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Premise of research. Phylogenetic relationships of Araucariaceae (Coniferophyta, Araucariales) are revised on the basis of the first combined data matrix for the family. Methodology. Taxon sampling includes 39 ingroup species (31 extant, 8 fossils) and outgroup species of all the remaining conifer families. Five fossil Araucaria species, one species of the genus Araucarites, and two species of the extinct genera Wairarapaia and Emwadea were included in the analyses. Character sampling includes 23 genomic regions (19 plastid, 2 nuclear, and 2 mitochondrial) and 62 morphological characters (52 discrete and 10 continuous). The phylogenetic analyses were conducted with equally weighted parsimony. Additionally, several analyses under different taxon- and gene-sampling regimes were analyzed for identifying the causes of the long-lasting controversies in the interrelationships of the three extant genera of Araucariaceeae. Pivotal results. Monophyletic Araucariaceae is the sister group of Podocarpaceae, forming the order Araucariales. Monophyly of Araucaria and Agathis is also strongly supported by the data. The results of both molecular and combined analyses indicate that Wollemia and Agathis form a clade (pagathioid clade) sister to Araucaria. Within Araucaria, the analyses support the monophyly of the four currently recognized sections: Araucaria, Bunya, Intermedia, and Eutacta. Results support the monophyly of living and fossil Araucaria (including Araucarites), whereas the remaining extinct genera are placed as the stem of the agathioid clade. In terms of the sensitivity analyses performed, results suggest that inconsistencies among previous results would be related to ingroup sampling. Conclusions. By means of a combined phylogenetic analysis, we have been able to obtain a strongly supported and well-resolved phylogeny of Araucariaceae that includes both living species and fossil species for the group. This study shows the feasibility and usefulness of phylogenetic analyses that incorporate multiple sources of evidence (molecules/morphology, living/fossil species, discrete/continuous characters). [ABSTRACT FROM AUTHOR]

Reflectance Transforming Imaging (RTI) produces photographs in which the angle of the light can be changed at will, allowing to investigate remotely minute details of the 3D structure of sub-planar objects. Here we apply this technique to the type specimen of Gingkophyllum grassetii , a vegetative shoot with putative ginkgophyte affinities from the early Permian of Lodève (France). Gingkophyllum grassetii , the type species of the genus, was originally described by Saporta in 1875 and has never been illustrated other than by drawings representing only portions of the shoot. Using RTI, we describe and illustrate the specimen and discuss some key features, such as the arrangement of the leaves on the shoot or the presence of abundant secretory structures. Through an historical account, we show how the lack of illustration led to confusion about the morphology of Ginkgophyllum and we discuss the importance of reinvestigating type specimens of Paleozoic ginkgophyte taxa in order to clarify their taxonomy and better understand their evolutionary history. The sharing of RTI files is one example of approaches that can be further developed to improve remote access to specimens. • Ginkgophyllum grassetii , the type species of the genus, is a putative Permian ginkgophyte. • Lack of published photos led to confusions about Ginkgophyllum morphology and taxonomy. • We re-investigate the type specimen using Reflectance Transforming Imaging. • We provide new information on the morpho-anatomy of the specimen. • RTI files could be further used to improve remote access to collection specimens. [ABSTRACT FROM AUTHOR]

Two new compression-impression species of the Osmundaceae described from reproductive and vegetative remains are erected for the first time from the Early Jurassic of Argentina. Todites cacereii sp. nov. and Osmundopsis rafaelii sp. nov. demonstrate that two main osmundaceous reproductive morphologies; i.e., differentiated reduced or unreduced fertile laminae were already present and widespread in Gondwana by this time. On the basis of a discussion of relevant morphological characters, the phylogenetic meaning of the fossils Todites and Osmundopsis is explored. Likewise, the systematics and taxonomy of fossil taxa and their relationships with modern ones are discussed in light of current hypotheses. In this regard, because clear synapomorphies or apomorphies are not yet fully understood, it is suggested that fossil representatives are better placed in morphotaxa (Todites, Osmundopsis) than in any current genus. Nonetheless, the clear record of characters of the leptopteroid clade by the early Jurassic proves to be older than previously assumed, which also points to an earlier time of origination for the osmundaceous ferns. [ABSTRACT FROM AUTHOR]

A common problem in phylogenetic analysis is the presence of unstable taxa that are depicted in multiple positions in optimal topologies. These uncertainties are reflected in strict consensus trees with polytomies that hamper the interpretation of the phylogenetic results. We propose a protocol for detecting unstable branches (either terminal taxa or clades) and identifying particular characters related to their instability in cladistic analysis. This procedure is based on an iterative evaluation of the agreement of triplets among the optimal topologies (i.e. most-parsimonious trees, MPTs) and examination of character optimizations on these trees. Different types of characters underlying the unstable behaviour of taxa are detected: those with conflicting scorings that support alternative positions of problematic taxa and those with missing data in the unstable taxa that could reduce their instability if they are scored. The entire process is automated through a TNT script that provides a list of characters related to the instability of each unstable taxon. The outcome of this procedure can be used as a guide for further research efforts focused on the revision or addition of (morphological or molecular) phylogenetic data for elucidating the affinities of unstable taxa. © The Willi Hennig Society 2009. [ABSTRACT FROM AUTHOR]

Premise of research. The Río Genoa Formation of Argentine Patagonia hosts Early Permian fossil assemblages that document levels of plant diversity rare among coeval floras. Ongoing work to exhaustively characterize the diversity of these assemblages is key to understanding Permian vegetation and plant evolution. A new fern type identified in the Río Genoa Formation exhibits a novel combination of characters that required taxonomic assessment. Methodology. Observations and measurements of vegetative and reproductive morphology of compression fossils were used in a comparative framework to address the taxonomic placement of the fossils. Pivotal results. The new fern, Floratheca apokalyptika gen. et sp. nov., is characterized by small pinnules with a free base, weakly lobed margin, highly decurrent midvein, and rarely branched lateral veins, as well as radially symmetrical synangia with stellate dehiscence, consisting of six spindle-shaped sporangia. This unique combination of characters distinguishes Floratheca from the more than 25 Permo-Carboniferous marattialean genera known from compressions. Floratheca exhibits variable synangium morphology during development and variation in pinnule base morphology due to a combination of adaxial-abaxial asymmetry of ultimate rachises and taphonomic effects. Conclusions. Floratheca is one of only three late Paleozoic bona fide marattialean compression genera endemic to Gondwana and the second late Paleozoic endemic South American marattialean with preserved fertile structures. Floratheca adds to an increasing diversity of fossils that diminish the disparity between the Southern and Northern Hemispheres, in terms of the extent and intensity of exploration of the plant fossil record, currently skewed taxonomically toward Northern Hemisphere taxa. Variability of synangium and pinnule base morphology in Floratheca cautions against potential taxonomic inflation produced by establishment of new taxa based on small numbers of specimens and incomplete understanding of development and taphonomy. [ABSTRACT FROM AUTHOR]