18 results on '"Braun, Uwe"'
Search Results
2. Sawadaea nankinensis comb. nov.: a powdery mildew fungus of Acer buergerianum
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Takamatsu, Susumu, Ito, Terumitsu, Yamamoto, Hideo, and Braun, Uwe
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- 2008
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3. Phyllactinia chubutiana: a new species of Erysiphales from Patagonia (Argentina)
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Havrylenko, Maria, Takamatsu, Susumu, Divarangkoon, Rangsi, and Braun, Uwe
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- 2006
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4. Phylogenetic relationships and generic affinity of Uncinula septata inferred from nuclear rDNA sequences
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Takamatsu, Susumu, Braun, Uwe, and Limkaisang, Saranya
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- 2005
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5. Beyond Nuclear Ribosomal DNA Sequences: Evolution, Taxonomy, and Closest Known Saprobic Relatives of Powdery Mildew Fungi (Erysiphaceae) Inferred From Their First Comprehensive Genome-Scale Phylogenetic Analyses.
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Vaghefi, Niloofar, Kusch, Stefan, Németh, Márk Z., Seress, Diána, Braun, Uwe, Takamatsu, Susumu, Panstruga, Ralph, and Kiss, Levente
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POWDERY mildew diseases ,RIBOSOMAL DNA ,NUCLEAR DNA ,DNA sequencing ,CROPS ,HORTICULTURAL crops ,MOLECULAR phylogeny - Abstract
Powdery mildew fungi (Erysiphaceae), common obligate biotrophic pathogens of many plants, including important agricultural and horticultural crops, represent a monophyletic lineage within the Ascomycota. Within the Erysiphaceae , molecular phylogenetic relationships and DNA-based species and genera delimitations were up to now mostly based on nuclear ribosomal DNA (nrDNA) phylogenies. This is the first comprehensive genome-scale phylogenetic analysis of this group using 751 single-copy orthologous sequences extracted from 24 selected powdery mildew genomes and 14 additional genomes from Helotiales , the fungal order that includes the Erysiphaceae. Representative genomes of all powdery mildew species with publicly available whole-genome sequencing (WGS) data that were of sufficient quality were included in the analyses. The 24 powdery mildew genomes included in the analysis represented 17 species belonging to eight out of 19 genera recognized within the Erysiphaceae. The epiphytic genera, all but one represented by multiple genomes, belonged each to distinct, well-supported lineages. Three hemiendophytic genera, each represented by a single genome, together formed the hemiendophytic lineage. Out of the 14 other taxa from the Helotiales , Arachnopeziza araneosa , a saprobic species, was the only taxon that grouped together with the 24 genome-sequenced powdery mildew fungi in a monophyletic clade. The close phylogenetic relationship between the Erysiphaceae and Arachnopeziza was revealed earlier by a phylogenomic study of the Leotiomycetes. Further analyses of powdery mildew and Arachnopeziza genomes may discover signatures of the evolutionary processes that have led to obligate biotrophy from a saprobic way of life. A separate phylogeny was produced using the 18S, 5.8S, and 28S nrDNA sequences of the same set of powdery mildew specimens and compared to the genome-scale phylogeny. The nrDNA phylogeny was largely congruent to the phylogeny produced using 751 orthologs. This part of the study has revealed multiple contamination and other quality issues in some powdery mildew genomes. We recommend that the presence of 28S, internal transcribed spacer (ITS), and 18S nrDNA sequences in powdery mildew WGS datasets that are identical to those determined by Sanger sequencing should be used to assess the quality of assemblies, in addition to the commonly used Benchmarking Universal Single-Copy Orthologs (BUSCO) values. [ABSTRACT FROM AUTHOR]
- Published
- 2022
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6. Phylogeny and taxonomy of Podosphaera filipendulae (Erysiphaceae) revisited.
- Author
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Shu-Yan Liu, Jin, Danni, Götz, Monika, Bradshaw, Michael, Miao Liu, Susumu Takamatsu, and Braun, Uwe
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PHYLOGENY ,POWDERY mildew diseases ,MOLECULAR phylogeny ,NUCLEOTIDES ,RECOMBINANT DNA - Abstract
The phylogeny and taxonomy of Podosphaera filipendulae (including P. filipendulensis, syn. nov.) have been examined. Asian, European and North American collections were examined and the nucleotides sequences of their partial rDNA region were determined. In particular, the relationship between P. filipendulae and P. spiraeae was analysed. The results confirmed P. filipendulae and P. spiraeae as two separate, morphologically similar species. The phylogenetic analysis revealed a similar phylogeny to that of the host genera. Although ITS sequences retrieved from Asian, European and North American specimens of P. filipendulae on various Filipendula spp. are identical to sequences from P. macularis on hop, there is consistently one base substitution at the 5'-end of 28S rRNA gene between the species. This result provides evidence that the hop powdery mildew and P. filipendulae are biologically and morphologically clearly distinguished, and should be maintained as two separate species. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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7. Phylogeny and taxonomy of powdery mildew caused by Erysiphe species on Corylus hosts.
- Author
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Bradshaw, Michael, Braun, Uwe, Meeboon, Jamjan, and Tobin, Patrick
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POWDERY mildew diseases , *BIOLOGICAL classification , *PHYLOGENY , *MOLECULAR phylogeny - Abstract
Erysiphe species (powdery mildews) on Corylus and Ostrya hosts (Betulaceae subfam. Coryloideae) in Asia and North America are widespread pathogens on these economically and ecologically valuable nut crops. An improved understanding of their phylogeny and taxonomy is of ecological and applied importance. Phylogenetic analyses and morphological reexaminations conducted in this study revealed a higher degree of diversity and cryptic speciation than reflected in earlier species concepts. North American collections on C. cornuta, which were previously assigned to E. corylacearum, proved to constitute a species of its own and are herein introduced as E. cornutae, sp. nov. Two additional North American species, E. coryli-americanae, sp. nov. and E. ostryae, sp. nov., have been detected on C. americana and O. virginiana and are described. They are morphologically similar to E. cornutae, but genetically distinct. Based on phylogenetic analyses, E. corylacearum is an Asian species confined to various Asian Corylus species. Sequence data retrieved from Japanese type material of E. corylicola revealed that this species clusters with sequences from E. elevata on Catalpa species, distant from all other Erysiphe species on Corylus. Morphologically similar, yet distinct, specimens on C. sieboldiana, which were previously assigned to E. corylicola, form a distinct, distant clade. The species involved is described herein as E. pseudocorylacearum, sp. nov. Additionally, an unusual infection of C. sieboldiana in Japan by E. syringae has been shown by means of sequence data. The phylogeny and taxonomy of Erysiphe species belonging to the Corylioideae are discussed in detail, and a key to the species concerned is provided. [ABSTRACT FROM AUTHOR]
- Published
- 2021
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8. Morphology and molecular phylogeny of a poorly known species—Erysiphe bulbouncinula (Erysiphaceae) on Koelreuteria paniculata.
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Liu, Li, Tang, Shu‐Rong, Takamatsu, Susumu, Braun, Uwe, Li, Yu, Liu, Shu‐Yan, and Müller, Michael M.
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POWDERY mildew diseases ,MORPHOLOGY ,RECOMBINANT DNA ,MOLECULAR phylogeny - Abstract
Erysiphe bulbouncinula (≡ Bulbouncinula bulbosa) on Koelreuteria paniculata is a powdery mildew native and endemic in China. Fresh samples of this species were collected on K. paniculata in Sichuan Province, China, in 2018. This is the fourth confirmed identification of this species. The original description in 1932 was based on one specimen from Hangzhou and then was described in Nanjing in 1990 and in Taiwan in 1993. The morphology of the new collections of this species is described and illustrated in detail, and agrees well with the original description of the type specimen except for the number of asci (8–16 asci per chasmothecia versus 7–9 asci in the type specimen). To explore the phylogenetic position of this poorly known species, three separate phylogenetic analyses, using partial 28S rDNA and the combination of internal transcribed spacer (ITS) and 28S rDNA sequences, were conducted. The results clearly showed that E. bulbouncinula form a monophyletic clade with strong bootstrap (BS) support (MP = 100%) constituting a sister clade to E. gracilis s. lat., form a subclade with Erysiphe sect. Californiomyces and then form a big group with sect. Typhulochaeta and sect. Uncinula. Phylogenetic results confirm that E. bulbouncinula is more closely allied to Erysiphe than to Phyllactinia. Thus, this species can be maintained in Erysiphe in its current circumscription, confirming Bulbouncinula as a synonym of Erysiphe. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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9. Phylogeny and taxonomy of powdery mildew on Viburnum species.
- Author
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Bradshaw, Michael, Braun, Uwe, Wang, Serena, Liu, Shuyan, Feng, Jing, Shin, Hyeon-Dong, Choi, Young-Joon, Takamatsu, Susumu, Bulgakov, Timur S., and Tobin, Patrick C.
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VIBURNUM , *MOLECULAR phylogeny , *POWDERY mildew diseases , *PHYLOGENY , *EPITOPES , *ECHINOCOCCUS granulosus , *SEQUENCE analysis - Abstract
The phylogeny and taxonomy of powdery mildew on Viburnum species is evaluated and discussed. Morphological and phylogenetic analyses revealed two new species and demonstrated that Erysiphe hedwigii and E. viburni should be reduced to synonymy and are referred to herein as E. viburni. The two new species, E. viburniphila and E. pseudoviburni, previously hidden under E. viburni (including E. hedwigii), is described on the basis of European, North American, and East Asian powdery mildew collections on Viburnum edule, V. tinus, V. odoratissimum var. awabuki, and V. sieboldii. The sexual morph of E. viburniphila is similar to that of E. viburni; however, morphological differences exist in their asexual morphs. Analyses of sequences from the internal transcribed spacer (ITS) and 28S genomic regions of Erysiphe species obtained on Viburnum species (and other closely allied Eryisphe species) throughout the world reveled that E. viburniphila and E. pseudoviburni are in two different monophyletic groups that are separate from all other Erysiphe species. Erysiphe hedwigii and E. viburni on Viburnum species have often been recognized as separate species based on morphological differences in the size of their chasmothecia and the number of chasmothecial appendages. Taxonomic conclusions based on these morphological distinctions within these species are unreliable (these characters are rather variable and often have overlapping ranges). The present phylogenetic analyses suggest that E. hedwigii has to be reduced to synonymy with E. viburni. To fix the application of the species names E. hedwigii and E. viburni, epitypes have been designated for these taxa with ex-epitype sequences. Additionally, the Asian species E. miranda is phylogenetically confirmed as a species of its own, described in detail and discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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10. Morphophylogenetic analyses revealed that Podosphaera tridactyla constitutes a species complex.
- Author
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Meeboon, Jamjan, Takamatsu, Susumu, and Braun, Uwe
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POWDERY mildew diseases ,SPECIES ,EPITOPES ,MOLECULAR phylogeny ,SEQUENCE analysis ,RIBOSOMAL DNA - Abstract
Podosphaera tridactyla (s. lat.) is a powdery mildew species occurring on a wide range of Prunus spp. almost worldwide. We have investigated the phylogeny of the Po. tridactyla complex, with special emphasis on potential aspects of cryptic speciation. The results suggested that Po. tridactyla represents a species complex consisting of at least 12 different species. Based on detailed morphological examinations and molecular sequence analyses, we propose dividing Po. tridactyla s. lat. into 10 species, encompassing 7 new species (Po. ampla, Po. pruni-avium, Po. pruni-cerasoidis, Po. prunigena, Po. pruni-lusitanicae, Po. prunina, and Po. pruni-japonicae) and 3 known species (Po. longiseta, Po. salatai, and Po. tridactyla s. str.). Oidium passerinii on Pr. laurocerasus is confirmed as a synonym of Po. tridactyla s. str. Epitypes are designated for Po. tridactyla and Oidium passerinii. [ABSTRACT FROM AUTHOR]
- Published
- 2020
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11. Phylogeny and taxonomy of Podosphaera cerasi, sp. nov., and Podosphaera prunicola sensu lato.
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Moparthi, Swarnalatha, Grove, Gary G., Pandey, Binod, Bradshaw, Michael, Latham, Suzanne Rooney, Braun, Uwe, Meeboon, Jamjan, and Romberg, Megan
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MOLECULAR phylogeny ,POWDERY mildew diseases - Abstract
Powdery mildew of Prunus spp. is a significant disease in most cherry growing regions of Washington, USA. Powdery mildews on Prunus virginiana and Pr. avium were previously assigned to Podosphaera clandestina s. lat. (= Po. oxyacanthae) or Po. prunicola. In this report, we confirm the presence of two distinct Podosphaera species on these hosts. Phylogenetic analyses of nuc rDNA sequences from the internal transcribed spacer region (ITS1-5.8S-ITS2 = ITS) and 28S subunit confirmed the presence of two distinct species. A morphological comparison with type material of Po. prunicola and additional collections demonstrated that the powdery mildew on Pr. virginiana (including var. demissa and var. melanocarpa) is in fact Po. prunicola. The powdery mildew on Pr. avium is genetically, morphologically, and biologically distinct from Po. prunicola and is described here as the new species Po. cerasi. Cross-inoculation experiments confirmed that these two species are host specific. Podosphaera prunicola was unable to colonize Pr. avium, whereas Po. cerasi was unable to colonize Pr. virginiana. Morphological reexamination of numerous specimens identified as Po. prunicola on a broad range of Prunus species suggests that Po. prunicola is probably confined to species in Prunus subgen.Padus (= Prunus subgen. Cerasus sect. Laurocerasus, including sect. Padus), with Pr. virginiana as the principal host. Podosphaera cerasi occurs on hosts in Prunus subgen. Cerasus, and our work confirms a newly described species of powdery mildew on Pr. avium. This work also includes the first documented and genetically proven European record of Po. prunicola on Pr. serotina and its widespread occurrence in the United States. [ABSTRACT FROM AUTHOR]
- Published
- 2019
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12. Leveillula buddlejae sp. nov., a new species with an asexual morph resembling phylogenetically basal Phyllactinia species.
- Author
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Adhikari, Mahesh K., Meeboon, Jamjan, Takamatsu, Susumu, and Braun, Uwe
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SCROPHULARIACEAE ,PLANT morphology ,POWDERY mildew diseases ,MOLECULAR phylogeny ,PHYLLACTINIA ,PLANT genetics - Abstract
An asexual morph of a powdery mildew was found on Buddleja asiatica (Scrophulariaceae) in Nepal. The morphological traits of this powdery mildew strongly resemble those of Phyllactinia species (including Ovulariopsis ) belonging to a phylogenetically basal group closely related to Leveillula species, but phylogenetic examinations and analyses clearly showed that this fungus pertains to Leveillula . Within the latter genus, it seems to be allied to L. duriaei , but clearly differs from this species in having conidiophores arising from superficial hyphae and narrower conidia with different length/width ratios. Therefore, the powdery mildew on B. asiatica is described as Leveillula buddlejae sp. nov. [ABSTRACT FROM AUTHOR]
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- 2018
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13. Powdery mildew of Chrysanthemum × morifolium : phylogeny and taxonomy in the context of Golovinomyces species on Asteraceae hosts.
- Author
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Bradshaw, Michael, Braun, Uwe, Götz, Monika, Meeboon, Jamjan, and Takamatsu, Susumu
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CHRYSANTHEMUM morifolium , *POWDERY mildew diseases , *ASTERACEAE , *MOLECULAR phylogeny , *NUCLEIC acid isolation methods , *POLYMERASE chain reaction - Abstract
The taxonomic history of the common powdery mildew ofChrysanthemum×morifolium(chrysanthemum, florist’s daisy), originally described in Germany asOidium chrysanthemi, is discussed. The position ofO. chrysanthemiwas investigated on the basis of morphological traits and molecular phylogenetic analyses. Based on the results of this study, this species, which is closely related toGolovinomyces artemisae, was reassessed and reallocated toGolovinomyces. The phylogenetic analysis and taxonomic reassessment of the chrysanthemum powdery mildew is supplemented by a morphological description, a summary of its worldwide distribution data, and a brief discussion of the introduction of this fungus to North America.G. chrysanthemidiffers from trueG. artemisiaein that it has much longer conidiophores, is not constricted at the base, and has much larger and most importantly longer conidia. The close affinity ofGolovinomycestoArtemisiaandChrysanthemumspecies signifies a coevolutionary event between the powdery mildews concerned and their host species in the subtribeArtemisiinae(AsteraceaetribeAnthemideae). This conclusion is fully supported by the current phylogeny and taxonomy of the host plant genera and the coevolution that occurred with the host and pathogen. The following powdery mildew species, which are associated with hosts belonging to the tribeAnthemideaeof theAsteraceae, are epitypified:Alphitomorpha depressaβartemisiae(≡Alphitomorpha artemisiae),Erysiphe artemisiae, andOidium chrysanthemi. Erysiphe macrocarpais neotypified. Their sequences were retrieved from the epitype collections and have been added to the phylogenetic tree.Golovinomyces orontii, an additional powdery mildew species onChrysanthemum×morifolium, is reported. This species is rarely found as a spontaneous infection and was obtained from inoculation experiments. [ABSTRACT FROM PUBLISHER]
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- 2017
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14. Powdery mildews (Ascomycota, Erysiphales) on Fontanesia phillyreoides and Jasminum fruticans in Turkey.
- Author
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Kabaktepe, Sanli, Akata, Ilgaz, Siahaan, Siska A.S., Takamatsu, Susumu, and Braun, Uwe
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FUNGI ,ASEXUAL reproduction ,ASCOMYCETES ,PHYLLACTINIA ,FUNGAL morphology ,JASMINE - Abstract
Asexual and sexual morphs of powdery mildews on Fontanesia phillyreoides and Jasminum fruticans , two hitherto unknown host species, have recently been collected in Turkey. Analyses of morphological traits and molecular sequence data led to identifications of the causal agents of the powdery mildew diseases involved. Fontanesia phillyreoides was infected by Phyllactinia fraxini , and the powdery mildew on Jasminum fruticans can be classified as Erysiphe cf. aquilegiae . The latter host showed traces of a co-infection with a second powdery mildew (only asexual morph) belonging to the genus Phyllactinia (= Ovulariopsis ) and morphologically well agreeing with P. fraxini . [ABSTRACT FROM AUTHOR]
- Published
- 2017
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15. Early evolution of endoparasitic group in powdery mildews: molecular phylogeny suggests missing link between Phyllactinia and Leveillula.
- Author
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Takamatsu, Susumu, Siahaan, Siska A. S., Moreno-Rico, Onésimo, de Álvarez, Maria G. Cabrera, and Braun, Uwe
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ENDOPARASITES ,PHYLLACTINIA ,MOLECULAR phylogeny ,POWDERY mildew diseases ,PARASITE evolution ,ERYSIPHACEAE - Abstract
Of the 17 genera of the Erysiphaceae, only four genera (viz. Leveillula, Phyllactinia, Pleochaeta and Queirozia) exhibit (partly) endoparasitism. To investigate early evolution of this endoparasitic nature, we performed molecular phylogenetic analyses of powdery mildews belonging to the tribe Phyllactinieae collected in North and South America. The most ancestral taxa in the tribe Phyllactinieae belong to the Pleochaeta/Queirozia group, from which the genus Phyllactinia was derived. Finally, the truly endoparasitic genus Leveillula emerged from a part of Phyllactinia. The present study showed clear evolutional polarity in the powdery mildews concerned (that is, partly endoparasitic group evolved from ectoparasitic group) and then a truly endoparasitic group emerged from a partly endoparasitic group. In addition, a group with distinctly dimorphic conidia proved to be basal in the Phyllactinieae, and a group without distinctly dimorphic conidia was derived from that group. The present analyses clearly showed that Leveillula derived from a part of the "Basal Phyllactinia group". However, all sister taxa to Leveillula were distributed in North and South America. Because the putative geographic origin of Leveillula is assumed to be Central and Western Asia or the Mediterranean region, we postulate a missing link during the evolution of Leveillula from Phyllactinia. Based on the present phylogenetic studies and the new rules of the International Code of Nomenclature for algae, fungi, and plants (McNeill et al. 2012), the following new species and taxonomic re-allocations are proposed: Phyllactinia bougainvilleae sp. nov., Ph. caricae comb. nov., Ph. caricicola comb. nov., Ph. durantae comb. nov., Ph. leveilluloides sp. nov., Ph. obclavata comb. nov., and Ph. papayae comb. nov. [ABSTRACT FROM AUTHOR]
- Published
- 2016
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16. Phylogenetic relationships and generic affinity ofUncinula septatainferred from nuclear rDNA sequences.
- Author
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Takamatsu, Susumu, Braun, Uwe, and Limkaisang, Saranya
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ERYSIPHALES ,RECOMBINANT DNA ,NUCLEOTIDE sequence ,POWDERY mildew diseases ,MOLECULAR phylogeny - Abstract
Based on 18S, 5.8S, and 28S rDNA sequences, the phylogenetic position ofUncinula septatawithin the Erysiphales has been inferred. Although appendages of the ascomata are uncinula like, i.e., unbranched with curved-coiled apices,U. septatais situated at the very base of the large Erysiphales cluster, far away from the “pseudoidium clade” (Erysiphe emend., includingMicrosphaeraandUncinula). Morphologically,U. septatadiffers from the species ofErysiphesect.Uncinula(=Uncinula) in having terminal, pluriseptate ascoma appendages, curved ascospores, and the absense of an anamorph. This species is a basal, tree-inhabiting powdery mildew with some additional ancestral characteristics, viz., uncinula-like appendages and 8-spored asci. The new genusParauncinulawithU. septataas the type species is proposed.Uncinula curvispora(=U. septatavar.curvispora) is tentatively maintained as a separate species, which is also assigned toParauncinula. [ABSTRACT FROM AUTHOR]
- Published
- 2005
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17. A morphologically ill-founded powdery mildew species, Pleochaeta indica, is recognized as a phylogenetic species based on the analysis of the nuclear ribosomal DNA sequences
- Author
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Kiss, Levente, Khosla, Kishore, Jankovics, Tünde, Niinomi, Seiko, Braun, Uwe, and Takamatsu, Susumu
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MORPHOLOGY , *WHEAT powdery mildew fungus , *EUROPEAN hackberry - Abstract
Abstract: Morphological characteristics of a powdery mildew fungus found on Celtis australis in the Indian Himalayas coincided with those of Pleochaeta indica, described from this tree species in India, as well with those of P. shiraiana, known to infect C. australis and other plant species in Asia. This suggested that the original description of P. indica based on morphological patterns was not well founded and this taxon could be reduced to synonymy with P. shiraiana. However, phylogenetic analyses of the rDNA 28S and ITS sequences determined in some Indian Pleochaeta specimens from C. australis showed that this fungus is closely related, but not identical to P. shiraiana infecting C. sinensis in Japan which served as the basis of the original description of P. shiraiana. Molecular clock analysis of the ITS region and that of the 28S rDNA indicated that the split between the Japanese P. shiraiana infecting C. sinensis and Pleochaeta sp. infecting C. australis in India may have occurred 2.0–8.5 million years ago in the Pliocene and may have coincided with the formation of the Himalayan mountains and the global cooling of the Earth during the late Tertiary. Thus, P. indica is recognized in this study as a distinct phylogenetic species, although our morphological study showed that its description as a morphological species was not well founded. This is a striking example of a cryptic species which is genetically different from close relatives but cannot be distinguished from them based on morphology. [Copyright &y& Elsevier]
- Published
- 2006
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18. Metulocladosporiella gen. nov. for the causal organism of Cladosporium speckle disease of banana
- Author
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Crous, Pedro W., Schroers, Hans-Josef, Groenewald, Johannes Z., Braun, Uwe, and Schubert, Konstanze
- Subjects
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CLADOSPORIUM , *LEAF spots , *HYPHOMYCETES , *NUCLEOTIDE sequence , *DOTHIDEALES , *FUNGAL genetics - Abstract
Abstract: Cladosporium musae, a widespread leaf-spotting hyphomycete on Musa spp., is genetically and morphologically distinct from Cladosporium s. str. (Davidiella anamorphs, Mycosphaerellaceae, Dothideales). DNA sequence data derived from the ITS and LSU gene regions of C. musae isolates show that this species is part of a large group of hyphomycetes in the Chaetothyriales with dematiaceous blastoconidia in acropetal chains. Cladosporium adianticola, a foliicolous hyphomycete known from leaf litter in Cuba is also a member of this clade and is closely related to C. musae. A comparison with other genera in the Cladosporium complex revealed that C. musae belongs to a lineage for which no generic name is currently available, and for which the genus Metulocladosporiella gen. nov. is proposed. Two species of Metulocladosporiella are currently known, namely M. musae, which is widely distributed, and M. musicola sp. nov., which is currently known from Africa. [Copyright &y& Elsevier]
- Published
- 2006
- Full Text
- View/download PDF
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