identifying truly secreted proteins with either a predicted enzymatic function or an as yet unknown function. An initial secretome of 970 proteins was predicted, whilst further stringent selection criteria predicted 492 proteins. Of these, 321 possess some functional annotation, the composition of which may reflect the strictly intercellular growth habit of this pathogen, leaving 171 with no functional annotation. This analysis identified a protein family encoding secreted peroxidases/ chloroperoxidases (PF01328) which is expanded within all members of the family Mycosphaerellaceae. Further analyses were done on the non-annotated proteins for size and cysteine content (effector protein hallmarks), and then by studying the distribution of homologues in 17 other sequenced Dothideomycete fungi within an overall total of 91 predicted proteomes from fungal, oomycete and nematode species. This detailed M. graminicola secretome analysis provides the basis for further functional and comparative genomics studies. [ABSTRACT FROM AUTHOR]

Co-evolution of wheat and its devastating pathogen Mycosphaerella graminicola (anamorph Septoria tritici) , the causal agent of septoria tritici blotch, a foliar disease of wheat, is suggested to occur in Fertile Crescent as their center of origin and, thus, interaction between pathogen virulence and host resistance is important subject to be addressed. We have investigated resistance spectra of 54 wheat genotypes including a set of differentials carrying known resistance genes and virulence patterns of 14 M. graminicola isolates at seedling stage under controlled environmental conditions. The isolates were collected in Iran from five provinces. Diversity in virulence and aggressiveness was observed among the isolates from four provinces. Isolates collected from Golestan province were virulent to all wheat genotypes from germplasm of Iran, while specific resistances were identified to the isolates from other provinces. Among wheat genotypes, cvs. Chamran, Morvarid and Hirmand had the greatest number of specific resistances as well as partial resistance. Wheat genotypes of the differential set also differed in their reactions to the isolates. Arina, Flame and TE 9111 were specifically resistant to the greatest number of isolates from different provinces. Most isolates were virulent to the other differentials such as cvs. Shafir, Estanzuela federal and Courtot indicating that extensive adaption of virulence to most of the known resistance genes ( Stb) has occurred in these regions. The new sources of resistance to highly virulent isolates from Iran may also be utilized in wheat breeding programs to develop resistant cultivars against pathogen populations in other countries. [ABSTRACT FROM AUTHOR]

Septoria tritici blotch (STB), caused by S. tritici, Stagonospora glume blotch (SGB), caused by S. nodorum, and Fusarium head blight (FHB), caused by F. graminearum and F. culmorum, are the most important diseases of wheat ( Triticum aestivum L.) in temperate growing areas. The main goals of this study were to detect (1) new quantitative trait loci (QTL) for STB resistance in two adapted European biparental populations (Arina/Forno, History/Rubens) and (2) QTL regions for broad-spectrum resistance (BSR) to the above-mentioned diseases during the adult-plant stage in the field. The three resistances were phenotyped across 4-7 field environments and phenotypic data revealed significant ( P < 0.01) genotypic differentiation in all cases. Entry-mean heritabilities ( h²) ranged from 0.73 to 0.93. For STB resistance, correlations between disease ratings and heading date were significant ( P < 0.01), but moderate ( r = −0.23 to −0.30) in both populations. Correlations between STB and plant height were higher in Arina/Forno ( r = −0.45) and History/Rubens ( r = −0.55), the latter population segregating at the Rht- D1 locus. During the initial QTL analysis, 5 QTL were detected for STB resistance in each of the populations, amounting to an explained genotypic variance of 45-63%, thus, showing the same ranges as FHB and SGB resistances in Arina/Forno and FHB resistance in History/Rubens. In total, 7 BSR QTL were found in the meta-analysis with the raw data, including the QTL on chromosome 4D at the Rht- D1 locus. A BSR QTL for all three diseases was not found but several BSR QTL for combinations with two diseases were detected. Combining the BSR QTL detected in the present breeding material by applying marker-assisted selection seems a promising approach. [ABSTRACT FROM AUTHOR]

Mycosphaerella graminicola is a heterothallic ascomycete responsible for Septoria tritici blotch, the most frequently reported disease on wheat crops over the last decade. A set of 230 monoconidial isolates of this pathogen were obtained from six wheat-producing regions of Morocco and assayed by multiplex PCR to assess the mating type distribution and provide insight into the occurrence of sexual reproduction in this country. Both mating types were identified on bread wheat and durum wheat and found to occur at different rates throughout the country. At the whole country level, 44% of the assessed isolates were MAT1-1 and 56% were MAT1-2. Both mating types were found in each surveyed areas, with equal frequencies in Chaouia, Meknes- Tafilalet, Tadla-Azilal and Doukkala-Abda but not in Gharb and Fes-Boulmane. At the finer scale, both idiomorphs were identified together on 37% of the leaves and on 23% of the lesions from which multiple isolates were recovered. The overall co-occurrence of the two mating types suggests that sexual recombination of M. graminicola might be frequent in Morocco and most likely plays a major role in the epidemiology and the evolution of the pathogen in this country. [ABSTRACT FROM AUTHOR]

A method for calculating the effect of disease control on greenhouse gas (GHG) emissions associated with wheat production, reported previously, was developed further to account for effects of disease control on the amount of fertilizer nitrogen (N) which should be applied and on changes in land use. Data from nine randomized and replicated field experiments from the UK and Denmark showed that the economic optimum N input to winter wheat was greater if diseases were controlled by fungicides, than for untreated wheat. The GHGs associated with this additional N largely negated the benefit to emissions per tonne of grain resulting from disease control. However, the mean grain yield obtained without fungicide treatment was 6·71 t ha−1, compared to 8·88 t ha−1 with fungicide treatment, if N input was optimal for each situation. In the absence of disease control by fungicides, and assuming that the optimum N rate was used, an additional 481 kha of wheat would be required to maintain UK wheat production at the current level. If the additional land area came from converting temperate grassland to arable production, the GHG emissions caused by ploughing grassland would cause emissions to rise from 503 to 713 kg CO2e per tonne of grain produced. This would result in an additional 3·15 Mt CO2e per year to produce the typical UK annual production of 15 Mt. This analysis reinforces the importance of winning the ‘arms race’ against pathogen evolution towards fungicide insensitivity and virulence. [ABSTRACT FROM AUTHOR]

The accumulation of the pathogenesis-related (PR) proteins β-1,3-glucanase and chitinase and structural defence responses were studied in leaves of wheat either resistant or susceptible to the hemibiotrophic pathogen Septoria tritici. Resistance was associated with an early accumulation of β-1,3-glucanase and chitinase transcripts followed by a subsequent reduction in level. Resistance was also associated with high activity of β-1,3-glucanase, especially in the apoplastic fluid, in accordance with the biotrophic/endophytic lifestyle of the pathogen in the apoplastic spaces, thus showing the highly localized accumulation of defence proteins in the vicinity of the pathogen. Isoform analysis of β-1,3-glucanase from the apoplastic fluid revealed that resistance was associated with the accumulation of an endo-β-1,3-glucanase, previously implicated in defence against pathogens, and a protein with identity to ADPG pyrophosphatase (92%) and germin-like proteins (93%), which may be involved in cell wall reinforcement. In accordance with this, glycoproteins like extensin were released into the apoplast and callose accumulated to a greater extent in cell walls, whereas lignin and polyphenolics were not found to correlate with defence. Treatment of a susceptible wheat cultivar with purified β-1,3-glucan fragments from cell walls of S. tritici gave complete protection against disease and this was accompanied by increased gene expression of β-1,3-glucanase and the deposition of callose. Collectively, these data indicate that resistance is dependent on a fast, initial recognition of the pathogen, probably due to β-1,3-glucan in the fungal cell walls, and this results in the accumulation of β-1,3-glucanase and structural defence responses, which may directly inhibit the pathogen and protect the host against fungal enzymes and toxins. [ABSTRACT FROM PUBLISHER]

Septoria tritici blotch (STB) caused by Mycosphaerella graminicola (anamorph: Septoria tritici), is one of the most important foliar diseases of wheat. We assessed three doubled-haploid (DH) populations derived from Chara (STB-susceptible)/WW2449 (STB-resistant), Whistler (STB-susceptible)/WW1842 (STB-resistant) and Krichauff (STB susceptible)/WW2451 (STB-resistant) for resistance to a single-pycnidium isolate 79.2.1A of M. graminicola at the seedling stage. STB resistance in each of the three DH populations was conditioned by a single major gene designated as StbWW2449, StbWW1842 and StbWW2451. Linkage analyses and physical mapping indicated that the StbWW loci were located on the short arm of chromosome 1B (IBS). Four simple sequence repeat (SSR) markers linked with STB resistance: Xwmc230, Xbarc119b, Xksum045 and Xbarc008 were located to the distal bin of 1BS.sat1BS-4 (FL: 0.52–1.00) in the 1BS physical map. Xwmc230, Xbarc119b and Xksum045 markers, mapped within 7 cM from StbWW were validated for their linkage and predicted the STB resistance with over 94% accuracy in the 79 advanced breeding lines having WW2449 as one of the parents. The marker interval Xwmc230/Xksum045-Xbarc119b also explained up to 38% of the phenotypic variance at the adult plant stage in all three DH mapping populations. These results have proven that SSR markers are useful in monitoring STB resistance both at seedling and adult plant stages and hence are suitable for routine marker-assisted selection in the wheat breeding programs. [ABSTRACT FROM AUTHOR]

This study reports the discovery of a gene for resistance to septoria tritici blotch (STB) in two spring wheat cultivars, Courtot and Tonic. The gene, named Stb9, confers resistance to Mycosphaerella graminicola isolate IPO89011. It was mapped by quantitative trait loci (QTL) analysis using an existing map of Courtot × Chinese Spring and was located between markers Xfbb226 (3·6 cM) and XksuF1b (9 cM) on the long arm of chromosome 2B. Markers linked to Stb9 in Courtot were then shown to be linked to resistance to IPO89011 in F3 families of Tonic × Longbow. Allelism tests in which Tonic was crossed with Courtot confirmed that Tonic has a gene for resistance to IPO89011 at or very close to the Stb9 locus. SSR markers flanking Stb9 may be used in marker-assisted selection to introgress this gene into winter cultivars or in spring wheat breeding programmes outside Europe. [ABSTRACT FROM AUTHOR]

• Here, the aim was to understand the cellular and genetic basis of the Triticum monococcum– Mycosphaerella graminicola interaction. • Testing for 5 yr under UK field conditions revealed that all 24 T. monococcum accessions exposed to a high level of natural inocula were fully resistant to M. graminicola. When the accessions were individually inoculated in the glasshouse using an attached leaf seeding assay and nine previously characterized M. graminicola isolates, fungal sporulation was observed in only three of the 216 interactions examined. Microscopic analyses revealed that M. graminicola infection was arrested at four different stages post-stomatal entry. When the inoculated leaves were detached 30 d post inoculation and incubated at 100% humidity, abundant asexual sporulation occurred within 5 d in a further 61 interactions. • An F2 mapping population generated from a cross between T. monococcum accession MDR002 (susceptible) and MDR043 (resistant) was inoculated with the M. graminicola isolate IPO323. Both resistance and in planta fungal growth were found to be controlled by a single genetic locus designated as TmStb1 which was linked to the microsatellite locus Xbarc174 on chromosome 7Am. • Exploitation of T. monococcum may provide new sources of resistance to septoria tritici blotch disease. [ABSTRACT FROM AUTHOR]

Abstract: The production situation–injury profile paradigm can be used as a framework to assess the harmfulness of multiple-pest complexes in a changing agriculture. A mechanistic simulation model for wheat, WHEATPEST, was developed to incorporate drivers of (i) variable production situations and (ii) their related injury profiles. The model simulates the harmful effects of pathogens, pests, and weeds in a simple, open, generic manner. Simulation drivers were derived from published reports, in particular through a meta-analysis of highly detailed farmers’ field surveys in the United Kingdom and the Netherlands. Preliminary analysis of the model''s performances indicates that WHEATPEST conforms with available published reports in a range of production situations and injury profiles. While improvement on some components of the model are discussed, this work points at the need for the collection of cross-disciplinary, reasonably accurate, and standardised data at a system''s level, and at the usefulness of modelling tools for basic research and policy. [Copyright &y& Elsevier]

Abstract: Large-scale cDNA-AFLP profiling identified numerous genes with increased expression during the resistance response of wheat to the Septoria tritici blotch fungus, Mycosphaerella graminicola. To test whether these genes were associated with resistance responses, primers were designed for the 14 that were most strongly up-regulated, and their levels of expression were measured at 12 time points from 0 to 27 days after inoculation (DAI) in two resistant and two susceptible cultivars of wheat by real-time quantitative polymerase chain reaction. None of these genes was expressed constitutively in the resistant wheat cultivars. Instead, infection of wheat by M. graminicola induced changes in expression of each gene in both resistant and susceptible cultivars over time. The four genes chitinase, phenylalanine ammonia lyase, pathogenesis-related protein PR-1, and peroxidase were induced from about 10- to 60-fold at early stages (3h–1 DAI) during the incompatible interactions but were not expressed at later time points. Nine other genes (ATPase, brassinosteroid-6-oxidase, peptidylprolyl isomerase, peroxidase 2, 40S ribosomal protein, ADP-glucose pyrophosphorylase, putative protease inhibitor, methionine sulfoxide reductase, and an RNase S-like protein precursor) had bimodal patterns with both early (1–3 DAI) and late (12–24 DAI) peaks of expression in at least one of the resistant cultivars, but low if any induction in the two susceptible cultivars. The remaining gene (a serine carboxypeptidase) had a trimodal pattern of expression in the resistant cultivar Tadinia. These results indicate that the resistance response of wheat to M. graminicola is not completed during the first 24h after contact with the pathogen, as thought previously, but instead can extend into the period from 18 to 24 DAI when fungal growth increases dramatically in compatible interactions. Many of these genes have a possible function in signal transduction or possibly as regulatory elements. Expression of the PR-1 gene at 12h after inoculation was much higher in resistant compared to susceptible recombinant-inbred lines (RILs) segregating for the Stb4 and Stb8 genes for resistance. Therefore, analysis of gene expression could provide a faster method for separating resistant from susceptible lines in research programs. Significant differential expression patterns of the defense-related genes between the resistant and susceptible wheat cultivars and RILs after inoculation with M. graminicola suggest that these genes may play a major role in the resistance mechanisms of wheat. [Copyright &y& Elsevier]

The article reports on the CYP51 gene' mutations correlated with changes in sensitivity to sterol 14α-demethylation (DMIs) inhibitors in field isolates of Mycosphaerella graminicola. In France, this causal agent of wheat leaf blotch is controlled by foliar applications of fungicides. With the latest generalization of resistance to strobilurins (QoIs), reliable control is primarily dependent upon inhibitors of sterol DMIs. The sensitivity assay based on in vitro effects of fungicides towards germ-tube elongation allowed the characterization of seven DMI-resistant phenotypes as showed in this research. It also mentions that in some isolates mutations in codons 316 and 317 were found exhibiting low resistance factors towards most DMIs.

• Hydrogen peroxide (H2O2) is reported to inhibit biotrophic but benefit necrotrophic pathogens. Infection by necrotrophs can result in a massive accumulation of H2O2 in hosts. Little is known of how pathogens with both growth types are affected (hemibiotrophs). The hemibiotroph, Septoria tritici, infecting wheat ( Triticum aestivum) is inhibited by H2O2 during the biotrophic phase, but a large H2O2 accumulation occurs in the host during reproduction. • Here, we infiltrated catalase, H2O2 or water into wheat during the biotrophic or the necrotrophic phase of S. tritici and studied the effect of infection on host physiology to get an understanding of the survival strategy of the pathogen. • H2O2 removal by catalase at both early and late stages made plants more susceptible, whereas H2O2 made them more resistant. H2O2 is harmful to S. tritici throughout its life cycle, but it can be tolerated. • The late accumulation of H2O2 is unlikely to result from down-regulation of photosynthesis, but probably originates from damage to the peroxisomes during the general tissue collapse, which is accompanied by release of soluble sugars in a susceptible cultivar. [ABSTRACT FROM AUTHOR]

Abstract: MgMfs1, a major facilitator superfamily (MFS) gene from the wheat pathogenic fungus Mycosphaerella graminicola, was identified in expressed sequence tag (EST) libraries. The encoded protein has high homology to members of the drug:H+ antiporter efflux family of MFS transporters with 14 predicted transmembrane spanners (DHA14), implicated in mycotoxin secretion and multidrug resistance. Heterologous expression of MgMfs1 in a hypersensitive Saccharomyces cerevisiae strain resulted in a strong decrease in sensitivity of this organism to a broad range of unrelated synthetic and natural toxic compounds. The sensitivity of MgMfs1 disruption mutants of M. graminicola to most of these compounds was similar when compared to the wild-type but the sensitivity to strobilurin fungicides and the mycotoxin cercosporin was increased. Virulence of the disruption mutants on wheat seedlings was not affected. The results indicate that MgMfs1 is a true multidrug transporter that can function as a determinant of pathogen sensitivity and resistance to fungal toxins and fungicides. [Copyright &y& Elsevier]