7 results on '"Prakaimuk Saraithong"'
Search Results
2. Roles of TroA and TroR in Metalloregulated Growth and Gene Expression in Treponema denticola
- Author
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Prakaimuk Saraithong, Peter M. Durbin, Spencer W. Olson, Frank C. Gherardini, J. Christopher Fenno, and M. Paula Goetting-Minesky
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Regulation of gene expression ,0303 health sciences ,Treponema ,030306 microbiology ,Operon ,Treponema denticola ,Biology ,biology.organism_classification ,Microbiology ,Cell biology ,Complementation ,03 medical and health sciences ,Gene expression ,Transcriptional regulation ,Molecular Biology ,Gene ,030304 developmental biology - Abstract
The availability of divalent metal cations required as cofactors for microbial metabolism is severely limited in the host environment. Bacteria have evolved highly regulated uptake systems to maintain essential metal homeostasis to meet cellular demands while preventing toxicity. The Tro operon (troABCDR), present in all sequenced Treponema spp., is a member of a highly conserved family of ATP-binding cassette transporters involved in metal cation uptake whose expression is controlled by TroR, a DtxR-like cation-responsive regulatory protein. Transcription of troA responds to divalent manganese and iron (T. denticola) or manganese and zinc (T. pallidum), and metal-dependent TroR binding to the troA promoter represses troA transcription. We report here the construction and complementation of defined T. denticola ΔtroR and ΔtroA strains to characterize (i) the role of TroA in metal-dependent T. denticola growth and (ii) the role of TroR in T. denticola gene expression. We show that TroA expression is required for T. denticola growth under iron- and manganese-limited conditions. Furthermore, TroR is required for the transcriptional regulation of troA in response to iron or manganese, and deletion of troR results in significant differential expression of more than 800 T. denticola genes in addition to troA. These results suggest that (i) TroA-mediated cation uptake is important in metal homeostasis in vitro and may be important for Treponema survival in the host environment and (ii) the absence of TroR results in significant dysregulation of nearly one-third of the T. denticola genome. These effects may be direct (as with troA) or indirect due to dysregulation of metal homeostasis. IMPORTANCETreponema denticola is one of numerous host-associated spirochetes, a group including commensals, pathobionts, and at least one frank pathogen. While most T. denticola research concerns its role in periodontitis, its relative tractability for growth and genetic manipulation make it a useful model for studying Treponema physiology, metabolism, and host-microbe interactions. Metal micronutrient acquisition and homeostasis are highly regulated both in microbial cells and by host innate defense mechanisms that severely limit metal cation bioavailability. Here, we characterized the T. denticolatroABCDR operon, the role of TroA-mediated iron and manganese uptake in growth, and the effects of TroR on global gene expression. This study contributes to our understanding of the mechanisms involved in cellular metal homeostasis required for survival in the host environment.
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- 2020
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3. Bacterial community structure inApis florealarvae analyzed by denaturing gradient gel electrophoresis and 16S rRNA gene sequencing
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Panuwan Chantawannakul, Zhou Chen, Kanokporn Saenphet, Prakaimuk Saraithong, and Yihong Li
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biology ,Firmicutes ,Alphaproteobacteria ,biology.organism_classification ,General Biochemistry, Genetics and Molecular Biology ,Microbiology ,Clostridia ,Insect Science ,Gammaproteobacteria ,Proteobacteria ,Agronomy and Crop Science ,Ecology, Evolution, Behavior and Systematics ,Temperature gradient gel electrophoresis ,Betaproteobacteria ,Apis florea - Abstract
This study characterizes the colonization and composition of bacterial flora in dwarf Asian honeybee (Apis florea) larvae and compares bacterial diversity and distribution among different sampling locations. A. florea larvae were collected from 3 locations in Chiang Mai province, Thailand. Bacterial DNA was extracted from each larva using the phenol-chloroform method. Denaturing gradient gel electrophoresis was performed, and the dominant bands were excised from the gels, cloned, and sequenced for bacterial species identification. The result revealed similarities of bacterial community profiles in each individual colony, but differences between colonies from the same and different locations. A. florea larvae harbor bacteria belonging to 2 phyla (Firmicutes and Proteobacteria), 5 classes (Alphaproteobacteria, Betaproteobacteria, Gammaproteobacteria, Bacilli, and Clostridia), 6 genera (Clostridium, Gilliamella, Melissococcus, Lactobacillus, Saccharibacter, and Snodgrassella), and an unknown genus from uncultured bacterial species. The classes with the highest abundance of bacteria were Alphaproteobacteria (34%), Bacilli (25%), Betaproteobacteria (11%), Gammaproteobacteria (10%), and Clostridia (8%), respectively. Similarly, uncultured bacterial species were identified (12%). Environmental bacterial species, such as Saccharibacter floricola, were also found. This is the first study in which sequences closely related to Melissococcus plutonius, the causal pathogen responsible for European foulbrood, have been identified in Thai A. florea larvae.
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- 2014
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4. Oral Lactobacilli and Dental Caries: A Model for Niche Adaptation in Humans
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Silvia Argimón, Catherine N. Schön, Yihong Li, Page W. Caufield, and Prakaimuk Saraithong
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Ecological niche ,Gastrointestinal tract ,Mouth ,Sucrose ,food and beverages ,Biology ,Dental Caries ,Hydrogen-Ion Concentration ,biology.organism_classification ,Oral cavity ,Microbiology ,Clinical Reviews ,Gastrointestinal Tract ,Streptococcus mutans ,Lactobacillus ,Disease Progression ,Humans ,Colonization ,Anaerobiosis ,Lactobacillus species ,Niche adaptation ,General Dentistry ,Health implications - Abstract
Lactobacilli have been associated with dental caries for over a century. Here, we review the pertinent literature along with findings from our own study to formulate a working hypothesis about the natural history and role of lactobacilli. Unlike most indigenous microbes that stably colonize a host, lactobacilli appear to be planktonic, opportunistic settlers that can gather and multiply only in certain restrictive niches of the host, at least within the oral cavity. We postulate that the following essential requirements are necessary for sustained colonization of lactobacilli in humans: 1) a stagnant, retentive niche that is mostly anaerobic; 2) a low pH milieu; and 3) ready access to carbohydrates. Three sites on the human body meet these specifications: caries lesions, the stomach, and the vagina. Only a handful of Lactobacillus species is found in caries lesions, but they are largely absent in caries-free children. Lactobacilli present in caries lesions represent both a major contributor to caries progression and a major reservoir to the gastrointestinal (GI) tract. We extend the assertion from other investigators that lactobacilli found in the GI tract originate in the oral cavity by proposing that lactobacilli in the oral cavity arise from caries lesions. This, in turn, leads us to reflect on the health implications of the lactobacilli in the mouth and downstream GI and to ponder whether these or any of the Lactobacillus species are truly indigenous to the human GI tract or the oral cavity.
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- 2015
5. Aggregatibacter actinomycetemcomitans serotypes, the JP2 clone and cytolethal distending toxin genes in a Thai population
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Kitti Torrungruang, Bunlue Hengprasith, Prakaimuk Saraithong, Khanchit Likittanasombat, and Panwadee Bandhaya
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Adult ,Male ,Cytolethal distending toxin ,Bacterial Toxins ,Clone (cell biology) ,Dental Plaque ,Exotoxins ,Single-nucleotide polymorphism ,Aggregatibacter actinomycetemcomitans ,Polymorphism, Single Nucleotide ,Microbiology ,Polymorphism (computer science) ,Genotype ,Periodontal Attachment Loss ,Humans ,Serotyping ,Periodontitis ,Analysis of Variance ,Molecular Epidemiology ,Chi-Square Distribution ,biology ,Middle Aged ,biology.organism_classification ,Thailand ,Virology ,Cross-Sectional Studies ,Clinical attachment loss ,Periodontics ,Female ,Restriction fragment length polymorphism ,Polymorphism, Restriction Fragment Length - Abstract
Aim To examine the genetic diversity of Aggregatibacter actinomycetemcomitans in Thai adults. Materials and Methods Subgingival plaque samples from 453 subjects were analysed for A. actinomycetemcomitans serotypes, the presence of the high leukotoxin-producing JP2 clone and cytolethal distending toxin genes (cdtABC) using the polymerase chain reaction technique. In subjects who were positive for cdtABC, restriction fragment length polymorphism analysis was used to identify a single nucleotide polymorphism (SNP) in the cdtB gene at amino acid position 281. The extent and severity of periodontal disease were compared between subjects harbouring different A. actinomycetemcomitans genotypes. Results Eighty six subjects (19%) were positive for A. actinomycetemcomitans. The JP2 clone was not detected. Serotype c was the most prevalent (57%), followed by serotypes a (33%) and b (7%). Among A. actinomycetemcomitans-positive subjects, 27% were positive for cdtABC. All cdtABC-positive subjects possessed the SNP in the cdtB, which is involved with increased toxin activity. The presence of A. actinomycetemcomitans, but not a specific genotype, was significantly related to increased probing depth and periodontal attachment loss. Conclusions Our results confirm the previous findings that genotype distribution of A. actinomycetemcomitans varies between ethnic groups. However, no clear relationship between a specific genotype and periodontal conditions was observed.
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- 2012
6. Differential modulation of prM cleavage, extracellular particle distribution, and virus infectivity by conserved residues at nonfurin consensus positions of the dengue virus pr-M junction
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Sansanee Noisakran, Amornrat Kanjanahaluethai, Utaiwan Utaipat, Jiraphan Junjhon, Kridsada Chaichoun, Adisak Songjaeng, Nopporn Sittisombut, Poonsook Keelapang, Prakaimuk Saraithong, Sunpetchuda Supasa, Matthawee Lausumpao, Prida Malasit, Chunya Puttikhunt, and Watchara Kasinrerk
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Cleavage factor ,viruses ,Immunology ,Molecular Sequence Data ,Dengue virus ,Cleavage (embryo) ,medicine.disease_cause ,Microbiology ,Virus ,Cell Line ,Microscopy, Electron, Transmission ,Viral Envelope Proteins ,Virology ,Consensus sequence ,medicine ,Animals ,Point Mutation ,Amino Acid Sequence ,Furin ,Binding Sites ,biology ,Virus Assembly ,Structure and Assembly ,Virion ,virus diseases ,Dengue Virus ,biology.organism_classification ,Molecular biology ,humanities ,Flavivirus ,Culicidae ,Viral replication ,Amino Acid Substitution ,Insect Science ,biology.protein ,Mutagenesis, Site-Directed - Abstract
In the generation of flavivirus particles, an internal cleavage of the envelope glycoprotein prM by furin is required for the acquisition of infectivity. Unlike cleavage of the prM of other flaviviruses, cleavage of dengue virus prM is incomplete in many cell lines; the partial cleavage reflects the influence of residues at furin nonconsensus positions of the pr-M junction, as flaviviruses share basic residues at positions P1, P2, and P4, recognized by furin. In this study, viruses harboring the alanine-scanning and other multiple-point mutations of the pr-M junction were generated, employing a dengue virus background that exhibited 60 to 70% prM cleavage and a preponderance of virion-sized extracellular particles. Analysis of prM and its cleavage products in viable mutants revealed a cleavage-suppressive effect at the conserved P3 Glu residue, as well as the cleavage-augmenting effects at the P5 Arg and P6 His residues, indicating an interplay between opposing modulatory influences mediated by these residues on the cleavage of the pr-M junction. Changes in the prM cleavage level were associated with altered proportions of extracellular virions and subviral particles; mutants with reduced cleavage were enriched with subviral particles and prM-containing virions, whereas the mutant with enhanced cleavage was deprived of these particles. Alterations of virus multiplication were detected in mutants with reduced prM cleavage and were correlated with their low specific infectivities. These findings define the functional roles of charged residues located adjacent to the furin consensus sequence in the cleavage of dengue virus prM and provide plausible mechanisms by which the reduction in the pr-M junction cleavability may affect virus replication.
- Published
- 2008
7. Oral Mucositis and Microbial Colonization in Saliva
- Author
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Rebeca Vasconcelos, Yihong Li, Erica Queiroz, Kira Nightingale, Alexander Ross Kerr, Nicholas J. Sanfilippo, C. Howard, Benjamin Smith, Patricia Corby, and Prakaimuk Saraithong
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Saliva ,business.industry ,Mucositis ,Medicine ,Microbial colonization ,Radiology, Nuclear Medicine and imaging ,Dentistry (miscellaneous) ,Surgery ,Oral Surgery ,business ,medicine.disease ,Pathology and Forensic Medicine ,Microbiology - Published
- 2015
- Full Text
- View/download PDF
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