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Start Over Author "Maes, G.E." Topic microsatellite repeats
4 results on '"Maes, G.E."'

1. Permanent genetic resources added to molecular ecology resources database 1 august 2011-30 september 2011

Author

A'Hara , S.W., Amouroux , P., Argo , Emily.E., Avand-Faghih , A., Barat , Ashoktaru, Barbieri , Luiz, Bert , Theresa M., Blatrix , R., Blin , Aurelie, Bouktila , D., Broome , A., Burban , Christian, Capdevielle-Dulac , C., Casse , N., Chandra , Suresh, Cottrell , J.E., Crawford , Charles R., Davis , Michelle C., Delatte , H., Desneux , Nicolas, Djieto-Lordon , C., Dubois , M.P., El-Mergawy , A.A.M., Gallardo-Escarate , C., Garcia , M., Gardiner , Mary M., Guillemaud , Thomas, Haye , P.A., Hellemans , B., Hinrichsen , P., Hyun Jeon , J.I., Kerdelhue , Carole, Kharrat , I., Labbe , Ellen M., Lahood , Eric, Legoff , Isabelle, Li , H., Liu , S.S., Liu , Y.G., Long , D., Maes , G.E., Magnoux , Emmanuelle, Makni , H., Makni , M., Malausa , Thibaut, Mckey , D., McMillen-Jackson , Annel L., Mendez , M.A., Mezghani-Khemakhem , M., Michel , Andy P., Paul , Moran, Muriel-Cunha , Janice, NIBOUCHE , S., Normand , F., Palkovacs , Eric P., Pande , Veena, Parmentier , K., Peccoud , J., Piats-Check , D., Puchulutegui , Cécilia, Ramos , R., Ravest , G., Richner , Heinz, Robbens , J., Rochat , Didier, Rousselet , Jérôme, Saladin , Verena, Sauve , M., Schlei , Ora, Schultz , Thomas F., Scobie , A.R., Segovia , N.I., Seyoum , Seifu, Silvain , J.F., Tabone , Elisabeth, Van Houdt , J.K.J., Vandamme , S.G., Volckaert , A.M., Wenburg , John, Willis , Theodore V., Ye , N.H., Zhang , W., Zhang , Y.X., Forest Research, Northern Research Station, The Roslin Institute, Fonctionnement agroécologique et performances des systèmes de cultures horticoles ( HORTSYS ), Centre de Coopération Internationale en Recherche Agronomique pour le Développement ( CIRAD ), Université de la Réunion ( UR ), Marine Conservation Molecular Facility, Marine Laboratory, Nicholas School of the Environment, Duke university [Durham], Iranian Research Institute of Plant Protection, Directorate of Coldwater Fisheries Research - Molecular Genetics Laboratory, Indian Council of Agricultural Research, Florida Fish and Wildlife Conservation Commission, Centre d’Ecologie Fonctionnelle et Evolutive ( CEFE ), Université Paul-Valéry - Montpellier 3 ( UM3 ) -Centre international d'études supérieures en sciences agronomiques ( Montpellier SupAgro ) -École pratique des hautes études ( EPHE ) -Institut national de la recherche agronomique [Montpellier] ( INRA Montpellier ) -Université de Montpellier ( UM ) -Centre National de la Recherche Scientifique ( CNRS ) -Institut de Recherche pour le Développement ( IRD [France-Sud] ) -Institut national d’études supérieures agronomiques de Montpellier ( Montpellier SupAgro ), Université Montpellier 2 - Sciences et Techniques ( UM2 ), Institut Sophia Agrobiotech [Sophia Antipolis] ( ISA ), Centre National de la Recherche Scientifique ( CNRS ) -Université Nice Sophia Antipolis ( UNS ), Université Côte d'Azur ( UCA ) -Université Côte d'Azur ( UCA ) -Institut National de la Recherche Agronomique ( INRA ), Unité génomique des insectes ravageurs des cultures d’intérêt agronomique, Université Tunis El-Manar, Institut Supérieur de Biotechnologie Béja, Université de Jendouba ( UJ ), Biodiversité, Gènes & Communautés ( BioGeCo ), Institut National de la Recherche Agronomique ( INRA ) -Université de Bordeaux ( UB ), UR 072, Laboratoire Evolution, Génomes et Spéciation, Institut de Recherche pour le Développement ( IRD ), UPR9034 Evolution, génomes et spéciation, Centre National de la Recherche Scientifique ( CNRS ), Université Paris-Sud - Paris 11 ( UP11 ), Laboratoire Mer, Molécules, Santé (MMS), Université du Mans, Molecular Genetics Laboratory, Directorate of Coldwater Fisheries Research, UMR Peuplements végétaux et bioagresseurs en milieu tropical ( UMR PVBMT - Université de La Réunion ), Faculty of Science, Laboratory of Zoology, Université de Yaoundé I [Yaoundé], Department of Molecular Biology, Genetic Engineering and Biotechnology Research Institute (GEBRI), Minoufia University, Departamento de Oceanografía, Facultad de Ciencias Naturales y Oceanográficas, Centro de Biotecnología, Universidad de Concepción [Chile], Department of Entomology, The Ohio Agricultural Research and Development Center, Ohio State University [Columbus] ( OSU ), Interactions Biotiques et Santé Végétale, Institut National de la Recherche Agronomique ( INRA ), Departamento de Biología Marina, Centro de Estudios Avanzados en Zonas Áridas, Universidad Católica del Norte, Laboratory of Animal Diversity and Systematics, BioGenomics Division, Université Catholique de Louvain ( UCL ), Laboratorio de Biotecnología, Centro de Investigación La Platina, Instituto de Investigaciones Agropecuarias, Biomedic, Centre de Biologie pour la Gestion des Populations ( CBGP ), Centre de Coopération Internationale en Recherche Agronomique pour le Développement ( CIRAD ) -Centre international d'études supérieures en sciences agronomiques ( Montpellier SupAgro ) -Institut national de la recherche agronomique [Montpellier] ( INRA Montpellier ) -Université de Montpellier ( UM ) -Institut de Recherche pour le Développement ( IRD [France-Sud] ) -Institut national d’études supérieures agronomiques de Montpellier ( Montpellier SupAgro ), Unité génomique des insectes ravageurs des cultures d’intérêt agronomique, Faculté des Sciences de Tunis, Department of Biology, University of Maine, Conservation Biology Division, Northwest Fisheries Science Center, Jiangsu Provincial Key Laboratory of Coastal Wetland Bioresources and Environmental Protection, Yancheng Teachers University, Ocean University of China, Shandong Entry-Exit Inspection and Quarantine Bureau, Plantlife Scotland, Laboratory of Animal Diversity and Systematics, BioGenomics, Unité de recherche Zoologie Forestière ( UZF ), Institut Supérieur de l’Animation pour la Jeunesse et la Culture, Université de Tunis, Laboratorio de Genética y Evolución, Facultad de Ciencias, Universidad de Santiago de Chile [Santiago] ( USACH ), Faculdade de Ciências Biológicas, Universidade Federal do Pará, Department of Biotechnology, Kumaon University, Institute for Agricultural and Fisheries Research, Santiago, Syngenta Chili, Institute of Ecology and Evolution, Departement Evolutionary Ecology, University of Bern, Physiologie de l'Insecte, Signalisation et Communication [Versailles] ( PISC ), Conservation Genetics Laboratory, United States Fish and Wildlife Service ( USFWS ), Cairngorms Rare Plants Project, Scottish Natural Heritage, Laboratory of Animal Diversity and Systematics, BioGenomics Division, Laboratory for Cytogenetics and Genome Research, Department of Environmental Science, Division of EcoScience, EWHA Womans University ( EWHA ), Yellow Sea Fisheries Research Institute, Chinese Academy of Fishery Sciences, and Shandong Agricultural University ( SDAU )

Subjects
animals, fishes genetics, insects genetics, databases genetic, pinus genetics, molecular sequence data, microsatellite repeats, insecte, génétique, invertebrates genetics, [ SDV.EE ] Life Sciences [q-bio]/Ecology, environment
Abstract

This article documents the addition of 299 microsatellite marker loci and nine pairs of single-nucleotide polymorphism (SNP) EPIC primers to the Molecular Ecology Resources (MER) Database. Loci were developed for the following species: Alosa pseudoharengus, Alosa aestivalis, Aphis spiraecola, Argopecten purpuratus, Coreoleuciscus splendidus, Garra gotyla, Hippodamia convergens, Linnaea borealis,Menippe mercenaria,Menippe adina, Parus major, Pinus densiflora, Portunus trituberculatus, Procontarinia mangiferae, Rhynchophorus ferrugineus, Schizothorax richardsonii, Scophthalmus rhombus, Tetraponera aethiops, Thaumetopoea pityocampa, Tuta absoluta and Ugni molinae. These loci were cross-tested on the following species: Barilius bendelisis, Chiromantes haematocheir, Eriocheir sinensis, Eucalyptus camaldulensis, Eucalyptus cladocalix, Eucalyptus globulus, Garra litaninsis vishwanath, Garra para lissorhynchus, Guindilla trinervis, Hemigrapsus sanguineus, Luma chequen. Guayaba, Myrceugenia colchagu¨ensis, Myrceugenia correifolia, Myrceugenia exsucca, Parasesarma plicatum, Parus major, Portunus pelagicus, Psidium guayaba, Schizothorax richardsonii, Scophthalmus maximus, Tetraponera latifrons, Thaumetopoea bonjeani, Thaumetopoea ispartensis, Thaumetopoea libanotica, Thaumetopoea pinivora, Thaumetopoea pityocampa ena clade, Thaumetopoea solitaria, Thaumetopoea wilkinsoni and Tor putitora. This article also documents the addition of nine EPIC primer pairs for Euphaea decorata, Euphaea formosa, Euphaea ornata and Euphaea yayeyamana.

Published
2012
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2. Detecting Holocene divergence in the anadromous–freshwater three-spined stickleback (Gasterosteus aculeatus) system.

Author

Raeymaekers, J.A.M., Maes, G.E., Audenaert, E., and Volckaert, F.A.M.

Subjects
*THREESPINE stickleback, *STICKLEBACKS, *GASTEROSTEIFORMES, *FISH genetics, *ISOENZYMES, *MICROSATELLITE repeats
Abstract

The anadromous–freshwater three-spined stickleback (Gasterosteus aculeatus) system allows for inferring the role of adaptation in speciation with a high level of accuracy because the freshwater ecotype has evolved multiple times from a uniform anadromous ancestor. A cause for concern is that independent evolution among drainages is not guaranteed in areas with a poorly resolved glacial history. This is the case for the west European great rivers, whose downstream valleys flanked the southern limit of the late Pleistocene ice sheet. We tested for independent and postglacial colonization of these valleys hypothesizing that the relationships among anadromous and freshwater sticklebacks correspond to a raceme structure. We compared the reduction in plate number accompanying this colonization to the genetic differentiation using 13 allozyme and five microsatellite loci in 350 individuals. Overall microsatellite differentiation (FST = 0.147) was twice as large as allozyme differentiation (FST = 0.066). Although habitat-specific gene flow may mask the ancestral relationships among both ecotypes, levels of microsatellite differentiation supported the hypothesis of raceme-like divergence, reflecting independent colonizations rather than the presence of two distinct evolutionary clades. Under an infinite alleles model and in the absence of gene flow, the observed freshwater divergence might be reached after 440 (microsatellites) to 4500 (allozymes) generations. Hence, the anadromous–freshwater stickleback system most likely diverged postglacially. We conclude that the reduction in plate number in two freshwater basins probably occurred independently, and that its considerable variation among populations is not in agreement with the time since divergence. [ABSTRACT FROM AUTHOR]

Published
2005
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3. Evidence for fine-scale genetic structure and estuarine colonisation in a potential high gene flow marine goby (Pomatoschistus minutus).

Author

Pampoulie, C., Gysels, E.S, Maes, G.E, Hellemans, B., Leentjes, V., Jones, A.G., and Volckaert, F.A.M.

Subjects
ISOENZYMES, GENES, MICROSATELLITE repeats, GENETICS, CHROMOSOMES
Abstract

Marine fish seem to experience evolutionary processes that are expected to produce genetically homogeneous populations. We have assessed genetic diversity and differentiation in 15 samples of the sand goby Pomatoschistus minutus (Pallas, 1770) (Gobiidae, Teleostei) from four major habitats within the Southern Bight of the North Sea, using seven microsatellite and 13 allozyme loci. Despite its high dispersal potential, microsatellite loci revealed a moderate level of differentiation (overall FST= 0.026; overall RST= 0.058). Both hierarchical analysis of molecular variance and multivariate analysis revealed significant differentiation (P< 0.01) between estuarine, coastal and marine samples with micro-satellites, but not with allozymes. Comparison among the different estimators of differentiation (FST and RST) pointed to possible historical events and contemporary habitat fragmentation. Samples were assigned to two breeding units in the estuary and coastal region. Despite this classification, there were indications of a complex and dynamic spatiotemporal structure, which is, most likely, determined by historical events and local oceanic currents. [ABSTRACT FROM AUTHOR]

Published
2004
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4. High genetic diversity and connectivity in a common mesopelagic fish of the Southern Ocean: The myctophid Electrona antarctica

Author

Van de Putte, A.P., Van Houdt, J.K.J., Maes, G.E., Hellemans, B., Collins, M.A., and Volckaert, F.A.M.

Subjects
*ELECTRONA, *FISH genetics, *ANIMAL species, *FISH diversity, *MICROSATELLITE repeats, *GENETIC markers
Abstract

Abstract: Many marine pelagic fish species are characterized by subtle but complex genetic structures and dynamics, depending on the balance between current-mediated larval dispersal and adult active homing behavior. The circumantarctic continuous hydrodynamics of the Southern Ocean is a prime example of a system with a potentially great homogenizing effect among distant populations. We tested this hypothesis by analyzing the contemporary genetic relatedness among populations of a common and endemic mesopelagic fish of the Southern Ocean, Electrona antarctica. Seven newly developed species-specific microsatellite markers were used to investigate patterns of neutral genetic variation in 11 geographically widespread samples (n=400) collected between 2006 and 2007. We detected a very high level of genetic diversity, but a striking lack of genetic differentiation on a circumantarctic scale, indicating large effective population sizes complemented with high levels of admixture. These findings underscore the large scale homogenizing effect of the Southern Coastal Current, leading to a high level of connectivity of our model species in the Southern Ocean, which is congruent with its huge biomass and central role in marine food webs. As an important Antarctic marine living resource this species may as such be managed on a circumantarctic level, although the demographic stability of this stock should be estimated urgently. [Copyright &y& Elsevier]

Published
2012
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